Cp4.1LG10g02570 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAATAACAATAAAAATAAAAATAAAAATAAAAATAATATACCCTCAAGCTTGGAAATCCCAGATTCTTGCGAGAAGCGAAGCGCGCGAGGTGCACCTCCAAATGGGAGAAGCGAAGCGCGCGAGGTGTGTATTCAGGAAAGAAAGACTTCAGCCCTAAAGCTTGGAAGCAGTTTGGCGAGAGCGCTGTGCTGCCCGCAGCGACCATGGCAATTGATGCAATCGAAAACCTCTCGCCTCCCTCTCGCCCATCTTTCAATTTCAGGTACTGGTATAGCTTCCTCCATCCTTTGTATTATGCTATCTCGTGTTTCTATATTCATCGATCCTCGTTTTGTTTCACTTTCTCAGTCTGCCCACTTTTATGTTGCCGTTGACAGGCTCTAGTTTAAGATAGTCGCCTTCTCTCTATCTATGCTCGTACACATTTCTGGGATTCCACTGTAATGTTTGGTTGATATTTTTGTAGACTTGTACTTTGTTTGGCAGGAAATGTTGGTGGGTTTGTTGGACGCGGCCGGTCGCCGTCCGTCCTTGCGGATGATCGTGCTCTGCAGTTCTCGCGACGAGATCGACGCTATCTGCTCCTCCGTCTCCAACCTCCAATACATCTCTTTGGCCTCTTTGGTATGTTTATTTTTGCTCAATAAAAGCTCTTCCAAGTGAAATTCGGGAAATTGGTCTAGAAATGCTCAAGCCTGAGCCTGATGGATGCATTCTTTTGCGCCACTTAACGAATAATTTAATCTCGGAGTTACGACTTGCCTGAATTGATCTTCAATGTATGAATTGTCAATATGATAGGACGCTCGGATCAGGAGTCATGACATTATCTTGAACAGGATCAGCTCTTTGGGTTGTATTGTCCATCCGGGTCCTAGTTCTATGGATGAGATGCTTTGATTGGTAGAGTGCTATCAATATAATGGCAATCGCTTACATTAATACGCTTGACCTTATTTTATTGTATTTCAGTTGATAAAGGAAACCAAGTGGTGAAACTAACCATTACGGATGGTAATTGTGCCATGTGGAACAATATCAATTCTGGGCAATCGCTCACATTAACTCTGGGCAAGTGTTGATTGAATATCAATTGACTGGATGACAAGGTCACCCTATACAATTTATTGTTTTCAGTATCCTCCATCTTCCAGTTTTTGAATACTGCTATATCGTTTTGACCCTGTGTGGGTCAGTTGTTTTCTGTCATTTGTTCACTTACTTTTACTTTATGGTTAATACGGTCTTAGGAACAAGTTTGCGTAAACTTATTTGTGCAAGGGAAAATTACCCCTTCTCATTTAAATCTTACACTGAGTACATTTTGTCTTCTTCCTTCTTGTCAATACGTTACTCATGTTGGCATACATATGGGGTAGCAACCATGCTTTGAATGGATAAGCCTTACTTTTTGACTTATATTGATGCTGTGTATTTATTGCTTGTCATCTTCAGTACAGTGACCTTGCTGAAGCAGACCGAGCACTGATTTTAGAGAAATTTCAGAAAACAACATGAAGGTGGAGCCAAAAGTTCAGATCTCTATTAGAAGACAAATGTGAGGTTGAGAAAGTTGGAGAAAATCTCACATGATTGCAGACGCCTGCCTTCCACTTCTGGCTTATGTGGAGTCACCTCTTTCTGCCCTACCAACAAAGAAGTTGATATTGTCCGCTTTGACCTGTTACGTATAGTCGTCAGGTTCACGGTTTTAAAACGCGTGTACTAGGAATAGGTTTCCACACCCTTATAAGGAATGTTTCATTCCCCTCTCCCACCGATGTGGGATTTCACAATCCAACCTCCTTGGGGGCCAGTGTCCTCGCTGGCACACCGCCCGGTGTTTGGCTTTGATACCATTTGTATCAACCCAAACCTGCCGCTAATAGATATTGTCCATTTTGGCTCATTATGTATCACCGTCAGATTCACGGTAAAACGCGTTTGCTAGAGAGAGGTTTCCACACCCTTATAAAAGAGTGTTTCGTTCCCATCTCCAACCGATGTGGGATCTTCCAGAAGGTGTAGTTTTCAGACTACAGGATCTTGAGCTGATAATTTGTAAAAATGTGCCTCGGACTATATCAATGGGTAAGACGCCTGCCTTCCTCTTCCTGTTTTGATGTGGTACTGATCATTCTTTAAGCAAACTCCTAAAACTAGACATTTGAAAAGTTGTCTGAAGTGAATTCGTAAGCAGATTTTGATTATTGTGACAAATTCATTGTTTCTAAACTTCATGTCATTTTTATTGCAGGAAACGTATACGAGGCGCATGACTACCTGCTCAACCTCAGGTTATTCTTTTATACTGCCAAGGATTATAATATGAGTTGCTTGCGCAGTTTAGTTTTCTTCATACACAAGAGTTGCTTCCTTAGCGATTCTACGTAGATGGGATCTTAATCAACATGGTTGTTGGGGGTGAAGTGGTAACACTCGAAAGCATTGAAGGAAGTAGTGGGCTTGTTATTGCTTAGATGCCCGTTAATGTAAGTGTTTTACTACTTTCTTTGATCTTCATGCGCATTGATGGATATAAATTTTGCCAAGGAAACCAGTCCCAAATAATTATTCCTGAATTTTAGTTGGCCTTTTTCCTATAGAACAAAAAAGTCGCATCCTAGTGTCGCTTCTTTGTTTTATTTACAATTGCTGAACTTGGAAAGAGACCGTGTTGCAGATTTCTGAAATTTGTGAGGATGTCTGCTATGATGGAACACCTTCTGAGGACAACGCAGAAGGTTTTCCTGTTGTACCATCTTTTGGCCCATAACACTGGATTACAATGGCCGGGAAATACGTTATCCTGTGCTTGATAAGGTGTTTAGCTACCAATTTAGCATTTCAACTATAAAGTATGTTGGTTGATTTGTACCTAGGAGAGAGCTTTCCAGTTTAGTTTAGTAAACACGGGCTATTGCCATATGAATGGAATGCTGAGATATGTGGTGTTTTATGATTTTGGGTCATTTTTCTTTCCTGATAAAAATTTAGCAAGTGAAAAGGTAACCGTGATGAAGTAATAGTTCACAAAACACCACTTGATTTGTTTCACAGAGTATAACTTAACTAGTTTTAAAATATAATATCTACCTAAAGTCAATTTTGAATCTCGAGAAATTTGAAGATCAGTACCAATGTTATAAGGTATATTTTTTTATCTGAATTAACTCCATAGGTCAGATTCATGGGTTCAAATTTTGTTAAGTAACATCTAATAGAAGAAAACTTTAGTTTAATTACAATTACCTAGTACAAAGTTAAATAAGTTAAATGTAGGTAGATGAAATAATACGCATTCCCATTGAATTTTACGATGCTAATGTTGTACTAAGCTGTATCTTCACTCAATTAGTCTCTCTAATAAACCCTAAATTATAGGGAGATGGTCTTTTTTTTTATGGGTTGGAAACAAAATCATCCCACAAACAAACATAAAAAGAAGAGCCAAAATTTGATAGAGTATGTAATGTGCCTTGTGTAGACCAGTTGTAATATGTTGACCCGATCTCCACGTCGCCCCTCAGTATTAATAGCAATAACACAGTCTCTTAAGCCTTAACCCATGTGAGTGACAACCGAGAACCGACAACCATATGTCGTCTACCACCATTTTTTGGTAAAAAGATCATTAAAATCTCTGTCACATGCGAAACACGCTATAAGCTAGAGAATGCTACATGCTTTACTGGGGAAACTCTTAATTAATTGTAACAAACAAATAATCAAGGCTAATATAGAAATCCGTGGCCTTTATATGAAAAAAAGCAGGGCTTTATTTCAGTGAGCTGCTGATTTGTTTAGTCGAAAGAGAAGCCAAGTAGGGGGCTGTCTGGTTAATTAAATGTGACTTGTATTAAAAAGAAAGCAATGTCCTTCCACATGGTCCATTGGCATGGCCAGCTCATTCTCTGTTATTTCAACCTGCCAGTCAAAATCTCATATCCATCTACCTCATTAGATTCTCTCTTTAATGTTGTTTTTAATTTTGCTGCGGCCTAAACAAGTTTGATAAATAAAGGAAAGTAAGGTGAATAGTGGATGTGGTTGGATCCAGCGATGGGCGACGTATAAATACAAGAAGAGAACACAGGCTGCAAGCATGCATGTTATCTCCCCTGCCCTTTCTGATCTCTCTGTGAGAGTACCAAATGGCTTGCTTGGACTCGTACAAGAGCCCAGATCAGAAGGGACACTACCCGCCGATGAGCCCAAGACTGTCCTTTTCCAATGACTTCGTCGAATCCCATCACCCCACCAACACCAACACCAACACCCATATCAGTCAACATCAAAACAGCCCTCCAAATATTTCGGCCTCCGACGACTTCGAATTCTCTGCACTCACCAATCCCAGTAATCACACAATGACCGCCGCCGACGAGCTCTTCTTCAAGGGGAAATTGTTGCCCACTCTCAGAGATGAGCTTCTCCTTCACGACGACGACGACGACGCTATTGTAGTGCCGTCGTTCGTGCCCCCGAAAGGCCTACCAAAATGGAAAGAGTTTCTCAGCCTCAAGAGATCGGTTGTTGATGGGCGCTGCACGGGCACGGGCACCGACAACGACAACAATCAAGGCAAAATGCCCAAGTTGGCCCTCCATGATAAGTCATCGCATCTTGACATGACTTCGTAG AAAATAACAATAAAAATAAAAATAAAAATAAAAATAATATACCCTCAAGCTTGGAAATCCCAGATTCTTGCGAGAAGCGAAGCGCGCGAGGTGCACCTCCAAATGGGAGAAGCGAAGCGCGCGAGGTGTGTATTCAGGAAAGAAAGACTTCAGCCCTAAAGCTTGGAAGCAGTTTGGCGAGAGCGCTGTGCTGCCCGCAGCGACCATGGCAATTGATGCAATCGAAAACCTCTCGCCTCCCTCTCGCCCATCTTTCAATTTCAGGAAATGTTGGTGGGTTTGTTGGACGCGGCCGGTCGCCGTCCGTCCTTGCGGATGATCGTGCTCTGCAGTTCTCGCGACGAGATCGACGCTATCTGCTCCTCCGTCTCCAACCTCCAATACATCTCTTTGGCCTCTTTGGACGCTCGGATCAGGAGTCATGACATTATCTTGAACAGGATCAGCTCTTTGGGTTGTATTGTCCATCCGGGTCCTAGTTCTATGGATGAGATGCTTTGATTGGTAGAGTGCTATCAATATAATGGCAATCGCTTACATTAATACGCTTGACCTTATTTTATTGTATTTCAGTTGATAAAGGAAACCAAGTGGTGAAACTAACCATTACGGATGGTAATTGTGCCATGTGGAACAATATCAATTCTGGGCAATCGCTCACATTAACTCTGGGCAAGTGTTGATTGAATATCAATTGACTGGATGACAAGTACAGTGACCTTGCTGAAGCAGACCGAGCACTGATTTTAGAGAAATTTCAGAAAACAACATGAAGGTGGAGCCAAAAGTTCAGATCTCTATTAGAAGACAAATGTGAGGTTGAGAAAGTTGGAGAAAATCTCACATGATTGCAGACGCCTGCCTTCCACTTCTGGCTTATGTGGAGTCACCTCTTTCTGCCCTACCAACAAAGAAGTTGATATTGTCCGCTTTGACCTGTTACGTATAGTCGTCAGGTTCACGGTTTTAAAACGCGTGTACTAGGAATAGGTTTCCACACCCTTATAAGGAATGTTTCATTCCCCTCTCCCACCGATGTGGGATTTCACAATCCAACCTCCTTGGGGGCCAGTGTCCTCGCTGGCACACCGCCCGGTGTTTGGCTTTGATACCATTTGTATCAACCCAAACCTGCCGCTAATAGATATTGTCCATTTTGGCTCATTATGTATCACCGTCAGATTCACGGTAAAACGCGTTTGCTAGAGAGAGGTTTCCACACCCTTATAAAAGAGTGTTTCGTTCCCATCTCCAACCGATGTGGGATCTTCCAGAAGGTGTAGTTTTCAGACTACAGGATCTTGAGCTGATAATTTGTAAAAATGTGCCTCGGACTATATCAATGGGAAACGTATACGAGGCGCATGACTACCTGCTCAACCTCAGGTTATTCTTTTATACTGCCAAGGATTATAATATGAGTTGCTTGCGCAATGGGATCTTAATCAACATGGTTGTTGGGGGTGAAGTGGTAACACTCGAAAGCATTGAAGGAAGTAGTGGGCTTTACCAAATGGCTTGCTTGGACTCGTACAAGAGCCCAGATCAGAAGGGACACTACCCGCCGATGAGCCCAAGACTGTCCTTTTCCAATGACTTCGTCGAATCCCATCACCCCACCAACACCAACACCAACACCCATATCAGTCAACATCAAAACAGCCCTCCAAATATTTCGGCCTCCGACGACTTCGAATTCTCTGCACTCACCAATCCCAGTAATCACACAATGACCGCCGCCGACGAGCTCTTCTTCAAGGGGAAATTGTTGCCCACTCTCAGAGATGAGCTTCTCCTTCACGACGACGACGACGACGCTATTGTAGTGCCGTCGTTCGTGCCCCCGAAAGGCCTACCAAAATGGAAAGAGTTTCTCAGCCTCAAGAGATCGGTTGTTGATGGGCGCTGCACGGGCACGGGCACCGACAACGACAACAATCAAGGCAAAATGCCCAAGTTGGCCCTCCATGATAAGTCATCGCATCTTGACATGACTTCGTAG ATGTGGGATCTTCCAGAAGGTGTAGTTTTCAGACTACAGGATCTTGAGCTGATAATTTGTAAAAATGTGCCTCGGACTATATCAATGGGAAACGTATACGAGGCGCATGACTACCTGCTCAACCTCAGGTTATTCTTTTATACTGCCAAGGATTATAATATGAGTTGCTTGCGCAATGGGATCTTAATCAACATGGTTGTTGGGGGTGAAGTGGTAACACTCGAAAGCATTGAAGGAAGTAGTGGGCTTTACCAAATGGCTTGCTTGGACTCGTACAAGAGCCCAGATCAGAAGGGACACTACCCGCCGATGAGCCCAAGACTGTCCTTTTCCAATGACTTCGTCGAATCCCATCACCCCACCAACACCAACACCAACACCCATATCAGTCAACATCAAAACAGCCCTCCAAATATTTCGGCCTCCGACGACTTCGAATTCTCTGCACTCACCAATCCCAGTAATCACACAATGACCGCCGCCGACGAGCTCTTCTTCAAGGGGAAATTGTTGCCCACTCTCAGAGATGAGCTTCTCCTTCACGACGACGACGACGACGCTATTGTAGTGCCGTCGTTCGTGCCCCCGAAAGGCCTACCAAAATGGAAAGAGTTTCTCAGCCTCAAGAGATCGGTTGTTGATGGGCGCTGCACGGGCACGGGCACCGACAACGACAACAATCAAGGCAAAATGCCCAAGTTGGCCCTCCATGATAAGTCATCGCATCTTGACATGACTTCGTAG MWDLPEGVVFRLQDLELIICKNVPRTISMGNVYEAHDYLLNLRLFFYTAKDYNMSCLRNGILINMVVGGEVVTLESIEGSSGLYQMACLDSYKSPDQKGHYPPMSPRLSFSNDFVESHHPTNTNTNTHISQHQNSPPNISASDDFEFSALTNPSNHTMTAADELFFKGKLLPTLRDELLLHDDDDDAIVVPSFVPPKGLPKWKEFLSLKRSVVDGRCTGTGTDNDNNQGKMPKLALHDKSSHLDMTS Homology
BLAST of Cp4.1LG10g02570 vs. NCBI nr
Match: XP_023544728.1 (uncharacterized protein LOC111804229 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 338 bits (866), Expect = 1.08e-115 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Cp4.1LG10g02570 vs. NCBI nr
Match: XP_022950341.1 (uncharacterized protein LOC111453452 [Cucurbita moschata]) HSP 1 Score: 328 bits (842), Expect = 4.90e-112 Identity = 158/162 (97.53%), Postives = 159/162 (98.15%), Query Frame = 0
BLAST of Cp4.1LG10g02570 vs. NCBI nr
Match: KAG6604184.1 (hypothetical protein SDJN03_04793, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 323 bits (829), Expect = 4.52e-110 Identity = 158/162 (97.53%), Postives = 158/162 (97.53%), Query Frame = 0
BLAST of Cp4.1LG10g02570 vs. NCBI nr
Match: KAG7034345.1 (hypothetical protein SDJN02_04072, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 310 bits (794), Expect = 8.40e-105 Identity = 153/162 (94.44%), Postives = 155/162 (95.68%), Query Frame = 0
BLAST of Cp4.1LG10g02570 vs. NCBI nr
Match: XP_022977871.1 (uncharacterized protein LOC111478032 [Cucurbita maxima]) HSP 1 Score: 308 bits (790), Expect = 4.20e-104 Identity = 155/164 (94.51%), Postives = 156/164 (95.12%), Query Frame = 0
BLAST of Cp4.1LG10g02570 vs. ExPASy TrEMBL
Match: A0A6J1GEJ6 (uncharacterized protein LOC111453452 OS=Cucurbita moschata OX=3662 GN=LOC111453452 PE=4 SV=1) HSP 1 Score: 328 bits (842), Expect = 2.37e-112 Identity = 158/162 (97.53%), Postives = 159/162 (98.15%), Query Frame = 0
BLAST of Cp4.1LG10g02570 vs. ExPASy TrEMBL
Match: A0A6J1IL61 (uncharacterized protein LOC111478032 OS=Cucurbita maxima OX=3661 GN=LOC111478032 PE=4 SV=1) HSP 1 Score: 308 bits (790), Expect = 2.04e-104 Identity = 155/164 (94.51%), Postives = 156/164 (95.12%), Query Frame = 0
BLAST of Cp4.1LG10g02570 vs. ExPASy TrEMBL
Match: A0A0A0KIB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490830 PE=4 SV=1) HSP 1 Score: 195 bits (496), Expect = 9.59e-60 Identity = 114/168 (67.86%), Postives = 130/168 (77.38%), Query Frame = 0
BLAST of Cp4.1LG10g02570 vs. ExPASy TrEMBL
Match: A0A5D3CPD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004880 PE=4 SV=1) HSP 1 Score: 190 bits (482), Expect = 1.22e-57 Identity = 115/172 (66.86%), Postives = 132/172 (76.74%), Query Frame = 0
BLAST of Cp4.1LG10g02570 vs. ExPASy TrEMBL
Match: A0A1S3B2N0 (uncharacterized protein LOC103485334 OS=Cucumis melo OX=3656 GN=LOC103485334 PE=4 SV=1) HSP 1 Score: 187 bits (475), Expect = 1.36e-56 Identity = 114/172 (66.28%), Postives = 131/172 (76.16%), Query Frame = 0
BLAST of Cp4.1LG10g02570 vs. TAIR 10
Match: AT5G66800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 83.6 bits (205), Expect = 2.5e-16 Identity = 65/155 (41.94%), Postives = 84/155 (54.19%), Query Frame = 0
BLAST of Cp4.1LG10g02570 vs. TAIR 10
Match: AT4G34419.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G19200.1). ) HSP 1 Score: 42.0 bits (97), Expect = 8.3e-04 Identity = 32/91 (35.16%), Postives = 45/91 (49.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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