Cp4.1LG09g10280 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCACAACAACTCTAGTCATTCCGCTCTTCCTCTATCTCGTCCTCTCGTCTTTTCTCCTATCCATTTCCACCGCCAACATCCACTCCAACAGTTGCCGATCCTTCTGCGGCAACATCACAATCGACTATCCCTTCGCTCTCCAGTACGGCTGCGGCCATCCTGGCTACCGCGACCTTCTCTACTGCATGAACGACGTTTTAATGTTCCACATCCGATCCGGATCCTACAGAGTCCTAGACATCGATTACGCTTACGAAGCCCTAACTCTCCACGACCCTCACATGTCGACCTGCGACACAATCGTCCTCGGCCGCCGCGGCAACGGCTTCGACATCGAGGAATGGCGTTCGCCGTACCTGAATCCGACGGCCGATAACGCCTTCCTCCTCATCGGTTGCTCCGCCCAATCGCCACTCTTCCAAGGGTTCCCGAACAAGCACCTAGTCTGTAGAAACGTTTCCGGACTGGGCTGTGAGGAGTATTATGACTGTCCGGCTTGGGGTATATTGGGCCACAGACGACCGGGCCGAAATTATGGGCCCGGCCCACCAGAGTGCTGTGCGGTTCCTTTTGGGTCCATTAAGGCCATAAATCTCACTAAGCTTCAGTGTGAAGGCTATAGCAGTGCTTATAATCTGGCCCCGTTGAGGCTTAATGGGCCTGATCAATGGGCCTATGGGATACGTGTGAAATATTCGGTCCAAGCAAACGAAGACTTTTGCCGCGCGTGCCAAGCCACTGGCGGCACGTGTGGATTTGGTACGGATGGTGTTAGACAGCTGTGCATGTGTGGTAGTTCGAATTCTTCCTCCACTTGTGATTTTGGTAAGGCAGGGGCAATTTCGTAATATATATACATTTTTCGTGTTTAATAAATTTTAAAATTTTTAATTTTATATTTAATAAATTCTTTAAAATGTTCTTTTTTAAATTAATTGATCAATTATATTAAATTTAAATTTTATAACTACGGGTAAAACTGTAAATTATAATTCTCCTCGAGGAACATGATTCCTTCGAGTGTTCTTTGTAAAATTAAATGAAATTTTTTTTAATTTTGTACCTAAAGCAAAGTTTTTTTCTTGTTCCTGTTTCGTTTTTGAATCTCCTTAATTCAACGAGTAACCAAAATATTTTAATTATATTAAATTATATTTATGTTGCATAATTCGTGTAATTTGCAGTTATGACCTCATTATCGACAAGGATGACATCATGGACACTAATCAAAGCTATATTAGCAGGTAAATATATGGTTAAATATATATATATATATATATATATCTGATGATAATTTGTATAATGATGATTTATTTGTAAATATGATTGTAGGAAGCTTGATGGTGATGTTTAGTAGCTGCTCCAAGGAAATTGGAATTAGTTCATAAATTTTGAGCAATTTTATAGATGTAATGCATTAGGAGTAGAATTTCATAAGCTTTAGTATTGTTTTTGTTGCGAAAACTTGAGTGAATCTGTACATGTGTACACTAACGTTTTTTTAAACGGAATCTAACCAAAGATGTAAAATGATACAGTTATAAATTCAAAGTTTTAATTAGATAGGTTTATTTAACCTGCGGGACCCACCTCTAGGAATCCCGTTCCTAGGAATCCCAAAACATGGGAACAGGAAGGGAGTGGAGAAAGATTTCTCCTCGTTAGCTACACAGCGCCGGAGACAGAGGTTACATTCTCCATCCCCGATCCCGACCCTATCTCACACATAAAGGGTCCCGACCCTATTACACTTTAAAACCCTTTTTTAAAGTACAATGGACAATCTTTCAACACTGACTAAAACATGAACATTTATACCTGTTTTTGAAATTAAATCTTGAAGACACCAACAAACATTTGCTTCATTGCTACATAGTGAAGCAGTGAAGCAAAGTTCATAGCTGAGCAGAGTCATTGGCGATGGCACCAGCAGCAGCAAGAAGTGGCATCAGCTGACCACTGCTGTGCTTATTTGTAACCGCTGCAATGACACAAATGGAGATAGAAGATGAGCAAAATTTGGGAGAAGCAGCCACAAGGTAGCCAATTATGCTATGAAGTCAGCAGGTGTTACCATCGCAACCACCGATGTGTTTTCCTCCGATAAACACGTTAGGCACCGAGGTTTGACCCGTCCACTCTGCTAAAGCTGATTGAATTGCATCTCCATCACCTTCATATGGATGAATTCATCAATATACTGTTTGAAGAACAGTCACAGGCAGCT ATGTCCACAACAACTCTAGTCATTCCGCTCTTCCTCTATCTCGTCCTCTCGTCTTTTCTCCTATCCATTTCCACCGCCAACATCCACTCCAACAGTTGCCGATCCTTCTGCGGCAACATCACAATCGACTATCCCTTCGCTCTCCAGTACGGCTGCGGCCATCCTGGCTACCGCGACCTTCTCTACTGCATGAACGACGTTTTAATGTTCCACATCCGATCCGGATCCTACAGAGTCCTAGACATCGATTACGCTTACGAAGCCCTAACTCTCCACGACCCTCACATGTCGACCTGCGACACAATCGTCCTCGGCCGCCGCGGCAACGGCTTCGACATCGAGGAATGGCGTTCGCCGTACCTGAATCCGACGGCCGATAACGCCTTCCTCCTCATCGGTTGCTCCGCCCAATCGCCACTCTTCCAAGGGTTCCCGAACAAGCACCTAGTCTGTAGAAACGTTTCCGGACTGGGCTGTGAGGAGTATTATGACTGTCCGGCTTGGGGTATATTGGGCCACAGACGACCGGGCCGAAATTATGGGCCCGGCCCACCAGAGTGCTGTGCGGTTCCTTTTGGGTCCATTAAGGCCATAAATCTCACTAAGCTTCAGTGTGAAGGCTATAGCAGTGCTTATAATCTGGCCCCGTTGAGGCTTAATGGGCCTGATCAATGGGCCTATGGGATACGTGTGAAATATTCGGTCCAAGCAAACGAAGACTTTTGCCGCGCGTGCCAAGCCACTGGCGGCACGTGTGGATTTGGTACGGATGGTGTTAGACAGCTGTGCATGTGTGGTAGTTCGAATTCTTCCTCCACTTGTGATTTTGGTAAGGCAGGGGCAATTTCTTATGACCTCATTATCGACAAGGATGACATCATGGACACTAATCAAAGCTATATTAGCAGGAAGCTTGATGGTGATGTTTAGTAGCTGCTCCAAGGAAATTGGAATTAGTTCATAAATTTTGAGCAATTTTATAGATGTAATGCATTAGGAGTAGAATTTCATAAGCTTTAGTATTGTTTTTGTTGCGAAAACTTGAGTGAATCTGTACATGTGTACACTAACGTTTTTTTAAACGGAATCTAACCAAAGATGTAAAATGATACAGTTATAAATTCAAAGTTTTAATTAGATAGGTTTATTTAACCTGCGGGACCCACCTCTAGGAATCCCGTTCCTAGGAATCCCAAAACATGGGAACAGGAAGGGAGTGGAGAAAGATTTCTCCTCGTTAGCTACACAGCGCCGGAGACAGAGGTTACATTCTCCATCCCCGATCCCGACCCTATCTCACACATAAAGGGTCCCGACCCTATTACACTTTAAAACCCTTTTTTAAAGTACAATGGACAATCTTTCAACACTGACTAAAACATGAACATTTATACCTGTTTTTGAAATTAAATCTTGAAGACACCAACAAACATTTGCTTCATTGCTACATAGTGAAGCAGTGAAGCAAAGTTCATAGCTGAGCAGAGTCATTGGCGATGGCACCAGCAGCAGCAAGAAGTGGCATCAGCTGACCACTGCTGTGCTTATTTGTAACCGCTGCAATGACACAAATGGAGATAGAAGATGAGCAAAATTTGGGAGAAGCAGCCACAAGGTAGCCAATTATGCTATGAAGTCAGCAGGTGTTACCATCGCAACCACCGATGTGTTTTCCTCCGATAAACACGTTAGGCACCGAGGTTTGACCCGTCCACTCTGCTAAAGCTGATTGAATTGCATCTCCATCACCTTCATATGGATGAATTCATCAATATACTGTTTGAAGAACAGTCACAGGCAGCT ATGTCCACAACAACTCTAGTCATTCCGCTCTTCCTCTATCTCGTCCTCTCGTCTTTTCTCCTATCCATTTCCACCGCCAACATCCACTCCAACAGTTGCCGATCCTTCTGCGGCAACATCACAATCGACTATCCCTTCGCTCTCCAGTACGGCTGCGGCCATCCTGGCTACCGCGACCTTCTCTACTGCATGAACGACGTTTTAATGTTCCACATCCGATCCGGATCCTACAGAGTCCTAGACATCGATTACGCTTACGAAGCCCTAACTCTCCACGACCCTCACATGTCGACCTGCGACACAATCGTCCTCGGCCGCCGCGGCAACGGCTTCGACATCGAGGAATGGCGTTCGCCGTACCTGAATCCGACGGCCGATAACGCCTTCCTCCTCATCGGTTGCTCCGCCCAATCGCCACTCTTCCAAGGGTTCCCGAACAAGCACCTAGTCTGTAGAAACGTTTCCGGACTGGGCTGTGAGGAGTATTATGACTGTCCGGCTTGGGGTATATTGGGCCACAGACGACCGGGCCGAAATTATGGGCCCGGCCCACCAGAGTGCTGTGCGGTTCCTTTTGGGTCCATTAAGGCCATAAATCTCACTAAGCTTCAGTGTGAAGGCTATAGCAGTGCTTATAATCTGGCCCCGTTGAGGCTTAATGGGCCTGATCAATGGGCCTATGGGATACGTGTGAAATATTCGGTCCAAGCAAACGAAGACTTTTGCCGCGCGTGCCAAGCCACTGGCGGCACGTGTGGATTTGGTACGGATGGTGTTAGACAGCTGTGCATGTGTGGTAGTTCGAATTCTTCCTCCACTTGTGATTTTGGTAAGGCAGGGGCAATTTCTTATGACCTCATTATCGACAAGGATGACATCATGGACACTAATCAAAGCTATATTAGCAGGAAGCTTGATGGTGATGTTTAG MSTTTLVIPLFLYLVLSSFLLSISTANIHSNSCRSFCGNITIDYPFALQYGCGHPGYRDLLYCMNDVLMFHIRSGSYRVLDIDYAYEALTLHDPHMSTCDTIVLGRRGNGFDIEEWRSPYLNPTADNAFLLIGCSAQSPLFQGFPNKHLVCRNVSGLGCEEYYDCPAWGILGHRRPGRNYGPGPPECCAVPFGSIKAINLTKLQCEGYSSAYNLAPLRLNGPDQWAYGIRVKYSVQANEDFCRACQATGGTCGFGTDGVRQLCMCGSSNSSSTCDFGKAGAISYDLIIDKDDIMDTNQSYISRKLDGDV Homology
BLAST of Cp4.1LG09g10280 vs. NCBI nr
Match: KAG7012253.1 (hypothetical protein SDJN02_25005, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 648 bits (1672), Expect = 9.74e-235 Identity = 304/309 (98.38%), Postives = 307/309 (99.35%), Query Frame = 0
BLAST of Cp4.1LG09g10280 vs. NCBI nr
Match: XP_023542539.1 (uncharacterized protein LOC111802420 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 594 bits (1532), Expect = 1.01e-213 Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0
BLAST of Cp4.1LG09g10280 vs. NCBI nr
Match: XP_022954591.1 (uncharacterized protein LOC111456814 [Cucurbita moschata]) HSP 1 Score: 592 bits (1526), Expect = 2.53e-212 Identity = 274/276 (99.28%), Postives = 275/276 (99.64%), Query Frame = 0
BLAST of Cp4.1LG09g10280 vs. NCBI nr
Match: KAG6573066.1 (hypothetical protein SDJN03_26953, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 592 bits (1526), Expect = 5.91e-212 Identity = 274/276 (99.28%), Postives = 275/276 (99.64%), Query Frame = 0
BLAST of Cp4.1LG09g10280 vs. NCBI nr
Match: XP_022994636.1 (uncharacterized protein LOC111490288 [Cucurbita maxima]) HSP 1 Score: 580 bits (1496), Expect = 9.43e-208 Identity = 268/276 (97.10%), Postives = 272/276 (98.55%), Query Frame = 0
BLAST of Cp4.1LG09g10280 vs. ExPASy TrEMBL
Match: A0A6J1GRA7 (uncharacterized protein LOC111456814 OS=Cucurbita moschata OX=3662 GN=LOC111456814 PE=4 SV=1) HSP 1 Score: 592 bits (1526), Expect = 1.23e-212 Identity = 274/276 (99.28%), Postives = 275/276 (99.64%), Query Frame = 0
BLAST of Cp4.1LG09g10280 vs. ExPASy TrEMBL
Match: A0A6J1JZQ3 (uncharacterized protein LOC111490288 OS=Cucurbita maxima OX=3661 GN=LOC111490288 PE=4 SV=1) HSP 1 Score: 580 bits (1496), Expect = 4.57e-208 Identity = 268/276 (97.10%), Postives = 272/276 (98.55%), Query Frame = 0
BLAST of Cp4.1LG09g10280 vs. ExPASy TrEMBL
Match: A0A5D3BLE9 (Glycosyl transferase, family 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003730 PE=4 SV=1) HSP 1 Score: 541 bits (1394), Expect = 1.68e-193 Identity = 247/283 (87.28%), Postives = 264/283 (93.29%), Query Frame = 0
BLAST of Cp4.1LG09g10280 vs. ExPASy TrEMBL
Match: A0A1S3AWN5 (uncharacterized protein LOC103483617 OS=Cucumis melo OX=3656 GN=LOC103483617 PE=4 SV=1) HSP 1 Score: 533 bits (1374), Expect = 3.92e-190 Identity = 243/276 (88.04%), Postives = 259/276 (93.84%), Query Frame = 0
BLAST of Cp4.1LG09g10280 vs. ExPASy TrEMBL
Match: A0A0A0LTJ0 (GUB_WAK_bind domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G046160 PE=4 SV=1) HSP 1 Score: 532 bits (1371), Expect = 1.12e-189 Identity = 242/276 (87.68%), Postives = 259/276 (93.84%), Query Frame = 0
BLAST of Cp4.1LG09g10280 vs. TAIR 10
Match: AT5G50290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 300 Blast hits to 300 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 400.6 bits (1028), Expect = 1.1e-111 Identity = 167/248 (67.34%), Postives = 207/248 (83.47%), Query Frame = 0
BLAST of Cp4.1LG09g10280 vs. TAIR 10
Match: AT3G17350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50290.1); Has 203 Blast hits to 203 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 168.3 bits (425), Expect = 9.6e-42 Identity = 93/275 (33.82%), Postives = 140/275 (50.91%), Query Frame = 0
BLAST of Cp4.1LG09g10280 vs. TAIR 10
Match: AT1G10380.1 (Putative membrane lipoprotein ) HSP 1 Score: 132.9 bits (333), Expect = 4.5e-31 Identity = 85/280 (30.36%), Postives = 129/280 (46.07%), Query Frame = 0
BLAST of Cp4.1LG09g10280 vs. TAIR 10
Match: AT1G11915.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17350.1); Has 261 Blast hits to 261 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 261; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 120.6 bits (301), Expect = 2.3e-27 Identity = 91/284 (32.04%), Postives = 127/284 (44.72%), Query Frame = 0
BLAST of Cp4.1LG09g10280 vs. TAIR 10
Match: AT1G21250.1 (cell wall-associated kinase ) HSP 1 Score: 45.4 bits (106), Expect = 9.4e-05 Identity = 44/166 (26.51%), Postives = 71/166 (42.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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