Homology
BLAST of Cp4.1LG10g01040 vs. ExPASy Swiss-Prot
Match:
Q9SV96 (Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2453 PE=2 SV=1)
HSP 1 Score: 614.4 bits (1583), Expect = 1.2e-174
Identity = 321/503 (63.82%), Postives = 390/503 (77.53%), Query Frame = 0
Query: 10 SPSFTPFSS--SSRNFQLSQTWLPLPLSL---RRAVSTRVVCISTRPNRKSGAKTDRSEA 69
SPS FS SS + WL ++L RR+ TR+ C + RK A+ + +E
Sbjct: 7 SPSSLRFSDFISSIPKETDHKWLRFSVNLGDARRSTRTRITCGAISSRRKL-AERESAER 66
Query: 70 EE--LVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWMQK 129
E LVR ++ + SD+EPL+KTLDKYV+V+R +HCFLLFEELGK DKWLQCLEVFRWMQK
Sbjct: 67 ENRVLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQK 126
Query: 130 QRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKDKA 189
QRWYI DNGVYSKLIS+MGKKGQ RMA+WLFSEM+NSGCRPD SVYNALITAHLH++DKA
Sbjct: 127 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKA 186
Query: 190 KALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADIYT 249
KAL KV Y +KMKG+ERC+PNVVTYNIL RAFAQ+GKVDQVNALFKDLD S VS D+YT
Sbjct: 187 KALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 246
Query: 250 YNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLL 309
+NGVMDAYGKNGMIKEME +L RM+SNE KPDII+FN+LIDSYGKKQ F+KMEQ FKSL+
Sbjct: 247 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 306
Query: 310 RSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVS 369
RSKE+PTLPTFNSMI NYGKAR+ ++AE VF+KM DM Y PS++T E +IMMYG+C VS
Sbjct: 307 RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVS 366
Query: 370 KAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKLLY 429
+AREIF+ + S + ++ STLNAML+VYC NGL +EAD LF +AS+ +V PD++TYK LY
Sbjct: 367 RAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLY 426
Query: 430 KAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSESS 489
KAYTKAD KE V+ L+K M+K GI+PNKRFFL+AL GS +G+ +R S S
Sbjct: 427 KAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFGS-----RLPGSGSENRKSTRS 486
Query: 490 VEKPISSRNRRGSRKLESSVKNH 506
S + R G++ E K++
Sbjct: 487 SRSRDSPKGRGGNQLTEFQDKDN 503
BLAST of Cp4.1LG10g01040 vs. ExPASy Swiss-Prot
Match:
A7LN87 (Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4577 GN=PPR5 PE=2 SV=1)
HSP 1 Score: 596.3 bits (1536), Expect = 3.3e-169
Identity = 300/470 (63.83%), Postives = 366/470 (77.87%), Query Frame = 0
Query: 41 STRVVCISTRPNRK-------SGAKTDRSEAEELVRGVIRKFS-DKEPLLKTLDKYVRVM 100
+TR V ++ R R+ G +EA ELVR ++R+ + KE L+ LD++VRV+
Sbjct: 27 ATRHVALAARSKRRGAGPAAAEGVDEAAAEAAELVRSLLRRTAGGKERLVPVLDRHVRVV 86
Query: 101 RTEHCFLLFEELGKKDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWL 160
RTEHCFLLFEELG++D WLQCL+VFRWMQKQRWY+ADNG+YSKLIS+MG+KGQIRMA+WL
Sbjct: 87 RTEHCFLLFEELGRRDAWLQCLDVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWL 146
Query: 161 FSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLWYFEKMKGMERCKPNVVTYNILT 220
FS+MRNSGC+PDTSVYN+LI AHLHS+DK KAL K L YFEKMK +ERC+P +VTYNIL
Sbjct: 147 FSQMRNSGCKPDTSVYNSLIGAHLHSRDKTKALAKALGYFEKMKCIERCQPTIVTYNILL 206
Query: 221 RAFAQAGKVDQVNALFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMETMLARMKSNEIK 280
RAFAQAG QV+ LFKDLDES+VS D+YTYNGV+DAYGKNGMIKEME++L RMKS + +
Sbjct: 207 RAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRMKSTQCR 266
Query: 281 PDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLRERAEEV 340
PD+I+FN+LIDSYG+KQ FDKMEQVFKSLLRSKERPT PTFNSMITNYG+ARLRE+AE V
Sbjct: 267 PDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREKAESV 326
Query: 341 FRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKAVRVSTLNAMLDVYCM 400
KM+++G+ P+YVT E LI+MY HCDCVSKAR++FD +V S V +S+LN+ML+ YCM
Sbjct: 327 VEKMEELGFKPNYVTQECLIIMYAHCDCVSKARQVFDELVTSQTKVHLSSLNSMLEAYCM 386
Query: 401 NGLPMEADLLFESASSMKVFPDSTTYKLLYKAYTKADAKELVEKLLKNMDKAGIIPNKRF 460
NGL EAD L ++A V P+ +TYKLLYKAYTKA+ K LV+KLLK M+K GI+PNK+F
Sbjct: 387 NGLHTEADRLLDTALQQCVVPNGSTYKLLYKAYTKANDKLLVQKLLKRMNKQGIVPNKKF 446
Query: 461 FLDALGTVGSSPEKPEPARTGTGSRHSESSVEKPISSRNRRGSRKLESSV 503
FLDAL G+S KP RT G + S K E SV
Sbjct: 447 FLDALEAFGTSDRKP---RTSPGINSASKPSTDSAGDSETATSDKPEVSV 493
BLAST of Cp4.1LG10g01040 vs. ExPASy Swiss-Prot
Match:
A3ABE1 (Pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0750400 PE=3 SV=2)
HSP 1 Score: 595.9 bits (1535), Expect = 4.3e-169
Identity = 294/438 (67.12%), Postives = 359/438 (81.96%), Query Frame = 0
Query: 60 DRSEAEELVRGVIRKFS-DKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFR 119
+ +EA +LVR +R+ S KE L+ LD++V+V+RTEHCFLLFEELG++D WLQCLEVFR
Sbjct: 50 EAAEAADLVRFFLRRTSGGKERLVAVLDRHVKVVRTEHCFLLFEELGRRDGWLQCLEVFR 109
Query: 120 WMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHS 179
WMQKQRWY+ADNG+YSKLIS+MG+KGQIRMA+WLFS+MRNSGCRPDTSVYN+LI HLHS
Sbjct: 110 WMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNSLIGTHLHS 169
Query: 180 KDKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSA 239
+DK+KAL K L YFEKMK ++RC+PN+VTYNIL RAFAQAG Q++ LFKDLDES VS
Sbjct: 170 RDKSKALAKALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKDLDESPVSP 229
Query: 240 DIYTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVF 299
DIYTYNGVMDAYGKNGMI EME++L RMKSN+ +PD+I+FN+LIDSYG+KQ FDKMEQVF
Sbjct: 230 DIYTYNGVMDAYGKNGMITEMESVLVRMKSNQCRPDVITFNILIDSYGRKQAFDKMEQVF 289
Query: 300 KSLLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHC 359
KSLLRSKE+PT PTFNSMITNYGKARLRE+AE V KM +MG+ P+YVT E LIMMY +C
Sbjct: 290 KSLLRSKEKPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMMYAYC 349
Query: 360 DCVSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTY 419
DCVS+AR+IFD +V+S V +S++NAMLD YCMNGLPMEAD L +S P ++TY
Sbjct: 350 DCVSRARQIFDELVSSQNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSASTY 409
Query: 420 KLLYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRH 479
KLLYKAYTKA+ K+L++KLLK M+ GI+PNK+FFLDAL G++ +KP
Sbjct: 410 KLLYKAYTKANDKKLIQKLLKRMNSQGIVPNKKFFLDALEAFGNTDKKPRTV-------P 469
Query: 480 SESSVEKP-ISSRNRRGS 496
S++S KP + S N G+
Sbjct: 470 SKNSASKPDVESANNSGT 480
BLAST of Cp4.1LG10g01040 vs. ExPASy Swiss-Prot
Match:
Q9SCP4 (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX=3702 GN=At3g53170 PE=3 SV=1)
HSP 1 Score: 166.4 bits (420), Expect = 8.5e-40
Identity = 109/380 (28.68%), Postives = 174/380 (45.79%), Query Frame = 0
Query: 102 EELGKKDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGC 161
+E K+++W L++F ++KQ WY Y+KL ++G Q A LF M + G
Sbjct: 66 DEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGL 125
Query: 162 RPDTSVYNALITAHLHSKDKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKV 221
+P VY +LI+ + K++ L K E MK + CKP+V T+ +L + G+
Sbjct: 126 KPTIDVYTSLISVY----GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRF 185
Query: 222 DQVNALFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMETMLA----------------- 281
D V ++ ++ V TYN ++D YGK GM +EME++LA
Sbjct: 186 DLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNS 245
Query: 282 -------------------RMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSK 341
R + ++PDI +FN+LI S+GK ++ KM V + +
Sbjct: 246 IIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRF 305
Query: 342 ERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAR 401
T T+N +I +GKA E+ ++VFRKMK G P+ +T SL+ Y V K
Sbjct: 306 FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKID 365
Query: 402 EIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKLLYKAY 446
+ +VNS + N +++ Y G L+ K PD T+ + K Y
Sbjct: 366 SVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 425
BLAST of Cp4.1LG10g01040 vs. ExPASy Swiss-Prot
Match:
Q9SQU6 (Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2750 PE=1 SV=1)
HSP 1 Score: 162.5 bits (410), Expect = 1.2e-38
Identity = 100/354 (28.25%), Postives = 174/354 (49.15%), Query Frame = 0
Query: 103 ELGKKDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCR 162
+L K +WLQ LEVF +++Q +Y G Y KL+ ++GK GQ A LF EM G
Sbjct: 97 DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156
Query: 163 PDTSVYNALITAHLHSK--DKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGK 222
P +Y AL+ A+ S D A +++ +KMK +C+P+V TY+ L +A A +
Sbjct: 157 PTVELYTALLAAYTRSNLIDDAFSIL------DKMKSFPQCQPDVFTYSTLLKACVDASQ 216
Query: 223 VDQVNALFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMETMLARM-KSNEIKPDIISFN 282
D V++L+K++DE +++ + T N V+ YG+ G +ME +L+ M S KPD+ + N
Sbjct: 217 FDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMN 276
Query: 283 LLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDM 342
+++ +G D ME ++ P TFN +I +YGK R+ ++ V M+ +
Sbjct: 277 IILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKL 336
Query: 343 GYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEA 402
+ + T ++I + FD M + G T +++ Y GL +
Sbjct: 337 EFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKV 396
Query: 403 DLLFESASSMKVFPDSTTYKLLYKAYTKADAKELVEKLLKNMDKAGIIPNKRFF 454
+ A+ ++ ++ Y + A KAD +E++ M + + + R F
Sbjct: 397 ISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTF 444
BLAST of Cp4.1LG10g01040 vs. NCBI nr
Match:
XP_023543919.1 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1009 bits (2609), Expect = 0.0
Identity = 512/512 (100.00%), Postives = 512/512 (100.00%), Query Frame = 0
Query: 1 MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSGAKTD 60
MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSGAKTD
Sbjct: 1 MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSGAKTD 60
Query: 61 RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM
Sbjct: 61 RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
Query: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
Query: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
Query: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
Query: 481 SSVEKPISSRNRRGSRKLESSVKNHAPELGLA 512
SSVEKPISSRNRRGSRKLESSVKNHAPELGLA
Sbjct: 481 SSVEKPISSRNRRGSRKLESSVKNHAPELGLA 512
BLAST of Cp4.1LG10g01040 vs. NCBI nr
Match:
KAG7034169.1 (Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1006 bits (2600), Expect = 0.0
Identity = 510/512 (99.61%), Postives = 511/512 (99.80%), Query Frame = 0
Query: 1 MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSGAKTD 60
MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKS AKTD
Sbjct: 1 MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60
Query: 61 RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM
Sbjct: 61 RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
Query: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
Query: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
LLRSKERPTLPTFNSMITNYGKARLRE+AEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
Query: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
Query: 481 SSVEKPISSRNRRGSRKLESSVKNHAPELGLA 512
SSVEKPISSRNRRGSRKLESSVKNHAPELGLA
Sbjct: 481 SSVEKPISSRNRRGSRKLESSVKNHAPELGLA 512
BLAST of Cp4.1LG10g01040 vs. NCBI nr
Match:
XP_022950765.1 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita moschata])
HSP 1 Score: 1005 bits (2599), Expect = 0.0
Identity = 510/512 (99.61%), Postives = 510/512 (99.61%), Query Frame = 0
Query: 1 MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSGAKTD 60
MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKS AKTD
Sbjct: 1 MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60
Query: 61 RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
RSE EELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM
Sbjct: 61 RSETEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
Query: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
Query: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
Query: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
Query: 481 SSVEKPISSRNRRGSRKLESSVKNHAPELGLA 512
SSVEKPISSRNRRGSRKLESSVKNHAPELGLA
Sbjct: 481 SSVEKPISSRNRRGSRKLESSVKNHAPELGLA 512
BLAST of Cp4.1LG10g01040 vs. NCBI nr
Match:
KAG6604006.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1004 bits (2595), Expect = 0.0
Identity = 509/512 (99.41%), Postives = 511/512 (99.80%), Query Frame = 0
Query: 1 MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSGAKTD 60
MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKS AKTD
Sbjct: 1 MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60
Query: 61 RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM
Sbjct: 61 RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
Query: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
Query: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
LLRSKERPTLPTFNSMITNYGKARLRE+AEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
Query: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
VSKAREIF+GMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL
Sbjct: 361 VSKAREIFNGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
Query: 481 SSVEKPISSRNRRGSRKLESSVKNHAPELGLA 512
SSVEKPISSRNRRGSRKLESSVKNHAPELGLA
Sbjct: 481 SSVEKPISSRNRRGSRKLESSVKNHAPELGLA 512
BLAST of Cp4.1LG10g01040 vs. NCBI nr
Match:
XP_022978471.1 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita maxima])
HSP 1 Score: 994 bits (2569), Expect = 0.0
Identity = 504/512 (98.44%), Postives = 506/512 (98.83%), Query Frame = 0
Query: 1 MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSGAKTD 60
MPLSFSLQFSPSFTPFSSSSRNFQ SQTWLPLPLSLRRAVSTRVVCISTRP RKSGAKTD
Sbjct: 1 MPLSFSLQFSPSFTPFSSSSRNFQRSQTWLPLPLSLRRAVSTRVVCISTRPKRKSGAKTD 60
Query: 61 RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM
Sbjct: 61 RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
Query: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
Query: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMK MGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKGMGYDPSYVTCESLIMMYGHCDC 360
Query: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSM+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMRVFPDSTTYKL 420
Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPA TGTGSRHSE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPASTGTGSRHSE 480
Query: 481 SSVEKPISSRNRRGSRKLESSVKNHAPELGLA 512
SSVE PISSRNRRGSRKLESSVKNH PELGLA
Sbjct: 481 SSVENPISSRNRRGSRKLESSVKNHTPELGLA 512
BLAST of Cp4.1LG10g01040 vs. ExPASy TrEMBL
Match:
A0A6J1GGN3 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111453772 PE=3 SV=1)
HSP 1 Score: 1005 bits (2599), Expect = 0.0
Identity = 510/512 (99.61%), Postives = 510/512 (99.61%), Query Frame = 0
Query: 1 MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSGAKTD 60
MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKS AKTD
Sbjct: 1 MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSAAKTD 60
Query: 61 RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
RSE EELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM
Sbjct: 61 RSETEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
Query: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
Query: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
Query: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
Query: 481 SSVEKPISSRNRRGSRKLESSVKNHAPELGLA 512
SSVEKPISSRNRRGSRKLESSVKNHAPELGLA
Sbjct: 481 SSVEKPISSRNRRGSRKLESSVKNHAPELGLA 512
BLAST of Cp4.1LG10g01040 vs. ExPASy TrEMBL
Match:
A0A6J1IMR8 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111478441 PE=3 SV=1)
HSP 1 Score: 994 bits (2569), Expect = 0.0
Identity = 504/512 (98.44%), Postives = 506/512 (98.83%), Query Frame = 0
Query: 1 MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSGAKTD 60
MPLSFSLQFSPSFTPFSSSSRNFQ SQTWLPLPLSLRRAVSTRVVCISTRP RKSGAKTD
Sbjct: 1 MPLSFSLQFSPSFTPFSSSSRNFQRSQTWLPLPLSLRRAVSTRVVCISTRPKRKSGAKTD 60
Query: 61 RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM
Sbjct: 61 RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
Query: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
Query: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMK MGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKGMGYDPSYVTCESLIMMYGHCDC 360
Query: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSM+VFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMRVFPDSTTYKL 420
Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPA TGTGSRHSE
Sbjct: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPASTGTGSRHSE 480
Query: 481 SSVEKPISSRNRRGSRKLESSVKNHAPELGLA 512
SSVE PISSRNRRGSRKLESSVKNH PELGLA
Sbjct: 481 SSVENPISSRNRRGSRKLESSVKNHTPELGLA 512
BLAST of Cp4.1LG10g01040 vs. ExPASy TrEMBL
Match:
A0A5A7T266 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G00650 PE=3 SV=1)
HSP 1 Score: 910 bits (2351), Expect = 0.0
Identity = 462/531 (87.01%), Postives = 484/531 (91.15%), Query Frame = 0
Query: 1 MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSGAKTD 60
MPLS S QFSP FT SSSR QLS+ W P+P SL++ STRVVC+STRP+RKSG KTD
Sbjct: 1 MPLSLSPQFSPIFTTSYSSSRTSQLSRLWFPVPSSLKKTFSTRVVCVSTRPSRKSGVKTD 60
Query: 61 RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
RSEAEELVRG+I+KFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61 RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
KAKALVKVLWYFEKMKGMERCKPN+VTYNILTRAFAQA KVDQVN LFKDLDES+VSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
Query: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
YTYNGVMDAYGKNG IKEME MLARMKSN+IKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
Query: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
LLRSKERPTLPTFNSMITNYGKARLR++AEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
Query: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
VSKAREIFDGMVNSGK VRVSTLNAMLDVYC+NGLP EAD+LFESA +MKVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420
Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART TGSR+SE
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480
Query: 481 SSVEK-------------------PISSRNRRGSRKLESSVKNHAPELGLA 512
SSVEK PISSR R GSR LES V+NHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 531
BLAST of Cp4.1LG10g01040 vs. ExPASy TrEMBL
Match:
A0A5D3CMK0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002480 PE=3 SV=1)
HSP 1 Score: 907 bits (2345), Expect = 0.0
Identity = 462/531 (87.01%), Postives = 484/531 (91.15%), Query Frame = 0
Query: 1 MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSGAKTD 60
MPLS S QFSP FT SSSR QLS+ WLP+P SL++ STRVVC+STR +RKSG KTD
Sbjct: 1 MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRLSRKSGVKTD 60
Query: 61 RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
RSEAEELVRG+I+KFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61 RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
KAKALVKVLWYFEKMKGMERCKPN+VTYNILTRAFAQA KVDQVN LFKDLDES+VSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
Query: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
YTYNGVMDAYGKNG IKEME MLARMKSN+IKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
Query: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
LLRSKERPTLPTFNSMITNYGKARLR++AEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
Query: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
VSKAREIFDGMVNSGK VRVSTLNAMLDVYC+NGLP EAD+LFESA +MKVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420
Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART TGSR+SE
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480
Query: 481 SSVEK-------------------PISSRNRRGSRKLESSVKNHAPELGLA 512
SSVEK PISSR R GSR LES V+NHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 531
BLAST of Cp4.1LG10g01040 vs. ExPASy TrEMBL
Match:
A0A1S3B2D9 (pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485009 PE=3 SV=1)
HSP 1 Score: 907 bits (2345), Expect = 0.0
Identity = 462/531 (87.01%), Postives = 484/531 (91.15%), Query Frame = 0
Query: 1 MPLSFSLQFSPSFTPFSSSSRNFQLSQTWLPLPLSLRRAVSTRVVCISTRPNRKSGAKTD 60
MPLS S QFSP FT SSSR QLS+ WLP+P SL++ STRVVC+STR +RKSG KTD
Sbjct: 1 MPLSLSPQFSPIFTTSYSSSRTSQLSRLWLPVPSSLKKTFSTRVVCVSTRLSRKSGVKTD 60
Query: 61 RSEAEELVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWM 120
RSEAEELVRG+I+KFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGK+DKWLQCLEVFRWM
Sbjct: 61 RSEAEELVRGIIKKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKRDKWLQCLEVFRWM 120
Query: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
QKQRWYIADNGVYSKLISIMGKKGQIRMA+WLFSEMRNSGCRPDTSVYNALITAHLHSKD
Sbjct: 121 QKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD 180
Query: 181 KAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADI 240
KAKALVKVLWYFEKMKGMERCKPN+VTYNILTRAFAQA KVDQVN LFKDLDES+VSADI
Sbjct: 181 KAKALVKVLWYFEKMKGMERCKPNIVTYNILTRAFAQAAKVDQVNTLFKDLDESVVSADI 240
Query: 241 YTYNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
YTYNGVMDAYGKNG IKEME MLARMKSN+IKPDIISFNLLIDSYGKKQLFDKMEQVFKS
Sbjct: 241 YTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLLIDSYGKKQLFDKMEQVFKS 300
Query: 301 LLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
LLRSKERPTLPTFNSMITNYGKARLR++AEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC
Sbjct: 301 LLRSKERPTLPTFNSMITNYGKARLRDKAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDC 360
Query: 361 VSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKL 420
VSKAREIFDGMVNSGK VRVSTLNAMLDVYC+NGLP EAD+LFESA +MKVFPDSTTYKL
Sbjct: 361 VSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPFEADMLFESAGNMKVFPDSTTYKL 420
Query: 421 LYKAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSE 480
LYKAYTKAD KEL+EKLLKNMDKAGIIPNKRFFLDALGT+GSS EKPEPART TGSR+SE
Sbjct: 421 LYKAYTKADMKELLEKLLKNMDKAGIIPNKRFFLDALGTIGSSREKPEPARTKTGSRNSE 480
Query: 481 SSVEK-------------------PISSRNRRGSRKLESSVKNHAPELGLA 512
SSVEK PISSR R GSR LES V+NHAPELGLA
Sbjct: 481 SSVEKQSSSRTRSGPRNLESNVQKPISSRTRTGSRNLESGVENHAPELGLA 531
BLAST of Cp4.1LG10g01040 vs. TAIR 10
Match:
AT4G39620.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 614.4 bits (1583), Expect = 8.4e-176
Identity = 321/503 (63.82%), Postives = 390/503 (77.53%), Query Frame = 0
Query: 10 SPSFTPFSS--SSRNFQLSQTWLPLPLSL---RRAVSTRVVCISTRPNRKSGAKTDRSEA 69
SPS FS SS + WL ++L RR+ TR+ C + RK A+ + +E
Sbjct: 7 SPSSLRFSDFISSIPKETDHKWLRFSVNLGDARRSTRTRITCGAISSRRKL-AERESAER 66
Query: 70 EE--LVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWMQK 129
E LVR ++ + SD+EPL+KTLDKYV+V+R +HCFLLFEELGK DKWLQCLEVFRWMQK
Sbjct: 67 ENRVLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQK 126
Query: 130 QRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKDKA 189
QRWYI DNGVYSKLIS+MGKKGQ RMA+WLFSEM+NSGCRPD SVYNALITAHLH++DKA
Sbjct: 127 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKA 186
Query: 190 KALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADIYT 249
KAL KV Y +KMKG+ERC+PNVVTYNIL RAFAQ+GKVDQVNALFKDLD S VS D+YT
Sbjct: 187 KALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 246
Query: 250 YNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLL 309
+NGVMDAYGKNGMIKEME +L RM+SNE KPDII+FN+LIDSYGKKQ F+KMEQ FKSL+
Sbjct: 247 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 306
Query: 310 RSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVS 369
RSKE+PTLPTFNSMI NYGKAR+ ++AE VF+KM DM Y PS++T E +IMMYG+C VS
Sbjct: 307 RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVS 366
Query: 370 KAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKLLY 429
+AREIF+ + S + ++ STLNAML+VYC NGL +EAD LF +AS+ +V PD++TYK LY
Sbjct: 367 RAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLY 426
Query: 430 KAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSESS 489
KAYTKAD KE V+ L+K M+K GI+PNKRFFL+AL GS +G+ +R S S
Sbjct: 427 KAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFGS-----RLPGSGSENRKSTRS 486
Query: 490 VEKPISSRNRRGSRKLESSVKNH 506
S + R G++ E K++
Sbjct: 487 SRSRDSPKGRGGNQLTEFQDKDN 503
BLAST of Cp4.1LG10g01040 vs. TAIR 10
Match:
AT4G39620.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 614.0 bits (1582), Expect = 1.1e-175
Identity = 321/502 (63.94%), Postives = 389/502 (77.49%), Query Frame = 0
Query: 10 SPSFTPFSS--SSRNFQLSQTWLPLPLSL---RRAVSTRVVCISTRPNRKSGAKTDRSEA 69
SPS FS SS + WL ++L RR+ TR+ C + RK A+ + +E
Sbjct: 7 SPSSLRFSDFISSIPKETDHKWLRFSVNLGDARRSTRTRITCGAISSRRKL-AERESAER 66
Query: 70 EE--LVRGVIRKFSDKEPLLKTLDKYVRVMRTEHCFLLFEELGKKDKWLQCLEVFRWMQK 129
E LVR ++ + SD+EPL+KTLDKYV+V+R +HCFLLFEELGK DKWLQCLEVFRWMQK
Sbjct: 67 ENRVLVRSLMSRISDREPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVFRWMQK 126
Query: 130 QRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVYNALITAHLHSKDKA 189
QRWYI DNGVYSKLIS+MGKKGQ RMA+WLFSEM+NSGCRPD SVYNALITAHLH++DKA
Sbjct: 127 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKA 186
Query: 190 KALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNALFKDLDESIVSADIYT 249
KAL KV Y +KMKG+ERC+PNVVTYNIL RAFAQ+GKVDQVNALFKDLD S VS D+YT
Sbjct: 187 KALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 246
Query: 250 YNGVMDAYGKNGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLL 309
+NGVMDAYGKNGMIKEME +L RM+SNE KPDII+FN+LIDSYGKKQ F+KMEQ FKSL+
Sbjct: 247 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 306
Query: 310 RSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVS 369
RSKE+PTLPTFNSMI NYGKAR+ ++AE VF+KM DM Y PS++T E +IMMYG+C VS
Sbjct: 307 RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVS 366
Query: 370 KAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKLLY 429
+AREIF+ + S + ++ STLNAML+VYC NGL +EAD LF +AS+ +V PD++TYK LY
Sbjct: 367 RAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLY 426
Query: 430 KAYTKADAKELVEKLLKNMDKAGIIPNKRFFLDALGTVGSSPEKPEPARTGTGSRHSESS 489
KAYTKAD KE V+ L+K M+K GI+PNKRFFL+AL GS +G+ +R S S
Sbjct: 427 KAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVFGS-----RLPGSGSENRKSTRS 486
Query: 490 VEKPISSRNRRGSRKLESSVKN 505
S + R G++ E K+
Sbjct: 487 SRSRDSPKGRGGNQLTEFQDKD 502
BLAST of Cp4.1LG10g01040 vs. TAIR 10
Match:
AT3G53170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 165.2 bits (417), Expect = 1.3e-40
Identity = 109/381 (28.61%), Postives = 174/381 (45.67%), Query Frame = 0
Query: 102 EELGKKDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGC 161
+E K+++W L++F ++KQ WY Y+KL ++G Q A LF M + G
Sbjct: 116 DEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGL 175
Query: 162 RPDTSVYNALITAHLHSKDKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKV 221
+P VY +LI+ + K++ L K E MK + CKP+V T+ +L + G+
Sbjct: 176 KPTIDVYTSLISVY----GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRF 235
Query: 222 DQVNALFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMETMLA----------------- 281
D V ++ ++ V TYN ++D YGK GM +EME++LA
Sbjct: 236 DLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNS 295
Query: 282 -------------------RMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSK 341
R + ++PDI +FN+LI S+GK ++ KM V + +
Sbjct: 296 IIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRF 355
Query: 342 ERPTLPTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAR 401
T T+N +I +GKA E+ ++VFRKMK G P+ +T SL+ Y V K
Sbjct: 356 FSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKID 415
Query: 402 EIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKLLYKAY 447
+ +VNS + N +++ Y G L+ K PD T+ + K Y
Sbjct: 416 SVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 475
BLAST of Cp4.1LG10g01040 vs. TAIR 10
Match:
AT3G06430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 162.5 bits (410), Expect = 8.7e-40
Identity = 100/354 (28.25%), Postives = 174/354 (49.15%), Query Frame = 0
Query: 103 ELGKKDKWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCR 162
+L K +WLQ LEVF +++Q +Y G Y KL+ ++GK GQ A LF EM G
Sbjct: 97 DLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLE 156
Query: 163 PDTSVYNALITAHLHSK--DKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGK 222
P +Y AL+ A+ S D A +++ +KMK +C+P+V TY+ L +A A +
Sbjct: 157 PTVELYTALLAAYTRSNLIDDAFSIL------DKMKSFPQCQPDVFTYSTLLKACVDASQ 216
Query: 223 VDQVNALFKDLDESIVSADIYTYNGVMDAYGKNGMIKEMETMLARM-KSNEIKPDIISFN 282
D V++L+K++DE +++ + T N V+ YG+ G +ME +L+ M S KPD+ + N
Sbjct: 217 FDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMN 276
Query: 283 LLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLRERAEEVFRKMKDM 342
+++ +G D ME ++ P TFN +I +YGK R+ ++ V M+ +
Sbjct: 277 IILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKL 336
Query: 343 GYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKAVRVSTLNAMLDVYCMNGLPMEA 402
+ + T ++I + FD M + G T +++ Y GL +
Sbjct: 337 EFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKV 396
Query: 403 DLLFESASSMKVFPDSTTYKLLYKAYTKADAKELVEKLLKNMDKAGIIPNKRFF 454
+ A+ ++ ++ Y + A KAD +E++ M + + + R F
Sbjct: 397 ISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTF 444
BLAST of Cp4.1LG10g01040 vs. TAIR 10
Match:
AT5G48730.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 158.3 bits (399), Expect = 1.6e-38
Identity = 113/386 (29.27%), Postives = 182/386 (47.15%), Query Frame = 0
Query: 109 KWLQCLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAIWLFSEMRNSGCRPDTSVY 168
+W ++VF +++Q WY + G+Y KLI ++GK Q A LF EM N GC + VY
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188
Query: 169 NALITAHLHSK--DKAKALVKVLWYFEKMKGMERCKPNVVTYNILTRAFAQAGKVDQVNA 228
AL++A+ S D A L+ E+MK C+P+V TY+IL ++F Q D+V
Sbjct: 189 TALVSAYSRSGRFDAAFTLL------ERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQD 248
Query: 229 LFKDLDESIVSADIYTYNGVMDAYGK---------------------------------- 288
L D+ + + TYN ++DAYGK
Sbjct: 249 LLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAF 308
Query: 289 --NGMIKEMETMLARMKSNEIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTL 348
NG I+ ME + +S+ I+P+I +FN+L+DSYGK + KM V + + + T+
Sbjct: 309 GGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTI 368
Query: 349 PTFNSMITNYGKARLRERAEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDG 408
T+N +I +G+A ++ E +FR M+ PS VT SL+ YG K +
Sbjct: 369 VTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRF 428
Query: 409 MVNSGKAVRVSTLNAMLDVYCMNGLPMEADLLFESASSMKVFPDSTTYKLLYKAYTKADA 454
+ NS + + N ++D Y E + E PD TY+ + KAY +
Sbjct: 429 IENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGM 488
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SV96 | 1.2e-174 | 63.82 | Pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Arabidop... | [more] |
A7LN87 | 3.3e-169 | 63.83 | Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays OX=4... | [more] |
A3ABE1 | 4.3e-169 | 67.12 | Pentatricopeptide repeat-containing protein PPR5 homolog, chloroplastic OS=Oryza... | [more] |
Q9SCP4 | 8.5e-40 | 28.68 | Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX... | [more] |
Q9SQU6 | 1.2e-38 | 28.25 | Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
XP_023543919.1 | 0.0 | 100.00 | pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita ... | [more] |
KAG7034169.1 | 0.0 | 99.61 | Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosper... | [more] |
XP_022950765.1 | 0.0 | 99.61 | pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita ... | [more] |
KAG6604006.1 | 0.0 | 99.41 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022978471.1 | 0.0 | 98.44 | pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GGN3 | 0.0 | 99.61 | pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucurbit... | [more] |
A0A6J1IMR8 | 0.0 | 98.44 | pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucurbit... | [more] |
A0A5A7T266 | 0.0 | 87.01 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5D3CMK0 | 0.0 | 87.01 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3B2D9 | 0.0 | 87.01 | pentatricopeptide repeat-containing protein At4g39620, chloroplastic OS=Cucumis ... | [more] |
Match Name | E-value | Identity | Description | |
AT4G39620.1 | 8.4e-176 | 63.82 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G39620.2 | 1.1e-175 | 63.94 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G53170.1 | 1.3e-40 | 28.61 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G06430.1 | 8.7e-40 | 28.25 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G48730.1 | 1.6e-38 | 29.27 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |