Cp4.1LG10g04060 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g04060
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Auxin responsive SAUR protein
Location	Cp4.1LG10: 1700978 .. 1703217 (+)
RNA-Seq Expression	Cp4.1LG10g04060
Synteny	Cp4.1LG10g04060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCGGAGAAATGCTAGGCAAGAAAATGGTTTCCTTCAAGAAACTCGCTAAGAAAGTGAAGGTCCGAGTCGGGACGGAGGGTGAAGCATCGTACAACGAATGTTTGCTCAGAGATCAACTGGAACCACCGGAGGATCACGATTCTCAGTCGCCTTCGTCGACTCCGACTGGCTCGTTCGCGATTTACGTCGGCGATGAACGGCAGCGCTTCGTTGTGCCGACGAGTTTCTTGTCGCATCCGCTCTTTAGGATGCTGCTCGATAAAGCGTACAGAGAGTTCGGATTCGAGCAGAGGAATGCGCTTATGGTTCCTTGTAGCGTCTCTGCTTTTCAAGAAATTGTGAGCGCGGTCGAATGCTGCAATGGCAGATTCGATTTCGGCGAGCTTGTTGAGGAGTTTTTGTAGAACAGACGAAATGCAGAGGAATATCCGTTCGCTAGGGTTTGTATCGTTTGATCCGTTCGGTAGTGAAATTCGTCGTCGATTTCTGTTGAAAGAAACCGAGGAGGATACGATTCGATTGAATTCAGCCGATTTTTACTGTTCGATTGGGTGCAGAATGTGAATCTCTTCATCTCAAAATTCAAATTCATGCCCAATTCGATTCTCGATGTTCCATTTTTCTTGGGAAGTTGTAAAATCAGAGCCGTAATTCTGCGATCAAAGTGTCATTGTAGTTGTAATTAATATGTATGAATGACAGTTGTGTTTTGGTAATTAATTTGTCAAAGTTCTTAGATACTTTTTCATGGCAGCTGGCATTAGCTACTAAGCAAAGATCACAAGGAATGAACAAGAAATGATTATTTTTCTATTCCCATTTTTTGGCTGATTATATAACTTTTCAGCGACGCTAACATTTTTTTTTAGCTCCATTCTTAATATTTTAAGACCTTTCATTTTCATCATATTAAATAATAATAATAATAATAATAATAATTTATAAAACTTTTGTCTTTTATCGGGAAAAAATACTTTAACTTCATACTGGCTAGTTTCTACTTAGATAGAATAATAATACAATTTTTTTTTTTAATTTACCTTTTAGAAGAAATATATATTTTTTTTTTTAAAGTAATGACAATAGTTTACAATGATATTTTTATATTTTAATTTTAAGAAAATAATACTTGAAAAAATACCAAATTTATGCATTTTACAAACCTAAACATCGTTTTTCAAAAAATACTTTATGAAATAAGAAAATCAAATTATTTGTATTTTGTGTGTGTGTGTAAATATAGATATTCAGTATTTAGTTGATGAAATAAATAGCGAGTAAAATAGAAACATAATTGAAAGTATTTTAAGATTTAAATAGCAACAGACATAATCACATCCCAATTTAGAGGATTAGTTCCTAATACAAATATTTTTTAGAAATAGAGGGAGACAAAATGAGGTGTGCTGGATGCCGGTTGCCGGTTGCCGGTTGCCGGTTATGGAATTTTGTGTGTGGAGAAAAAGTCAAAGTGCAATGAACCAAGAAGCAAGTAGGAATCAAATCCATGGATGAAAAAGTGTGTAATTTTATGAGAGTTTTATGTTTGTTTCCAAATTTCAAAGAAATCTTTTGTAATTNTCGATGAGTAACCGTCAAAGTCAAAAATCCTTTTATTTTTATTTTTATTTTTATTTATTTATTATTATTTTTGTATTTTTATAATAATTAAAATCCCTTTTATTCGTCTCCTTCTTCCCCGACCCGCCTGCTCCATTCTAGTATAAAATCCTTTTTCAGACCCTCCATTTCTCCATGCCCATGGATCCATAGCTTCATCTTCAAAAACCCTAGCCTACTCGCCTCTGCAATTTTTCCTTCCATTTTCCTGCAGATCGGAGAAATGCTAGGCAAGAAAATGGTTTCCTTCAAGAAACTCGCTAAGAAAGTGAAGGTCCGAGTCGGGACGGAGGGTGAAGCATCGTACAACGAATGTTTGCTCAGAGATCAACTGGAACCACCGGAGGATCACGATTCTCAGTCGCCTTCGTCGACTCCGACTGGCTCGTTCGCGATTTACGTCGGCGATGAACGGCAGCGCTTCGTTGTGCCGACGAGTTTCTTGTCGCATCCGCTCTTTAGGATGCTGCTCGATAAAGCGTACAGAGAGTTCGGATTCGAGCAGAGGAATGCGCTTATGGTTCCTTGTAGCGTCTCTGCTTTTCAAGAAATTGTGAGCGCGGTCGAATGCTGCAATGGCAGATTCGATTTCGGCGAGCTTGTTGAGGAGTTTTTGTAG

