Cp4.1LG09g10960 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g10960
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Dihydrothymine dehydrogenase
Location	Cp4.1LG09: 9530435 .. 9539267 (+)
RNA-Seq Expression	Cp4.1LG09g10960
Synteny	Cp4.1LG09g10960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTTTTTTTTTTTTTTTTGGATTAATAAATATTACAAATTAATTCTTAGGAAATAGGGGGAGTGGTTAACTCATTATCCCTTAATTACCTAAAAATTAGAAAAATGGATAATTTGACCGAATGAATATTCATCTGGGGATTGTTAATTCGATCATCATTCATCATTATAAAATTCATTAATATTCTGAATCCAAAAGCAAGCCGACGATGACGATTCTTCCTGCCCCATCTTCTTAATCGAATATTACACCTCAGATTCACTCACCCATCTTCTTCTTCTTCTGAATCACCTCTGGATTTCTTCATCCATGGCGTCGTTGAATTTCACCCAAATCAGAAGCAGAAACCCAATTTCCGACCTCACTCTGACTCGGTCTCAGACGGGTTTGGCTCGTCGGACTCGAGTTGGGTTCAAAGTGGTTGCCGCCAGTGAGTCTCCGGTGGAGCCCGATCTCAGTGTGACGGTCAATGGGTTGCACATGCCCAACCCGTTCGTAATCGGTTCCGGTCCTCCGGGAACAAACTACACGGTTATGAAGAGGGCATTCGATGAAGGGTGGGGGGCTGTGATCGCCAAAACTGTAAGTTCTGTCCTCTTTGATTCTGTTTGGTTACTGAGAAAATCGATGGGAAAGTTGTAAGACATTACAGGGAATGTTTTGATCTTAGTTCATCCATTTTCAACTCTGTAATTTGGATTTTGAATGGCAAATCTGGTTCTGTTCTTGGGCGTTATCTGTGATCTTGAACATTATGAACATAAGGAATGGATCTCAGTGCAATTAAGAGAATGTTTAGATTAGGAATATGATAATTGTTTGAAGTGTTTGGCTAGAGGCTCCTGGTTCTGCTATCATCCATGGCTTACATATCCATCTCATGATATCATTTTTCATCTGTTAGGTATCATTAGATGCAGCTAAAGTTATAAACGTTACTCCACGATATGCTCGGCTTCGAGCGGATTCGAATGGTTCTGCAAAAGGGCAGATTATAGGGTGGGAGAACATTGAATTGATAAGTGATAGACCTCTTGAAACTATGTTGAAAGAGTTTAAGCAGTTGAAGGAGGAGTATCCTGATAGGATTCTTATTGCTTCGATCATGGAGGAGTATAATAAAGCTGCTTGGGAAGAACTTATCGATCGAGTCGAACAAACCGGAGTTGTAAGATTACTGTCTATGGATTTTCTCCCAAGAACATGTTCTTTTGATTCATTGTGTATGTTTCTTTCTTCAGGATGCATTTGAAATCAATTTCTCGTGTCCTCATGGCATGCCCGAACGGAGAATGGGCGCTGCGGTCGGGCAGGATTGCGCGCTTTTGGAAGAGGTTTGTGGATGGATAAATGCTAAAGCTACAATCCCTGTGTGGGCTAAAATGACTCCCAATATCACTGACATTGCACAGGTATTTTTGCTCTCCCTGAGCTGTGTTTGTCATGTTATGGGACCAATTCTTTTGATGATGATGATAGTAGAGGTTTCCAAGCGCACCACTAGCCGATATTGTCCTCTTTGGACTTTTTCTTTCGGGCTTTCCCTCAAGGTTTTTAAAATGCGTATGATAGGGAGAGGTTTCCACACCCTTATTGATGTGGTATCTTATATTCCACCCCCTTCAAGCTCAATGTCCTCGCCGGCACTCGTTCCTCTCTCCAATCGATGTGGGATCTCACAATCCACCCCCTTTCAAAGCCCAACGTTCTCGCTGACACTCGTTCCTCTCTCCAATCGATGTGTGATCACACAATCCACCCCCATTTGAGACCCACCGTCCTCGCTGGCACTCGTTCCTATCTCCAATCGATGTGGGAACTCACAATCCACCCCCCTTTGAGCCAGCGTCCTCGCTGGCACACCGCTCGGTGTCTGGCTCTGATACCATTTGTAGCAGCTCAAGCCCACCACTAGCAGATATTGTCTTCTTTGGGCTTTCTCTTTCGGGTTCCCCTCAAGGTTTTTAAAACGCATATGCTAGGGAGAGATTTCCACACCTTTATATAAAATGCTTCCACACCCTTATATAAAATGCTTCCACACCCTTATATAAAATGCTTTGTTCCCATCTTCAATCGATGTGGGATCTCACAATCCCACTCCCCTTCGAGACCCAGCGTCCTCGTTGCCACTCATTCCTTTCTCCAATCGATGTGGGATCTCATAATCCACCCCCCTCCAGGCCTAGCGTCCTCGTTGGCACACCGTCAGTGTCTGGCTCTGATATCATTTGTAACAACTCAAATCACCCCTAGCAGATATTGCCCTCTTTAGGCTTTTCCTTTCGGGCTTCCCTTGAAGGTTTTTAAAACGCGTATGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCGTTTCCTTCTCCAATCGACGTGGGATCTCACAGTAATACAACATACCTATTTGGTGTAACTTCCTAAACATACCTATTTGGTGTAACTTCCTAAACAGAAAGCCTTATAAACTTTGCATCTGTACTGAATTTTATGTGTTGGAGGAAGAAGTTTTTCGTTGAAATGGAATCTGTTCTGTGGTTGCATGTACTAATGCAACCGATGAATTTGCTACTCATTCTCTTGTATGGTATTCATGTAACATAGAAGTCTCCTTATATATAGCCTGCAAGGGTGGCTCTGAAATCAGGATGCGAGGGAATAGCGGCCATCAACACGATCATGAGTGTAATGGGAATCGATCTCAAGACCTTACGTCCCGAGCCTTGTGTCGAGGGGTTGGTTAATTCAAACTCTTCAATATAGAATGGTTGCGTATTGAATGCATTCAGCTACAATGTTTGATGTGCTTTATTGTTAGGTACTCAACTCCTGGAGGCTACTCTTCCAAGGCAGTTCATCCTATTGCTCTTGGTAAAGTGTTGAGCATTGCAAAAATGATGAAGGCAGAGTTTAATGATGCAGACTACTCTCTTTCTGGCATTGGGGGTGTTGAAACCGGTGGAGACGCTGCCGAGTTTATTCTACTCGGAGCTAACTCTGTTCAGGTACAATGAGAAATTGTAGCCTATGGTTTGTTTGGCGCGTTTTCAAGCTTTAACATAGTGAGGATTTGTTCATGAAATCATAAATTTGGGCATCAATTTTCTGTTGTGATTTCTGCTTAAGAACTAAGACTCTTACTTGTTTACATTTCCACTTAGTCTCGTTTACTTCTTCTTAACCTGAATGATCGAGTTAGAATCAATGTGAGATTCTATATCGGTTGGAGAAGGGAACAAAGCATTCCTTATAAGGGTGTGGAAATCTCTCCCTAATAGACGCATTTTAAAACCTTGAAGGGAAGCCCAAAGAGGATATCTGCTAGCGATAGGCTTAGACTGTCACAAATGATATCAGAGTCAGATACTGTGTAGTGTGCCACCGAGGACGCTTGGGCTACTAAGAGGGGTGGATTGTGAGATCCCATGTCGGTTGGAGAGGGGAACGAAACATTTCTTATAGGATGTGGAAACCTCTCCCGAATAGACGTGTTTTAAAACCTTGAAGGGAAGTTCAGAAGGGAAGCCCAAAGAGGATATCTGCTAGCGGTAGGTTGAGCTGTCACAAATGGTATCAGAGTCATACACCATTTGGTGTGCCAGCGAGGACGCTTGGGCCCTCTAGGGGGTGGATTATGAGATCCCACATTGGTTGGAGAGAGGAACGAAGCATTTCTTATAAGGGTGTGGAAGTCTCTTCCTATTAGGCCCGTTTTAAAGCCTTGAAGGGAAGCTTATAAGAGAATAATATCCGTTAGCGGTGGGCTTGGGCTGTTACAATCCGTTGCGGTTATTGGTATTATGAGTAAGTTTTGTTGATCTTCAGGTGTGTACCGGAGTGATGATGCATGGGTATGGCCTTGTAAAGAAGCTTTGTGCAGAGCTGATGGACTTCATGAAACTTCACAACTTCTCATCCATAGAAGATTTCAGAGGGTAAGTTTGTAGTTCTGTATAGGATACAAGTCGAGTCCCTCGAACGTCGGTTGCGTTAATGGATTCTGGATGAAACAGGGCTTCTCTTCCGTATTTCACGACCCACACGGATTTGGTTCGGAGGCAGCGGGAAGCAATCGAGCAGAGAAAAGCTGTGAAGAAAGGGCTGCAATCTGATAAAGATTGGACTGGCGATGGCTTTGTTAAAGAGACAGAGAGTATGGTTTCCAACTGAGCATTGCCATTACAAATGGTGTCTTTATCCCTTCCTTTCTCTTAAAGGGCGACGAATAAGTGTATTACTACAGAACAATTTAGCAAGTATGGTAAACCTTTGTAGATTCATAAATGAAGGAATAATGACCATTTATAATTCTTCCTTGATAGTCATTTCTTGGATGTATGACAACGAATTGACTGATTCTAGTTTTGTAACAGCTCAAGCACACCGCTAGCACATATTGTCCGCTTCAACTTATTACGTATCATCATCAGCCTCATAGTTTTGACATCATCATCAGCCTCATGGTTTTGACATCATCATCAGCCTCATGGTTTTGACTGTGACTGTCAGGGACAGGTTTTTAGGCCCTTCTAACAAATGTTTCATTCGTCTCTCCCATCCATGTGGGATCTCACAATCTTACCCCCTTGAGAGACCAGCGTTTGGGATCTCACAACCTACCCTTGAGAGGCCCAACGTTCTTGTTGGCACACGGCTCGATGTCCAACTTTGATACCATTTGTAACCAGTCCAAATCCTCGTTTGGGATCTCACAACCTACCCCTGAGGGGCCCGACGTCCTTGTTGGCGCACAACTCGATGTCTAGCTTTAATACCATTTGTAACAGTCCAAATAGTCCAAATCCACCACTACTAGCTATTGTCCGTTTTAGCCCATTACGTGTTGCTGTCAGCCTCGCAGTTTTAAAATGACATTAGAGGTTTTCATACCCTTACCAGAAATGCTTTAGAGAGAAGTTTCCATACCCTTGCAAGAAACAAGAAACGTATTTGTTCATCAAATTCTATGTCATTCAACATATAGCTTTGGAAAGTTAAAAAAGGAAGAAACCTAAAACAAAATCAAAGTATAGGTTGAAATAAATCAAAGTACAGTGCAAAACTTCATATTATTATATGTTCTGAAATACTTGGTGGAACTCAAAACTATGGAAAGAATTAGAACAGATATATCTTCGGTACATAAAGGCCGCATCGGCAGAGCAGCTGGAAAAGATGGCCTTTTGATCTTTATGCCATATCAAACCCTATGGTGTTGTAAAATCTAACATCCTACATCGAATTATTCTCTCAAAAAACATGTATTACCTACAAACTTAGTTTCAAACTCGAACCGCCTCCGAACGAAAACACGTTCGAATATAGTGATGAAAAATGAAAAATATAAGGACAGGAAGGCTGCACCAAACATCCAACACTATTACCTCATGGGGAGTGAGTCTTCTTCACCGTCTACTTTTATTTATCACCATGGAAGTTTCCATCGTTTCAGTCATAAGCTTTCTCCCAATCATCTGCCACTTCAGACATGTTTGTTTCATTATCTGCTACAACCTGCGTTCCCAAAGAATTCAAACTTCTACTTGTGCCTGATTCAGATCCTGAAGAAGAGGAACGCCCTACCCGACTTCCAGGATTGTGTTCGACAGATTGAGCAGAAGAACTTCCAGCAGATTCGGGGTCTAAAGCGTGCCACCGATTAATTGAAGCAGGTAGGGGAGCTTCTCTTTTCCATACGGATGCCTGCACGTCGATAGACGGACCAGACCACTCTTCGTCACCCCATGAAGTCTCCTTCCAACTAGAATCCTGAACTACGGCCCTTTTCCATGGATTGCTACTCTTCAATGCTCCACCTTCCTTGTTAGCATTCTCCCCTCCCCACGCATTTCCATTAGATGATGCGGATGCACCACCATTCTGAAGAAAACTGGCTCCATGATAAGCTGTCCCATGATCCAACCGTCTCATTGCAGTAGCAGCTCGAGCAGGATCGCTGAATACAGCCAACGCGTTCTTGTCGTTCAACCATACTAATTCACATTCCCCACCAAATCTCAAGACCAATGCACTTATATCTGCTTCCCGAGGCAAATCTGGAAAAGAAACAACTAGCCTAGGATCCATATCTACTAAAGGATCGTAAGCTGGTGGGTGTGGAGTACTTGTGGTCGTCGAGCCCTTAATACCAAGCACCCGAGGCGGAACTTTTGATTTAGGAGTAACATGAATTGCTATGAAACGTTTAGGCTCCCAGCCAACAGAGTTAATTGCAAGCTTCCACCTCTCAGCAATCAGCCTCACAGCATCTCTTTTGTCCTTCGGCATTGGACAGAAAACATGAACTTTAAGGCCACTCATTGCTCCTCTATTCTTTCCAAGGACCAAGAATTTGCATCTCTCCTCCACAGACAATACCCATTTCGAGTCACGTCTGAAGAGGTCTGCAAGCAATTCAGAAGCGGAGCTATCCCCGAAGTGAAGCGCATCCAGATTTGGGGGATTGATATCAAAAGCATCAGCAAGAACCCGTTTCCTTTCTAGCTTAGAGCATTCATCATCACACATCAGCTTTCTCTGTCCTAGAGGAACCTTCTTGCTGGTTGCCTCAATCGGTTGAAGAGGAGCAGGTAATTTTTGGATAATTGAAGTATACAGAGTATCAGTATTAAAACCAGTACCGCTTCCTCCTGCATCGCAAGGAACTGATGCTGTGATTCGGCCACATGAACAAGTGATGATGACAGGGAATTCACACCTCGCATCGGGGCAAGGAGCAGACCGGTGACATGGTGCAGTACATGTATGCCTACAATCTCTTCGAGGAGCACCACATGTCTGTCCACAGGAAGTTTTCTGACCCGAATCGGATCCAGCAGAGGTGTCACATGGCGGTGGGTGACAAGTTCTGTTGCAGGCATGTATCCCACATTGCCTAGTCTTCCCACATAGCTTGTTGCATCTGATGTCCCTCGAACCGCAAGGAATGTTCCTAAGAACTACATGTCCACCAATGCACTCCTTGGCTATTGGAACTGTACAGGGTGGACAATCACCAAAGTGGCAACTATGTGTAGAGGAATGGCCGCATGGCTGAGGGACTGAACACGGGAGTTGACACGATGGAGGTGGCGTTCCACAGGGCAATGGTGGAGGAATTGAAGTTTTACCACAAGCACATGTCAAGTCAGTGAAGATTGTTTCGGGACATGGAGAGCAGTGGCCACTGTGACACAGTGATTCACAAGAATGCTGGCCACACCTTAGTTTCTTCCCACACCTCAATACACAGAAGTGTGGATCCCAATCTCCTGAATGACTATAGCTCGAGTTCGAAAGAGGACAACATCTCTCACTGCACCTATGCCTTCCACAATTCTTCTTCCATCCGCAGGGCTTTTCACAAGTGAATATGTCAGTTGGGCTGGAAGTCTTATAGCATTCCACATTTTGAGAGGTCGATCCACATCGGCATTTTTGCACAACTTGAACCAAGCAAGGTGCACAATCCCCAGCATGACAGACATCCTTACAACGATGCTTCCCACAAGGTAATAGTTTCTCACAGAGCTCAGAACATACTGGGATCGGGTCCAAACAACTTGTCCGCTCCTTCTGCAATGGCGTTTTCCCACAATAGCATGTTTTAATCATGTCCGGTACTAGAACACAACCTCCACAGGGTCCTGGGTGACAAATTTCACTGCAGAAATGATTCCTGCAATTAAGAATCTTCCCGCAGATCGAACTACAGGGGAAAACGCCATCTTCTGCATTTACTACACCCTTCAAAGTTATGCTTCCACAAAGAACAAGCTCTTTCTTTTTCTTACAAAAGCAAGAGGCACTAATTAGAACCTGACAAGAATCACATGGACCCAAATGGCATATTTTTTCACACCGGTGATGTCCACAGTCCAGAAGTTTTTCACATCGCTGACCACAAGTTAAAGTGGATTTTCTATCCGAACAGCGTGTTGTTATCAACTTCTTGCCACAAGGGCATAAACGAGGCGGAGCAAATGCCTTGCAAGGAGGGCAGGGACCAGGATGGCACTGCAAGACACAATTATGGGGGCAAAGATTCTCCTTACTTCCACCTGCAATCAGCATCTCCCGATCAAGTGGCTTGCCACAAGGTTCGCCACACGAATGAGGCGTCAAATACAAATCAGACTGGGGCTCCTGCCTTTTCCCACAGAAACAAACATAACGAATTTCCTTTGAGGATGTAAGCTGCACAGACTGGCATCCAGGGCAGCGCCAATTTAATCCCTGATTCTTCTCAGCTACCAAGTCGGTAGAAGTGGGTGCTCTAGCCCATTTCTTGATGCAAGTTAAATGAAAAATGCAGAAGCAGCTTGAACAAGACCATATAGGTGCAGATCTCCGCACCATATCATAACAAATCATACACTCAACAGTGCCCTTCGTTAATTTTTCCTGAATTTCATGAACAAGCTGAGGCAAATTGGAGTTTCTCAACTCCTTTACACCCTGATCCCCACTTTTCTCCTTATCTTTTTCCTTGTCTTTTCTTTGATTCCTTCGAGGACCCATGTGAACCCTTGGACCATGATTACCTCCGTCTCGATTAACTGGATGTGGACTAGAATTTAACTCTCGCCCATCGCGATTATCGCTCAAACCGACATTCAATGGCTGGTTCACATGAGTAGCCGTCGTCGTAGTCGTAGTAGTAGTCGTAGTCGTGGATCCTCTCGGTACCCACGTTTGTCGAGCACTTGATGCGGGAAACCTAAGCCTGTCCTTTCGCACATTTCGGACATGCGAGCTCATATTCTACAATAGAAAAATCAGATAAACGAACAAAAGGAGTTAATCAACAAATAAACATCGATCGAAACA

mRNA sequence

TTTTTTTTTTTTTTTTTTTTTTGGATTAATAAATATTACAAATTAATTCTTAGGAAATAGGGGGAGTGGTTAACTCATTATCCCTTAATTACCTAAAAATTAGAAAAATGGATAATTTGACCGAATGAATATTCATCTGGGGATTGTTAATTCGATCATCATTCATCATTATAAAATTCATTAATATTCTGAATCCAAAAGCAAGCCGACGATGACGATTCTTCCTGCCCCATCTTCTTAATCGAATATTACACCTCAGATTCACTCACCCATCTTCTTCTTCTTCTGAATCACCTCTGGATTTCTTCATCCATGGCGTCGTTGAATTTCACCCAAATCAGAAGCAGAAACCCAATTTCCGACCTCACTCTGACTCGGTCTCAGACGGGTTTGGCTCGTCGGACTCGAGTTGGGTTCAAAGTGGTTGCCGCCAGTGAGTCTCCGGTGGAGCCCGATCTCAGTGTGACGGTCAATGGGTTGCACATGCCCAACCCGTTCGTAATCGGTTCCGGTCCTCCGGGAACAAACTACACGGTTATGAAGAGGGCATTCGATGAAGGGTGGGGGGCTGTGATCGCCAAAACTGTATCATTAGATGCAGCTAAAGTTATAAACGTTACTCCACGATATGCTCGGCTTCGAGCGGATTCGAATGGTTCTGCAAAAGGGCAGATTATAGGGTGGGAGAACATTGAATTGATAAGTGATAGACCTCTTGAAACTATGTTGAAAGAGTTTAAGCAGTTGAAGGAGGAGTATCCTGATAGGATTCTTATTGCTTCGATCATGGAGGAGTATAATAAAGCTGCTTGGGAAGAACTTATCGATCGAGTCGAACAAACCGGAGTTGATGCATTTGAAATCAATTTCTCGTGTCCTCATGGCATGCCCGAACGGAGAATGGGCGCTGCGGTCGGGCAGGATTGCGCGCTTTTGGAAGAGGTTTGTGGATGGATAAATGCTAAAGCTACAATCCCTGTGTGGGCTAAAATGACTCCCAATATCACTGACATTGCACAGCCTGCAAGGGTGGCTCTGAAATCAGGATGCGAGGGAATAGCGGCCATCAACACGATCATGAGTGTAATGGGAATCGATCTCAAGACCTTACGTCCCGAGCCTTGTGTCGAGGGGTACTCAACTCCTGGAGGCTACTCTTCCAAGGCAGTTCATCCTATTGCTCTTGGTAAAGTGTTGAGCATTGCAAAAATGATGAAGGCAGAGTTTAATGATGCAGACTACTCTCTTTCTGGCATTGGGGGTGTTGAAACCGGTGGAGACGCTGCCGAGTTTATTCTACTCGGAGCTAACTCTGTTCAGAAGCTTTGTGCAGAGCTGATGGACTTCATGAAACTTCACAACTTCTCATCCATAGAAGATTTCAGAGGGGCTTCTCTTCCGTATTTCACGACCCACACGGATTTGGTTCGGAGGCAGCGGGAAGCAATCGAGCAGAGAAAAGCTGTGAAGAAAGGGCTGCAATCTGATAAAGATTGGACTGGCGATGGCTTTGTTAAAGAGACAGAGAGTATGGTTTCCAACTGAGCATTGCCATTACAAATGGTGTCTTTATCCCTTCCTTTCTCTTAAAGGGCGACGAATAAGTGTATTACTACAGAACAATTTAGCAAGTATGGTAAACCTTTGTAGATTCATAAATGAAGGAATAATGACCATTTATAATTCTTCCTTGATAGTCATTTCTTGGATGTATGACAACGAATTGACTGATTCTAGTTTTGTAACAGCTCAAGCACACCGCTAGCACATATTGTCCGCTTCAACTTATTACGTATCATCATCAGCCTCATAGTTTTGACATCATCATCAGCCTCATGGTTTTGACATCATCATCAGCCTCATGGTTTTGACTGTGACTGTCAGGGACAGGTTTTTAGGCCCTTCTAACAAATGTTTCATTCGTCTCTCCCATCCATGTGGGATCTCACAATCTTACCCCCTTGAGAGACCAGCGTTTGGGATCTCACAACCTACCCTTGAGAGGCCCAACGTTCTTGTTGGCACACGGCTCGATGTCCAACTTTGATACCATTTGTAACCAGTCCAAATCCTCGTTTGGGATCTCACAACCTACCCCTGAGGGGCCCGACGTCCTTGTTGGCGCACAACTCGATGTCTAGCTTTAATACCATTTGTAACAGTCCAAATAGTCCAAATCCACCACTACTAGCTATTGTCCGTTTTAGCCCATTACGTGTTGCTGTCAGCCTCGCAGTTTTAAAATGACATTAGAGGTTTTCATACCCTTACCAGAAATGCTTTAGAGAGAAGTTTCCATACCCTTGCAAGAAACAAGAAACGTATTTGTTCATCAAATTCTATGTCATTCAACATATAGCTTTGGAAAGTTAAAAAAGGAAGAAACCTAAAACAAAATCAAAGTATAGGTTGAAATAAATCAAAGTACAGTGCAAAACTTCATATTATTATATGTTCTGAAATACTTGGTGGAACTCAAAACTATGGAAAGAATTAGAACAGATATATCTTCGGTACATAAAGGCCGCATCGGCAGAGCAGCTGGAAAAGATGGCCTTTTGATCTTTATGCCATATCAAACCCTATGGTGTTGTAAAATCTAACATCCTACATCGAATTATTCTCTCAAAAAACATGTATTACCTACAAACTTAGTTTCAAACTCGAACCGCCTCCGAACGAAAACACGTTCGAATATAGTGATGAAAAATGAAAAATATAAGGACAGGAAGGCTGCACCAAACATCCAACACTATTACCTCATGGGGAGTGAGTCTTCTTCACCGTCTACTTTTATTTATCACCATGGAAGTTTCCATCGTTTCAGTCATAAGCTTTCTCCCAATCATCTGCCACTTCAGACATGTTTGTTTCATTATCTGCTACAACCTGCGTTCCCAAAGAATTCAAACTTCTACTTGTGCCTGATTCAGATCCTGAAGAAGAGGAACGCCCTACCCGACTTCCAGGATTGTGTTCGACAGATTGAGCAGAAGAACTTCCAGCAGATTCGGGGTCTAAAGCGTGCCACCGATTAATTGAAGCAGGTAGGGGAGCTTCTCTTTTCCATACGGATGCCTGCACGTCGATAGACGGACCAGACCACTCTTCGTCACCCCATGAAGTCTCCTTCCAACTAGAATCCTGAACTACGGCCCTTTTCCATGGATTGCTACTCTTCAATGCTCCACCTTCCTTGTTAGCATTCTCCCCTCCCCACGCATTTCCATTAGATGATGCGGATGCACCACCATTCTGAAGAAAACTGGCTCCATGATAAGCTGTCCCATGATCCAACCGTCTCATTGCAGTAGCAGCTCGAGCAGGATCGCTGAATACAGCCAACGCGTTCTTGTCGTTCAACCATACTAATTCACATTCCCCACCAAATCTCAAGACCAATGCACTTATATCTGCTTCCCGAGGCAAATCTGGAAAAGAAACAACTAGCCTAGGATCCATATCTACTAAAGGATCGTAAGCTGGTGGGTGTGGAGTACTTGTGGTCGTCGAGCCCTTAATACCAAGCACCCGAGGCGGAACTTTTGATTTAGGAGTAACATGAATTGCTATGAAACGTTTAGGCTCCCAGCCAACAGAGTTAATTGCAAGCTTCCACCTCTCAGCAATCAGCCTCACAGCATCTCTTTTGTCCTTCGGCATTGGACAGAAAACATGAACTTTAAGGCCACTCATTGCTCCTCTATTCTTTCCAAGGACCAAGAATTTGCATCTCTCCTCCACAGACAATACCCATTTCGAGTCACGTCTGAAGAGGTCTGCAAGCAATTCAGAAGCGGAGCTATCCCCGAAGTGAAGCGCATCCAGATTTGGGGGATTGATATCAAAAGCATCAGCAAGAACCCGTTTCCTTTCTAGCTTAGAGCATTCATCATCACACATCAGCTTTCTCTGTCCTAGAGGAACCTTCTTGCTGGTTGCCTCAATCGGTTGAAGAGGAGCAGGTAATTTTTGGATAATTGAAGTATACAGAGTATCAGTATTAAAACCAGTACCGCTTCCTCCTGCATCGCAAGGAACTGATGCTGTGATTCGGCCACATGAACAAGTGATGATGACAGGGAATTCACACCTCGCATCGGGGCAAGGAGCAGACCGGTGACATGGTGCAGTACATGTATGCCTACAATCTCTTCGAGGAGCACCACATGTCTGTCCACAGGAAGTTTTCTGACCCGAATCGGATCCAGCAGAGGTGTCACATGGCGGTGGGTGACAAGTTCTGTTGCAGGCATGTATCCCACATTGCCTAGTCTTCCCACATAGCTTGTTGCATCTGATGTCCCTCGAACCGCAAGGAATGTTCCTAAGAACTACATGTCCACCAATGCACTCCTTGGCTATTGGAACTGTACAGGGTGGACAATCACCAAAGTGGCAACTATGTGTAGAGGAATGGCCGCATGGCTGAGGGACTGAACACGGGAGTTGACACGATGGAGGTGGCGTTCCACAGGGCAATGGTGGAGGAATTGAAGTTTTACCACAAGCACATGTCAAGTCAGTGAAGATTGTTTCGGGACATGGAGAGCAGTGGCCACTGTGACACAGTGATTCACAAGAATGCTGGCCACACCTTAGTTTCTTCCCACACCTCAATACACAGAAGTGTGGATCCCAATCTCCTGAATGACTATAGCTCGAGTTCGAAAGAGGACAACATCTCTCACTGCACCTATGCCTTCCACAATTCTTCTTCCATCCGCAGGGCTTTTCACAAGTGAATATGTCAGTTGGGCTGGAAGTCTTATAGCATTCCACATTTTGAGAGGTCGATCCACATCGGCATTTTTGCACAACTTGAACCAAGCAAGGTGCACAATCCCCAGCATGACAGACATCCTTACAACGATGCTTCCCACAAGGTAATAGTTTCTCACAGAGCTCAGAACATACTGGGATCGGGTCCAAACAACTTGTCCGCTCCTTCTGCAATGGCGTTTTCCCACAATAGCATGTTTTAATCATGTCCGGTACTAGAACACAACCTCCACAGGGTCCTGGGTGACAAATTTCACTGCAGAAATGATTCCTGCAATTAAGAATCTTCCCGCAGATCGAACTACAGGGGAAAACGCCATCTTCTGCATTTACTACACCCTTCAAAGTTATGCTTCCACAAAGAACAAGCTCTTTCTTTTTCTTACAAAAGCAAGAGGCACTAATTAGAACCTGACAAGAATCACATGGACCCAAATGGCATATTTTTTCACACCGGTGATGTCCACAGTCCAGAAGTTTTTCACATCGCTGACCACAAGTTAAAGTGGATTTTCTATCCGAACAGCGTGTTGTTATCAACTTCTTGCCACAAGGGCATAAACGAGGCGGAGCAAATGCCTTGCAAGGAGGGCAGGGACCAGGATGGCACTGCAAGACACAATTATGGGGGCAAAGATTCTCCTTACTTCCACCTGCAATCAGCATCTCCCGATCAAGTGGCTTGCCACAAGGTTCGCCACACGAATGAGGCGTCAAATACAAATCAGACTGGGGCTCCTGCCTTTTCCCACAGAAACAAACATAACGAATTTCCTTTGAGGATGTAAGCTGCACAGACTGGCATCCAGGGCAGCGCCAATTTAATCCCTGATTCTTCTCAGCTACCAAGTCGGTAGAAGTGGGTGCTCTAGCCCATTTCTTGATGCAAGTTAAATGAAAAATGCAGAAGCAGCTTGAACAAGACCATATAGGTGCAGATCTCCGCACCATATCATAACAAATCATACACTCAACAGTGCCCTTCGTTAATTTTTCCTGAATTTCATGAACAAGCTGAGGCAAATTGGAGTTTCTCAACTCCTTTACACCCTGATCCCCACTTTTCTCCTTATCTTTTTCCTTGTCTTTTCTTTGATTCCTTCGAGGACCCATGTGAACCCTTGGACCATGATTACCTCCGTCTCGATTAACTGGATGTGGACTAGAATTTAACTCTCGCCCATCGCGATTATCGCTCAAACCGACATTCAATGGCTGGTTCACATGAGTAGCCGTCGTCGTAGTCGTAGTAGTAGTCGTAGTCGTGGATCCTCTCGGTACCCACGTTTGTCGAGCACTTGATGCGGGAAACCTAAGCCTGTCCTTTCGCACATTTCGGACATGCGAGCTCATATTCTACAATAGAAAAATCAGATAAACGAACAAAAGGAGTTAATCAACAAATAAACATCGATCGAAACA

Coding sequence (CDS)

ATGGCGTCGTTGAATTTCACCCAAATCAGAAGCAGAAACCCAATTTCCGACCTCACTCTGACTCGGTCTCAGACGGGTTTGGCTCGTCGGACTCGAGTTGGGTTCAAAGTGGTTGCCGCCAGTGAGTCTCCGGTGGAGCCCGATCTCAGTGTGACGGTCAATGGGTTGCACATGCCCAACCCGTTCGTAATCGGTTCCGGTCCTCCGGGAACAAACTACACGGTTATGAAGAGGGCATTCGATGAAGGGTGGGGGGCTGTGATCGCCAAAACTGTATCATTAGATGCAGCTAAAGTTATAAACGTTACTCCACGATATGCTCGGCTTCGAGCGGATTCGAATGGTTCTGCAAAAGGGCAGATTATAGGGTGGGAGAACATTGAATTGATAAGTGATAGACCTCTTGAAACTATGTTGAAAGAGTTTAAGCAGTTGAAGGAGGAGTATCCTGATAGGATTCTTATTGCTTCGATCATGGAGGAGTATAATAAAGCTGCTTGGGAAGAACTTATCGATCGAGTCGAACAAACCGGAGTTGATGCATTTGAAATCAATTTCTCGTGTCCTCATGGCATGCCCGAACGGAGAATGGGCGCTGCGGTCGGGCAGGATTGCGCGCTTTTGGAAGAGGTTTGTGGATGGATAAATGCTAAAGCTACAATCCCTGTGTGGGCTAAAATGACTCCCAATATCACTGACATTGCACAGCCTGCAAGGGTGGCTCTGAAATCAGGATGCGAGGGAATAGCGGCCATCAACACGATCATGAGTGTAATGGGAATCGATCTCAAGACCTTACGTCCCGAGCCTTGTGTCGAGGGGTACTCAACTCCTGGAGGCTACTCTTCCAAGGCAGTTCATCCTATTGCTCTTGGTAAAGTGTTGAGCATTGCAAAAATGATGAAGGCAGAGTTTAATGATGCAGACTACTCTCTTTCTGGCATTGGGGGTGTTGAAACCGGTGGAGACGCTGCCGAGTTTATTCTACTCGGAGCTAACTCTGTTCAGAAGCTTTGTGCAGAGCTGATGGACTTCATGAAACTTCACAACTTCTCATCCATAGAAGATTTCAGAGGGGCTTCTCTTCCGTATTTCACGACCCACACGGATTTGGTTCGGAGGCAGCGGGAAGCAATCGAGCAGAGAAAAGCTGTGAAGAAAGGGCTGCAATCTGATAAAGATTGGACTGGCGATGGCTTTGTTAAAGAGACAGAGAGTATGGTTTCCAACTGA

Protein sequence

MASLNFTQIRSRNPISDLTLTRSQTGLARRTRVGFKVVAASESPVEPDLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVDAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPARVALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKMMKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQKLCAELMDFMKLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETESMVSN

Homology

[Close]

BLAST of Cp4.1LG09g10960 vs. ExPASy Swiss-Prot
Match: Q9LVI9 (Dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PYD1 PE=1 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 4.4e-188
Identity = 337/429 (78.55%), Postives = 370/429 (86.25%), Query Frame = 0


Query: 1   MASLNFTQIRSRNPISDLTLTRSQTGLARR-----TRVGFKVVAASESPVEPDLSVTVNG 60
           MAS++F   R     S  TL+      +RR     TRVG K+ +A+ES  EPDLSVTVNG
Sbjct: 1   MASMSFALNRFSGLSSKTTLSADFDPSSRRSFLPPTRVGLKISSAAES--EPDLSVTVNG 60

Query: 61  LHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNG 120
           L MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDA+KVINVTPRYARLR  SNG
Sbjct: 61  LKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDASKVINVTPRYARLRTGSNG 120

Query: 121 SAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVE 180
           SAK  +IGW+NIELISDRPLETMLKEF++LK+EYPDRILIAS+MEEYNK AWEELIDRVE
Sbjct: 121 SAKTDVIGWQNIELISDRPLETMLKEFERLKKEYPDRILIASVMEEYNKTAWEELIDRVE 180

Query: 181 QTGVDAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIA 240
           QTGVDA EINFSCPHGMPERRMGAAVGQDCALL+EVCGWINAKAT+PVWAKMTPNITDI 
Sbjct: 181 QTGVDALEINFSCPHGMPERRMGAAVGQDCALLDEVCGWINAKATVPVWAKMTPNITDIT 240

Query: 241 QPARVALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVL 300
           +PARV+LKSGCEGIAAINTIMSVMGID+KTLRPEPCVEGYSTPGGYS KAV PIAL KV+
Sbjct: 241 EPARVSLKSGCEGIAAINTIMSVMGIDMKTLRPEPCVEGYSTPGGYSYKAVRPIALAKVM 300

Query: 301 SIAKMMKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ--------------KLCAE 360
           +IAKMMK+EF++ D SLSGIGGVETG DAAEFILLG+N+VQ               LCAE
Sbjct: 301 NIAKMMKSEFSE-DRSLSGIGGVETGYDAAEFILLGSNTVQVCTGVMMHGYGHVKTLCAE 360

Query: 361 LMDFMKLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFV 411
           L DFMK HNFS+IE+FRG SL YFTTHTDLV+RQ+EA+EQRKA K+GL+SDKDWTGDGFV
Sbjct: 361 LKDFMKQHNFSTIEEFRGHSLQYFTTHTDLVKRQKEAVEQRKAEKRGLKSDKDWTGDGFV 420

[Close]

BLAST of Cp4.1LG09g10960 vs. ExPASy Swiss-Prot
Match: Q8X643 (NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS=Escherichia coli O157:H7 OX=83334 GN=preA PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 7.7e-60
Identity = 129/289 (44.64%), Postives = 175/289 (60.55%), Query Frame = 0


Query: 48  DLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYA 107
           DLS+T  G+  PNPF + S P G  Y +  +A+D GWG V+ KT+    A    V+PR+ 
Sbjct: 7   DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 66

Query: 108 RLRADSNGSAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAW 167
            L  +  G      IG++N+E I++ PLE  L   ++LKE+YPD++LIASIM E N+  W
Sbjct: 67  HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 126

Query: 168 EELIDRVEQTGVDAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKM 227
           EEL   V++ G D  E NFSCP  M    MG+ VGQ   L+E+ C  +   +T+P+ AKM
Sbjct: 127 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 186

Query: 228 TPNITDIAQPARVALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVH 287
           TPNI D+ + A  A + G +GIAAINT+ S+  IDL      P V G S+  GYS KAV 
Sbjct: 187 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 246

Query: 288 PIALGKVLSIAKMMKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ 337
           PIA    L   + M+      D+ +SGIGG+ET  DAAEF+LLGA ++Q
Sbjct: 247 PIA----LRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQ 282

[Close]

BLAST of Cp4.1LG09g10960 vs. ExPASy Swiss-Prot
Match: P25889 (NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS=Escherichia coli (strain K12) OX=83333 GN=preA PE=1 SV=3)

HSP 1 Score: 232.6 bits (592), Expect = 7.7e-60
Identity = 129/289 (44.64%), Postives = 175/289 (60.55%), Query Frame = 0


Query: 48  DLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYA 107
           DLS+T  G+  PNPF + S P G  Y +  +A+D GWG V+ KT+    A    V+PR+ 
Sbjct: 5   DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 64

Query: 108 RLRADSNGSAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAW 167
            L  +  G      IG++N+E I++ PLE  L   ++LKE+YPD++LIASIM E N+  W
Sbjct: 65  HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 124

Query: 168 EELIDRVEQTGVDAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKM 227
           EEL   V++ G D  E NFSCP  M    MG+ VGQ   L+E+ C  +   +T+P+ AKM
Sbjct: 125 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 184

Query: 228 TPNITDIAQPARVALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVH 287
           TPNI D+ + A  A + G +GIAAINT+ S+  IDL      P V G S+  GYS KAV 
Sbjct: 185 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 244

Query: 288 PIALGKVLSIAKMMKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ 337
           PIA    L   + M+      D+ +SGIGG+ET  DAAEF+LLGA ++Q
Sbjct: 245 PIA----LRFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQ 280

[Close]

BLAST of Cp4.1LG09g10960 vs. ExPASy Swiss-Prot
Match: Q8ZNL7 (NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=preA PE=3 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.5e-58
Identity = 127/289 (43.94%), Postives = 175/289 (60.55%), Query Frame = 0


Query: 48  DLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYA 107
           DLSVT  G+  PNPF + S P G  Y +  +A+D GWG ++ KT+    A    V+PR+ 
Sbjct: 5   DLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIAN--EVSPRFD 64

Query: 108 RLRADSNGSAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAW 167
            L  +  G      IG++N+E I++ PLE  L   ++LK++YPD++LIASIM E N+  W
Sbjct: 65  HLTKEDTG-----FIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGE-NEQQW 124

Query: 168 EELIDRVEQTGVDAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKM 227
           +EL   VE+ G D  E NFSCP  M    MG+ VGQ   L+E+ C  +   +++P+ AKM
Sbjct: 125 QELARLVEEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKM 184

Query: 228 TPNITDIAQPARVALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVH 287
           TPNI D+ + A  A + G +GIA INT+ S+  IDL      P V G S+  GYS KAV 
Sbjct: 185 TPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVK 244

Query: 288 PIALGKVLSIAKMMKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ 337
           PIAL  +  +   M  E    D+ +SGIGG+ET  DAAEF+LLGA ++Q
Sbjct: 245 PIALRFIQQL--RMHPELR--DFPISGIGGIETWEDAAEFLLLGAATLQ 280

[Close]

BLAST of Cp4.1LG09g10960 vs. ExPASy Swiss-Prot
Match: Q8CHR6 (Dihydropyrimidine dehydrogenase [NADP(+)] OS=Mus musculus OX=10090 GN=Dpyd PE=1 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.2e-56
Identity = 123/316 (38.92%), Postives = 178/316 (56.33%), Query Frame = 0


Query: 48  DLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYA 107
           D+SV + GL  PNPF + S  P T+  +++RAF+ GWG  + KT SLD   V NV+PR  
Sbjct: 532 DISVEMAGLRFPNPFGLASATPATSTPMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRII 591

Query: 108 RLRADSNGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEY 167
           R      G+  G + G     + NIELIS++          +LK ++PD ILIASIM  Y
Sbjct: 592 R------GTTSGPLYGPGQSSFLNIELISEKTAAYWCHSVTELKADFPDNILIASIMCSY 651

Query: 168 NKAAWEELIDRVEQTGVDAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIP 227
           NK+ W EL    E +G DA E+N SCPHGM ER MG A GQD  L+  +C W+     +P
Sbjct: 652 NKSDWMELSKMAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVRVP 711

Query: 228 VWAKMTPNITDIAQPARVALKSGCEGIAAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGY 287
            +AK+TPN+TDI   AR A + G +G+ A NT+  +MG+    T  P   +   +T GG 
Sbjct: 712 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGIGRRTTYGGV 771

Query: 288 SSKAVHPIALGKVLSIAKMMKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQKLCAE 347
           S  A+ PIAL  V +IA+ +        + +   GG+++     +F+  GA SV ++C+ 
Sbjct: 772 SGTAIRPIALRAVTAIARALPG------FPILATGGIDSAESGLQFLHSGA-SVLQVCSA 830

Query: 348 LMDFMKLHNFSSIEDF 358
           + +     +F+ IED+
Sbjct: 832 IQN----QDFTVIEDY 830

[Close]

BLAST of Cp4.1LG09g10960 vs. NCBI nr
Match: XP_023542979.1 (dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 806 bits (2083), Expect = 3.87e-294
Identity = 410/424 (96.70%), Postives = 410/424 (96.70%), Query Frame = 0


Query: 1   MASLNFTQIRSRNPISDLTLTRSQTGLARRTRVGFKVVAASESPVEPDLSVTVNGLHMPN 60
           MASLNFTQIRSRNPISDLTLTRSQTGLARRTRVGFKVVAASESPVEPDLSVTVNGLHMPN
Sbjct: 1   MASLNFTQIRSRNPISDLTLTRSQTGLARRTRVGFKVVAASESPVEPDLSVTVNGLHMPN 60

Query: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120
           PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ
Sbjct: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120

Query: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180
           IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD
Sbjct: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180

Query: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPARV 240
           AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPARV
Sbjct: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPARV 240

Query: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300
           ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM
Sbjct: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300

Query: 301 MKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ--------------KLCAELMDFM 360
           MKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ              KLCAELMDFM
Sbjct: 301 MKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQVCTGVMMHGYGLVKKLCAELMDFM 360

Query: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 410
           KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES
Sbjct: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 420

[Close]

BLAST of Cp4.1LG09g10960 vs. NCBI nr
Match: KAG6572978.1 (Dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 798 bits (2061), Expect = 8.73e-291
Identity = 405/424 (95.52%), Postives = 407/424 (95.99%), Query Frame = 0


Query: 1   MASLNFTQIRSRNPISDLTLTRSQTGLARRTRVGFKVVAASESPVEPDLSVTVNGLHMPN 60
           MASLNFTQIR++NPISDLTLTRSQ GLARRTRVGFKVVAA ESPVEPDLSVTVNGLHMPN
Sbjct: 1   MASLNFTQIRNKNPISDLTLTRSQMGLARRTRVGFKVVAAGESPVEPDLSVTVNGLHMPN 60

Query: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120
           PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ
Sbjct: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120

Query: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180
           IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD
Sbjct: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180

Query: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPARV 240
           AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPARV
Sbjct: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPARV 240

Query: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300
           ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM
Sbjct: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300

Query: 301 MKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ--------------KLCAELMDFM 360
           MKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ              KLCAEL DFM
Sbjct: 301 MKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQVCTGVMMHGYGLVKKLCAELKDFM 360

Query: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 410
           KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES
Sbjct: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 420

[Close]

BLAST of Cp4.1LG09g10960 vs. NCBI nr
Match: XP_022955049.1 (dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 796 bits (2056), Expect = 5.05e-290
Identity = 404/424 (95.28%), Postives = 406/424 (95.75%), Query Frame = 0


Query: 1   MASLNFTQIRSRNPISDLTLTRSQTGLARRTRVGFKVVAASESPVEPDLSVTVNGLHMPN 60
           MASLNFTQIR++NPISDLTLTRSQTGLARRTRVGFKVVAA ESPVEPDLSVTVNGLHMPN
Sbjct: 1   MASLNFTQIRNKNPISDLTLTRSQTGLARRTRVGFKVVAAGESPVEPDLSVTVNGLHMPN 60

Query: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120
           PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGS KGQ
Sbjct: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSGKGQ 120

Query: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180
           IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD
Sbjct: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180

Query: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPARV 240
           AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPARV
Sbjct: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPARV 240

Query: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300
           ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM
Sbjct: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300

Query: 301 MKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ--------------KLCAELMDFM 360
           MKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ              KLCAEL D M
Sbjct: 301 MKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQVCTGVMMHGYGLVKKLCAELKDVM 360

Query: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 410
           KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES
Sbjct: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 420

[Close]

BLAST of Cp4.1LG09g10960 vs. NCBI nr
Match: XP_022994129.1 (dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 789 bits (2038), Expect = 2.90e-287
Identity = 403/425 (94.82%), Postives = 406/425 (95.53%), Query Frame = 0


Query: 1   MASLNFTQIRSRNPISDLTLTRSQT-GLARRTRVGFKVVAASESPVEPDLSVTVNGLHMP 60
           MASLNFTQIR++NPIS+LTLTRSQT GLARRTRVGFKVVAA ESPVEPDLSVTVNGLHMP
Sbjct: 1   MASLNFTQIRNKNPISELTLTRSQTTGLARRTRVGFKVVAAGESPVEPDLSVTVNGLHMP 60

Query: 61  NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKG 120
           NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKG
Sbjct: 61  NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKG 120

Query: 121 QIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGV 180
           QIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNK AWEELIDRVEQTGV
Sbjct: 121 QIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKDAWEELIDRVEQTGV 180

Query: 181 DAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPAR 240
           DAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPAR
Sbjct: 181 DAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPAR 240

Query: 241 VALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAK 300
           VALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAK
Sbjct: 241 VALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAK 300

Query: 301 MMKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ--------------KLCAELMDF 360
           MMKAEFNDA YSLSGIGGVETGGDAAEFILLGANSVQ              KLCAEL DF
Sbjct: 301 MMKAEFNDAGYSLSGIGGVETGGDAAEFILLGANSVQVCTGVMMHGYGLVKKLCAELKDF 360

Query: 361 MKLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETE 410
           MKLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETE
Sbjct: 361 MKLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETE 420

[Close]

BLAST of Cp4.1LG09g10960 vs. NCBI nr
Match: XP_023519817.1 (dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 771 bits (1992), Expect = 2.86e-280
Identity = 390/424 (91.98%), Postives = 399/424 (94.10%), Query Frame = 0


Query: 1   MASLNFTQIRSRNPISDLTLTRSQTGLARRTRVGFKVVAASESPVEPDLSVTVNGLHMPN 60
           MASL+FTQIR+RNP+S+L L RS+  L RR RVGF+VVAA E   EPDLSVTVNGLHMPN
Sbjct: 1   MASLDFTQIRTRNPMSELALNRSRMRLPRRNRVGFRVVAAGEGQAEPDLSVTVNGLHMPN 60

Query: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120
           PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ
Sbjct: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120

Query: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180
           IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD
Sbjct: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180

Query: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPARV 240
           AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDI+QPARV
Sbjct: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV 240

Query: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300
           ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVL+IAKM
Sbjct: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLNIAKM 300

Query: 301 MKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ--------------KLCAELMDFM 360
           MKAEFNDADYSLSGIGGVETGGDAAEFILLGAN+VQ              KLCAEL DFM
Sbjct: 301 MKAEFNDADYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCAELKDFM 360

Query: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 410
           KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES
Sbjct: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 420

[Close]

BLAST of Cp4.1LG09g10960 vs. ExPASy TrEMBL
Match: A0A6J1GUT8 (Dihydrothymine dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111457127 PE=3 SV=1)

HSP 1 Score: 796 bits (2056), Expect = 2.44e-290
Identity = 404/424 (95.28%), Postives = 406/424 (95.75%), Query Frame = 0


Query: 1   MASLNFTQIRSRNPISDLTLTRSQTGLARRTRVGFKVVAASESPVEPDLSVTVNGLHMPN 60
           MASLNFTQIR++NPISDLTLTRSQTGLARRTRVGFKVVAA ESPVEPDLSVTVNGLHMPN
Sbjct: 1   MASLNFTQIRNKNPISDLTLTRSQTGLARRTRVGFKVVAAGESPVEPDLSVTVNGLHMPN 60

Query: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120
           PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGS KGQ
Sbjct: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSGKGQ 120

Query: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180
           IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD
Sbjct: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180

Query: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPARV 240
           AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPARV
Sbjct: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPARV 240

Query: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300
           ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM
Sbjct: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300

Query: 301 MKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ--------------KLCAELMDFM 360
           MKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ              KLCAEL D M
Sbjct: 301 MKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQVCTGVMMHGYGLVKKLCAELKDVM 360

Query: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 410
           KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES
Sbjct: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 420

[Close]

BLAST of Cp4.1LG09g10960 vs. ExPASy TrEMBL
Match: A0A6J1K219 (Dihydrothymine dehydrogenase OS=Cucurbita maxima OX=3661 GN=LOC111489957 PE=3 SV=1)

HSP 1 Score: 789 bits (2038), Expect = 1.40e-287
Identity = 403/425 (94.82%), Postives = 406/425 (95.53%), Query Frame = 0


Query: 1   MASLNFTQIRSRNPISDLTLTRSQT-GLARRTRVGFKVVAASESPVEPDLSVTVNGLHMP 60
           MASLNFTQIR++NPIS+LTLTRSQT GLARRTRVGFKVVAA ESPVEPDLSVTVNGLHMP
Sbjct: 1   MASLNFTQIRNKNPISELTLTRSQTTGLARRTRVGFKVVAAGESPVEPDLSVTVNGLHMP 60

Query: 61  NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKG 120
           NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKG
Sbjct: 61  NPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKG 120

Query: 121 QIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGV 180
           QIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNK AWEELIDRVEQTGV
Sbjct: 121 QIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKDAWEELIDRVEQTGV 180

Query: 181 DAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPAR 240
           DAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPAR
Sbjct: 181 DAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPAR 240

Query: 241 VALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAK 300
           VALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAK
Sbjct: 241 VALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAK 300

Query: 301 MMKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ--------------KLCAELMDF 360
           MMKAEFNDA YSLSGIGGVETGGDAAEFILLGANSVQ              KLCAEL DF
Sbjct: 301 MMKAEFNDAGYSLSGIGGVETGGDAAEFILLGANSVQVCTGVMMHGYGLVKKLCAELKDF 360

Query: 361 MKLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETE 410
           MKLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETE
Sbjct: 361 MKLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETE 420

[Close]

BLAST of Cp4.1LG09g10960 vs. ExPASy TrEMBL
Match: A0A6J1E7E7 (Dihydrothymine dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111431318 PE=3 SV=1)

HSP 1 Score: 768 bits (1983), Expect = 3.26e-279
Identity = 388/424 (91.51%), Postives = 397/424 (93.63%), Query Frame = 0


Query: 1   MASLNFTQIRSRNPISDLTLTRSQTGLARRTRVGFKVVAASESPVEPDLSVTVNGLHMPN 60
           MASL+FTQIR+ NP+S+L L RS+  L RR RVGF+VVAA E   EPDLSVTVNGLHMPN
Sbjct: 1   MASLDFTQIRTTNPMSELALNRSRMRLTRRNRVGFRVVAAGEGQAEPDLSVTVNGLHMPN 60

Query: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120
           PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ
Sbjct: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120

Query: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180
           IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD
Sbjct: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180

Query: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPARV 240
           AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDI+QPARV
Sbjct: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV 240

Query: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300
           ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVL+IAKM
Sbjct: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLNIAKM 300

Query: 301 MKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ--------------KLCAELMDFM 360
           MKAEFND DYSLSGIGGVETGGDAAEFILLGAN+VQ              KLCAEL DFM
Sbjct: 301 MKAEFNDGDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCAELKDFM 360

Query: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 410
           KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES
Sbjct: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 420

[Close]

BLAST of Cp4.1LG09g10960 vs. ExPASy TrEMBL
Match: A0A6J1KNM9 (Dihydrothymine dehydrogenase OS=Cucurbita maxima OX=3661 GN=LOC111495821 PE=3 SV=1)

HSP 1 Score: 766 bits (1978), Expect = 1.88e-278
Identity = 387/424 (91.27%), Postives = 398/424 (93.87%), Query Frame = 0


Query: 1   MASLNFTQIRSRNPISDLTLTRSQTGLARRTRVGFKVVAASESPVEPDLSVTVNGLHMPN 60
           MASL+FTQIR+RNP+S+L L RS+  L RR RVGF+VVAA E   EPDLSVTVNGLHMPN
Sbjct: 1   MASLDFTQIRTRNPMSELALNRSRMRLTRRNRVGFRVVAAGEGQAEPDLSVTVNGLHMPN 60

Query: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120
           PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADS+GSAKGQ
Sbjct: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSSGSAKGQ 120

Query: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180
           IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD
Sbjct: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180

Query: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPARV 240
           AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDI+QPARV
Sbjct: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV 240

Query: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300
           ALK GCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVL+IAKM
Sbjct: 241 ALKLGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLNIAKM 300

Query: 301 MKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ--------------KLCAELMDFM 360
           MKAEFNDADYSLSGIGGVETGGDAAEFILLGAN+VQ              KLCAEL DFM
Sbjct: 301 MKAEFNDADYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCAELKDFM 360

Query: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 410
           KLHNFSSIE+FRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES
Sbjct: 361 KLHNFSSIEEFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 420

[Close]

BLAST of Cp4.1LG09g10960 vs. ExPASy TrEMBL
Match: A0A1S4DTL5 (Dihydrothymine dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103504066 PE=3 SV=1)

HSP 1 Score: 758 bits (1958), Expect = 2.10e-275
Identity = 383/424 (90.33%), Postives = 393/424 (92.69%), Query Frame = 0


Query: 1   MASLNFTQIRSRNPISDLTLTRSQTGLARRTRVGFKVVAASESPVEPDLSVTVNGLHMPN 60
           MAS N TQ R++NPI +L L  S+TGL R TR+GF+VVA+ E   EPDLSVTVNGL+MPN
Sbjct: 1   MASFNLTQFRTKNPIPNLALNPSRTGLTRPTRLGFRVVASGEPQAEPDLSVTVNGLNMPN 60

Query: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120
           PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ
Sbjct: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120

Query: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180
           IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD
Sbjct: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180

Query: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIAQPARV 240
           AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDI+QPARV
Sbjct: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV 240

Query: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300
           ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM
Sbjct: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300

Query: 301 MKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ--------------KLCAELMDFM 360
           MKAEFND DYSLSGIGGVE GGDAAEFILLGAN+VQ              KLCAEL DFM
Sbjct: 301 MKAEFNDGDYSLSGIGGVEAGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCAELQDFM 360

Query: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 410
           KLHNFSSIEDFRGASLPYFTTH DLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES
Sbjct: 361 KLHNFSSIEDFRGASLPYFTTHMDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 420

[Close]

BLAST of Cp4.1LG09g10960 vs. TAIR 10
Match: AT3G17810.1 (pyrimidine 1 )

HSP 1 Score: 658.7 bits (1698), Expect = 3.1e-189
Identity = 337/429 (78.55%), Postives = 370/429 (86.25%), Query Frame = 0


Query: 1   MASLNFTQIRSRNPISDLTLTRSQTGLARR-----TRVGFKVVAASESPVEPDLSVTVNG 60
           MAS++F   R     S  TL+      +RR     TRVG K+ +A+ES  EPDLSVTVNG
Sbjct: 1   MASMSFALNRFSGLSSKTTLSADFDPSSRRSFLPPTRVGLKISSAAES--EPDLSVTVNG 60

Query: 61  LHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNG 120
           L MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDA+KVINVTPRYARLR  SNG
Sbjct: 61  LKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDASKVINVTPRYARLRTGSNG 120

Query: 121 SAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVE 180
           SAK  +IGW+NIELISDRPLETMLKEF++LK+EYPDRILIAS+MEEYNK AWEELIDRVE
Sbjct: 121 SAKTDVIGWQNIELISDRPLETMLKEFERLKKEYPDRILIASVMEEYNKTAWEELIDRVE 180

Query: 181 QTGVDAFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDIA 240
           QTGVDA EINFSCPHGMPERRMGAAVGQDCALL+EVCGWINAKAT+PVWAKMTPNITDI 
Sbjct: 181 QTGVDALEINFSCPHGMPERRMGAAVGQDCALLDEVCGWINAKATVPVWAKMTPNITDIT 240

Query: 241 QPARVALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVL 300
           +PARV+LKSGCEGIAAINTIMSVMGID+KTLRPEPCVEGYSTPGGYS KAV PIAL KV+
Sbjct: 241 EPARVSLKSGCEGIAAINTIMSVMGIDMKTLRPEPCVEGYSTPGGYSYKAVRPIALAKVM 300

Query: 301 SIAKMMKAEFNDADYSLSGIGGVETGGDAAEFILLGANSVQ--------------KLCAE 360
           +IAKMMK+EF++ D SLSGIGGVETG DAAEFILLG+N+VQ               LCAE
Sbjct: 301 NIAKMMKSEFSE-DRSLSGIGGVETGYDAAEFILLGSNTVQVCTGVMMHGYGHVKTLCAE 360

Query: 361 LMDFMKLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFV 411
           L DFMK HNFS+IE+FRG SL YFTTHTDLV+RQ+EA+EQRKA K+GL+SDKDWTGDGFV
Sbjct: 361 LKDFMKQHNFSTIEEFRGHSLQYFTTHTDLVKRQKEAVEQRKAEKRGLKSDKDWTGDGFV 420

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g10960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVI9	4.4e-188	78.55	Dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic OS=Arabidopsis thaliana...	[more]
Q8X643	7.7e-60	44.64	NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS=Escherichia coli O...	[more]
P25889	7.7e-60	44.64	NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS=Escherichia coli (...	[more]
Q8ZNL7	1.5e-58	43.94	NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS=Salmonella typhimu...	[more]
Q8CHR6	5.2e-56	38.92	Dihydropyrimidine dehydrogenase [NADP(+)] OS=Mus musculus OX=10090 GN=Dpyd PE=1 ...	[more]

BLAST of Cp4.1LG09g10960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542979.1	3.87e-294	96.70	dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like [Cucurbita pepo su...	[more]
KAG6572978.1	8.73e-291	95.52	Dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic, partial [Cucurbita arg...	[more]
XP_022955049.1	5.05e-290	95.28	dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like [Cucurbita moschat...	[more]
XP_022994129.1	2.90e-287	94.82	dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like [Cucurbita maxima]	[more]
XP_023519817.1	2.86e-280	91.98	dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like [Cucurbita pepo su...	[more]

BLAST of Cp4.1LG09g10960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GUT8	2.44e-290	95.28	Dihydrothymine dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111457127 PE=3 ...	[more]
A0A6J1K219	1.40e-287	94.82	Dihydrothymine dehydrogenase OS=Cucurbita maxima OX=3661 GN=LOC111489957 PE=3 SV...	[more]
A0A6J1E7E7	3.26e-279	91.51	Dihydrothymine dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111431318 PE=3 ...	[more]
A0A6J1KNM9	1.88e-278	91.27	Dihydrothymine dehydrogenase OS=Cucurbita maxima OX=3661 GN=LOC111495821 PE=3 SV...	[more]
A0A1S4DTL5	2.10e-275	90.33	Dihydrothymine dehydrogenase OS=Cucumis melo OX=3656 GN=LOC103504066 PE=3 SV=1	[more]

BLAST of Cp4.1LG09g10960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17810.1	3.1e-189	78.55	pyrimidine 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005720	Dihydroorotate dehydrogenase domain	PFAM	PF01180	DHO_dh	coord: 49..337 e-value: 1.1E-26 score: 93.7
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 49..351 e-value: 1.8E-88 score: 298.9
None	No IPR available	PANTHER	PTHR43073:SF3	BNAA01G27800D PROTEIN	coord: 1..410
None	No IPR available	CDD	cd02940	DHPD_FMN	coord: 48..356 e-value: 2.38368E-167 score: 469.072
None	No IPR available	SUPERFAMILY	51395	FMN-linked oxidoreductases	coord: 46..362
IPR044512	Dihydropyrimidine dehydrogenase	PANTHER	PTHR43073	DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)]	coord: 1..410

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g10960.1	Cp4.1LG09g10960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019483	beta-alanine biosynthetic process
biological_process	GO:0006210	thymine catabolic process
biological_process	GO:0006212	uracil catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0017113	dihydropyrimidine dehydrogenase (NADP+) activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0050661	NADP binding
molecular_function	GO:0002058	uracil binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors