Cp4.1LG09g10330 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG09g10330
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionprotein DELETION OF SUV3 SUPPRESSOR 1(I)-like
LocationCp4.1LG09: 9091238 .. 9095512 (-)
RNA-Seq ExpressionCp4.1LG09g10330
SyntenyCp4.1LG09g10330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAATAAAGCAAATGGAAATAGCTGGATTCGAACAGAAGAACGCGACGCAGATTGGGTTACGACCTGATAGTTAGGGCTAAATATCCATCTGCTCGATCAGCAGATTTCTTCAGCTGGTTCAGTTTTTTTACACTCTCTCGAGACTTCCACTAGCATTCTGTCTTGCGTCCACCTCCTAGTAGAACGAAGGTAATGATCTTTACTGTTCATCTTTAAAATCTACATTCTTTCAATTTTACGATTTTTTTTGTTTAGATCTAGAATTTTCTCTGGAGTTCTTGGGTAATTTCATTCGCAGTAGCATATTTCAGTTCGGATGTACTGATTCGATGTGTTTTGCTATTTCCATCTCTTTATCCCACTTATGAACGAAGAAGTTTTCGATTTTTCATGATTTTTGTTGATCTTTGATGATATCGATACATGTTCTTGTGAGATTCTGCAAAATACGTTATCAATAAGACCTTCATTAGTATTTTTTTTTTCTTTTTGGTATTCTTGGTTCCTTGTGTGATTCGCATCTTACATTAGAAAAAATTAGGTTCAGTAGGTTTCACTTTGTTATTTTAATGCAAGTTCTTCATTTCGTCTGATTTATTAATCTTTTTTTTAATGATTAATGGGATTTATTGCTGATTTTTGTTGAATTCTACATCCTTATACAGTTCAAACTTTGTGATGGCGACTGAATCCAAAACCGCTACTGAGGAAGTTAAGATTGATCTCTTTGAAGATGATGATGAGTTTGAAGAGTTTGAGATTAATGAAGGTTCGATTTATGATCTTTCTACTTTCTTTCTTAATTCCTTCAAGTTCTTCACTACTGGTTCCACACTTCCAGCGTATATTATTTTTCATACATGGTTTCCCGACGTGCAATTAATAATGGTCTGGGTGTGATTTTGATTGATAAATTGTGGTCTTGGTCCAATGGGTTCTTTGTTTCTAAATTCTAAATTTTAGATTCAAATAAAGGGAGAGAGAGAGATAGAGAGAGGCAAAATCCTTTTGCTGTTTAACAATTTCTAATCGTTGTAGACTCAAATGGTGGGTATGCATTGATCTTGATCTACTCTCAAGAAAAGAAGTAGAAATTCATGTTGAGAGGCTCCCACTTTTATAGATGGAGATGCGGGTGAGGAAGCATTTTTTGTGGCTTGATTGGAAAATTTTGATGGGCAATACATCTGTGCTTTGAGGCAAAGAGATTAGAGGCATAAAGCCATGGATAAGGCCAGGGTTGAACCATCATTTTTCATGGTTTGCAGTTGATCCGTTCCATTATGTTTTAGAACGTGGTTAGAGTCGATGATTATCAATTGGAATGTGGTTAAAGGTACTTACATATTCCGGGAGCAATAAGATATCTTCAATGTAAGCATCCAAATCATATGCCTGGTCACTTGATGACTTCTCATCTAATTCTTGGACTCTTGAACTCTACTTGTCCTTAAACAGAAAAAGCTAGAGTGATGTGGAAATGTTGGAGCTGTTTATAGATACGTAGCATTGTGAATAATTGTGCTCGAGGTAGCTATGTTTGTCTCTTGATCTGTATATATTAAGTCCTTGTACGTGTCCATATTGCTAGAAATCTCCAGTTAATTTTTCTCCGAATTCTTGAAATCCACAAAGATGTGCCATTGCTGGTGTCTTGGACTCTCGTTTGTGTTTAGTAAGCTCATATGTTCTGCTCATTTCGTTTTCACAATTAGAACATTTACATTGAGCTCTTGAAAGATGTATGTGCTAAAGTTGCTAACTGACATGCAGTGTCTTGATAATAAAATTGCTTGTAAAGGTTGGAACTTGGAAGTGATGTATAGGCATGCTAACGTGAATAGATTGTTTCGAGTACCTTCATCACTTAGGACAAAGTGGTTAGAGACAGAAAGAGAGCTTCTCGTCGGGACACCTACATTTTATCGGTTATGGCAGTTAGTTACTGGATTATCATTGTGATGCTCTCTGATATGTGTCTAGCCTAGTAAATCGAATCTAATCACAAGTAACTTGAGCTCATTTCTCAGAGACCGCTCTCTTAGATGCTGGATGTAGAGCTTTTTACTCGCGGATTCTTGTTCATCCTCTCTCTCCCTCTCACTGATTAAAAAAAAAAAAAAAACGAATCTGCTTCTTGATCTTTATGGGTTTGATAGAAATTTGGTTCCAATAGATATACCAATCTAAGCATTCTGTTATCGTAGACATTTCTGATTGTTATTAATGATCATGTCAATGACAGAGTGGGAAGTCAAAGAAGAAGGGAAAGAAATTACTCAGCAGTGGGAAGACGACTGGGATGACGATGATGTCAACGACGACTTCTCGTTGCAGCTTAGGAGAGAATTGGAGAGCTATACCGAGAAGAAATGAGAAGAAGTTTTGTCCTTAAATGTTTTCATCTTCAAGATCTCATGTTTTAACCAGGTCTTTTGATCCCATGTACATGATGGTATTATGAAACATTCTTAGGAGCCTAAAACATTGTTACCTTTCAGATCAGAACATTGGAAAATCGAGACGTTTGGCACCGAAGAAAACTTCATTTTCTTGTTGGCACGGAACATGATCTTCGTTCACGAATCTTGCTATGGTTTGCTTGAGATTTATAAGATGTTACGTTCTGAATATTGGCAGGAATAGAAAACTAAGTTTGTTGTGGGTTTGTTCATTACGTGGTGGTGCATTTTTATTGTTTTCCTTCAAAGAACACATGATGAGTCGACCAATTCTTTGAGGAACAACAGATTTGAAATCCTTCTTCCCTTTGTATTCTTCTTTCTTTGGGTCTAGACCTGCATATATGTCTGTGTATACTGGTATCTACACCTTCGATGTGCGTGACCATCGACAACCATGGTACATCTTGTTCTCGTGTTTGAGAATTCAATGAACATCGTGACATGGTCATTACCACAAGAAAGATTTATGATTTGAGATTCGTTCTTCATCACATCTTACTAGGAAGAGACATAAAAAAGTTTCACCATTGTGTTTGAGATGGTCGATAATAGATTTCGGAGTTGAAAAGGAATGGGGTCTTTTTCAGATACGAGAAATGGAAAAAGATGCAATGCTCGATAATAGAGGAGGTGAACGTTTAGAACGAGAACAAATTGGGTCCTTCTACGCTCGAGACAGCAAATAGATTATTCAAATCTCTTCCCCTAGAAACTCAGCCATAAATTCTACAATCTCCCAAGTTCATCCCCTTCATATATTACAAAAGTAAATTATTAAAAAATAATAAATAAAAAAAAAACAAAGAAAAGAAAAATATTCGACAACAATCCCCACCCACAAGAAATTCTCCATTAACCCCACTTTCCCCCCTTCATCTTCTTCTTCCCTCTTAGCCCCTCCCCTTCCTCAAATTCTCCAACTGTGAGCTCCACCCCACTTACAGACGGCGGCGACGGCGGCGGAGGCGGCGGCGCTTCTTCTGAACTTCATCTCCCTCCGGCCACCGCACTCGGCGGAGGAGGAAGTGGGTGTCACTTGTCAGCTAAACTTGATTGAACAAACAAAAAAAGCATACCCTTTTCATCTTTCTCTTATAAAGGGTCATTTTGGTGCTCCAAAACCAAGCCAAATTTGGGAACAACAGCGCAAGTTCTGCAAATTGGGCAAATGGGTGTCTTCAAAAGCCATGAATCTATGCACTCAACATGGAAGCTATGCCTGCAATTGGGCAACAATCTGCATCTTTCCCCTGTTTTGAAGCCCTCTAAACAAACAACACATTCCAAATCAACGCCATTTGTGCTCTGTTTCTCCCCTGATTTGTACTCATAACAAGGCAGCTTCTCCAAATCCTGATTTGAAAGGTTCTTCCCCAAATTGCTTCTCCAAATCCCTTCCCTTTCTCCTCTGAAAGCTCTCCCCACAATACAGACATGGATCACTACCAGAACAGCGATTCCGACCAGCAACAGAACCGCCGACACCACAATCTCCATAACCATAGTACTTGAATTGAAAAACCAAACAACCAACCAACCCCAGAAGTTTCAAAAGGGTGAAAGGTTTTGTGGGTCTCTGTTCTTGTGTGTTTGAATGTCTCTGTCACGTATAGAAATCACTCATCTTGGATCTTCAAGATTACACCTTTTGCTTTGTTTTATTCACAAAGAGAAGGGCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAATTTGGCAATGAAAGAGAGTTCTTGTGGCCTTGTCCTTTTTTGGGTCTCAAATTTCTCGAACACCCTT

mRNA sequence

TAAATAAAGCAAATGGAAATAGCTGGATTCGAACAGAAGAACGCGACGCAGATTGGGTTACGACCTGATAGTTAGGGCTAAATATCCATCTGCTCGATCAGCAGATTTCTTCAGCTGGTTCAGTTTTTTTACACTCTCTCGAGACTTCCACTAGCATTCTGTCTTGCGTCCACCTCCTAGTAGAACGAAGTTCAAACTTTGTGATGGCGACTGAATCCAAAACCGCTACTGAGGAAGTTAAGATTGATCTCTTTGAAGATGATGATGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAAGAAGAAGGGAAAGAAATTACTCAGCAGTGGGAAGACGACTGGGATGACGATGATGTCAACGACGACTTCTCGTTGCAGCTTAGGAGAGAATTGGAGAGCTATACCGAGAAGAAATGAGAAGAAGTTTTGTCCTTAAATGTTTTCATCTTCAAGATCTCATGTTTTAACCAGGTCTTTTGATCCCATGTACATGATGGTATTATGAAACATTCTTAGGAGCCTAAAACATTGTTACCTTTCAGATCAGAACATTGGAAAATCGAGACGTTTGGCACCGAAGAAAACTTCATTTTCTTGTTGGCACGGAACATGATCTTCGTTCACGAATCTTGCTATGGTTTGCTTGAGATTTATAAGATGTTACGTTCTGAATATTGGCAGGAATAGAAAACTAAGTTTGTTGTGGGTTTGTTCATTACGTGGTGGTGCATTTTTATTGTTTTCCTTCAAAGAACACATGATGAGTCGACCAATTCTTTGAGGAACAACAGATTTGAAATCCTTCTTCCCTTTGTATTCTTCTTTCTTTGGGTCTAGACCTGCATATATGTCTGTGTATACTGGTATCTACACCTTCGATGTGCGTGACCATCGACAACCATGGTACATCTTGTTCTCGTGTTTGAGAATTCAATGAACATCGTGACATGGTCATTACCACAAGAAAGATTTATGATTTGAGATTCGTTCTTCATCACATCTTACTAGGAAGAGACATAAAAAAGTTTCACCATTGTGTTTGAGATGGTCGATAATAGATTTCGGAGTTGAAAAGGAATGGGGTCTTTTTCAGATACGAGAAATGGAAAAAGATGCAATGCTCGATAATAGAGGAGGTGAACGTTTAGAACGAGAACAAATTGGGTCCTTCTACGCTCGAGACAGCAAATAGATTATTCAAATCTCTTCCCCTAGAAACTCAGCCATAAATTCTACAATCTCCCAAGTTCATCCCCTTCATATATTACAAAAGTAAATTATTAAAAAATAATAAATAAAAAAAAAACAAAGAAAAGAAAAATATTCGACAACAATCCCCACCCACAAGAAATTCTCCATTAACCCCACTTTCCCCCCTTCATCTTCTTCTTCCCTCTTAGCCCCTCCCCTTCCTCAAATTCTCCAACTGTGAGCTCCACCCCACTTACAGACGGCGGCGACGGCGGCGGAGGCGGCGGCGCTTCTTCTGAACTTCATCTCCCTCCGGCCACCGCACTCGGCGGAGGAGGAAGTGGGTGTCACTTGTCAGCTAAACTTGATTGAACAAACAAAAAAAGCATACCCTTTTCATCTTTCTCTTATAAAGGGTCATTTTGGTGCTCCAAAACCAAGCCAAATTTGGGAACAACAGCGCAAGTTCTGCAAATTGGGCAAATGGGTGTCTTCAAAAGCCATGAATCTATGCACTCAACATGGAAGCTATGCCTGCAATTGGGCAACAATCTGCATCTTTCCCCTGTTTTGAAGCCCTCTAAACAAACAACACATTCCAAATCAACGCCATTTGTGCTCTGTTTCTCCCCTGATTTGTACTCATAACAAGGCAGCTTCTCCAAATCCTGATTTGAAAGGTTCTTCCCCAAATTGCTTCTCCAAATCCCTTCCCTTTCTCCTCTGAAAGCTCTCCCCACAATACAGACATGGATCACTACCAGAACAGCGATTCCGACCAGCAACAGAACCGCCGACACCACAATCTCCATAACCATAGTACTTGAATTGAAAAACCAAACAACCAACCAACCCCAGAAGTTTCAAAAGGGTGAAAGGTTTTGTGGGTCTCTGTTCTTGTGTGTTTGAATGTCTCTGTCACGTATAGAAATCACTCATCTTGGATCTTCAAGATTACACCTTTTGCTTTGTTTTATTCACAAAGAGAAGGGCTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAATTTGGCAATGAAAGAGAGTTCTTGTGGCCTTGTCCTTTTTTGGGTCTCAAATTTCTCGAACACCCTT

Coding sequence (CDS)

ATGGCGACTGAATCCAAAACCGCTACTGAGGAAGTTAAGATTGATCTCTTTGAAGATGATGATGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTCAAAGAAGAAGGGAAAGAAATTACTCAGCAGTGGGAAGACGACTGGGATGACGATGATGTCAACGACGACTTCTCGTTGCAGCTTAGGAGAGAATTGGAGAGCTATACCGAGAAGAAATGA

Protein sequence

MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK
Homology
[Close]
BLAST of Cp4.1LG09g10330 vs. ExPASy Swiss-Prot
Match: Q9XIR8 (Protein DELETION OF SUV3 SUPPRESSOR 1(I) OS=Arabidopsis thaliana OX=3702 GN=DSS1(I) PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.3e-22
Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 0 

Query: 1  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFS 60
          MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS
Sbjct: 1  MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 61 LQLRRELESYTEKK 74
           QLR+ELE+ T+KK
Sbjct: 61 RQLRKELENGTDKK 74

[Close]
BLAST of Cp4.1LG09g10330 vs. ExPASy Swiss-Prot
Match: Q9FL96 (Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana OX=3702 GN=DSS1(V) PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 2.8e-21
Identity = 53/73 (72.60%), Postives = 62/73 (84.93%), Query Frame = 0 

Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MA E K A E VK+DLFEDDDEFEEFEINE+W  KEE KE++ QWEDDWDDDDV+DDFS 
Sbjct: 1  MAAEPKAAVEVVKVDLFEDDDEFEEFEINEDWLEKEEVKEVSLQWEDDWDDDDVSDDFSR 60

Query: 61 QLRRELESYTEKK 74
          QL++ELE+ +EKK
Sbjct: 61 QLKKELENASEKK 73

[Close]
BLAST of Cp4.1LG09g10330 vs. ExPASy Swiss-Prot
Match: Q3ZBR6 (26S proteasome complex subunit SEM1 OS=Bos taurus OX=9913 GN=SEM1 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-05
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 0 

Query: 10 EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESY 69
          + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +
Sbjct: 6  QPVDLGLLEEDDEFEEFPA-EDWAGLDEDED-AHVWEDNWDDDNVEDDFSNQLRAELEKH 65

Query: 70 TEK 73
            K
Sbjct: 66 GYK 66

[Close]
BLAST of Cp4.1LG09g10330 vs. ExPASy Swiss-Prot
Match: P60896 (26S proteasome complex subunit SEM1 OS=Homo sapiens OX=9606 GN=SEM1 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-05
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 0 

Query: 10 EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESY 69
          + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +
Sbjct: 6  QPVDLGLLEEDDEFEEFPA-EDWAGLDEDED-AHVWEDNWDDDNVEDDFSNQLRAELEKH 65

Query: 70 TEK 73
            K
Sbjct: 66 GYK 66

[Close]
BLAST of Cp4.1LG09g10330 vs. ExPASy Swiss-Prot
Match: P60897 (26S proteasome complex subunit SEM1 OS=Mus musculus OX=10090 GN=Sem1 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-05
Identity = 32/63 (50.79%), Postives = 42/63 (66.67%), Query Frame = 0 

Query: 10 EEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESY 69
          + V + L E+DDEFEEF   E+W   +E ++    WED+WDDD+V DDFS QLR ELE +
Sbjct: 6  QPVDLGLLEEDDEFEEFPA-EDWAGLDEDED-AHVWEDNWDDDNVEDDFSNQLRAELEKH 65

Query: 70 TEK 73
            K
Sbjct: 66 GYK 66

[Close]
BLAST of Cp4.1LG09g10330 vs. NCBI nr
Match: XP_022954951.1 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata] >KAG7012237.1 Protein DELETION OF SUV3 SUPPRESSOR 1(I), partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139 bits (351), Expect = 1.88e-41
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 61 QLRRELESYTEKK 73
          QLRRELESYTEKK
Sbjct: 61 QLRRELESYTEKK 73

[Close]
BLAST of Cp4.1LG09g10330 vs. NCBI nr
Match: KAG6573049.1 (Protein DELETION OF SUV3 SUPPRESSOR 1(I), partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 139 bits (351), Expect = 5.15e-41
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1   MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
           MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 35  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 94

Query: 61  QLRRELESYTEKK 73
           QLRRELESYTEKK
Sbjct: 95  QLRRELESYTEKK 107

[Close]
BLAST of Cp4.1LG09g10330 vs. NCBI nr
Match: XP_022923645.1 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata] >XP_022923646.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata] >XP_023000666.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima] >XP_023000667.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima] >XP_023519106.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita pepo subsp. pepo] >XP_023519107.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 135 bits (339), Expect = 1.27e-39
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 0 

Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATE+KTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 61 QLRRELESYTEKK 73
          QLRRELES TEKK
Sbjct: 61 QLRRELESNTEKK 73

[Close]
BLAST of Cp4.1LG09g10330 vs. NCBI nr
Match: XP_004152470.1 (protein DELETION OF SUV3 SUPPRESSOR 1(I) [Cucumis sativus] >XP_008438249.1 PREDICTED: protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucumis melo] >KAA0055220.1 putative 26S proteasome complex subunit sem1-1 [Cucumis melo var. makuwa] >KGN64302.1 hypothetical protein Csa_013524 [Cucumis sativus])

HSP 1 Score: 135 bits (339), Expect = 1.27e-39
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 0 

Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATESKTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 61 QLRRELESYTEKK 73
          QLRRELES TEKK
Sbjct: 61 QLRRELESNTEKK 73

[Close]
BLAST of Cp4.1LG09g10330 vs. NCBI nr
Match: XP_038893721.1 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Benincasa hispida] >XP_038893722.1 protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Benincasa hispida])

HSP 1 Score: 132 bits (333), Expect = 1.05e-38
Identity = 69/73 (94.52%), Postives = 71/73 (97.26%), Query Frame = 0 

Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATESKTATEEVK+DLFEDDDEFEEFEINEEWEVKEEGKE+TQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATESKTATEEVKMDLFEDDDEFEEFEINEEWEVKEEGKEVTQQWEDDWDDDDVNDDFSL 60

Query: 61 QLRRELESYTEKK 73
          QLRRELES  EKK
Sbjct: 61 QLRRELESNAEKK 73

[Close]
BLAST of Cp4.1LG09g10330 vs. ExPASy TrEMBL
Match: A0A6J1GSC9 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita moschata OX=3662 GN=LOC111457056 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 9.09e-42
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 61 QLRRELESYTEKK 73
          QLRRELESYTEKK
Sbjct: 61 QLRRELESYTEKK 73

[Close]
BLAST of Cp4.1LG09g10330 vs. ExPASy TrEMBL
Match: A0A6J1KGG4 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita maxima OX=3661 GN=LOC111495037 PE=4 SV=1)

HSP 1 Score: 135 bits (339), Expect = 6.17e-40
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 0 

Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATE+KTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 61 QLRRELESYTEKK 73
          QLRRELES TEKK
Sbjct: 61 QLRRELESNTEKK 73

[Close]
BLAST of Cp4.1LG09g10330 vs. ExPASy TrEMBL
Match: A0A6J1ECF8 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita moschata OX=3662 GN=LOC111431292 PE=4 SV=1)

HSP 1 Score: 135 bits (339), Expect = 6.17e-40
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 0 

Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATE+KTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATETKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 61 QLRRELESYTEKK 73
          QLRRELES TEKK
Sbjct: 61 QLRRELESNTEKK 73

[Close]
BLAST of Cp4.1LG09g10330 vs. ExPASy TrEMBL
Match: A0A5A7UJ57 (Putative 26S proteasome complex subunit sem1-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00610 PE=4 SV=1)

HSP 1 Score: 135 bits (339), Expect = 6.17e-40
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 0 

Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATESKTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 61 QLRRELESYTEKK 73
          QLRRELES TEKK
Sbjct: 61 QLRRELESNTEKK 73

[Close]
BLAST of Cp4.1LG09g10330 vs. ExPASy TrEMBL
Match: A0A0A0LU33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046000 PE=4 SV=1)

HSP 1 Score: 135 bits (339), Expect = 6.17e-40
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 0 

Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MATESKTATEEVKIDLFEDDDEFEEFEINEEWE+KEEGKEITQQWEDDWDDDDVNDDFSL
Sbjct: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEMKEEGKEITQQWEDDWDDDDVNDDFSL 60

Query: 61 QLRRELESYTEKK 73
          QLRRELES TEKK
Sbjct: 61 QLRRELESNTEKK 73

[Close]
BLAST of Cp4.1LG09g10330 vs. TAIR 10
Match: AT1G64750.1 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 104.8 bits (260), Expect = 3.1e-23
Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 0 

Query: 1  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFS 60
          MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS
Sbjct: 1  MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 61 LQLRRELESYTEKK 74
           QLR+ELE+ T+KK
Sbjct: 61 RQLRKELENGTDKK 74

[Close]
BLAST of Cp4.1LG09g10330 vs. TAIR 10
Match: AT1G64750.2 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 104.8 bits (260), Expect = 3.1e-23
Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 0 

Query: 1  MATESKTATEE-VKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFS 60
          MA E K AT E VK+DLFEDDDEFEEFEINE+W  KEE KE++QQWEDDWDDDDVNDDFS
Sbjct: 1  MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 61 LQLRRELESYTEKK 74
           QLR+ELE+ T+KK
Sbjct: 61 RQLRKELENGTDKK 74

[Close]
BLAST of Cp4.1LG09g10330 vs. TAIR 10
Match: AT5G45010.1 (DSS1 homolog on chromosome V )

HSP 1 Score: 102.1 bits (253), Expect = 2.0e-22
Identity = 53/73 (72.60%), Postives = 62/73 (84.93%), Query Frame = 0 

Query: 1  MATESKTATEEVKIDLFEDDDEFEEFEINEEWEVKEEGKEITQQWEDDWDDDDVNDDFSL 60
          MA E K A E VK+DLFEDDDEFEEFEINE+W  KEE KE++ QWEDDWDDDDV+DDFS 
Sbjct: 1  MAAEPKAAVEVVKVDLFEDDDEFEEFEINEDWLEKEEVKEVSLQWEDDWDDDDVSDDFSR 60

Query: 61 QLRRELESYTEKK 74
          QL++ELE+ +EKK
Sbjct: 61 QLKKELENASEKK 73

[Close]
BLAST of Cp4.1LG09g10330 vs. TAIR 10
Match: AT1G64750.3 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 84.7 bits (208), Expect = 3.3e-17
Identity = 57/115 (49.57%), Postives = 64/115 (55.65%), Query Frame = 0 

Query: 1   MATESKTATEE-VKIDLFEDDDEFEEFEINE----------------------------- 60
           MA E K AT E VK+DLFEDDDEFEEFEINE                             
Sbjct: 1   MAAEPKAATAEVVKMDLFEDDDEFEEFEINEVDSSDLTSSCIERIDKDGLVYELSRSDMK 60

Query: 61  ------------EWEVKEEGKEITQQWEDDWDDDDVNDDFSLQLRRELESYTEKK 74
                       +W  KEE KE++QQWEDDWDDDDVNDDFS QLR+ELE+ T+KK
Sbjct: 61  TNLFDVNFRCEIDWLEKEEVKEVSQQWEDDWDDDDVNDDFSRQLRKELENGTDKK 115

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g10330 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9XIR84.3e-2277.03Protein DELETION OF SUV3 SUPPRESSOR 1(I) OS=Arabidopsis thaliana OX=3702 GN=DSS1... [more]
Q9FL962.8e-2172.60Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana OX=3702 GN=DSS1(V) ... [more]
Q3ZBR61.7e-0550.7926S proteasome complex subunit SEM1 OS=Bos taurus OX=9913 GN=SEM1 PE=3 SV=1[more]
P608961.7e-0550.7926S proteasome complex subunit SEM1 OS=Homo sapiens OX=9606 GN=SEM1 PE=1 SV=1[more]
P608971.7e-0550.7926S proteasome complex subunit SEM1 OS=Mus musculus OX=10090 GN=Sem1 PE=3 SV=1[more]
BLAST of Cp4.1LG09g10330 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022954951.11.88e-41100.00protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata] >KAG7012237.1... [more]
KAG6573049.15.15e-41100.00Protein DELETION OF SUV3 SUPPRESSOR 1(I), partial [Cucurbita argyrosperma subsp.... [more]
XP_022923645.11.27e-3997.26protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita moschata] >XP_022923646... [more]
XP_004152470.11.27e-3997.26protein DELETION OF SUV3 SUPPRESSOR 1(I) [Cucumis sativus] >XP_008438249.1 PREDI... [more]
XP_038893721.11.05e-3894.52protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Benincasa hispida] >XP_038893722.... [more]
BLAST of Cp4.1LG09g10330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GSC99.09e-42100.00protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A6J1KGG46.17e-4097.26protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1ECF86.17e-4097.26protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A5A7UJ576.17e-4097.26Putative 26S proteasome complex subunit sem1-1 OS=Cucumis melo var. makuwa OX=11... [more]
A0A0A0LU336.17e-4097.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046000 PE=4 SV=1[more]
BLAST of Cp4.1LG09g10330 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G64750.13.1e-2377.03deletion of SUV3 suppressor 1(I) [more]
AT1G64750.23.1e-2377.03deletion of SUV3 suppressor 1(I) [more]
AT5G45010.12.0e-2272.60DSS1 homolog on chromosome V [more]
AT1G64750.33.3e-1749.57deletion of SUV3 suppressor 1(I) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 59..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..53
NoneNo IPR availablePANTHERPTHR16771:SF8OS01G0316800 PROTEINcoord: 1..73
IPR007834DSS1/SEM1SMARTSM01385DSS1_SEM1_2coord: 9..68
e-value: 8.1E-23
score: 91.8
IPR007834DSS1/SEM1PFAMPF05160DSS1_SEM1coord: 10..67
e-value: 9.2E-18
score: 64.1
IPR007834DSS1/SEM1PANTHERPTHR1677126 PROTEASOME COMPLEX SUBUNIT DSS1coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g10330.1Cp4.1LG09g10330.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000724 double-strand break repair via homologous recombination
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0043248 proteasome assembly
cellular_component GO:0008541 proteasome regulatory particle, lid subcomplex