mRNA sequence

ATCGGAGAAATGCTAGGCAAGAAAATGGTTTCCTTCAAGAAACTCGCTAAGAAAGTGAAGGTCCGAGTCGGGACGGAGGGTGAAGCATCGTACAACGAATGTTTGCTCAGAGATCAACTGGAACCACCGGAGGATCACGATTCTCAGTCGCCTTCGTCGACTCCGACTGGCTCGTTCGCGATTTACGTCGGCGATGAACGGCAGCGCTTCGTTGTGCCGACGAGTTTCTTGTCGCATCCGCTCTTTAGGATGCTGCTCGATAAAGCGTACAGAGAGTTCGGATTCGAGCAGAGGAATGCGCTTATGGTTCCTTGTAGCGTCTCTGCTTTTCAAGAAATTGTGAGCGCGGTCGAATGCTGCAATGGCAGATTCGATTTCGGCGAGCTTAAACTCGCTAAGAAAGTGAAGGTCCGAGTCGGGACGGAGGGTGAAGCATCGTACAACGAATGTTTGCTCAGAGATCAACTGGAACCACCGGAGGATCACGATTCTCAGTCGCCTTCGTCGACTCCGACTGGCTCGTTCGCGATTTACGTCGGCGATGAACGGCAGCGCTTCGTTGTGCCGACGAGTTTCTTGTCGCATCCGCTCTTTAGGATGCTGCTCGATAAAGCGTACAGAGAGTTCGGATTCGAGCAGAGGAATGCGCTTATGGTTCCTTGTAGCGTCTCTGCTTTTCAAGAAATTGTGAGCGCGGTCGAATGCTGCAATGGCAGATTCGATTTCGGCGAGCTTGTTGAGGAGTTTTTGTAG

Coding sequence (CDS)

ATCGGAGAAATGCTAGGCAAGAAAATGGTTTCCTTCAAGAAACTCGCTAAGAAAGTGAAGGTCCGAGTCGGGACGGAGGGTGAAGCATCGTACAACGAATGTTTGCTCAGAGATCAACTGGAACCACCGGAGGATCACGATTCTCAGTCGCCTTCGTCGACTCCGACTGGCTCGTTCGCGATTTACGTCGGCGATGAACGGCAGCGCTTCGTTGTGCCGACGAGTTTCTTGTCGCATCCGCTCTTTAGGATGCTGCTCGATAAAGCGTACAGAGAGTTCGGATTCGAGCAGAGGAATGCGCTTATGGTTCCTTGTAGCGTCTCTGCTTTTCAAGAAATTGTGAGCGCGGTCGAATGCTGCAATGGCAGATTCGATTTCGGCGAGCTTAAACTCGCTAAGAAAGTGAAGGTCCGAGTCGGGACGGAGGGTGAAGCATCGTACAACGAATGTTTGCTCAGAGATCAACTGGAACCACCGGAGGATCACGATTCTCAGTCGCCTTCGTCGACTCCGACTGGCTCGTTCGCGATTTACGTCGGCGATGAACGGCAGCGCTTCGTTGTGCCGACGAGTTTCTTGTCGCATCCGCTCTTTAGGATGCTGCTCGATAAAGCGTACAGAGAGTTCGGATTCGAGCAGAGGAATGCGCTTATGGTTCCTTGTAGCGTCTCTGCTTTTCAAGAAATTGTGAGCGCGGTCGAATGCTGCAATGGCAGATTCGATTTCGGCGAGCTTGTTGAGGAGTTTTTGTAG

