Cp4.1LG10g01810 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG10g01810
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionEpidermal patterning factor-like protein
LocationCp4.1LG10: 2999852 .. 3001472 (+)
RNA-Seq ExpressionCp4.1LG10g01810
SyntenyCp4.1LG10g01810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATGTAAGGAAAGGAGCAATAATTATAGTTTTGGAGGGAGGGCATGTGATGTGTGGAAGCAATTGACAAATGACAAGCAAACTCATAGTTGGGAAAATCAGAAGAAAGGATATGGATATGGATATGGCGTGATTAGGTGGGCGAGTTGAGAACAAAATCACAACAATCCCAAAACTTGAATTTTAAACTAACAACCAAAAACAGAAGAGGAGAAAGAAAGCGAAGGCAAAAGGAAAAGGAAGACCAAATCCCACTCTCACACACCTCCCATTGCGCTGCTCTCACGTCTGGTTATGGAACAACTTCGCAGCATTCAGGAGCATTTGCAAATTCCTACTTGCAACTCTCATTCTCACGAATTTTTCTTCTCTCTCAGTTCTTAACTCTTATTTTATTCTATTTTCTGTTGGGTTAAAGTGTTTGGAGGGGGGGCTCTTCTTTCGAGTTCTGAGGGGTTCTGCACTTTTTGGTACTCTCCCTTCTTTCTTGTGTTTCTTTTTCATTTGTCTTCCACGTTCAATCATCTCAAATATCTTTCCCACACTAACACACATATTCAGACCAAATTATATTATATACACGTACCACCGCCGTTGAGACCAAAATCAGAACCTATTCTCTCACCGATTCTGATTTAAAATTCACTTCTCCACCCACTTTCTTCTTTCCTTTCTTTCTGAATATCTAAGCTCTCCATCTCCAGGGACAATTCCCTGTCTCTTTCTCTGTGAGAACAATAGGAAAATGGGGTGTGAGTGTAACAACAATGGCGTCGTCATTGGGCGCAGCAGAATCTTGTGTGCGACTGTTTCTTTTCTCTGTCTTCTGATATTGGCATCGACCCAGATGAGAATCAAGGCTGAAGGTAACTGGGTATCTTTTGGATCTTCAAAACAGAGTCCAAAACCGGACTTTTATTCTTCATCTTACATTTTCGGTTCAATTTGAATCATCTTGTGAATCGTTTTTCTTTGCAGGTAGATCGATTTCAATGAGGACCAAGGTCAGTCCACAAACCACCGCTCTTCCCTCCCTTTCTCATATACTTCTTTGTTTCTGTGAAAGCTTGGTTAATTGAGAAGAATAATAATTTTGTGTTTCTTTTTTTGTTTTGATGCATTGGGATAGACAGTGAATGAAGATAAGGAGATATTAAGAGGACAAATTGGATCAAAGCCACCAAAATGTGAGAGAAGATGCAGCTGGTGCGGTCACTGTGAGGCCATTCAAGTTCCTGCAAACCCACAAAAATCAGCAACTAAAAAATCTTCAGCCGTGAAGAACATAGTTTATGCTAGAGATGAAGCCTCCAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAACTATTTTATATAACTCCCCCTTCAATTTCTCTCTCTCTCTCTCTATCTCTCTGTAAATTAATGATTATATGATTGTTAATTTCTTTAACTCAACCACTCTCTCCCCCTCTGTTTCGTTTTGGGACTCTTTAATTTCTACTACAATTCGATAAGCAGGCATTAGATGAAGAGCTCTCAACTTGGAACACTTTAGAACTCTCTCCAATACATTTCCTAGGTGGATACTCTTTCTTCCTTTTTGTTCTTTCTTTT

