Cp4.1LG10g00360 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g00360
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	thioredoxin H-type-like
Location	Cp4.1LG10: 3704531 .. 3706068 (-)
RNA-Seq Expression	Cp4.1LG10g00360
Synteny	Cp4.1LG10g00360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGCAAAATCGTGATTAATCAGAAAGAAAGGTCCAATTCTGTGTAAAAAAAGCATTTCTCTTTACCTATTTAAAGGAGAAATTCTCGCAGTGATCAAAATCTGTTTGGTGTGTCGGTTTTATCAGAGATTCGTAAAAGTAGAGAAGGAAACGAAGGAGATATGGCAGTAGCAGAGGGACGAGTCATCCACTGCAACACCATTGATTCATGGAACCACCAAATTCAGAAGGGCAATGCCTCTCAGGAACTGGTACAACCATTTCAATTCCTCTTCAACTTTGTGTTCTTCGCATTACCTTGATTTAATCGCCAGTATGTTCATTGATTTCAATGTATCGGTATTACTTGATTTGATCCGCTCATTGCATTCTGCGTTGCGTATTTCAAACTCATCTTGATATGCTCCAGAAAACTTTTCCGTTCTTTTTCTTTGCTTTTTTGTGGTATGGTAGAAAAAGTAGTAATCAAATTGTGACATGTTTCGAATCTTTCGTGCTTCCTTTTCTTTATTGAACAATCAATACCATTTTTGTCTCCCACTTATTGCTTTCCAAAGCAAAGCAAAGCAAACCAATTGGATACATCTGTAGTAGACATTTACTACATTGAGATCATATGCTTATACGAAGCCATTTCCAATCCAGTCCTTTTCTAAATTTCACCACCAATCATTTTCTCACCAGAATAGAAGCAATCTTCATGTAGTTGGAACTACCTATTATTGAGTTTGACATTTTAACTTACTGTACATATCAGATATAGTAGGATTTTGTTCACGAGTGTTAGAATTGATGCAGATAGTGGTGGATTTCACTGCATCATGGTGTGGTCCGTGTCGGTTCATTGCGCCTTTTCTAGACGAGCTTGCTCAGAAATTTCCCAGTGTCACATTTCTCAAGGTTGATGTTGATGATCTGGAGGTACTATAAATCACAATTTATAAATCCTCCTCTGGATTTTCTCTGTGTGTGTGTGTAGCTTTAGTTAAAATGCGTTGAATGGTGCAGTCGGTAGCTAAAGATTGGGGGGTGGAGGCAATGCCTACTTTTATGTTCCTGAAAGAGGGAAGAATTGTGGACAAGGTGGTTGGAGCTAAGAAGGAAGAACTGCAGCAGACTGTATTCAAGCACATGGCTGCTACTTCTTCTGCCTGATATTCACCAACGACAATTGGGCTCTGAAGTAGAGATATAAACAACTTCATTATACTATGAAACCGCTTAAATTTTCTATACTTGATTACCAGCTCCTATCCGCTCGCTTTGTTATTAGAAGAACACGGTATATTCTCCCTTTCGAAGTGGCTTTTATTGTTTGTCTTTTCTTCTTTCTCTTAAGTTGAAAAAACAATGTTATTGTTGCATTAGTATAATTGGGATGTGGGAATCTGATATTGAAAGAACAGGAAGACGATTCTTTAGGAGGAAGATTTGCTTAATGTATTTTATGGGTAATTCTGATTAGTTAAATTCGATTTGACATTAGAGTCGTGCATTTTGGAATGAAATTATACCCTTCTCCATATCTGGAGGAATCT

mRNA sequence

GTGGCAAAATCGTGATTAATCAGAAAGAAAGGTCCAATTCTGTGTAAAAAAAGCATTTCTCTTTACCTATTTAAAGGAGAAATTCTCGCAGTGATCAAAATCTGTTTGGTGTGTCGGTTTTATCAGAGATTCGTAAAAGTAGAGAAGGAAACGAAGGAGATATGGCAGTAGCAGAGGGACGAGTCATCCACTGCAACACCATTGATTCATGGAACCACCAAATTCAGAAGGGCAATGCCTCTCAGGAACTGATAGTGGTGGATTTCACTGCATCATGGTGTGGTCCGTGTCGGTTCATTGCGCCTTTTCTAGACGAGCTTGCTCAGAAATTTCCCAGTGTCACATTTCTCAAGGTTGATGTTGATGATCTGGAGTCGGTAGCTAAAGATTGGGGGGTGGAGGCAATGCCTACTTTTATGTTCCTGAAAGAGGGAAGAATTGTGGACAAGGTGGTTGGAGCTAAGAAGGAAGAACTGCAGCAGACTGTATTCAAGCACATGGCTGCTACTTCTTCTGCCTGATATTCACCAACGACAATTGGGCTCTGAAGTAGAGATATAAACAACTTCATTATACTATGAAACCGCTTAAATTTTCTATACTTGATTACCAGCTCCTATCCGCTCGCTTTGTTATTAGAAGAACACGGTATATTCTCCCTTTCGAAGTGGCTTTTATTGTTTGTCTTTTCTTCTTTCTCTTAAGTTGAAAAAACAATGTTATTGTTGCATTAGTATAATTGGGATGTGGGAATCTGATATTGAAAGAACAGGAAGACGATTCTTTAGGAGGAAGATTTGCTTAATGTATTTTATGGGTAATTCTGATTAGTTAAATTCGATTTGACATTAGAGTCGTGCATTTTGGAATGAAATTATACCCTTCTCCATATCTGGAGGAATCT

Coding sequence (CDS)

ATGGCAGTAGCAGAGGGACGAGTCATCCACTGCAACACCATTGATTCATGGAACCACCAAATTCAGAAGGGCAATGCCTCTCAGGAACTGATAGTGGTGGATTTCACTGCATCATGGTGTGGTCCGTGTCGGTTCATTGCGCCTTTTCTAGACGAGCTTGCTCAGAAATTTCCCAGTGTCACATTTCTCAAGGTTGATGTTGATGATCTGGAGTCGGTAGCTAAAGATTGGGGGGTGGAGGCAATGCCTACTTTTATGTTCCTGAAAGAGGGAAGAATTGTGGACAAGGTGGTTGGAGCTAAGAAGGAAGAACTGCAGCAGACTGTATTCAAGCACATGGCTGCTACTTCTTCTGCCTGA

Protein sequence

MAVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA

Homology

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BLAST of Cp4.1LG10g00360 vs. ExPASy Swiss-Prot
Match: Q43636 (Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 2.8e-47
Identity = 85/118 (72.03%), Postives = 105/118 (88.98%), Query Frame = 0


Query: 1   MAVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV 60
           MA  EG+VI C+T+++WN Q+QKGN ++ LIVVDFTASWCGPCRFIAPFL ELA+K P+V
Sbjct: 1   MAAEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNV 60

Query: 61  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS 119
           TFLKVDVD+L++VA +W VE+MPTFMFLKEG+I+DKVVGAKK+ELQQT+ KHMA  S+
Sbjct: 61  TFLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHMATAST 118

[Close]

BLAST of Cp4.1LG10g00360 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.9e-44
Identity = 78/114 (68.42%), Postives = 98/114 (85.96%), Query Frame = 0


Query: 1   MAVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV 60
           MA  EG+VI C+T+++WN Q+QK N S+ L+VVDFTASWCGPCRFIAPF  +LA+K P+V
Sbjct: 1   MASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNV 60

Query: 61  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMA 115
            FLKVD D+L+SVA DW ++AMPTFMFLKEG+I+DKVVGAKK+ELQ T+ KH+A
Sbjct: 61  LFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]

BLAST of Cp4.1LG10g00360 vs. ExPASy Swiss-Prot
Match: Q07090 (Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 3.8e-44
Identity = 82/115 (71.30%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 5   EGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLK 64
           EG+VI  +T+D+WN  +QKG   ++LIVVDFTASWCGPC+FIA F  ELA+K P+VTFLK
Sbjct: 4   EGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTFLK 63

Query: 65  VDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA 120
           VDVD+L+SVA DW VEAMPTFMFLKEG+IVDKVVGAKK+ELQQT+ KH+++TS+A
Sbjct: 64  VDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKHISSTSTA 118

[Close]

BLAST of Cp4.1LG10g00360 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 4.1e-38
Identity = 68/110 (61.82%), Postives = 91/110 (82.73%), Query Frame = 0


Query: 5   EGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLK 64
           EG+V  C+ ++ WN   +KG  +++L+VVDFTASWCGPCRFIAP L ++A+K P V FLK
Sbjct: 11  EGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFLK 70

Query: 65  VDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMA 115
           VDVD+L++V+ +W VEAMPTF+F+K+G+ VD+VVGAKKEELQQT+ KH A
Sbjct: 71  VDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHAA 120

[Close]

BLAST of Cp4.1LG10g00360 vs. ExPASy Swiss-Prot
Match: Q39239 (Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2)

HSP 1 Score: 148.7 bits (374), Expect = 4.3e-35
Identity = 69/119 (57.98%), Postives = 89/119 (74.79%), Query Frame = 0


Query: 1   MAVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKF-PS 60
           MA  EG+VI C+T D W  Q+ K   S +LIV+DFTASWC PCR IAP  ++LA+KF  S
Sbjct: 1   MAAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSS 60

Query: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS 119
             F KVDVD+L+SVAK++GVEAMPTF+F+K G +VDK+VGA KE+LQ  + KH   T++
Sbjct: 61  AIFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHTGVTTA 119

[Close]

BLAST of Cp4.1LG10g00360 vs. NCBI nr
Match: XP_023543830.1 (thioredoxin H-type-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246 bits (629), Expect = 2.02e-82
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MAVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV 60
           MAVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV
Sbjct: 1   MAVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV 60

Query: 61  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA 119
           TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA
Sbjct: 61  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA 119

[Close]

BLAST of Cp4.1LG10g00360 vs. NCBI nr
Match: KAG6603933.1 (hypothetical protein SDJN03_04542, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034113.1 hypothetical protein SDJN02_03840, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 243 bits (621), Expect = 3.35e-81
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MAVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV 60
           MAVAEGRVI CNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV
Sbjct: 1   MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV 60

Query: 61  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA 119
           TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA
Sbjct: 61  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA 119

[Close]

BLAST of Cp4.1LG10g00360 vs. NCBI nr
Match: XP_022950147.1 (thioredoxin H-type-like [Cucurbita moschata])

HSP 1 Score: 242 bits (618), Expect = 9.62e-81
Identity = 117/119 (98.32%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MAVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV 60
           MAVAEGRVI CNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV
Sbjct: 1   MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV 60

Query: 61  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA 119
           TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA+KEELQQTVFKHMAATSSA
Sbjct: 61  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGARKEELQQTVFKHMAATSSA 119

[Close]

BLAST of Cp4.1LG10g00360 vs. NCBI nr
Match: XP_022977568.1 (thioredoxin H-type [Cucurbita maxima])

HSP 1 Score: 242 bits (617), Expect = 1.37e-80
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MAVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV 60
           MAVAEGRVI CNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV
Sbjct: 1   MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV 60

Query: 61  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS 118
           TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS
Sbjct: 61  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS 118

[Close]

BLAST of Cp4.1LG10g00360 vs. NCBI nr
Match: XP_023517738.1 (thioredoxin H-type [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229 bits (583), Expect = 2.17e-75
Identity = 108/118 (91.53%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 2   AVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 61
           A AEGRVI CNTIDSWNHQIQKGNAS+ELIVVDF+ASWCGPCRFI PFL++LAQKFP+VT
Sbjct: 3   AAAEGRVIRCNTIDSWNHQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTVT 62

Query: 62  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA 119
           FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHM+AT+SA
Sbjct: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120

[Close]

BLAST of Cp4.1LG10g00360 vs. ExPASy TrEMBL
Match: A0A6J1GE02 (thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111453323 PE=4 SV=1)

HSP 1 Score: 242 bits (618), Expect = 4.66e-81
Identity = 117/119 (98.32%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MAVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV 60
           MAVAEGRVI CNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV
Sbjct: 1   MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV 60

Query: 61  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA 119
           TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGA+KEELQQTVFKHMAATSSA
Sbjct: 61  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGARKEELQQTVFKHMAATSSA 119

[Close]

BLAST of Cp4.1LG10g00360 vs. ExPASy TrEMBL
Match: A0A6J1IQD5 (thioredoxin H-type OS=Cucurbita maxima OX=3661 GN=LOC111477862 PE=4 SV=1)

HSP 1 Score: 242 bits (617), Expect = 6.62e-81
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MAVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV 60
           MAVAEGRVI CNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV
Sbjct: 1   MAVAEGRVIRCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV 60

Query: 61  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS 118
           TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS
Sbjct: 61  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS 118

[Close]

BLAST of Cp4.1LG10g00360 vs. ExPASy TrEMBL
Match: A0A6J1HER7 (thioredoxin H-type OS=Cucurbita moschata OX=3662 GN=LOC111463317 PE=4 SV=1)

HSP 1 Score: 226 bits (575), Expect = 1.75e-74
Identity = 107/118 (90.68%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 2   AVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 61
           A AEGRVI CNTIDSWN QIQKGNAS+ELIVVDF+ASWCGPCRFI PFL++LAQKFP+VT
Sbjct: 3   AAAEGRVIRCNTIDSWNQQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTVT 62

Query: 62  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA 119
           FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHM+AT+SA
Sbjct: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120

[Close]

BLAST of Cp4.1LG10g00360 vs. ExPASy TrEMBL
Match: A0A6J1BTW6 (thioredoxin H-type OS=Momordica charantia OX=3673 GN=LOC111005317 PE=4 SV=1)

HSP 1 Score: 225 bits (574), Expect = 2.40e-74
Identity = 107/118 (90.68%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 1   MAVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV 60
           MA +EGRVI CNT+D+WN QIQKGN SQELIVVDFTASWCGPCRFI PFLDELA K PSV
Sbjct: 1   MAASEGRVIRCNTVDAWNQQIQKGNGSQELIVVDFTASWCGPCRFIGPFLDELAHKCPSV 60

Query: 61  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS 118
           TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAAT+S
Sbjct: 61  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATAS 118

[Close]

BLAST of Cp4.1LG10g00360 vs. ExPASy TrEMBL
Match: A0A6J1KSA6 (thioredoxin H-type-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496792 PE=4 SV=1)

HSP 1 Score: 223 bits (568), Expect = 2.04e-73
Identity = 106/118 (89.83%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 2   AVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVT 61
           A AEGRVI CNTI SWN QIQKGNAS+ELIVVDF+ASWCGPCRFI PFL++LAQKFP+VT
Sbjct: 3   AAAEGRVIRCNTIGSWNQQIQKGNASEELIVVDFSASWCGPCRFIEPFLNQLAQKFPTVT 62

Query: 62  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA 119
           FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHM+AT+SA
Sbjct: 63  FLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMSATASA 120

[Close]

BLAST of Cp4.1LG10g00360 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 179.1 bits (453), Expect = 2.1e-45
Identity = 78/114 (68.42%), Postives = 98/114 (85.96%), Query Frame = 0


Query: 1   MAVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSV 60
           MA  EG+VI C+T+++WN Q+QK N S+ L+VVDFTASWCGPCRFIAPF  +LA+K P+V
Sbjct: 1   MASEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNV 60

Query: 61  TFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMA 115
            FLKVD D+L+SVA DW ++AMPTFMFLKEG+I+DKVVGAKK+ELQ T+ KH+A
Sbjct: 61  LFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114

[Close]

BLAST of Cp4.1LG10g00360 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 148.7 bits (374), Expect = 3.0e-36
Identity = 69/119 (57.98%), Postives = 89/119 (74.79%), Query Frame = 0


Query: 1   MAVAEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKF-PS 60
           MA  EG+VI C+T D W  Q+ K   S +LIV+DFTASWC PCR IAP  ++LA+KF  S
Sbjct: 1   MAAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSS 60

Query: 61  VTFLKVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSS 119
             F KVDVD+L+SVAK++GVEAMPTF+F+K G +VDK+VGA KE+LQ  + KH   T++
Sbjct: 61  AIFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHTGVTTA 119

[Close]

BLAST of Cp4.1LG10g00360 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 148.3 bits (373), Expect = 4.0e-36
Identity = 63/115 (54.78%), Postives = 91/115 (79.13%), Query Frame = 0


Query: 5   EGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLK 64
           EG VI C+T++ WN +++  N S++LIV+DFTASWC PCRFIAP   E+A+KF +V F K
Sbjct: 4   EGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFK 63

Query: 65  VDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA 120
           +DVD+L++VA+++ VEAMPTF+F+KEG I+D+VVGA K+E+ + + KH    +SA
Sbjct: 64  IDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKHGGLVASA 118

[Close]

BLAST of Cp4.1LG10g00360 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 134.8 bits (338), Expect = 4.5e-32
Identity = 60/116 (51.72%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 4   AEGRVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFL 63
           AEG VI C+T++ W  +++  N S++LIV+DFTA+WC PCRFIAP   +LA+K   V F 
Sbjct: 3   AEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFF 62

Query: 64  KVDVDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFKHMAATSSA 120
           KVDVD+L +VA+++ V+AMPTF+F+KEG I + VVGA KEE+   + KH    ++A
Sbjct: 63  KVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAAA 118

[Close]

BLAST of Cp4.1LG10g00360 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 110.5 bits (275), Expect = 9.1e-25
Identity = 48/105 (45.71%), Postives = 73/105 (69.52%), Query Frame = 0


Query: 7   RVIHCNTIDSWNHQIQKGNASQELIVVDFTASWCGPCRFIAPFLDELAQKFPSVTFLKVD 66
           RV+  ++   W     +   S +L+VVDF+ASWCGPCR I P +  +A KF  V F+K+D
Sbjct: 26  RVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLD 85

Query: 67  VDDLESVAKDWGVEAMPTFMFLKEGRIVDKVVGAKKEELQQTVFK 112
           VD+L  VAK++ V AMPTF+ +K G+ +++++GAKK+EL++ V K
Sbjct: 86  VDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSK 130

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g00360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43636	2.8e-47	72.03	Thioredoxin H-type OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
P29448	2.9e-44	68.42	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
Q07090	3.8e-44	71.30	Thioredoxin H-type 2 OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]
P29449	4.1e-38	61.82	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q39239	4.3e-35	57.98	Thioredoxin H4 OS=Arabidopsis thaliana OX=3702 GN=TRX4 PE=1 SV=2	[more]

BLAST of Cp4.1LG10g00360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543830.1	2.02e-82	100.00	thioredoxin H-type-like [Cucurbita pepo subsp. pepo]	[more]
KAG6603933.1	3.35e-81	99.16	hypothetical protein SDJN03_04542, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022950147.1	9.62e-81	98.32	thioredoxin H-type-like [Cucurbita moschata]	[more]
XP_022977568.1	1.37e-80	99.15	thioredoxin H-type [Cucurbita maxima]	[more]
XP_023517738.1	2.17e-75	91.53	thioredoxin H-type [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG10g00360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GE02	4.66e-81	98.32	thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111453323 PE=4 SV=1	[more]
A0A6J1IQD5	6.62e-81	99.15	thioredoxin H-type OS=Cucurbita maxima OX=3661 GN=LOC111477862 PE=4 SV=1	[more]
A0A6J1HER7	1.75e-74	90.68	thioredoxin H-type OS=Cucurbita moschata OX=3662 GN=LOC111463317 PE=4 SV=1	[more]
A0A6J1BTW6	2.40e-74	90.68	thioredoxin H-type OS=Momordica charantia OX=3673 GN=LOC111005317 PE=4 SV=1	[more]
A0A6J1KSA6	2.04e-73	89.83	thioredoxin H-type-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496792 P...	[more]

BLAST of Cp4.1LG10g00360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51030.1	2.1e-45	68.42	thioredoxin H-type 1	[more]
AT1G19730.1	3.0e-36	57.98	Thioredoxin superfamily protein	[more]
AT1G45145.1	4.0e-36	54.78	thioredoxin H-type 5	[more]
AT5G42980.1	4.5e-32	51.72	thioredoxin 3	[more]
AT5G39950.1	9.1e-25	45.71	thioredoxin 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 39..48 score: 65.28 coord: 31..39 score: 53.21 coord: 78..89 score: 40.28
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..118 e-value: 9.9E-39 score: 134.1
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 4..118
None	No IPR available	PANTHER	PTHR10438:SF421	THIOREDOXIN H-TYPE-LIKE ISOFORM X1	coord: 4..118
None	No IPR available	CDD	cd02947	TRX_family	coord: 26..109 e-value: 1.33815E-35 score: 115.733
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 12..109 e-value: 5.1E-30 score: 103.5
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 1..114 score: 14.29544
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 32..50
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 6..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g00360.1	Cp4.1LG10g00360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
molecular_function	GO:0015035	protein-disulfide reductase activity