Cp4.1LG09g09750 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g09750
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RPM1-interacting protein 4-like
Location	Cp4.1LG09: 8737944 .. 8740174 (+)
RNA-Seq Expression	Cp4.1LG09g09750
Synteny	Cp4.1LG09g09750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANGACGTGAATCCCACGTTATCTTGCGTGTCGTTTCGATTTCAACTCTGTTTTGGGAGCGTTTGATTCGCAGGGTTGGAGGTTTGATAAGAAATCACTGACGATTTGTTTTCTTTTCGTTTTTGTTTTCATCGTATCCGATCCCCCGCCCTGCGTCCTGCGATCATGGCACCGGTAAGTTTTATACTCCAATTTCCATGCATCTTCGATTTTTAATTAGAAGAATTCAACTTTTCGTTCTGTTTCCCCAAAGAAATTGCGATTGTGTTCATCGGGATGATCTAAAGGGATTGATTAAACACACACCAATCGGTGATTAGGCTACATGGATGTAATCGTAGAATTTGGTTATTGAAATAAGGTATTGATTAATCAATGGTGGCTGAGATGAAGGAGGGAGATGTGATTCCTTTGAAGCTATCAATGCTCTAGAATGAAATAACAAATCGCCATGGTTTGTTTTCTCCTTCGTTTTATTACAATTGACGTGTTGGAGAACATTTAATGTAGAAATTCAATCTTGTTTGTATGTTTTAACAAGATCCGAGCAGGGAAGTGTAAGAATTTATGCATGAAAATATGAACATTTAGTTAGGTTGATTAGATTTTCAGTCATGGTAGCCTTATTAGGGATTTGCTAGATTGGATATATAGGAACTCATGTCCATGGCACCATTCCTGCACTGAAATATTTGCGTATTTCAACATTTTAGAACATAGAATAGGTTGGGCGTAGACAAATCCGGTGGAAAATTTAGAGCTCCACTGTTCAAGAAAACCAGAATAGGAGAATGCTTAGAAGTGGTGAACAGCAGTTGGAAGGTCTCAGTCTTTTGCTAGGTTAAATGGTTCTCTATGATCTGTTTATAAGGAGTTTTATAATTATTGTATGGCCCTTAATCTTGTTCATTGAAACTTCTTGTAATCCAAAAGGAAACCCATCTAGGAAACACAATCAACATTCCCAGTTCATGGAAAATTGAAAATACTGATCTAGATAAGGGAGAATTGTCCATATTGCTTATTTGCAGACTAAAAAGTGAAAAAAATTTATATCACTTCATCCTTCAATGCGCCATATCTGTCTTAAATTCTGTTGGATTCTGCCTGCGCTTCCTTTTGCCAATCCTTCCATCTGTAGAAGAGTTGTAGGCTATAAGTAATTGTGGGCTGTTTGTTATCTGAAGTCATTTACCAGCAGAGATCATTGAACATTTTTTCAAGATGTTAGTAGTAGCATGCTTAATAAAGTCTCATGGAGATAGCAGGACAAGGGTCGTCCACTGCCGAAGTTCGGGGAATGGGATGTAGTAAATAAGATCATTAAACATTTTTCAAAGCTTTTAGTAGTAGCATGCTTAGTAAAGTCTCATGTAGATATCATTGCACAACTGCAGCAGGACAACGGTCGTCCACTGCCGAAGTTCGGGGAATGGGATGTAAATAAGATCATTAAACATTTTTCAAAGATTTTAGTAGTACCATGCTTAGTGAAGTCTCATGTAGATATCATTGCATAACTGCAGCAGGACAAGGGTCGTCCACTGCCGAAGTTCGGGGAATGGGATGTAAATAATCCTGCATCTGCTGAGGGATTTACGGTCATATTTAACAAGGCTAGAGATGAGAAGAAGACTACTGGAAGTGTTGCCAATATGGTTTCTTCACAAAGTAATGAGCCTGCCTACAACAATGAAAGTTTCCCTCAGTCTCCTCCACCAAAGGTCTGTTTATTAGAAGACTTAGGAATCAATTTGTTCTAGATATCTTGAATCTAATCTGTTCTTTGGTATTTGAATTGCAGAAGAGGTGGTTTTGCTGTGGTTGATGCCACCACAGTGGTTTCAGGGTCTTGACTTGTGTAATCCATTGTGAAAGCCCGTAAATTTGAGGGCCCTATCCAACGGTGGATCACTGGATCACAACAAAGTTGTTGCACCAAAAAATGACTCATACTATTCCTTTTCCCTTTTCACTTTGGCTTTCACGCTTCATTGACGTTATAAAATAATGTTTATCACATGTTATTCTGTATTTGCATTGTAATACAGAATGGAAAGGATAAATTCCATTGTCGAGATCTTTTTTCAATTTCATGATGATGATCTTTATGTGGACCTATGGTGGAAGGATTCTGATGGGAACTTTCTATAAATTAGCATGCTTTGTTTTTACCC

mRNA sequence

CGAGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANGACGTGAATCCCACGTTATCTTGCGTGTCGTTTCGATTTCAACTCTGTTTTGGGAGCGTTTGATTCGCAGGGTTGGAGGTTTGATAAGAAATCACTGACGATTTGTTTTCTTTTCGTTTTTGTTTTCATCGTATCCGATCCCCCGCCCTGCGTCCTGCGATCATGGCACCGGACAAGGGTCGTCCACTGCCGAAGTTCGGGGAATGGGATGTAGTAAATAAGATCATTAAACATTTTTCAAAGCTTTTAGTAGTAGCATGCTTAGTAAAGTCTCATGTAGATATCATTGCACAACTGCAGCAGGACAACGGTCGTCCACTGCCGAAGTTCGGGGAATGGGATCAGGACAAGGGTCGTCCACTGCCGAAGTTCGGGGAATGGGATGTAAATAATCCTGCATCTGCTGAGGGATTTACGGTCATATTTAACAAGGCTAGAGATGAGAAGAAGACTACTGGAAGTGTTGCCAATATGGTTTCTTCACAAAGTAATGAGCCTGCCTACAACAATGAAAGTTTCCCTCAGTCTCCTCCACCAAAGAAGAGGTGGTTTTGCTGTGGTTGATGCCACCACAGTGGTTTCAGGGTCTTGACTTGTGTAATCCATTGTGAAAGCCCGTAAATTTGAGGGCCCTATCCAACGGTGGATCACTGGATCACAACAAAGTTGTTGCACCAAAAAATGACTCATACTATTCCTTTTCCCTTTTCACTTTGGCTTTCACGCTTCATTGACGTTATAAAATAATGTTTATCACATGTTATTCTGTATTTGCATTGTAATACAGAATGGAAAGGATAAATTCCATTGTCGAGATCTTTTTTCAATTTCATGATGATGATCTTTATGTGGACCTATGGTGGAAGGATTCTGATGGGAACTTTCTATAAATTAGCATGCTTTGTTTTTACCC

Coding sequence (CDS)

ATGGCACCGGACAAGGGTCGTCCACTGCCGAAGTTCGGGGAATGGGATGTAGTAAATAAGATCATTAAACATTTTTCAAAGCTTTTAGTAGTAGCATGCTTAGTAAAGTCTCATGTAGATATCATTGCACAACTGCAGCAGGACAACGGTCGTCCACTGCCGAAGTTCGGGGAATGGGATCAGGACAAGGGTCGTCCACTGCCGAAGTTCGGGGAATGGGATGTAAATAATCCTGCATCTGCTGAGGGATTTACGGTCATATTTAACAAGGCTAGAGATGAGAAGAAGACTACTGGAAGTGTTGCCAATATGGTTTCTTCACAAAGTAATGAGCCTGCCTACAACAATGAAAGTTTCCCTCAGTCTCCTCCACCAAAGAAGAGGTGGTTTTGCTGTGGTTGA

Protein sequence

MAPDKGRPLPKFGEWDVVNKIIKHFSKLLVVACLVKSHVDIIAQLQQDNGRPLPKFGEWDQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQSPPPKKRWFCCG

Homology

[Close]

BLAST of Cp4.1LG09g09750 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.0e-16
Identity = 44/71 (61.97%), Postives = 50/71 (70.42%), Query Frame = 0


Query: 62  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQ 121
           DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G   +    +S+E    +     
Sbjct: 3   DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGS--PGKSSEGHVKSGGGDP 62

Query: 122 SPPPKKRWFCC 133
           S P  K+W CC
Sbjct: 63  SKPQPKKWLCC 71

[Close]

BLAST of Cp4.1LG09g09750 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.6e-06
Identity = 32/74 (43.24%), Postives = 44/74 (59.46%), Query Frame = 0


Query: 51  RPLPKFGEWDQ--DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQ 110
           RP P     D+  +K   +PKFG+WD NNP+SA+G+T IFNK R+E+    S AN VS  
Sbjct: 130 RPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREER---SSGAN-VSGS 189

Query: 111 SNEPAYNNESFPQS 123
           S  P + +   P +
Sbjct: 190 SRTPTHQSSRNPNN 199

[Close]

BLAST of Cp4.1LG09g09750 vs. NCBI nr
Match: XP_022954832.1 (RPM1-interacting protein 4-like [Cucurbita moschata] >XP_023542808.1 RPM1-interacting protein 4-like [Cucurbita pepo subsp. pepo] >KAG6573102.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012289.1 RPM1-interacting protein 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 157 bits (398), Expect = 1.56e-47
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 61  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFP 120
           QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFP
Sbjct: 4   QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFP 63

Query: 121 QSPPPKKRWFCCG 133
           QSPPPKKRWFCCG
Sbjct: 64  QSPPPKKRWFCCG 76

[Close]

BLAST of Cp4.1LG09g09750 vs. NCBI nr
Match: XP_022994173.1 (RPM1-interacting protein 4-like [Cucurbita maxima])

HSP 1 Score: 154 bits (390), Expect = 2.59e-46
Identity = 72/73 (98.63%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 61  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFP 120
           QDKG PLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFP
Sbjct: 4   QDKGCPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFP 63

Query: 121 QSPPPKKRWFCCG 133
           QSPPPKKRWFCCG
Sbjct: 64  QSPPPKKRWFCCG 76

[Close]

BLAST of Cp4.1LG09g09750 vs. NCBI nr
Match: XP_008439256.1 (PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo])

HSP 1 Score: 139 bits (349), Expect = 4.55e-40
Identity = 61/73 (83.56%), Postives = 67/73 (91.78%), Query Frame = 0


Query: 61  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFP 120
           QD+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  + NEP +NNES+P
Sbjct: 4   QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGNAANMVPKERNEPVFNNESYP 63

Query: 121 QSPPPKKRWFCCG 133
           Q PPPKKRWFCCG
Sbjct: 64  QYPPPKKRWFCCG 76

[Close]

BLAST of Cp4.1LG09g09750 vs. NCBI nr
Match: XP_008439265.1 (PREDICTED: RPM1-interacting protein 4 isoform X2 [Cucumis melo])

HSP 1 Score: 137 bits (344), Expect = 2.55e-39
Identity = 60/72 (83.33%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 62  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQ 121
           D+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  + NEP +NNES+PQ
Sbjct: 4   DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGNAANMVPKERNEPVFNNESYPQ 63

Query: 122 SPPPKKRWFCCG 133
            PPPKKRWFCCG
Sbjct: 64  YPPPKKRWFCCG 75

[Close]

BLAST of Cp4.1LG09g09750 vs. NCBI nr
Match: XP_038894676.1 (protein NOI4 isoform X1 [Benincasa hispida])

HSP 1 Score: 136 bits (343), Expect = 3.73e-39
Identity = 61/73 (83.56%), Postives = 66/73 (90.41%), Query Frame = 0


Query: 61  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFP 120
           QDKGRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ AN V  Q +EP +NNES+P
Sbjct: 4   QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQISEPVFNNESYP 63

Query: 121 QSPPPKKRWFCCG 133
           Q PPPKKRWFCCG
Sbjct: 64  QYPPPKKRWFCCG 76

[Close]

BLAST of Cp4.1LG09g09750 vs. ExPASy TrEMBL
Match: A0A6J1GRZ4 (RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111456977 PE=4 SV=1)

HSP 1 Score: 157 bits (398), Expect = 7.56e-48
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 61  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFP 120
           QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFP
Sbjct: 4   QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFP 63

Query: 121 QSPPPKKRWFCCG 133
           QSPPPKKRWFCCG
Sbjct: 64  QSPPPKKRWFCCG 76

[Close]

BLAST of Cp4.1LG09g09750 vs. ExPASy TrEMBL
Match: A0A6J1K4F5 (RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111489992 PE=4 SV=1)

HSP 1 Score: 154 bits (390), Expect = 1.25e-46
Identity = 72/73 (98.63%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 61  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFP 120
           QDKG PLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFP
Sbjct: 4   QDKGCPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFP 63

Query: 121 QSPPPKKRWFCCG 133
           QSPPPKKRWFCCG
Sbjct: 64  QSPPPKKRWFCCG 76

[Close]

BLAST of Cp4.1LG09g09750 vs. ExPASy TrEMBL
Match: A0A1S3AZ04 (RPM1-interacting protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484092 PE=4 SV=1)

HSP 1 Score: 139 bits (349), Expect = 2.20e-40
Identity = 61/73 (83.56%), Postives = 67/73 (91.78%), Query Frame = 0


Query: 61  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFP 120
           QD+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  + NEP +NNES+P
Sbjct: 4   QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGNAANMVPKERNEPVFNNESYP 63

Query: 121 QSPPPKKRWFCCG 133
           Q PPPKKRWFCCG
Sbjct: 64  QYPPPKKRWFCCG 76

[Close]

BLAST of Cp4.1LG09g09750 vs. ExPASy TrEMBL
Match: A0A1S3AYE6 (RPM1-interacting protein 4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484092 PE=4 SV=1)

HSP 1 Score: 137 bits (344), Expect = 1.24e-39
Identity = 60/72 (83.33%), Postives = 66/72 (91.67%), Query Frame = 0


Query: 62  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQ 121
           D+GRPLPKFGEWDVNNPASAEGFTVIFNKAR+EKKTTG+ ANMV  + NEP +NNES+PQ
Sbjct: 4   DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGNAANMVPKERNEPVFNNESYPQ 63

Query: 122 SPPPKKRWFCCG 133
            PPPKKRWFCCG
Sbjct: 64  YPPPKKRWFCCG 75

[Close]

BLAST of Cp4.1LG09g09750 vs. ExPASy TrEMBL
Match: A0A6J1C6I4 (uncharacterized protein LOC111008714 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008714 PE=4 SV=1)

HSP 1 Score: 137 bits (344), Expect = 7.70e-39
Identity = 63/84 (75.00%), Postives = 69/84 (82.14%), Query Frame = 0


Query: 50  GRPLPKFGEWDQDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQS 109
           G  L     ++QD+GRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTG+ A+ VS Q 
Sbjct: 53  GELLEVMSSFEQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGTAASTVSPQR 112

Query: 110 NEPAYNNESFPQSPPPKKRWFCCG 133
           NE  YNNE+FPQ  PPKKRWFCCG
Sbjct: 113 NESIYNNETFPQYHPPKKRWFCCG 136

[Close]

BLAST of Cp4.1LG09g09750 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 89.7 bits (221), Expect = 1.9e-18
Identity = 48/86 (55.81%), Postives = 56/86 (65.12%), Query Frame = 0


Query: 55  KFGEWD--------QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVS 114
           +FGE D        +DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G   +   
Sbjct: 4   RFGELDDYMFPFDWRDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGS--P 63

Query: 115 SQSNEPAYNNESFPQSPPPKKRWFCC 133
            +S+E    +     S P  K+W CC
Sbjct: 64  GKSSEGHVKSGGGDPSKPQPKKWLCC 87

[Close]

BLAST of Cp4.1LG09g09750 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 87.4 bits (215), Expect = 9.3e-18
Identity = 46/76 (60.53%), Postives = 57/76 (75.00%), Query Frame = 0


Query: 61  QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKT---TGSVAN-MVSSQSNEPA-YN 120
           ++KG+PLPKFGEWDVNNPASAEGFTVIF+KA DEKKT   +G+  N +VS Q N+ +  N
Sbjct: 3   ENKGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSLVSPQRNQNSDQN 62

Query: 121 NESFPQSPPPKKRWFC 132
           N    Q+P  K +WFC
Sbjct: 63  NNHSSQNPKAKNKWFC 78

[Close]

BLAST of Cp4.1LG09g09750 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 86.7 bits (213), Expect = 1.6e-17
Identity = 45/71 (63.38%), Postives = 49/71 (69.01%), Query Frame = 0


Query: 62  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQ 121
           DKGRPLPKFGEWDVN+P+SAEGFTVIFNKAR+EKK  G      S   +EP YN      
Sbjct: 3   DKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGG---KSDSPGKDEPGYNKNGEVL 62

Query: 122 SPPPKKRWFCC 133
             P KK WFCC
Sbjct: 63  EKPAKK-WFCC 69

[Close]

BLAST of Cp4.1LG09g09750 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15
Identity = 46/82 (56.10%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 55  KFGEWD--------QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVS 114
           +FGE D        +DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G   +   
Sbjct: 4   RFGELDDYMFPFDWRDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGK 63

Query: 115 SQSNEPAYNNESFPQSPPPKKR 129
           S S     +    P  P P K+
Sbjct: 64  S-SEGHVKSGGGDPSKPQPVKK 84

[Close]

BLAST of Cp4.1LG09g09750 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 78.6 bits (192), Expect = 4.3e-15
Identity = 42/67 (62.69%), Postives = 46/67 (68.66%), Query Frame = 0


Query: 62  DKGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTTGSVANMVSSQSNEPAYNNESFPQ 121
           DKGRPLPKFGEWDVN+PASAEGFTVIFNKARDEKKT G   +   S S     +    P 
Sbjct: 3   DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKS-SEGHVKSGGGDPS 62

Query: 122 SPPPKKR 129
            P P K+
Sbjct: 63  KPQPVKK 68

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g09750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22633	1.0e-16	61.97	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
Q8GYN5	3.6e-06	43.24	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]

BLAST of Cp4.1LG09g09750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954832.1	1.56e-47	100.00	RPM1-interacting protein 4-like [Cucurbita moschata] >XP_023542808.1 RPM1-intera...	[more]
XP_022994173.1	2.59e-46	98.63	RPM1-interacting protein 4-like [Cucurbita maxima]	[more]
XP_008439256.1	4.55e-40	83.56	PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo]	[more]
XP_008439265.1	2.55e-39	83.33	PREDICTED: RPM1-interacting protein 4 isoform X2 [Cucumis melo]	[more]
XP_038894676.1	3.73e-39	83.56	protein NOI4 isoform X1 [Benincasa hispida]	[more]

BLAST of Cp4.1LG09g09750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GRZ4	7.56e-48	100.00	RPM1-interacting protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111456977 PE...	[more]
A0A6J1K4F5	1.25e-46	98.63	RPM1-interacting protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111489992 PE=4...	[more]
A0A1S3AZ04	2.20e-40	83.56	RPM1-interacting protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484092 PE...	[more]
A0A1S3AYE6	1.24e-39	83.33	RPM1-interacting protein 4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484092 PE...	[more]
A0A6J1C6I4	7.70e-39	75.00	uncharacterized protein LOC111008714 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Cp4.1LG09g09750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55850.3	1.9e-18	55.81	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G63270.1	9.3e-18	60.53	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G04410.1	1.6e-17	63.38	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	1.1e-15	56.10	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.1	4.3e-15	62.69	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 48..61 e-value: 7.8E-5 score: 21.9 coord: 3..19 e-value: 8.2E-6 score: 25.1 coord: 62..97 e-value: 8.9E-24 score: 82.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..133
None	No IPR available	PANTHER	PTHR33159:SF69	RPM1-INTERACTING PROTEIN 4-LIKE	coord: 61..132
None	No IPR available	PANTHER	PTHR33159:SF69	RPM1-INTERACTING PROTEIN 4-LIKE	coord: 2..19 coord: 46..60
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 61..132 coord: 2..19 coord: 46..60

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g09750.1	Cp4.1LG09g09750.1	mRNA