mRNA sequence

TAATGTAAGGAAAGGAGCAATAATTATAGTTTTGGAGGGAGGGCATGTGATGTGTGGAAGCAATTGACAAATGACAAGCAAACTCATAGTTGGGAAAATCAGAAGAAAGGATATGGATATGGATATGGCGTGATTAGGTGGGCGAGTTGAGAACAAAATCACAACAATCCCAAAACTTGAATTTTAAACTAACAACCAAAAACAGAAGAGGAGAAAGAAAGCGAAGGCAAAAGGAAAAGGAAGACCAAATCCCACTCTCACACACCTCCCATTGCGCTGCTCTCACGTCTGGTTATGGAACAACTTCGCAGCATTCAGGAGCATTTGCAAATTCCTACTTGCAACTCTCATTCTCACGAATTTTTCTTCTCTCTCAGTTCTTAACTCTTATTTTATTCTATTTTCTGTTGGGTTAAAGTGTTTGGAGGGGGGGCTCTTCTTTCGAGTTCTGAGGGGTTCTGCACTTTTTGGTACTCTCCCTTCTTTCTTGTGTTTCTTTTTCATTTGTCTTCCACGTTCAATCATCTCAAATATCTTTCCCACACTAACACACATATTCAGACCAAATTATATTATATACACGTACCACCGCCGTTGAGACCAAAATCAGAACCTATTCTCTCACCGATTCTGATTTAAAATTCACTTCTCCACCCACTTTCTTCTTTCCTTTCTTTCTGAATATCTAAGCTCTCCATCTCCAGGGACAATTCCCTGTCTCTTTCTCTGTGAGAACAATAGGAAAATGGGGTGTGAGTGTAACAACAATGGCGTCGTCATTGGGCGCAGCAGAATCTTGTGTGCGACTGTTTCTTTTCTCTGTCTTCTGATATTGGCATCGACCCAGATGAGAATCAAGGCTGAAGGTAGATCGATTTCAATGAGGACCAAGACAGTGAATGAAGATAAGGAGATATTAAGAGGACAAATTGGATCAAAGCCACCAAAATGTGAGAGAAGATGCAGCTGGTGCGGTCACTGTGAGGCCATTCAAGTTCCTGCAAACCCACAAAAATCAGCAACTAAAAAATCTTCAGCCGTGAAGAACATAGTTTATGCTAGAGATGAAGCCTCCAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAACTATTTTATATAACTCCCCCTTCAATTTCTCTCTCTCTCTCTCTATCTCTCTGTAAATTAATGATTATATGATTGTTAATTTCTTTAACTCAACCACTCTCTCCCCCTCTGTTTCGTTTTGGGACTCTTTAATTTCTACTACAATTCGATAAGCAGGCATTAGATGAAGAGCTCTCAACTTGGAACACTTTAGAACTCTCTCCAATACATTTCCTAGGTGGATACTCTTTCTTCCTTTTTGTTCTTTCTTTT

Coding sequence (CDS)

ATGGGGTGTGAGTGTAACAACAATGGCGTCGTCATTGGGCGCAGCAGAATCTTGTGTGCGACTGTTTCTTTTCTCTGTCTTCTGATATTGGCATCGACCCAGATGAGAATCAAGGCTGAAGGTAGATCGATTTCAATGAGGACCAAGACAGTGAATGAAGATAAGGAGATATTAAGAGGACAAATTGGATCAAAGCCACCAAAATGTGAGAGAAGATGCAGCTGGTGCGGTCACTGTGAGGCCATTCAAGTTCCTGCAAACCCACAAAAATCAGCAACTAAAAAATCTTCAGCCGTGAAGAACATAGTTTATGCTAGAGATGAAGCCTCCAATTACAAGCCCATGAGCTGGAAATGCAAATGTGGGAGCTTAATCTTCAACCCTTAA

Protein sequence

MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCKCGSLIFNP
Homology
[Close]
BLAST of Cp4.1LG10g01810 vs. ExPASy Swiss-Prot
Match: Q9T068 (EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EPFL2 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.6e-22
Identity = 60/118 (50.85%), Postives = 79/118 (66.95%), Query Frame = 0 

Query: 25  LCLLILASTQMRIKAEGR----SISMRTKTVNED-KEILRGQIGSKPPKCER-RCSWCGH 84
           L LLIL ST   + A GR    S+   TK+ ++D K ++RG IGS+PP+CER RC  CGH
Sbjct: 12  LILLILNSTHFSLMANGRPEPDSVEF-TKSGDQDVKMMMRGLIGSRPPRCERVRCRSCGH 71

Query: 85  CEAIQVPANPQ-------KSATKKSSAVKNIVYAR-DEASNYKPMSWKCKCGSLIFNP 129
           CEAIQVP NPQ        +++  SS   ++ Y R D+++NYKPMSWKCKCG+ I+NP
Sbjct: 72  CEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]
BLAST of Cp4.1LG10g01810 vs. ExPASy Swiss-Prot
Match: Q9LFT5 (EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EPFL1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-09
Identity = 29/78 (37.18%), Postives = 40/78 (51.28%), Query Frame = 0 

Query: 59  RGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAV--------KNIVYARDEAS 118
           + ++GS PP C  RC+ C  C AIQVP  P +S   + +           ++    D+ S
Sbjct: 45  KARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYS 104

Query: 119 NYKPMSWKCKCGSLIFNP 129
           NYKPM WKC C    +NP
Sbjct: 105 NYKPMGWKCHCNGHFYNP 122

[Close]
BLAST of Cp4.1LG10g01810 vs. ExPASy Swiss-Prot
Match: C4B8C4 (EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EPFL3 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-07
Identity = 28/73 (38.36%), Postives = 39/73 (53.42%), Query Frame = 0 

Query: 52  NEDKEIL---RGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDE 111
           NE+KE +   R +IGSKPP CE++C  C  CEAIQ P             + +I +    
Sbjct: 44  NENKEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFP------------TISSIPHLSPH 103

Query: 112 ASNYKPMSWKCKC 122
            +NY+P  W+C C
Sbjct: 104 YANYQPEGWRCHC 104

[Close]
BLAST of Cp4.1LG10g01810 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.3e-07
Identity = 37/121 (30.58%), Postives = 51/121 (42.15%), Query Frame = 0 

Query: 14  RSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKT------VNEDKEILRGQIGSKPP 73
           R R L A +    LL L S    + A+GR I  RT +      +  +K    G  GS PP
Sbjct: 7   RRRFLLAALVTFALLHLFSASSIVSADGRWIGQRTGSDLPGGFIRSNKRF--GGPGSSPP 66

Query: 74  KCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCKCGSLIFN 129
            C  +C  C  C+ + VP  P  S   +                Y P +W+CKCG+ +F 
Sbjct: 67  TCRSKCGKCQPCKPVHVPIQPGLSMPLE----------------YYPEAWRCKCGNKLFM 109

[Close]
BLAST of Cp4.1LG10g01810 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.2e-04
Identity = 22/69 (31.88%), Postives = 32/69 (46.38%), Query Frame = 0 

Query: 60  GQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKC 119
           G  GS PP C  +C  C  C+A+ VP  P             ++   +    Y P +W+C
Sbjct: 55  GGPGSVPPMCRLKCGKCEPCKAVHVPIQP------------GLIMPLE----YYPEAWRC 107

Query: 120 KCGSLIFNP 129
           KCG+ +F P
Sbjct: 115 KCGNKLFMP 107

[Close]
BLAST of Cp4.1LG10g01810 vs. NCBI nr
Match: XP_022949700.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata] >XP_022949701.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata] >XP_023544470.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo] >KAG7034260.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 266 bits (680), Expect = 6.55e-90
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRG 60
           MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRG
Sbjct: 1   MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRG 60

Query: 61  QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 120
           QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK
Sbjct: 61  QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 120

Query: 121 CGSLIFNP 128
           CGSLIFNP
Sbjct: 121 CGSLIFNP 128

[Close]
BLAST of Cp4.1LG10g01810 vs. NCBI nr
Match: KAG6604096.1 (EPIDERMAL PATTERNING FACTOR-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 265 bits (678), Expect = 3.19e-88
Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRG 60
           MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKE+LRG
Sbjct: 95  MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKELLRG 154

Query: 61  QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 120
           QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK
Sbjct: 155 QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 214

Query: 121 CGSLIFNP 128
           CGSLIFNP
Sbjct: 215 CGSLIFNP 222

[Close]
BLAST of Cp4.1LG10g01810 vs. NCBI nr
Match: XP_022979085.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima] >XP_022979086.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima])

HSP 1 Score: 260 bits (665), Expect = 1.27e-87
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 0 

Query: 1   MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRG 60
           MGCE NNNGVVIGRSRILCATVSFLCLLILASTQM+IKAEGRSISMRTKTVNEDKEILRG
Sbjct: 1   MGCERNNNGVVIGRSRILCATVSFLCLLILASTQMKIKAEGRSISMRTKTVNEDKEILRG 60

