Cp4.1LG09g10680 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g10680
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	glucuronoxylan 4-O-methyltransferase 1-like
Location	Cp4.1LG09: 9318104 .. 9318700 (+)
RNA-Seq Expression	Cp4.1LG09g10680
Synteny	Cp4.1LG09g10680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGCAGCCTCGGTCCTCGCCGTTCGGTCACCGTGCAACTTCCTCGTCTTTGGTCTCGGTCACGATAGCCTCATGTGGGCTACGTTAAACCATGGTGGCCGGACGTTATTCCTCGAAGAAGACGAATCATGGATTCAACAAATACATCGTCGTTTTCCAATGTTGGAATCTCGACATGCTTGCTATGATAGCAAGGTTCAACAGGCTGATAGTTTGATGGATGTCGGAAAAGGATTGGAGTGTAGGGTGGTTGGTGACCCGAAATACTCAGTGTGTCAACTAGCACAAAAGGGTCTCCCGGAAGAAGTGTATGACGTGAAGTGGGATTTGATTATGGTGGATGCACCGACTGGGTACTATGACGATGCGCCGGGGAGGATGACGGCGATCTATACGGCGGGGATGATGGCGAGGAATAGGGAAGAAGGGGGAATTACAGATGTATTTGTGCATGATGTGAATAGGGAAGTGGAAGATAAGTTTTCAATGGAGTTTTTGTGCGAAGGTTATATGGTGAAACAAGAAGGAAGATTGAGGCATTTTAGAATTCCTTCTCATAGAAATGAATTAGATAAACCCTTCTGTCCATTTTAA

mRNA sequence

ATGGTGGCAGCCTCGGTCCTCGCCGTTCGGTCACCGTGCAACTTCCTCGTCTTTGGTCTCGGTCACGATAGCCTCATGTGGGCTACGTTAAACCATGGTGGCCGGACGTTATTCCTCGAAGAAGACGAATCATGGATTCAACAAATACATCGTCGTTTTCCAATGTTGGAATCTCGACATGCTTGCTATGATAGCAAGGTTCAACAGGCTGATAGTTTGATGGATGTCGGAAAAGGATTGGAGTGTAGGGTGGTTGGTGACCCGAAATACTCAGTGTGTCAACTAGCACAAAAGGGTCTCCCGGAAGAAGTGTATGACGTGAAGTGGGATTTGATTATGGTGGATGCACCGACTGGGTACTATGACGATGCGCCGGGGAGGATGACGGCGATCTATACGGCGGGGATGATGGCGAGGAATAGGGAAGAAGGGGGAATTACAGATGTATTTGTGCATGATGTGAATAGGGAAGTGGAAGATAAGTTTTCAATGGAGTTTTTGTGCGAAGGTTATATGGTGAAACAAGAAGGAAGATTGAGGCATTTTAGAATTCCTTCTCATAGAAATGAATTAGATAAACCCTTCTGTCCATTTTAA

Coding sequence (CDS)

ATGGTGGCAGCCTCGGTCCTCGCCGTTCGGTCACCGTGCAACTTCCTCGTCTTTGGTCTCGGTCACGATAGCCTCATGTGGGCTACGTTAAACCATGGTGGCCGGACGTTATTCCTCGAAGAAGACGAATCATGGATTCAACAAATACATCGTCGTTTTCCAATGTTGGAATCTCGACATGCTTGCTATGATAGCAAGGTTCAACAGGCTGATAGTTTGATGGATGTCGGAAAAGGATTGGAGTGTAGGGTGGTTGGTGACCCGAAATACTCAGTGTGTCAACTAGCACAAAAGGGTCTCCCGGAAGAAGTGTATGACGTGAAGTGGGATTTGATTATGGTGGATGCACCGACTGGGTACTATGACGATGCGCCGGGGAGGATGACGGCGATCTATACGGCGGGGATGATGGCGAGGAATAGGGAAGAAGGGGGAATTACAGATGTATTTGTGCATGATGTGAATAGGGAAGTGGAAGATAAGTTTTCAATGGAGTTTTTGTGCGAAGGTTATATGGTGAAACAAGAAGGAAGATTGAGGCATTTTAGAATTCCTTCTCATAGAAATGAATTAGATAAACCCTTCTGTCCATTTTAA

Protein sequence

MVAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHACYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYYDDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRHFRIPSHRNELDKPFCPF

Homology

[Close]

BLAST of Cp4.1LG09g10680 vs. ExPASy Swiss-Prot
Match: Q6NMK1 (Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=GXM1 PE=1 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 1.9e-88
Identity = 150/200 (75.00%), Postives = 175/200 (87.50%), Query Frame = 0


Query: 2   VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 61
           V++ VL  +SPCNFLVFGLGHDSLMW++LN+GGRT+FLEEDE+WI+QI RRFPMLES H 
Sbjct: 83  VSSRVLGKKSPCNFLVFGLGHDSLMWSSLNYGGRTVFLEEDEAWIKQIKRRFPMLESYHV 142

Query: 62  CYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY 121
            YDSKV QAD+L++VGKG EC  +GDP+YS+CQLA KGLP E+Y+  WDLIMVDAPTGYY
Sbjct: 143 TYDSKVNQADNLIEVGKGPECTAIGDPRYSMCQLALKGLPAEIYETGWDLIMVDAPTGYY 202

Query: 122 DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 181
           D+APGRMTAIYTAGMMARNR++GG TDVFVHDVNRE+EDKFS  FLCEGYM KQEGRLRH
Sbjct: 203 DEAPGRMTAIYTAGMMARNRKQGGETDVFVHDVNREIEDKFSKAFLCEGYMKKQEGRLRH 262

Query: 182 FRIPSHR----NELDKPFCP 198
           F IPS+R    +E ++PFCP
Sbjct: 263 FIIPSYRDGSESESNRPFCP 282

[Close]

BLAST of Cp4.1LG09g10680 vs. ExPASy Swiss-Prot
Match: Q9T0F7 (Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=GXM2 PE=1 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 3.7e-76
Identity = 126/196 (64.29%), Postives = 160/196 (81.63%), Query Frame = 0


Query: 2   VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 61
           V+  VL  +SPCNFLVFGLGHDSLMWA+LNHGGRTLFLEEDE+WI+ + ++FP LES H 
Sbjct: 88  VSKRVLDKKSPCNFLVFGLGHDSLMWASLNHGGRTLFLEEDEAWIETVTKKFPNLESYHV 147

Query: 62  CYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY 121
            YD+KV+ ++ LM++ +  +C+ V DP+ S C L+ KG P +VY+ +WD+IMVDAPTGY+
Sbjct: 148 VYDTKVKDSNKLMELKRTEDCKAVSDPRDSKCALSLKGFPADVYETQWDVIMVDAPTGYH 207

Query: 122 DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 181
           D+APGRM+AIYTAG++ARNR +GG TDVFVHD+NR VED+FS+ FLC GYM +Q+GRLRH
Sbjct: 208 DEAPGRMSAIYTAGLLARNRYDGGETDVFVHDINRPVEDEFSVAFLCGGYMKEQQGRLRH 267

Query: 182 FRIPSHRNELDKPFCP 198
           F IPSHR     PFCP
Sbjct: 268 FNIPSHRASFGTPFCP 283

[Close]

BLAST of Cp4.1LG09g10680 vs. ExPASy Swiss-Prot
Match: Q9LQ32 (Glucuronoxylan 4-O-methyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=GXM3 PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.4e-75
Identity = 129/196 (65.82%), Postives = 158/196 (80.61%), Query Frame = 0


Query: 2   VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 61
           V+  VL  +SPCNFLVFGLGHDSLMWA+LNHGGRTLF+EED++WI  + ++FP LES H 
Sbjct: 96  VSKRVLDKKSPCNFLVFGLGHDSLMWASLNHGGRTLFIEEDQAWIAIVTKKFPNLESYHV 155

Query: 62  CYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY 121
            YD+KV+ +D LM++G+  ECR V DP+ S C LA K  P + Y+ KWDLIMVDAPTGY+
Sbjct: 156 VYDTKVKDSDKLMELGRSEECRSVSDPRNSKCDLALKDFPADFYETKWDLIMVDAPTGYH 215

Query: 122 DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 181
           ++APGRM+AIYTAG++ARNRE+G  TDVFVHDVNR VED+FS  FLC+GYM +Q GRLRH
Sbjct: 216 EEAPGRMSAIYTAGLLARNREDGE-TDVFVHDVNRPVEDEFSATFLCKGYMREQNGRLRH 275

Query: 182 FRIPSHRNELDKPFCP 198
           F IPSHR    +PFCP
Sbjct: 276 FTIPSHRARAGRPFCP 290

[Close]

BLAST of Cp4.1LG09g10680 vs. ExPASy Swiss-Prot
Match: Q9C7F9 (Probable methyltransferase At1g27930 OS=Arabidopsis thaliana OX=3702 GN=At1g27930 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.0e-49
Identity = 98/188 (52.13%), Postives = 128/188 (68.09%), Query Frame = 0


Query: 2   VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 61
           ++ ++L   +P NFLVFGLG DSLMWA+LN  G+TLFLEED  W Q++ +  P L + H 
Sbjct: 87  ISFNILKKLAPANFLVFGLGRDSLMWASLNPRGKTLFLEEDLEWFQKVTKDSPFLRAHHV 146

Query: 62  CYDSKVQQADSLMDVGKGLECRVVGDPKY----SVCQLAQKGLPEEVYDVKWDLIMVDAP 121
            Y +++QQADSL+   K  E +      Y      C+LA  GLP+E YD +WDL+MVDAP
Sbjct: 147 RYRTQLQQADSLLRSYK-TEPKCFPAKSYLRGNEKCKLALTGLPDEFYDTEWDLLMVDAP 206

Query: 122 TGYYDDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEG 181
            GY+ +APGRM AI++A +MARNR++ G+T VF+HDVNR VE  F+ EFLC  Y V   G
Sbjct: 207 KGYFAEAPGRMAAIFSAAVMARNRKKPGVTHVFLHDVNRRVEKTFAEEFLCRKYRVNAAG 266

Query: 182 RLRHFRIP 186
           RL HF IP
Sbjct: 267 RLWHFAIP 273

[Close]

BLAST of Cp4.1LG09g10680 vs. ExPASy Swiss-Prot
Match: Q9FH92 (Protein IRX15-LIKE OS=Arabidopsis thaliana OX=3702 GN=IRX15-L PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-33
Identity = 74/175 (42.29%), Postives = 104/175 (59.43%), Query Frame = 0


Query: 12  PCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHACYDSKVQQAD 71
           PCN LVFGL H++L+W +LNH GRT+F+EE+  +        P +E     Y +K ++A 
Sbjct: 116 PCNLLVFGLTHETLLWKSLNHNGRTVFIEENRYYAAYFEEIHPEIEVFDVQYTTKAREAR 175

Query: 72  SLMDVGKGL---ECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYYDDAPGRM 131
            L+   K     ECR V +  +S C+L    LP  VYDV WD+I+VD P G   D PGRM
Sbjct: 176 ELVSAVKEAARNECRPVQNLLFSDCKLGLNDLPNHVYDVDWDVILVDGPRGDGGDVPGRM 235

Query: 132 TAIYTAGMMARNREEGG-ITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRHF 183
           ++I+TA ++AR+++ G   T VFVHD  R+VE     EFLC   +V+    L H+
Sbjct: 236 SSIFTAAVLARSKKGGNPKTHVFVHDYYRDVERLCGDEFLCRENLVESNDLLAHY 290

[Close]

BLAST of Cp4.1LG09g10680 vs. NCBI nr
Match: XP_023542198.1 (glucuronoxylan 4-O-methyltransferase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 419 bits (1077), Expect = 9.10e-147
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MVAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRH 60
           MVAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRH
Sbjct: 90  MVAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRH 149

Query: 61  ACYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGY 120
           ACYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGY
Sbjct: 150 ACYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGY 209

Query: 121 YDDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLR 180
           YDDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLR
Sbjct: 210 YDDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLR 269

Query: 181 HFRIPSHRNELDKPFCPF 198
           HFRIPSHRNELDKPFCPF
Sbjct: 270 HFRIPSHRNELDKPFCPF 287

[Close]

BLAST of Cp4.1LG09g10680 vs. NCBI nr
Match: KAG7012196.1 (Glucuronoxylan 4-O-methyltransferase 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 414 bits (1063), Expect = 4.24e-145
Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 2   VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 61
           VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA
Sbjct: 61  VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 120

Query: 62  CYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY 121
           CYDSKVQQADSLMDVGKGLECR VGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY
Sbjct: 121 CYDSKVQQADSLMDVGKGLECRAVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY 180

Query: 122 DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 181
           DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH
Sbjct: 181 DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 240

Query: 182 FRIPSHRNELDKPFCPF 198
           FRIPSHR+ELDKPFCPF
Sbjct: 241 FRIPSHRDELDKPFCPF 257

[Close]

BLAST of Cp4.1LG09g10680 vs. NCBI nr
Match: XP_022994652.1 (glucuronoxylan 4-O-methyltransferase 1-like [Cucurbita maxima])

HSP 1 Score: 414 bits (1065), Expect = 6.13e-145
Identity = 195/198 (98.48%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MVAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRH 60
           MVAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRH
Sbjct: 90  MVAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRH 149

Query: 61  ACYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGY 120
           ACYDSKVQQADSLMDVGKGLECR VGDPKYSVCQLAQKGLPEEVYD+KWDLIMVDAPTGY
Sbjct: 150 ACYDSKVQQADSLMDVGKGLECRAVGDPKYSVCQLAQKGLPEEVYDMKWDLIMVDAPTGY 209

Query: 121 YDDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLR 180
           YDDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLR
Sbjct: 210 YDDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLR 269

Query: 181 HFRIPSHRNELDKPFCPF 198
           HFRIPSHR+ELDKPFCPF
Sbjct: 270 HFRIPSHRDELDKPFCPF 287

[Close]

BLAST of Cp4.1LG09g10680 vs. NCBI nr
Match: XP_022954973.1 (glucuronoxylan 4-O-methyltransferase 1-like [Cucurbita moschata])

HSP 1 Score: 414 bits (1063), Expect = 1.24e-144
Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 2   VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 61
           VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA
Sbjct: 91  VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 150

Query: 62  CYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY 121
           CYDSKVQQADSLMDVGKGLECR VGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY
Sbjct: 151 CYDSKVQQADSLMDVGKGLECRAVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY 210

Query: 122 DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 181
           DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH
Sbjct: 211 DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 270

Query: 182 FRIPSHRNELDKPFCPF 198
           FRIPSHR+ELDKPFCPF
Sbjct: 271 FRIPSHRDELDKPFCPF 287

[Close]

BLAST of Cp4.1LG09g10680 vs. NCBI nr
Match: KAG6573011.1 (Glucuronoxylan 4-O-methyltransferase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 411 bits (1057), Expect = 3.48e-144
Identity = 194/197 (98.48%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 2   VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 61
           VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA
Sbjct: 61  VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 120

Query: 62  CYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY 121
           CYDSKVQQADSLMDVGKGLECR VGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY
Sbjct: 121 CYDSKVQQADSLMDVGKGLECRAVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY 180

Query: 122 DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 181
           DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVED FSMEFLCEGYMVKQEGRLRH
Sbjct: 181 DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDTFSMEFLCEGYMVKQEGRLRH 240

Query: 182 FRIPSHRNELDKPFCPF 198
           FRIPSHR+ELDKPFCPF
Sbjct: 241 FRIPSHRDELDKPFCPF 257

[Close]

BLAST of Cp4.1LG09g10680 vs. ExPASy TrEMBL
Match: A0A6J1JWG6 (glucuronoxylan 4-O-methyltransferase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111490300 PE=4 SV=1)

HSP 1 Score: 414 bits (1065), Expect = 2.97e-145
Identity = 195/198 (98.48%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MVAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRH 60
           MVAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRH
Sbjct: 90  MVAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRH 149

Query: 61  ACYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGY 120
           ACYDSKVQQADSLMDVGKGLECR VGDPKYSVCQLAQKGLPEEVYD+KWDLIMVDAPTGY
Sbjct: 150 ACYDSKVQQADSLMDVGKGLECRAVGDPKYSVCQLAQKGLPEEVYDMKWDLIMVDAPTGY 209

Query: 121 YDDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLR 180
           YDDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLR
Sbjct: 210 YDDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLR 269

Query: 181 HFRIPSHRNELDKPFCPF 198
           HFRIPSHR+ELDKPFCPF
Sbjct: 270 HFRIPSHRDELDKPFCPF 287

[Close]

BLAST of Cp4.1LG09g10680 vs. ExPASy TrEMBL
Match: A0A6J1GSM4 (glucuronoxylan 4-O-methyltransferase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111457072 PE=4 SV=1)

HSP 1 Score: 414 bits (1063), Expect = 5.99e-145
Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 0


Query: 2   VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 61
           VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA
Sbjct: 91  VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 150

Query: 62  CYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY 121
           CYDSKVQQADSLMDVGKGLECR VGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY
Sbjct: 151 CYDSKVQQADSLMDVGKGLECRAVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY 210

Query: 122 DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 181
           DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH
Sbjct: 211 DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 270

Query: 182 FRIPSHRNELDKPFCPF 198
           FRIPSHR+ELDKPFCPF
Sbjct: 271 FRIPSHRDELDKPFCPF 287

[Close]

BLAST of Cp4.1LG09g10680 vs. ExPASy TrEMBL
Match: A0A1S3ATM9 (glucuronoxylan 4-O-methyltransferase 1 OS=Cucumis melo OX=3656 GN=LOC103482841 PE=4 SV=1)

HSP 1 Score: 371 bits (953), Expect = 3.51e-128
Identity = 175/197 (88.83%), Postives = 183/197 (92.89%), Query Frame = 0


Query: 2   VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 61
           VAA+VL  RSPCNFLVFGLGHDSLMWATLNHGGRTLFLEED+SWIQQI RRFPMLESRH 
Sbjct: 92  VAAAVLLDRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDKSWIQQISRRFPMLESRHV 151

Query: 62  CYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY 121
            YDSKV QAD LMDVGKG EC  VGDPKYSVC LA KGLPEEVY+VKWDLIMVDAPTG++
Sbjct: 152 IYDSKVHQADGLMDVGKGPECTAVGDPKYSVCPLAIKGLPEEVYEVKWDLIMVDAPTGFH 211

Query: 122 DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 181
           D+APGRMTAIYTAGMMARNREEGG TDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH
Sbjct: 212 DEAPGRMTAIYTAGMMARNREEGGSTDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 271

Query: 182 FRIPSHRNELDKPFCPF 198
           F IPSHR++LDKPFCPF
Sbjct: 272 FTIPSHRDDLDKPFCPF 288

[Close]

BLAST of Cp4.1LG09g10680 vs. ExPASy TrEMBL
Match: A0A0A0LTA4 (Polysacc_synt_4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G044930 PE=4 SV=1)

HSP 1 Score: 370 bits (950), Expect = 1.04e-127
Identity = 174/197 (88.32%), Postives = 183/197 (92.89%), Query Frame = 0


Query: 2   VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 61
           VAA+VL  RSPCNFLVFGLGHDSLMWATLNHGGRTLFLEED+SWIQQI RRFPMLESRH 
Sbjct: 93  VAAAVLLNRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDKSWIQQISRRFPMLESRHV 152

Query: 62  CYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY 121
            YDSKV QAD LMDVGKG EC  VGDPKYSVC LA KGLPEEVY+VKWDLIMVDAPTG++
Sbjct: 153 IYDSKVHQADGLMDVGKGPECTAVGDPKYSVCPLAIKGLPEEVYEVKWDLIMVDAPTGFH 212

Query: 122 DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 181
           D+APGRMTAIYTAGMMARNREEGG TDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH
Sbjct: 213 DEAPGRMTAIYTAGMMARNREEGGSTDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 272

Query: 182 FRIPSHRNELDKPFCPF 198
           F IPSH+++LDKPFCPF
Sbjct: 273 FTIPSHKDDLDKPFCPF 289

[Close]

BLAST of Cp4.1LG09g10680 vs. ExPASy TrEMBL
Match: A0A6J1C6R8 (glucuronoxylan 4-O-methyltransferase 1-like OS=Momordica charantia OX=3673 GN=LOC111008917 PE=4 SV=1)

HSP 1 Score: 360 bits (924), Expect = 1.01e-123
Identity = 168/197 (85.28%), Postives = 177/197 (89.85%), Query Frame = 0


Query: 2   VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 61
           V A VL  RSPCNFLVFGLGHDSLMWATLNHGGRT+FLEED+SWIQQI RRFPMLES H 
Sbjct: 95  VTAGVLDERSPCNFLVFGLGHDSLMWATLNHGGRTVFLEEDDSWIQQIRRRFPMLESYHV 154

Query: 62  CYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY 121
            YD+KV QAD LMDVGKG EC  VGDPKYS+CQLA KGLPEEVY+VKWDLIMVDAPTGYY
Sbjct: 155 TYDTKVNQADILMDVGKGPECTAVGDPKYSMCQLALKGLPEEVYEVKWDLIMVDAPTGYY 214

Query: 122 DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 181
           DDAPGRM AIYTAGMMARNREEGGITDVFVHDVNREVED+FS EFLC GYM  QEGRLRH
Sbjct: 215 DDAPGRMAAIYTAGMMARNREEGGITDVFVHDVNREVEDRFSKEFLCRGYMKNQEGRLRH 274

Query: 182 FRIPSHRNELDKPFCPF 198
           FRIPSHR+++D PFCPF
Sbjct: 275 FRIPSHRDDMDIPFCPF 291

[Close]

BLAST of Cp4.1LG09g10680 vs. TAIR 10
Match: AT1G09610.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 326.6 bits (836), Expect = 1.4e-89
Identity = 150/200 (75.00%), Postives = 175/200 (87.50%), Query Frame = 0


Query: 2   VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 61
           V++ VL  +SPCNFLVFGLGHDSLMW++LN+GGRT+FLEEDE+WI+QI RRFPMLES H 
Sbjct: 83  VSSRVLGKKSPCNFLVFGLGHDSLMWSSLNYGGRTVFLEEDEAWIKQIKRRFPMLESYHV 142

Query: 62  CYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY 121
            YDSKV QAD+L++VGKG EC  +GDP+YS+CQLA KGLP E+Y+  WDLIMVDAPTGYY
Sbjct: 143 TYDSKVNQADNLIEVGKGPECTAIGDPRYSMCQLALKGLPAEIYETGWDLIMVDAPTGYY 202

Query: 122 DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 181
           D+APGRMTAIYTAGMMARNR++GG TDVFVHDVNRE+EDKFS  FLCEGYM KQEGRLRH
Sbjct: 203 DEAPGRMTAIYTAGMMARNRKQGGETDVFVHDVNREIEDKFSKAFLCEGYMKKQEGRLRH 262

Query: 182 FRIPSHR----NELDKPFCP 198
           F IPS+R    +E ++PFCP
Sbjct: 263 FIIPSYRDGSESESNRPFCP 282

[Close]

BLAST of Cp4.1LG09g10680 vs. TAIR 10
Match: AT4G09990.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 285.8 bits (730), Expect = 2.6e-77
Identity = 126/196 (64.29%), Postives = 160/196 (81.63%), Query Frame = 0


Query: 2   VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 61
           V+  VL  +SPCNFLVFGLGHDSLMWA+LNHGGRTLFLEEDE+WI+ + ++FP LES H 
Sbjct: 88  VSKRVLDKKSPCNFLVFGLGHDSLMWASLNHGGRTLFLEEDEAWIETVTKKFPNLESYHV 147

Query: 62  CYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY 121
            YD+KV+ ++ LM++ +  +C+ V DP+ S C L+ KG P +VY+ +WD+IMVDAPTGY+
Sbjct: 148 VYDTKVKDSNKLMELKRTEDCKAVSDPRDSKCALSLKGFPADVYETQWDVIMVDAPTGYH 207

Query: 122 DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 181
           D+APGRM+AIYTAG++ARNR +GG TDVFVHD+NR VED+FS+ FLC GYM +Q+GRLRH
Sbjct: 208 DEAPGRMSAIYTAGLLARNRYDGGETDVFVHDINRPVEDEFSVAFLCGGYMKEQQGRLRH 267

Query: 182 FRIPSHRNELDKPFCP 198
           F IPSHR     PFCP
Sbjct: 268 FNIPSHRASFGTPFCP 283

[Close]

BLAST of Cp4.1LG09g10680 vs. TAIR 10
Match: AT1G33800.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 283.9 bits (725), Expect = 1.0e-76
Identity = 129/196 (65.82%), Postives = 158/196 (80.61%), Query Frame = 0


Query: 2   VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 61
           V+  VL  +SPCNFLVFGLGHDSLMWA+LNHGGRTLF+EED++WI  + ++FP LES H 
Sbjct: 96  VSKRVLDKKSPCNFLVFGLGHDSLMWASLNHGGRTLFIEEDQAWIAIVTKKFPNLESYHV 155

Query: 62  CYDSKVQQADSLMDVGKGLECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTGYY 121
            YD+KV+ +D LM++G+  ECR V DP+ S C LA K  P + Y+ KWDLIMVDAPTGY+
Sbjct: 156 VYDTKVKDSDKLMELGRSEECRSVSDPRNSKCDLALKDFPADFYETKWDLIMVDAPTGYH 215

Query: 122 DDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGRLRH 181
           ++APGRM+AIYTAG++ARNRE+G  TDVFVHDVNR VED+FS  FLC+GYM +Q GRLRH
Sbjct: 216 EEAPGRMSAIYTAGLLARNREDGE-TDVFVHDVNRPVEDEFSATFLCKGYMREQNGRLRH 275

Query: 182 FRIPSHRNELDKPFCP 198
           F IPSHR    +PFCP
Sbjct: 276 FTIPSHRARAGRPFCP 290

[Close]

BLAST of Cp4.1LG09g10680 vs. TAIR 10
Match: AT1G71690.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 261.9 bits (668), Expect = 4.1e-70
Identity = 131/201 (65.17%), Postives = 154/201 (76.62%), Query Frame = 0


Query: 2   VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 61
           V    L  +SPCNFLVFGLGHDSLMWATLNHGGRT+FL+EDESWI QI  +FP LES H 
Sbjct: 95  VTKKELEKKSPCNFLVFGLGHDSLMWATLNHGGRTIFLDEDESWIHQIAEKFPSLESYHV 154

Query: 62  CYDSKVQQADSLMDVGKGL-ECRVVG-DPKYSVCQLAQKGLPEEVYDVKWDLIMVDAPTG 121
            Y +KV+ A++LM   K   ECR V  D + S C+LA KGLPE VY+ +WDLIMVDAPTG
Sbjct: 155 RYKTKVRDAEALMAATKDREECRRVSTDLRVSTCELALKGLPEVVYETEWDLIMVDAPTG 214

Query: 122 YYDDAPGRMTAIYTAGMMARNR-EEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEGR 181
           ++++APGRM+AIYTAGM+AR R +E   T VFVHDV+R+VED+FSMEFLC  YM KQEGR
Sbjct: 215 FHEEAPGRMSAIYTAGMIARRRKDEEETTAVFVHDVDRKVEDEFSMEFLCRDYMTKQEGR 274

Query: 182 LRHFRIPSHRN--ELDKPFCP 198
           LRHF +PSHRN       FCP
Sbjct: 275 LRHFTVPSHRNYGVSGVKFCP 295

[Close]

BLAST of Cp4.1LG09g10680 vs. TAIR 10
Match: AT1G67330.1 (Protein of unknown function (DUF579) )

HSP 1 Score: 203.0 bits (515), Expect = 2.3e-52
Identity = 101/202 (50.00%), Postives = 130/202 (64.36%), Query Frame = 0


Query: 2   VAASVLAVRSPCNFLVFGLGHDSLMWATLNHGGRTLFLEEDESWIQQIHRRFPMLESRHA 61
           ++ +VL  R PCNFLVFGLG DSLMWA+LN GG T+FLEED  WI+ + +  P L + H 
Sbjct: 90  ISLNVLKERLPCNFLVFGLGRDSLMWASLNPGGTTVFLEEDPEWIEAVLKDAPSLRAHHV 149

Query: 62  CYDSKVQQADSLMDVGKG----LECRVVGDPKYSVCQLAQKGLPEEVYDVKWDLIMVDAP 121
            Y + + +A  L+   K     L  +         C LA   LP+E YD +WDLIMVDAP
Sbjct: 150 QYRTHLSEAGRLLSTYKNEPMCLPAKAFPIRYNEKCPLALTSLPDEFYDTEWDLIMVDAP 209

Query: 122 TGYYDDAPGRMTAIYTAGMMARNREEGGITDVFVHDVNREVEDKFSMEFLCEGYMVKQEG 181
            GY+ +APGRM AI+++ +MARNR+  G T VF+HDVNR+VE+ F+ EFLCE Y V   G
Sbjct: 210 KGYFPEAPGRMAAIFSSAIMARNRKGDGTTHVFLHDVNRKVENAFANEFLCEKYKVNSVG 269

Query: 182 RLRHFRIPSHRNELDKP---FC 197
           RL HF IP+  N  D+P   FC
Sbjct: 270 RLWHFEIPNAANMTDQPGDRFC 291

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g10680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NMK1	1.9e-88	75.00	Glucuronoxylan 4-O-methyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=GXM1 P...	[more]
Q9T0F7	3.7e-76	64.29	Glucuronoxylan 4-O-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=GXM2 P...	[more]
Q9LQ32	1.4e-75	65.82	Glucuronoxylan 4-O-methyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=GXM3 P...	[more]
Q9C7F9	1.0e-49	52.13	Probable methyltransferase At1g27930 OS=Arabidopsis thaliana OX=3702 GN=At1g2793...	[more]
Q9FH92	1.7e-33	42.29	Protein IRX15-LIKE OS=Arabidopsis thaliana OX=3702 GN=IRX15-L PE=2 SV=1	[more]

BLAST of Cp4.1LG09g10680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542198.1	9.10e-147	100.00	glucuronoxylan 4-O-methyltransferase 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG7012196.1	4.24e-145	98.98	Glucuronoxylan 4-O-methyltransferase 1, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_022994652.1	6.13e-145	98.48	glucuronoxylan 4-O-methyltransferase 1-like [Cucurbita maxima]	[more]
XP_022954973.1	1.24e-144	98.98	glucuronoxylan 4-O-methyltransferase 1-like [Cucurbita moschata]	[more]
KAG6573011.1	3.48e-144	98.48	Glucuronoxylan 4-O-methyltransferase 1, partial [Cucurbita argyrosperma subsp. s...	[more]

BLAST of Cp4.1LG09g10680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JWG6	2.97e-145	98.48	glucuronoxylan 4-O-methyltransferase 1-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1GSM4	5.99e-145	98.98	glucuronoxylan 4-O-methyltransferase 1-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A1S3ATM9	3.51e-128	88.83	glucuronoxylan 4-O-methyltransferase 1 OS=Cucumis melo OX=3656 GN=LOC103482841 P...	[more]
A0A0A0LTA4	1.04e-127	88.32	Polysacc_synt_4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G04...	[more]
A0A6J1C6R8	1.01e-123	85.28	glucuronoxylan 4-O-methyltransferase 1-like OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of Cp4.1LG09g10680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09610.1	1.4e-89	75.00	Protein of unknown function (DUF579)	[more]
AT4G09990.1	2.6e-77	64.29	Protein of unknown function (DUF579)	[more]
AT1G33800.1	1.0e-76	65.82	Protein of unknown function (DUF579)	[more]
AT1G71690.1	4.1e-70	65.17	Protein of unknown function (DUF579)	[more]
AT1G67330.1	2.3e-52	50.00	Protein of unknown function (DUF579)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021148	Polysaccharide biosynthesis domain	PFAM	PF04669	Polysacc_synt_4	coord: 2..182 e-value: 5.8E-67 score: 224.9
IPR006514	IRX15/IRX15L/IGXM	TIGRFAM	TIGR01627	TIGR01627	coord: 4..196 e-value: 9.8E-79 score: 262.2
IPR006514	IRX15/IRX15L/IGXM	PANTHER	PTHR31444	OS11G0490100 PROTEIN	coord: 2..197
None	No IPR available	PANTHER	PTHR31444:SF26	GLUCURONOXYLAN 4-O-METHYLTRANSFERASE 2-RELATED	coord: 2..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g10680.1	Cp4.1LG09g10680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0009834	plant-type secondary cell wall biogenesis
biological_process	GO:0045492	xylan biosynthetic process
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0030775	glucuronoxylan 4-O-methyltransferase activity