Cp4.1LG10g01140 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGTCTCTTTGGAAGCTCTGGCAATGGCCGGGATGGACTCCGGCGACTGGGGCATAGATGTTGAGGAATGGGAAACCCAAGACTTGGACCGCTGCCCTCCCCCGTATCTCCTCGCCGAAGAACGAGATGACGATGAAACTTCAGAACAACCAGGTCGTTCTGAGCCACCGTCGCAGAGTCGCCGGCGATCATGA ATGTCTGTCTCTTTGGAAGCTCTGGCAATGGCCGGGATGGACTCCGGCGACTGGGGCATAGATGTTGAGGAATGGGAAACCCAAGACTTGGACCGCTGCCCTCCCCCGTATCTCCTCGCCGAAGAACGAGATGACGATGAAACTTCAGAACAACCAGGTCGTTCTGAGCCACCGTCGCAGAGTCGCCGGCGATCATGA ATGTCTGTCTCTTTGGAAGCTCTGGCAATGGCCGGGATGGACTCCGGCGACTGGGGCATAGATGTTGAGGAATGGGAAACCCAAGACTTGGACCGCTGCCCTCCCCCGTATCTCCTCGCCGAAGAACGAGATGACGATGAAACTTCAGAACAACCAGGTCGTTCTGAGCCACCGTCGCAGAGTCGCCGGCGATCATGA MSVSLEALAMAGMDSGDWGIDVEEWETQDLDRCPPPYLLAEERDDDETSEQPGRSEPPSQSRRRS Homology
BLAST of Cp4.1LG10g01140 vs. NCBI nr
Match: KAG7034201.1 (Protein SENSITIVE TO PROTON RHIZOTOXICITY 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 125 bits (315), Expect = 1.79e-32 Identity = 62/65 (95.38%), Postives = 63/65 (96.92%), Query Frame = 0
BLAST of Cp4.1LG10g01140 vs. NCBI nr
Match: KAG6604036.1 (Zinc finger protein STOP1-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 123 bits (308), Expect = 1.73e-31 Identity = 61/65 (93.85%), Postives = 62/65 (95.38%), Query Frame = 0
BLAST of Cp4.1LG10g01140 vs. NCBI nr
Match: KGN48742.1 (hypothetical protein Csa_004391 [Cucumis sativus]) HSP 1 Score: 84.0 bits (206), Expect = 1.69e-19 Identity = 46/64 (71.88%), Postives = 53/64 (82.81%), Query Frame = 0
BLAST of Cp4.1LG10g01140 vs. NCBI nr
Match: KAA0036308.1 (prostatic spermine-binding protein [Cucumis melo var. makuwa] >TYK12702.1 prostatic spermine-binding protein [Cucumis melo var. makuwa]) HSP 1 Score: 79.7 bits (195), Expect = 8.48e-18 Identity = 45/67 (67.16%), Postives = 52/67 (77.61%), Query Frame = 0
BLAST of Cp4.1LG10g01140 vs. NCBI nr
Match: XP_022132368.1 (uncharacterized protein LOC111005244 [Momordica charantia]) HSP 1 Score: 76.6 bits (187), Expect = 3.01e-16 Identity = 34/46 (73.91%), Postives = 41/46 (89.13%), Query Frame = 0
BLAST of Cp4.1LG10g01140 vs. ExPASy TrEMBL
Match: A0A0A0KK23 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499860 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 8.19e-20 Identity = 46/64 (71.88%), Postives = 53/64 (82.81%), Query Frame = 0
BLAST of Cp4.1LG10g01140 vs. ExPASy TrEMBL
Match: A0A5D3CMY4 (Prostatic spermine-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002900 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 4.10e-18 Identity = 45/67 (67.16%), Postives = 52/67 (77.61%), Query Frame = 0
BLAST of Cp4.1LG10g01140 vs. ExPASy TrEMBL
Match: A0A6J1BW23 (uncharacterized protein LOC111005244 OS=Momordica charantia OX=3673 GN=LOC111005244 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 1.46e-16 Identity = 34/46 (73.91%), Postives = 41/46 (89.13%), Query Frame = 0
BLAST of Cp4.1LG10g01140 vs. ExPASy TrEMBL
Match: A0A1Q3CWR7 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28116 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.20e-13 Identity = 30/44 (68.18%), Postives = 37/44 (84.09%), Query Frame = 0
BLAST of Cp4.1LG10g01140 vs. ExPASy TrEMBL
Match: A0A5D2LIB1 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D03G043100v1 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 1.92e-13 Identity = 28/46 (60.87%), Postives = 39/46 (84.78%), Query Frame = 0
BLAST of Cp4.1LG10g01140 vs. TAIR 10
Match: AT2G22320.1 (unknown protein; Has 7 Blast hits to 7 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 7.5e-05 Identity = 21/46 (45.65%), Postives = 32/46 (69.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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