Protein sequence

IGEMLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNGRFDFGELKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNGRFDFGELVEEFL

Homology

[Close]

BLAST of Cp4.1LG10g04060 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-11
Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 51  PSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAF 110
           P   P G F +YVG+ R R++VP SFL+HP F+ LL +A  EFGF+    L +PC    F
Sbjct: 40  PLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVF 99

Query: 111 QEIVSAV 118
           Q + S +
Sbjct: 100 QTLTSMI 106

[Close]

BLAST of Cp4.1LG10g04060 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.1e-11
Identity = 29/66 (43.94%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 52  SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQ 111
           SS P G   +YVGDE +RFVV    L+HP+F  LL+++ +E+G+EQ+  L +PC V  F+
Sbjct: 48  SSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFE 107

Query: 112 EIVSAV 118
            I+ ++
Sbjct: 108 RIMESL 113

[Close]

BLAST of Cp4.1LG10g04060 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.0e-09
Identity = 25/66 (37.88%), Postives = 47/66 (71.21%), Query Frame = 0


Query: 52  SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQ 111
           SS P+G   + VG++++RFVV    L+HP+F  LL+++ +E+G+ Q+  L +PC+V  F+
Sbjct: 46  SSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFE 105

Query: 112 EIVSAV 118
           ++V ++
Sbjct: 106 QVVESL 111

[Close]

BLAST of Cp4.1LG10g04060 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.0e-09
Identity = 28/71 (39.44%), Postives = 40/71 (56.34%), Query Frame = 0


Query: 47  DSQSPSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCS 106
           DS  P+  P G F +YVG+ R R++VP S L HP F+ LL ++  EFGF     +++PC 
Sbjct: 32  DSGLPNDVPKGHFVVYVGERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGIIIPCQ 91

Query: 107 VSAFQEIVSAV 118
              F    S +
Sbjct: 92  EVDFLSFFSMI 102

[Close]

BLAST of Cp4.1LG10g04060 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-09
Identity = 30/83 (36.14%), Postives = 48/83 (57.83%), Query Frame = 0


Query: 35  LLRDQLEPPEDHDSQSPSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFG 94
           LLR + +       +  S  P G   +YVG E +RFVV    L+HP+F  LL ++ +E+G
Sbjct: 19  LLRSESQRGRTKKEKHKSWVPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYG 78

Query: 95  FEQRNALMVPCSVSAFQEIVSAV 118
           +EQ+  L +PC V  F+ I+ ++
Sbjct: 79  YEQQGVLRIPCHVLVFERILESL 101

[Close]

BLAST of Cp4.1LG10g04060 vs. NCBI nr
Match: KVI12028.1 (Auxin responsive SAUR protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 259 bits (662), Expect = 2.78e-83
Identity = 140/256 (54.69%), Postives = 180/256 (70.31%), Query Frame = 0


Query: 4   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPE-------DHDSQSPSSTPT 63
           MLGKK+ S K LAK V+VR G +  AS +E LLR   E  E         DS S S TPT
Sbjct: 1   MLGKKIGSVKNLAKMVRVRGGPD--ASQSEWLLRKGEEKEEVVCTNMSSSDSSSSSKTPT 60

Query: 64  GSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSA 123
           G F +Y+G+ER+RFV+P S+LSHPLF+M+L+K+  EFGF Q+N L+VPCSV+AFQE+VS 
Sbjct: 61  GFFTVYIGEERRRFVIPMSYLSHPLFKMMLEKSSEEFGFNQKNGLVVPCSVNAFQEVVSV 120

Query: 124 VECCNGRFDFGELK-LAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPS-STPTGS 183
           VE CNG+FD   L  LAKKVK     E + S  E LL+D  E        SP+   PTG 
Sbjct: 121 VESCNGKFDLSSLNDLAKKVKG--WGEPKPSQAEWLLKDNEEGVCLSSCSSPTCQAPTGF 180

Query: 184 FAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVE 243
           F +Y+GDE++RFVVP S+LSHPLF+M+L+K+  EFGF Q+N L++PCSV+AF+E+VS VE
Sbjct: 181 FTLYIGDEKRRFVVPMSYLSHPLFKMMLEKSSEEFGFNQKNGLVIPCSVNAFREMVSVVE 240

Query: 244 CCNGRFDFGELVEEFL 250
            CNG+FD   LV+EF+
Sbjct: 241 SCNGKFDLSHLVQEFI 252

[Close]

BLAST of Cp4.1LG10g04060 vs. NCBI nr
Match: XP_022925979.1 (auxin-induced protein 15A [Cucurbita moschata] >XP_023544813.1 auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo] >XP_023544814.1 auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254 bits (649), Expect = 4.52e-83
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 4   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSSTPTGSFAIYV 63
           MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSSTPTGSFAIYV
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSSTPTGSFAIYV 60

Query: 64  GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNGR 123
           GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNGR
Sbjct: 61  GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNGR 120

Query: 124 FDFGEL 129
           FDFGEL
Sbjct: 121 FDFGEL 126

[Close]

BLAST of Cp4.1LG10g04060 vs. NCBI nr
Match: KAG6604342.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034493.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 253 bits (646), Expect = 1.29e-82
Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 4   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSSTPTGSFAIYV 63
           MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSP+STPTGSFAIYV
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYV 60

Query: 64  GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNGR 123
           GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNGR
Sbjct: 61  GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNGR 120

Query: 124 FDFGEL 129
           FDFGEL
Sbjct: 121 FDFGEL 126

[Close]

BLAST of Cp4.1LG10g04060 vs. NCBI nr
Match: XP_022977936.1 (auxin-induced protein 15A-like [Cucurbita maxima])

HSP 1 Score: 249 bits (636), Expect = 4.29e-81
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 4   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSSTPTGSFAIYV 63
           MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPS+TPTGSFAIYV
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSTTPTGSFAIYV 60

Query: 64  GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNGR 123
           GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVEC NGR
Sbjct: 61  GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECSNGR 120

Query: 124 FDFGEL 129
           FDFGEL
Sbjct: 121 FDFGEL 126

[Close]

BLAST of Cp4.1LG10g04060 vs. NCBI nr
Match: KAF9680862.1 (hypothetical protein SADUNF_Sadunf06G0165700 [Salix dunnii])

HSP 1 Score: 239 bits (609), Expect = 7.87e-74
Identity = 154/372 (41.40%), Postives = 185/372 (49.73%), Query Frame = 0


Query: 4   MLGKKMVSFKKLAKKVKVRVGTEG-EASYNECLLRDQLEPPEDHDSQSPSSTPTGSFAIY 63
           M GKK+VSFKKLAKKVK     E  + S++ECLLR        H+     +TPTG FAIY
Sbjct: 1   MSGKKIVSFKKLAKKVKDFSRNEYCKQSHHECLLRG-------HNFDDAVTTPTGFFAIY 60

Query: 64  VGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNG 123
           VG+ER+RFV P   LSHPLF+MLL+K+Y EFGF+Q N L+VPC+VS FQE+++AVECCNG
Sbjct: 61  VGEERERFVAPIRCLSHPLFKMLLEKSYDEFGFQQGNGLVVPCNVSTFQEVLNAVECCNG 120

Query: 124 RFDFG------------------------------------------------------- 183
            FDFG                                                       
Sbjct: 121 GFDFGNSVEEFLSMREKESRNHPKPLFPNCIPSLAISIYPSVNFSLSCEDPFAPKIADPV 180

Query: 184 EL---------------------------------------------------------- 243
           EL                                                          
Sbjct: 181 ELLPSSPSQLLSLPSPLSTPSVTDRDCSGNSFRATRSEHHPTKEIGAGPARLSRTSQLEK 240

Query: 244 -----------KLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSSTPTGSFAIY 250
                      KLAKKV+     E + S+ ECLLR        H+      TPTG FAIY
Sbjct: 241 KMSGKKIVSFKKLAKKVRDISRNECKQSHRECLLRG-------HNFDDAVKTPTGFFAIY 300

[Close]

BLAST of Cp4.1LG10g04060 vs. ExPASy TrEMBL
Match: A0A118K7C5 (Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_009557 PE=3 SV=1)

HSP 1 Score: 259 bits (662), Expect = 1.35e-83
Identity = 140/256 (54.69%), Postives = 180/256 (70.31%), Query Frame = 0


Query: 4   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPE-------DHDSQSPSSTPT 63
           MLGKK+ S K LAK V+VR G +  AS +E LLR   E  E         DS S S TPT
Sbjct: 1   MLGKKIGSVKNLAKMVRVRGGPD--ASQSEWLLRKGEEKEEVVCTNMSSSDSSSSSKTPT 60

Query: 64  GSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSA 123
           G F +Y+G+ER+RFV+P S+LSHPLF+M+L+K+  EFGF Q+N L+VPCSV+AFQE+VS 
Sbjct: 61  GFFTVYIGEERRRFVIPMSYLSHPLFKMMLEKSSEEFGFNQKNGLVVPCSVNAFQEVVSV 120

Query: 124 VECCNGRFDFGELK-LAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPS-STPTGS 183
           VE CNG+FD   L  LAKKVK     E + S  E LL+D  E        SP+   PTG 
Sbjct: 121 VESCNGKFDLSSLNDLAKKVKG--WGEPKPSQAEWLLKDNEEGVCLSSCSSPTCQAPTGF 180

Query: 184 FAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVE 243
           F +Y+GDE++RFVVP S+LSHPLF+M+L+K+  EFGF Q+N L++PCSV+AF+E+VS VE
Sbjct: 181 FTLYIGDEKRRFVVPMSYLSHPLFKMMLEKSSEEFGFNQKNGLVIPCSVNAFREMVSVVE 240

Query: 244 CCNGRFDFGELVEEFL 250
            CNG+FD   LV+EF+
Sbjct: 241 SCNGKFDLSHLVQEFI 252

[Close]

BLAST of Cp4.1LG10g04060 vs. ExPASy TrEMBL
Match: A0A6J1EDQ2 (auxin-induced protein 15A OS=Cucurbita moschata OX=3662 GN=LOC111433233 PE=3 SV=1)

HSP 1 Score: 254 bits (649), Expect = 2.19e-83
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 4   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSSTPTGSFAIYV 63
           MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSSTPTGSFAIYV
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSSTPTGSFAIYV 60

Query: 64  GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNGR 123
           GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNGR
Sbjct: 61  GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNGR 120

Query: 124 FDFGEL 129
           FDFGEL
Sbjct: 121 FDFGEL 126

[Close]

BLAST of Cp4.1LG10g04060 vs. ExPASy TrEMBL
Match: A0A6J1ILC7 (auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111478079 PE=3 SV=1)

HSP 1 Score: 249 bits (636), Expect = 2.08e-81
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 4   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSSTPTGSFAIYV 63
           MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPS+TPTGSFAIYV
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSTTPTGSFAIYV 60

Query: 64  GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNGR 123
           GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVEC NGR
Sbjct: 61  GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECSNGR 120

Query: 124 FDFGEL 129
           FDFGEL
Sbjct: 121 FDFGEL 126

[Close]

BLAST of Cp4.1LG10g04060 vs. ExPASy TrEMBL
Match: A0A6N2N3E8 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS404841 PE=3 SV=1)

HSP 1 Score: 238 bits (608), Expect = 8.10e-74
Identity = 152/386 (39.38%), Postives = 187/386 (48.45%), Query Frame = 0


Query: 4   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSSTPTGSFAIYV 63
           M GKK+ SFK+LAKKVK     E + S+ ECLL+ Q       +     +TPTG FAIYV
Sbjct: 1   MSGKKIGSFKRLAKKVKDISRDECKQSHRECLLKGQ-------NFDDAVTTPTGFFAIYV 60

Query: 64  GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNGR 123
           G++R+RFVVPTS LSHPLF+MLL+K+Y EFGF+Q N L+VPC+VS FQE+++AVECCNG 
Sbjct: 61  GEDRERFVVPTSCLSHPLFKMLLEKSYDEFGFQQSNGLVVPCNVSTFQEVLNAVECCNGG 120

Query: 124 FDFGEL------------------------------------------------------ 183
           FDFG L                                                      
Sbjct: 121 FDFGNLVEDSKRSEDWTSKTSELLADVARFWDGCLIKCTNGSGCATTISRIQLWISQIIM 180

Query: 184 ------------------------------------------------------------ 243
                                                                       
Sbjct: 181 KSNHGPESIAPDIDLPNWVRCMLSAFPPTCPSPPRNTAIDRFSYGSHTIFYLSPISRSRF 240

Query: 244 -------------------------KLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDS 250
                                    KLAKKVK     E + S+ ECLLR        H+ 
Sbjct: 241 LFFIVDQEHHSLPKKMSGKKIVSFKKLAKKVKDISRNECKQSHRECLLRG-------HNF 300

[Close]

BLAST of Cp4.1LG10g04060 vs. ExPASy TrEMBL
Match: A0A6J1IC38 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111471159 PE=3 SV=1)

HSP 1 Score: 228 bits (581), Expect = 5.07e-73
Identity = 115/128 (89.84%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 4   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPS--STPTGSFAI 63
           MLGKKMVSFKKLAKKVKVRVGTEGE+S+NE LLRD+LE  +DHDS SPS  STPTGSFA+
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSHNEYLLRDRLESSKDHDSHSPSPTSTPTGSFAV 60

Query: 64  YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCN 123
           YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNAL+VPCSVSAFQEIVSAVECCN
Sbjct: 61  YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECCN 120

Query: 124 GRFDFGEL 129
           GRFDFGE+
Sbjct: 121 GRFDFGEI 128

[Close]

BLAST of Cp4.1LG10g04060 vs. TAIR 10
Match: AT2G36210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 140.2 bits (352), Expect = 2.3e-33
Identity = 76/133 (57.14%), Postives = 98/133 (73.68%), Query Frame = 0


Query: 4   MLGKKMVSFKKLAKKVK-----VRVGTEG--EASYNECLLRDQLEPPEDHDSQSPSSTPT 63
           MLGK++ SFK LAKK+K      R G EG  E++YNE LL ++     D  +   S TPT
Sbjct: 1   MLGKRIASFKNLAKKMKSINTTTRSGGEGGSESTYNESLLMNE----ADEAAMMASKTPT 60

Query: 64  GSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREF-GFEQRNALMVPCSVSAFQEIVS 123
           G+FA+YVG+ER + VVPTS+L+HPLFRMLLDK++ EF  FEQ+  L+VPCS+S FQ++V+
Sbjct: 61  GTFAVYVGEERVKRVVPTSYLNHPLFRMLLDKSHDEFLCFEQKVMLVVPCSLSVFQDVVN 120

Query: 124 AVECCNGRFDFGE 129
           AVE CNG FDFGE
Sbjct: 121 AVESCNGNFDFGE 129

[Close]

BLAST of Cp4.1LG10g04060 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 83.6 bits (205), Expect = 2.5e-16
Identity = 34/70 (48.57%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 49  QSPSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVS 108
           + P   P G+ A+YVG E +RF++PTS+LSH LF++LL+KA  EFGF+Q  AL +PC V 
Sbjct: 74  EPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVE 133

Query: 109 AFQEIVSAVE 119
            F+ ++  +E
Sbjct: 134 TFKYLLKCME 143

[Close]

BLAST of Cp4.1LG10g04060 vs. TAIR 10
Match: AT5G20810.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 83.6 bits (205), Expect = 2.5e-16
Identity = 34/70 (48.57%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 49  QSPSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVS 108
           + P   P G+ A+YVG E +RF++PTS+LSH LF++LL+KA  EFGF+Q  AL +PC V 
Sbjct: 74  EPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVE 133

Query: 109 AFQEIVSAVE 119
            F+ ++  +E
Sbjct: 134 TFKYLLKCME 143

[Close]

BLAST of Cp4.1LG10g04060 vs. TAIR 10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 80.1 bits (196), Expect = 2.8e-15
Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 49  QSPSSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVS 108
           + P   P G  A+YVG E +RF++PT+FLSH LF++LL+KA  E+GF+   AL +PC V 
Sbjct: 74  EPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEVE 133

Query: 109 AFQEIVSAVE 119
            F+ ++  +E
Sbjct: 134 TFKYLLKCIE 143

[Close]

BLAST of Cp4.1LG10g04060 vs. TAIR 10
Match: AT5G66260.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 73.9 bits (180), Expect = 2.0e-13
Identity = 30/66 (45.45%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 52  SSTPTGSFAIYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQ 111
           +  P G F +YVG  R R V+P SFL+HP+F+MLL ++  EFGF Q N L +PC    F+
Sbjct: 32  NGVPKGHFVVYVGHSRSRHVIPISFLTHPIFQMLLQQSEEEFGFFQDNGLTIPCDEHFFR 91

Query: 112 EIVSAV 118
            ++S++
Sbjct: 92  ALISSI 97

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g04060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	1.1e-11	44.78	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9LTV3	3.1e-11	43.94	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 S...	[more]
O64538	1.0e-09	37.88	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]
P0DKL1	1.0e-09	39.44	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
Q9SGU2	1.3e-09	36.14	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]

BLAST of Cp4.1LG10g04060 vs. NCBI nr


Match Name	E-value	Identity	Description
KVI12028.1	2.78e-83	54.69	Auxin responsive SAUR protein [Cynara cardunculus var. scolymus]	[more]
XP_022925979.1	4.52e-83	100.00	auxin-induced protein 15A [Cucurbita moschata] >XP_023544813.1 auxin-induced pro...	[more]
KAG6604342.1	1.29e-82	99.21	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
XP_022977936.1	4.29e-81	98.41	auxin-induced protein 15A-like [Cucurbita maxima]	[more]
KAF9680862.1	7.87e-74	41.40	hypothetical protein SADUNF_Sadunf06G0165700 [Salix dunnii]	[more]

BLAST of Cp4.1LG10g04060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A118K7C5	1.35e-83	54.69	Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Cc...	[more]
A0A6J1EDQ2	2.19e-83	100.00	auxin-induced protein 15A OS=Cucurbita moschata OX=3662 GN=LOC111433233 PE=3 SV=...	[more]
A0A6J1ILC7	2.08e-81	98.41	auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111478079 PE=3 ...	[more]
A0A6N2N3E8	8.10e-74	39.38	Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS404841 PE=3 SV=...	[more]
A0A6J1IC38	5.07e-73	89.84	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111471159...	[more]

BLAST of Cp4.1LG10g04060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36210.1	2.3e-33	57.14	SAUR-like auxin-responsive protein family	[more]
AT5G20810.1	2.5e-16	48.57	SAUR-like auxin-responsive protein family	[more]
AT5G20810.2	2.5e-16	48.57	SAUR-like auxin-responsive protein family	[more]
AT3G43120.1	2.8e-15	45.71	SAUR-like auxin-responsive protein family	[more]
AT5G66260.1	2.0e-13	45.45	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 162..232 e-value: 5.1E-24 score: 84.3 coord: 39..116 e-value: 3.5E-24 score: 84.8
None	No IPR available	PANTHER	PTHR31374:SF28	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY	coord: 130..250
None	No IPR available	PANTHER	PTHR31374:SF28	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY	coord: 4..129
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 130..250
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 4..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g04060.1	Cp4.1LG10g04060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin