Cp4.1LG10g04840 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATGTGTGTATATATATGTGTGGGGGTTATTTAGAGGGAAATAAATGTTCCAACCCAACATATCGACATCAGTTACCTCGCAACTTATTGCTGTAAGGATGGCGACGGTTTGAATGTCCAAAAGCTGAAAAAGAATACATGCAATAATCACAAAATAATATTCCCATTTCTCCTCTCTTCATCACTGCTTCTTGTTGTTCTCCATCTTCCGCCATGGAAATGAGCTTTAGGATCACTGTGTTCTTCCTCTTCCTTCTGCTTACCCCTTCATTATGTTGTTGTTCTTCAAATGAAGGTGTGTGTGTAATTTGTGTATGATGGGTGTTACACAAATATAATGGTTGATTTAATTTTAATTTGTAGGTGGATCTGAAAATGGTGGCATGGGTTCTTCGTCAGAGGTTTATGAAATAGACTACAGAGGACCAGAGACTCACTCCTCTCATATTTCTCCTCCCCATCCCTCCCATGGAAGGCCATGGATTGTTCATCATCACCATCCTCTCCACCCTCCTCCATACCCACTCAAGGTCATTTTATTACTTATCAATCTTTTTTCTTTTTACGATTTTGTTTGTGACGATAAATATCATTCTTTCGGAGTGATGTACGAGTTAGGGTTTTGTTTATCTAGCTAGAGTAA ATGGGTGGATCTGAAAATGGTGGCATGGGTTCTTCGTCAGAGGTTTATGAAATAGACTACAGAGGACCAGAGACTCACTCCTCTCATATTTCTCCTCCCCATCCCTCCCATGGAAGGCCATGGATTGTTCATCATCACCATCCTCTCCACCCTCCTCCATACCCACTCAAGCTAGAGTAA ATGGGTGGATCTGAAAATGGTGGCATGGGTTCTTCGTCAGAGGTTTATGAAATAGACTACAGAGGACCAGAGACTCACTCCTCTCATATTTCTCCTCCCCATCCCTCCCATGGAAGGCCATGGATTGTTCATCATCACCATCCTCTCCACCCTCCTCCATACCCACTCAAGCTAGAGTAA MGGSENGGMGSSSEVYEIDYRGPETHSSHISPPHPSHGRPWIVHHHHPLHPPPYPLKLE Homology
BLAST of Cp4.1LG10g04840 vs. NCBI nr
Match: XP_023543089.1 (uncharacterized protein LOC111803061 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 121 bits (304), Expect = 2.45e-34 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of Cp4.1LG10g04840 vs. NCBI nr
Match: XP_022925989.1 (uncharacterized protein LOC111433241 [Cucurbita moschata] >KAG7034582.1 hypothetical protein SDJN02_04312 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 115 bits (287), Expect = 9.60e-32 Identity = 54/56 (96.43%), Postives = 54/56 (96.43%), Query Frame = 0
BLAST of Cp4.1LG10g04840 vs. NCBI nr
Match: KAG6604438.1 (hypothetical protein SDJN03_05047, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 115 bits (287), Expect = 9.60e-32 Identity = 54/56 (96.43%), Postives = 54/56 (96.43%), Query Frame = 0
BLAST of Cp4.1LG10g04840 vs. NCBI nr
Match: XP_022979166.1 (uncharacterized protein LOC111478885 [Cucurbita maxima]) HSP 1 Score: 113 bits (283), Expect = 3.80e-31 Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of Cp4.1LG10g04840 vs. NCBI nr
Match: XP_022143835.1 (uncharacterized protein LOC111013652 [Momordica charantia]) HSP 1 Score: 79.0 bits (193), Expect = 2.39e-17 Identity = 40/50 (80.00%), Postives = 41/50 (82.00%), Query Frame = 0
BLAST of Cp4.1LG10g04840 vs. ExPASy TrEMBL
Match: A0A6J1EDR4 (uncharacterized protein LOC111433241 OS=Cucurbita moschata OX=3662 GN=LOC111433241 PE=4 SV=1) HSP 1 Score: 115 bits (287), Expect = 4.65e-32 Identity = 54/56 (96.43%), Postives = 54/56 (96.43%), Query Frame = 0
BLAST of Cp4.1LG10g04840 vs. ExPASy TrEMBL
Match: A0A6J1IQ06 (uncharacterized protein LOC111478885 OS=Cucurbita maxima OX=3661 GN=LOC111478885 PE=4 SV=1) HSP 1 Score: 113 bits (283), Expect = 1.84e-31 Identity = 53/56 (94.64%), Postives = 55/56 (98.21%), Query Frame = 0
BLAST of Cp4.1LG10g04840 vs. ExPASy TrEMBL
Match: A0A6J1CPX6 (uncharacterized protein LOC111013652 OS=Momordica charantia OX=3673 GN=LOC111013652 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.16e-17 Identity = 40/50 (80.00%), Postives = 41/50 (82.00%), Query Frame = 0
BLAST of Cp4.1LG10g04840 vs. ExPASy TrEMBL
Match: A0A0A0KIB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G444970 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 2.66e-11 Identity = 38/59 (64.41%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of Cp4.1LG10g04840 vs. ExPASy TrEMBL
Match: A0A5A7U1B9 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00720 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.94e-10 Identity = 30/35 (85.71%), Postives = 31/35 (88.57%), Query Frame = 0
BLAST of Cp4.1LG10g04840 vs. TAIR 10
Match: AT5G03120.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 14 Blast hits to 14 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 1.8e-05 Identity = 23/40 (57.50%), Postives = 28/40 (70.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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