Query: 61  QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 120
           QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK
Sbjct: 61  QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 120

Query: 121 CGSLIFNP 128
           CGSLIFNP
Sbjct: 121 CGSLIFNP 128

[Close]
BLAST of Cp4.1LG10g01810 vs. NCBI nr
Match: XP_023003267.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita maxima])

HSP 1 Score: 216 bits (549), Expect = 5.14e-70
Identity = 106/128 (82.81%), Postives = 112/128 (87.50%), Query Frame = 0 

Query: 1   MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRG 60
           MGCECNNNGV+ GR RILCATVSFL LLILASTQMR  AEGRSIS   KTV+EDK +LRG
Sbjct: 1   MGCECNNNGVI-GRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRG 60

Query: 61  QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 120
           QIGS+PPKCERRCSWC HCEAIQVPANPQKS+T     +KNI YARDEASNYKPMSWKCK
Sbjct: 61  QIGSRPPKCERRCSWCAHCEAIQVPANPQKSST-----MKNIAYARDEASNYKPMSWKCK 120

Query: 121 CGSLIFNP 128
           CGSLIFNP
Sbjct: 121 CGSLIFNP 122

[Close]
BLAST of Cp4.1LG10g01810 vs. NCBI nr
Match: XP_022963149.1 (EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata])

HSP 1 Score: 217 bits (552), Expect = 1.06e-69
Identity = 107/128 (83.59%), Postives = 112/128 (87.50%), Query Frame = 0 

Query: 1   MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRG 60
           MGCECNNNGV+ GRSRILCATVSFL  LILASTQMR  AEGRSIS   KTV+EDK +LRG
Sbjct: 55  MGCECNNNGVI-GRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGKTVSEDKVVLRG 114

Query: 61  QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 120
           QIGS+PPKCERRCSWC HCEAIQVPANPQKS     SA+KNI YARDEASNYKPMSWKCK
Sbjct: 115 QIGSRPPKCERRCSWCAHCEAIQVPANPQKS-----SAMKNIAYARDEASNYKPMSWKCK 174

Query: 121 CGSLIFNP 128
           CGSLIFNP
Sbjct: 175 CGSLIFNP 176

[Close]
BLAST of Cp4.1LG10g01810 vs. ExPASy TrEMBL
Match: A0A6J1GDI3 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111453017 PE=3 SV=1)

HSP 1 Score: 266 bits (680), Expect = 3.17e-90
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 

Query: 1   MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRG 60
           MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRG
Sbjct: 1   MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRG 60

Query: 61  QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 120
           QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK
Sbjct: 61  QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 120

Query: 121 CGSLIFNP 128
           CGSLIFNP
Sbjct: 121 CGSLIFNP 128

[Close]
BLAST of Cp4.1LG10g01810 vs. ExPASy TrEMBL
Match: A0A6J1IS77 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111478828 PE=3 SV=1)

HSP 1 Score: 260 bits (665), Expect = 6.16e-88
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 0 

Query: 1   MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRG 60
           MGCE NNNGVVIGRSRILCATVSFLCLLILASTQM+IKAEGRSISMRTKTVNEDKEILRG
Sbjct: 1   MGCERNNNGVVIGRSRILCATVSFLCLLILASTQMKIKAEGRSISMRTKTVNEDKEILRG 60

Query: 61  QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 120
           QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK
Sbjct: 61  QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 120

Query: 121 CGSLIFNP 128
           CGSLIFNP
Sbjct: 121 CGSLIFNP 128

[Close]
BLAST of Cp4.1LG10g01810 vs. ExPASy TrEMBL
Match: A0A6J1KLZ1 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496927 PE=3 SV=1)

HSP 1 Score: 216 bits (549), Expect = 2.49e-70
Identity = 106/128 (82.81%), Postives = 112/128 (87.50%), Query Frame = 0 

Query: 1   MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRG 60
           MGCECNNNGV+ GR RILCATVSFL LLILASTQMR  AEGRSIS   KTV+EDK +LRG
Sbjct: 1   MGCECNNNGVI-GRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRG 60

Query: 61  QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 120
           QIGS+PPKCERRCSWC HCEAIQVPANPQKS+T     +KNI YARDEASNYKPMSWKCK
Sbjct: 61  QIGSRPPKCERRCSWCAHCEAIQVPANPQKSST-----MKNIAYARDEASNYKPMSWKCK 120

Query: 121 CGSLIFNP 128
           CGSLIFNP
Sbjct: 121 CGSLIFNP 122

[Close]
BLAST of Cp4.1LG10g01810 vs. ExPASy TrEMBL
Match: A0A6J1HJ94 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463445 PE=3 SV=1)

HSP 1 Score: 217 bits (552), Expect = 5.14e-70
Identity = 107/128 (83.59%), Postives = 112/128 (87.50%), Query Frame = 0 

Query: 1   MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRG 60
           MGCECNNNGV+ GRSRILCATVSFL  LILASTQMR  AEGRSIS   KTV+EDK +LRG
Sbjct: 55  MGCECNNNGVI-GRSRILCATVSFLFFLILASTQMRFMAEGRSISKSGKTVSEDKVVLRG 114

Query: 61  QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 120
           QIGS+PPKCERRCSWC HCEAIQVPANPQKS     SA+KNI YARDEASNYKPMSWKCK
Sbjct: 115 QIGSRPPKCERRCSWCAHCEAIQVPANPQKS-----SAMKNIAYARDEASNYKPMSWKCK 174

Query: 121 CGSLIFNP 128
           CGSLIFNP
Sbjct: 175 CGSLIFNP 176

[Close]
BLAST of Cp4.1LG10g01810 vs. ExPASy TrEMBL
Match: A0A6J1KNP8 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111496927 PE=3 SV=1)

HSP 1 Score: 216 bits (549), Expect = 6.45e-70
Identity = 106/128 (82.81%), Postives = 112/128 (87.50%), Query Frame = 0 

Query: 1   MGCECNNNGVVIGRSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKTVNEDKEILRG 60
           MGCECNNNGV+ GR RILCATVSFL LLILASTQMR  AEGRSIS   KTV+EDK +LRG
Sbjct: 30  MGCECNNNGVI-GRCRILCATVSFLFLLILASTQMRFMAEGRSISKSGKTVSEDKVVLRG 89

Query: 61  QIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCK 120
           QIGS+PPKCERRCSWC HCEAIQVPANPQKS+T     +KNI YARDEASNYKPMSWKCK
Sbjct: 90  QIGSRPPKCERRCSWCAHCEAIQVPANPQKSST-----MKNIAYARDEASNYKPMSWKCK 149

Query: 121 CGSLIFNP 128
           CGSLIFNP
Sbjct: 150 CGSLIFNP 151

[Close]
BLAST of Cp4.1LG10g01810 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 104.8 bits (260), Expect = 5.4e-23
Identity = 60/118 (50.85%), Postives = 79/118 (66.95%), Query Frame = 0 

Query: 25  LCLLILASTQMRIKAEGR----SISMRTKTVNED-KEILRGQIGSKPPKCER-RCSWCGH 84
           L LLIL ST   + A GR    S+   TK+ ++D K ++RG IGS+PP+CER RC  CGH
Sbjct: 12  LILLILNSTHFSLMANGRPEPDSVEF-TKSGDQDVKMMMRGLIGSRPPRCERVRCRSCGH 71

Query: 85  CEAIQVPANPQ-------KSATKKSSAVKNIVYAR-DEASNYKPMSWKCKCGSLIFNP 129
           CEAIQVP NPQ        +++  SS   ++ Y R D+++NYKPMSWKCKCG+ I+NP
Sbjct: 72  CEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

[Close]
BLAST of Cp4.1LG10g01810 vs. TAIR 10
Match: AT5G10310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13898.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10
Identity = 29/78 (37.18%), Postives = 40/78 (51.28%), Query Frame = 0 

Query: 59  RGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAV--------KNIVYARDEAS 118
           + ++GS PP C  RC+ C  C AIQVP  P +S   + +           ++    D+ S
Sbjct: 45  KARLGSTPPSCHNRCNNCHPCMAIQVPTLPTRSRFTRVNPFSGGFVRPPSSLTTVLDQYS 104

Query: 119 NYKPMSWKCKCGSLIFNP 129
           NYKPM WKC C    +NP
Sbjct: 105 NYKPMGWKCHCNGHFYNP 122

[Close]
BLAST of Cp4.1LG10g01810 vs. TAIR 10
Match: AT3G13898.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1). )

HSP 1 Score: 56.6 bits (135), Expect = 1.7e-08
Identity = 28/73 (38.36%), Postives = 39/73 (53.42%), Query Frame = 0 

Query: 52  NEDKEIL---RGQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDE 111
           NE+KE +   R +IGSKPP CE++C  C  CEAIQ P             + +I +    
Sbjct: 44  NENKEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFP------------TISSIPHLSPH 103

Query: 112 ASNYKPMSWKCKC 122
            +NY+P  W+C C
Sbjct: 104 YANYQPEGWRCHC 104

[Close]
BLAST of Cp4.1LG10g01810 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 3.8e-08
Identity = 37/121 (30.58%), Postives = 51/121 (42.15%), Query Frame = 0 

Query: 14  RSRILCATVSFLCLLILASTQMRIKAEGRSISMRTKT------VNEDKEILRGQIGSKPP 73
           R R L A +    LL L S    + A+GR I  RT +      +  +K    G  GS PP
Sbjct: 7   RRRFLLAALVTFALLHLFSASSIVSADGRWIGQRTGSDLPGGFIRSNKRF--GGPGSSPP 66

Query: 74  KCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKCKCGSLIFN 129
            C  +C  C  C+ + VP  P  S   +                Y P +W+CKCG+ +F 
Sbjct: 67  TCRSKCGKCQPCKPVHVPIQPGLSMPLE----------------YYPEAWRCKCGNKLFM 109

[Close]
BLAST of Cp4.1LG10g01810 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 46.2 bits (108), Expect = 2.3e-05
Identity = 22/69 (31.88%), Postives = 32/69 (46.38%), Query Frame = 0 

Query: 60  GQIGSKPPKCERRCSWCGHCEAIQVPANPQKSATKKSSAVKNIVYARDEASNYKPMSWKC 119
           G  GS PP C  +C  C  C+A+ VP  P             ++   +    Y P +W+C
Sbjct: 55  GGPGSVPPMCRLKCGKCEPCKAVHVPIQP------------GLIMPLE----YYPEAWRC 107

Query: 120 KCGSLIFNP 129
           KCG+ +F P
Sbjct: 115 KCGNKLFMP 107

The following BLAST results are available for this feature:
BLAST of Cp4.1LG10g01810 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9T0687.6e-2250.85EPIDERMAL PATTERNING FACTOR-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9LFT51.5e-0937.18EPIDERMAL PATTERNING FACTOR-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
C4B8C42.4e-0738.36EPIDERMAL PATTERNING FACTOR-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q2V3I35.3e-0730.58EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
Q9LUH93.2e-0431.88EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
BLAST of Cp4.1LG10g01810 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022949700.16.55e-90100.00EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata] >XP_022949701.1 ... [more]
KAG6604096.13.19e-8899.22EPIDERMAL PATTERNING FACTOR-like protein 2, partial [Cucurbita argyrosperma subs... [more]
XP_022979085.11.27e-8798.44EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima] >XP_022979086.1 EP... [more]
XP_023003267.15.14e-7082.81EPIDERMAL PATTERNING FACTOR-like protein 2 isoform X2 [Cucurbita maxima][more]
XP_022963149.11.06e-6983.59EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata][more]
BLAST of Cp4.1LG10g01810 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GDI33.17e-90100.00Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1IS776.16e-8898.44Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11147... [more]
A0A6J1KLZ12.49e-7082.81Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
A0A6J1HJ945.14e-7083.59Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1KNP86.45e-7082.81Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149... [more]
BLAST of Cp4.1LG10g01810 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G37810.15.4e-2350.85unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G10310.11.1e-1037.18unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G13898.11.7e-0838.36unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot... [more]
AT4G14723.13.8e-0830.58BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);... [more]
AT3G22820.12.3e-0531.88allergen-related [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF17181EPFcoord: 61..128
e-value: 2.4E-17
score: 62.6
NoneNo IPR availablePANTHERPTHR33109:SF71EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 2coord: 10..128
IPR039455EPIDERMAL PATTERNING FACTOR-like proteinPANTHERPTHR33109EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4coord: 10..128

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g01810.1Cp4.1LG10g01810.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010052 guard cell differentiation
biological_process GO:0010374 stomatal complex development
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane