Cp4.1LG09g09010 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g09010
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Patatin
Location	Cp4.1LG09: 8187590 .. 8196001 (+)
RNA-Seq Expression	Cp4.1LG09g09010
Synteny	Cp4.1LG09g09010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAAGGAGATGGCTTAGACTCAAAGCAAGCAATCCCAGGACCCCAAAAAGCCTCTTTGAATTTACATTATAAACCCAGCAGCACCACATTCTGGGAATCTAGTGACAAAATGGCTGCTACTGTAACTGCTCCTGTTGCCATCGGAACTCGAGGCACCGTGGGATCGCTCGTCAAGAACGAAATTGATTATTTTGCCAAGTTTGAGCTTGAAAGATGCAGCAGCAGCAGCAGCTCACATAGGACCCAAAGACCTGATATGGCTTCTTCTAGCTGCAGCAGCTCCCCTCCCACTTTCTGGCAGTCTATAATGTCGTGGCGAAGGAAGAAGAAGCGAACCGGGATTTGTTTTGTCCCGAAAATGAATAGGATTTCTGGGTTCGGTTACACGATCCTTCGGAATGACTTCCACAGCTTCCACATGTAGATGAGGCTTCATAATCCTCAGAATATTGGACTCAAGGGATTTGCAAGAGAAGCTACCAAGCAGCTTCCTGCTGCTGATGCTTGTTAGGATTTGTGTTTCCTAATTCTAAAGGAAACTTCCTAGGATCCCATCCAGACAGGAACAAATTAGCAGTTTCAACCTTCAAGGTAATCCAGTTTTGGAGAAAATGTTCAACTTTTCTATAGGGTTTGTTCCTGCAATTGTATGTAATATGAGTTTTGAAAATATATGAAGTTTTTCGATAATGTTGTATTCACTACTCATCCCACCCACCCCGAAGTCTAAATGTATAAGGATGAACATGTGAAATCACACGTTGGTTAGAGAGAGGAATAAAATATTCCTTATAAGGATGTGGAAACCTCTCCCTAACAGACGCATTCTAAAAACCGTGAAGCTAACGGCAATACGTAAGGGGTCAAAGCAAACAATATCTGCTTGCGGTTGACTTAGGACTATTACAAATGGTATCAAAGCTCAACAATGGGTGGTGTGCNACTTCAACACCTTATCGTAAAAAGCAAAAGTATGGACACCTAACACAGTCGAGGAAAGCATCAATTGGGTGGGTATGGGTTCATGAAGGGTGTACAACAAATCTTCCCAAAATAAATAAACAAACCACTTTTTTATTTTATAGCATCCATCTTAATTTTCTATTTAAAAAATGGTTATATGGTTCTCACAAAATGAAACATAAAAGGCACAACCAACAAATCATGATCTTTTTGTTATAATTGCTGTTCTTCTTTGAAACATAATAGAGTTTTTTAAATACCATTTTTCAGAAAGTATAGCCTGGATTTAAGTATTTTATTCAATATAAAGCCATATTATTTATTTTAAATAAATCCTTCCTTGAGAAATTATTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANCTTAACGGTCAAAGCGAACCCTTTCATTCCGAATTAAAGAATTCGGAATGAATCAAATCTCCCCAAGTAGGATTCGAACCTACGACCAATCGGTTAACAGCCGACCGCTCTACCACTGAGCTACTGAGGAACAACGGTAAATTAGGTTTCAGAGAATTCAATTCCCGTTCTCAACCCATGACCAATATGAGCTCGAGGTTTCCTTCGTAACTCCCGGAACTTCTTCGTAGTGGCTCCGTTCCATGCCTCATTTCATAGAGAACCTCAAAGTGGCTCTATTTCATTATATTCCATCCATATCCCAATTCCATTCATTTAATATCCCTGTGGTGTCATTGAGATAAGAGATGTCGTTTCTAGTCTATCTGTTTCTATTTCTATATATATGGAAAGTGAAAAAATTATCATATATATAATAATCCAGAAATTGCAATAGAAAAGAAAAAGGGAGGTTTGTGATGATTTTAAAATCTTTTATACTAGGTAATCTAGTATCCTTATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAACCGAGAAGAAAGTATCAGCAACAACAAGTTTTATTACGAGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAATTTGGGTAGACCTTATACAATAACTGTCCTAGCTCTACCGTATCTCTTGTTTCATTTCTTCTGGAATCAATCACAAACACTTTTTTTATTATAGATCTACTACCTCAGTCATTATGGATTAATCTTAGCATTTAATGTGTATTTCTGAATAATCTCATTTTTCAATTATTCAACTATTTCATTTTGTTTTCTATATTTCGATGCAACAACAAGACGTTATTTGTGGTATAAGGATTTTCAGAAAAACCAAAAACAAAGTCATGAGAATGGAGGGTCGTGATTCTTAACGAACAATCACGAACATATGAGAATACGTTATTTATGGTAAGTGGGCAGCAAAAGGAGTAGAAAAGGTGTGATAATATCACGAGGGACAGGAAGCACTAAGATGCTTCTTCGAAGCATTCAGAATGAATATTATATCAAAAGCTCAGGCTGATGCTTGCTTTCTCTTTCAAAGCATGGCTTTATATAAAGATCAAAAAGGAGATGGCTTAGACTCAAAGCAAGCAATCCCAGGACCCCAAAAAGCCTCTTTGAATTTACATTATAAACCCAGCAGCACCACATTCTGGGAATCTAGTGACAAAATGGCTGCTACTGTAACTGCTCCTGTTGCCATCGGAACTCGAGGCACCGTGGGATCGCTCGTCAAGAACGAAATTGATTATTTTGCCAAGTTTGAGCTTGAAAGATGCAGCAGCAGCAGCAGCTCACATAGGACCCAAAGACCTGATATGGCTTCTTCTAGCTGCAGCAGCTCCCCTCCCACTTTCTGGCAGTCTATAATGTCGTGGCGAAGGAAGAAGAAGCGAACCGGGATTTGTTTTGTCCCGAAAATGAATAGGATTTCTGGGTTCGGTTACACGATCCTTCGGAATGACTTCCACAGCTTCCACATGTAGATGAGGCTTCATAATCCTCAGAATATTGGACTCAAGGGATTTGCAAGAGAAGCTACCAAGCAGCTTCCTGCTGCTGATGCTTGTTAGGATTTGTGTTTCCTAATTCTAAAGGAAACTTCCTAGGATCCCATCCAGACAGGAACAAATTAGCAGTTTCAACCTTCAAGGTAATCCAGTTTTGGAGAAAATGTTCAACTTTTCTATAGGGTTTGTTCCTGCAATTGTATGTAATATGAGTTTTGAAAATATATGAAGTTTTTCGATAATGTTGTATTCACTACTCATCCCACCCACCCCGAAGTCTAAATGTATAAGGATGAACATGTGAAATCACACGTTGGTTAGAGAGAGGAATAAAATATTCCTTATAAGGATGTGGAAACCTCTCCCTAACAGACGCATTCTAAAAACCGTGAAGCTAACGGCAATACGTAAGGGGTCAAAGCAAACAATATCTGCTTGCGGTTGACTTAGGACTATTACAAATGGTATCAAAGCTCAACAATGGGTGGTGTGCCAGTGAGGACGCTGGACCTCAAAGGGAGGTGGATTGTGAGATCCCAGGTCGGTTGGAGAGGAAAACGAAGTNTATAGCCTGGATTTAAGTATTTTATTCAATATAAAGCCATATTATTTATTTTAAATAAATCCTTCCTTGAGAAATTATTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANGTATTCCTCATAAATGTGTGGAAACCTCTCCCTAACAGAGGCATTCTAAAAACCGTGAGGCTGACGGCAATACGTAATGGGTCAAAGCAAACAATATCTGCTCGTGGTTGACTTATGACTATTACAAATGGTATCAAAGCTCAACAATGGGTGGTGTGCNCCGGTTAAGAGTTTTTCACCATCGGGTGTTAAAAAGCAAACAAGTTCTTTAATCTACATTTACTGATCAATCTATCGTTATTTTGTTTATATTTGATAGATTTCTTTATGGTGCGACAAAAATGCGGATCCACCTTTGTGTCAATATCGAATGTTGAGGATTATTGGGAGAGAGTCCCACATTGTCGTTAATCAAAGAAATGATTGTGAATTTATAAGAAAAGAATTCATTTCTGGTCGGGCTCTATTATGGATTTCTGACTACATTCTCCATGGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTATCTTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACTACCAGAAACTCAATGCGTAATCTTAGCATTCAATGTGTATTCCTGAATAATCTCATTTTTCAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGTCAGATTAGTCAACATTTCTATGTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGGTTGGTTAATTGGTCACATTTTATTCATGAAATGGGTTGGATTGATATTAGTCTGGATACAGCAAAATAATTCTATTAGATCTAATAAGTACCTTGTGTCAGAATTCAGAAATTCTATGGCTCGAATCTTTAGTATTCTCTTATTTATTACCTGTGTCTACTATTTAGGCAGAATACCGTCACCCATTCTTACTAAGAAACTGAAAGAAACGGAGGGGACTAAACAGGAACAAGAGGGATCCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAGAGATCCGAGTGAATGGAAAGGAAAAAACAAAGGATGAATTCCACTTTAAAAGGACACGCTATCAAAAGATAAAAAGACCTGTTTATGAAACTTCTTACCCTCCGGATGGAAATAAAGAAAATGACAAAATGCTGTTAGATTNGAAAAACCAAAAACAAAGTCATGAGAATGGAGGGTCGTGATTCTTAACGAACAATCACGAACATATGAGAATACGTTATTTATGGTAAGTGGGCAGCAAAAGGAGTAGAAAAGGTGTGATAATATCACGAGGGACAGGAAGCACTAAGATGCTTCTTCGAAGCATTCAGAATGAATATTATATCAAAAGCTCAGGCTGATGCTTGCTTTCTCTTTCAAAGCATGGCTTTATATAAAGATCAAAAAGGAGATGGCTTAGACTCAAAGCAAGCAATCCCAGGACCCCAAAAAGCCTCTTTGAATTTACATTATAAACCCAGCAGCACCACATTCTGGGAATCTAGTGACAAAATGGCTGCTACTGTAACTGCTCCTGTTGCCATCGGAACTCGAGGCACCGTGGGATCGCTCGTCAAGAACGAAATTGATTATTTTGCCAAGTTTGAGCTTGAAAGATGCAGCAGCAGCAGCAGCTCACATAGGACCCAAAGACCTGATATGGCTTCTTCTAGCTGCAGCAGCTCCCCTCCCACTTTCTGGCAGTCTATAATGTCGTGGCGAAGGAAGAAGAAGCGAACCGGGATTTGTTTTGTCCCGAAAATGAATAGGATTTCTGGGTTCGGTTACACGATCCTTCGGAATGACTTCCACAGCTTCCACATGTAGATGAGGCTTCATAATCCTCAGAATATTGGACTCAAGGGATTTGCAAGAGAAGCTACCAAGCAGCTTCCTGCTGCTGATGCTTGTTAGGATTTGTGTTTCCTAATTCTAAAGGAAACTTCCTAGGATCCCATCCAGACAGGAACAAATTAGCAGTTTCAACCTTCAAGGTAATCCAGTTTTGGAGAAAATGTTCAACTTTTCTATAGGGTTTGTTCCTGCAATTGTATGTAATATGAGTTTTGAAAATATATGAAGTTTTTCGATAATGTTGTATTCACTACTCATCCCACCCACCCCGAAGTCTAAATGTATAAGGATGAACATGTGAAATCACACGTTGGTTAGAGAGAGGAATAAAATATTCCTTATAAGGATGTGGAAACCTCTCCCTAACAGACGCATTCTAAAAACCGTGAAGCTAACGGCAATACGTAAGGGGTCAAAGCAAACAATATCTGCTTGCGGTTGACTTAGGACTATTACAAATGGTATCAAAGCTCAACAATGGGTGGTGTGCCAGTGAGGACGCTGGACCTCAAAGGGAGGTGGATTGTGAGATCCCAGGTCGGTTGGAGAGGAAAACGAAGTATTCCTCATAAATGTGTGGAAACCTCTCCCTAACAGAGGCATTCTAAAAACCGTGAGGCTGACGGCAATACGTAATGGGTCAAAGCAAACAATATCTGCTCGTGGTTGACTTATGACTATTACAAATGGTATCAAAGCTCAACAATGGGTGGTGTGCCAGTGAGGACGCTAGACCTCAAAGGGAGGTAGATTGTGAGATCCCAGGTCGGTTGGAGAGGAAAACGAAATATTCCTCATAAATGTGTGGAAACCTCTCCTTAACGGACGCATTCTAAACACTGTGAGGCTGACGGCGATACGTAATGGGTCAAAGCAAACAATATCTACTCACGGTTGACTTAGGACTATTACAAATGGTATCAAAGCTCAACAACGGGCGGTGTGCCAGTGAGAACGCTGGACCTCAAAGGGAGATGGATTGTGAGATCCAGGTCGGTTGGAGAGGAAAACAAAGTATTCCTCATAAATGTGTGGAAACCTCTCCCTAACAAACGCGTTTTAAAAACTGTGAGGCTGACGGTGATACTTAACGGGTCAAAGTGGACAAATTATGAACTTAGAACCACCACAAACGAAAAACTAATGTCAAGTTTCTCACTTTATTGACATACAAATTGCTTAAAAACAATCTGGGTTTCCATCAATACATAAAGTACTAACCTAACAGGAGCGGACTCATTCAACAAAAGCATTACAAATTTCAACCAGCGCAAAAGCTAGAACATTAAACTTGACAATGGAATTCCTCGTCTGTAGAACAAGAACAAAATGATCAGCACAGCCACTCAGAAGTGGACTTAACTGCAAAGCCAATATAAAACAATTAGCTGTACCTATGTAAAACATATGCAGAGGGTGATTAGCTCAAGCCAAGAAAATGGCGCATCCTCTTGTATTTCCCTGGTGGTTGCAGAGCATCCCAGAATTTCCTCACTGAGGCAATCCAGCTTCAATTTCATTCCACGTTTCAACATTCTTAGAGAACCTCTCTTTGATTTGCCCAATGAGTTGCTTTGCCTCATCGACCTTCGAAATGCTAACAAGCCCATCAACAAGAGACTTCATTGTAGTAATATTTGGAAACCAACCCTTCTCCATGCTTTCCCCACAGAGCTTGAATGCTGTTTCATAATCTCCTCCTCGACAAAGAAAGTAAATCAAAGTGAAATAGCAATCACTATCCGGTTGGCAACCGCTATTGATCATTCTCTTGAAAAGGGTCTTAGCTTCATCGAGATTTCCTTCCTTGCAAAACCCATGAATCAATTCACAATATGTAACAGAGTTTGGTTTCATACCTCTCGACAACATCCCATCAAACAAAGCCTTCGCCTCCGATGATCTCTTCAATTTACACAGACTCTGTATCCTTGCATTATATGTACTAACTCCACGCCAAACGCCATATTTTTCCATCAATTTTATGACCTTCTCAACATCCTCGTACTTCTCTTCCTTGTAGCATCCAGCAAGCCAGTTCGCAAAAGTGGTTGCATTTGGTTTGATATCCTTCCTGTCCATCTCCGCCAGAATCGAATACACTGCACTAGACGAACCCGACTCTGAAAACGCCTTGATCACTCTGTTATACGTATCCAGATCTGGTTCGATTCCATAAATCTTAGGAAACTCCATAAAAACTCGCTTCAGTTCCTTGTAATCCTTAGCTAAATTGCATGCAAATAGCAATGCGTTAAGCGATTTAACCGAGTGACACACGCCCAGTTCGCCAATTTGCTTGAAAGTGCTGATAGCATGATCAAGCATATTGGCCTGGCCATAGAGAACAATAGCATGGCAAGCGAAACGCTCGTTTTTCAAGTCGGGACGAGATTTCAATTCCTCGAGGAACCGGCGAATCCCATCGAAATGCTTGGACTCTGAAAGCTTGGAAATAGCAACAGAGAAAGCGATGCGATCGAGATGTGATTCTGGAGTGAGAGTAGCAGCTCGGCAAATATCAATTATACGCTCAGGATTGTCCTCAGATTTCAGTAGAGACAGTGCGGCCCTCGATTTCTGTTTCGCGGACAAAGGATTGGTGGAATCCGGGGAAAGGATTGTCGAGAGAGAACGG

mRNA sequence

CAAAAAGGAGATGGCTTAGACTCAAAGCAAGCAATCCCAGGACCCCAAAAAGCCTCTTTGAATTTACATTATAAACCCAGCAGCACCACATTCTGGGAATCTAGTGACAAAATGGCTGCTACTGTAACTGCTCCTGTTGCCATCGGAACTCGAGGCACCGTGGGATCGCTCGTCAAGAACGAAATTGATTATTTTGCCAAGTTTGAGCTTGAAAGATGCAGCAGCAGCAGCAGCTCACATAGGACCCAAAGACCTGATATGGCTTCTTCTAGCTGCAGCAGCTCCCCTCCCACTTTCTGGCAGTCTATAATGTCGTGGCGAAGGAAGAAGAAGCGAACCGGGATTTGTTTTGTCCCGAAAATGAATAGGATTTCTGGGTTCGGTTACACGATCCTTCGGAATGACTTCCACAGCTTCCACATCAGCACCACATTCTGGGAATCTAGTGACAAAATGGCTGCTACTGTAACTGCTCCTGTTGCCATCGGAACTCGAGGCACCGTGGGATCGCTCGTCAAGAACGAAATTGATTATTTTGCCAAGTTTGAGCTTGAAAGATGCAGCAGCAGCAGCAGCTCACATAGGACCCAAAGACCTGATATGGCTTCTTCTAGCTGCAGCAGCTCCCCTCCCACTTTCTGGCAGTCTATAATGTCGTGGCGAAGGAAGAAGAAGCGAACCGGGATTTGTTTTGTCCCGAAAATGAATAGGATTTCTGGGTTCGGTTACACGATCCTTCGGAATGACTTCCACAGCTTCCACATCAGCACCACATTCTGGGAATCTAGTGACAAAATGGCTGCTACTGTAACTGCTCCTGTTGCCATCGGAACTCGAGGCACCGTGGGATCGCTCGTCAAGAACGAAATTGATTATTTTGCCAAGTTTGAGCTTGAAAGATGCAGCAGCAGCAGCAGCTCACATAGGACCCAAAGACCTGATATGGCTTCTTCTAGCTGCAGCAGCTCCCCTCCCACTTTCTGGCAGTCTATAATGTCGTGGCGAAGGAAGAAGAAGCGAACCGGGATTTGTTTTGTCCCGAAAATGAATAGGATTTCTGGGTTCGGTTACACGATCCTTCGGAATGACTTCCACAGCTTCCACATGAAACTTCCTAGGATCCCATCCAGACAGGAACAAATTAGCAGTTTCAACCTTCAAGGTAATCCAGTTTTGGAGAAAATGTTCAACTTTTCTATAGGGTTTGTTCCTGCAATTCATCCAGCAAGCCAGTTCGCAAAAGTGGTTGCATTTGGTTTGATATCCTTCCTGTCCATCTCCGCCAGAATCGAATACACTGCACTAGACGAACCCGACTCTGAAAACGCCTTGATCACTCTGTTATACAGAACAATAGCATGGCAAGCGAAACGCTCGTTTTTCAAGTCGGGACGAGATTTCAATTCCTCGAGGAACCGGCGAATCCCATCGAAATGCTTGGACTCTGAAAGCTTGGAAATAGCAACAGAGAAAGCGATGCGATCGAGATGTGATTCTGGAGTGAGAGTAGCAGCTCGGCAAATATCAATTATACGCTCAGGATTGTCCTCAGATTTCAGTAGAGACAGTGCGGCCCTCGATTTCTGTTTCGCGGACAAAGGATTGGTGGAATCCGGGGAAAGGATTGTCGAGAGAGAACGG

Coding sequence (CDS)

CAAAAAGGAGATGGCTTAGACTCAAAGCAAGCAATCCCAGGACCCCAAAAAGCCTCTTTGAATTTACATTATAAACCCAGCAGCACCACATTCTGGGAATCTAGTGACAAAATGGCTGCTACTGTAACTGCTCCTGTTGCCATCGGAACTCGAGGCACCGTGGGATCGCTCGTCAAGAACGAAATTGATTATTTTGCCAAGTTTGAGCTTGAAAGATGCAGCAGCAGCAGCAGCTCACATAGGACCCAAAGACCTGATATGGCTTCTTCTAGCTGCAGCAGCTCCCCTCCCACTTTCTGGCAGTCTATAATGTCGTGGCGAAGGAAGAAGAAGCGAACCGGGATTTGTTTTGTCCCGAAAATGAATAGGATTTCTGGGTTCGGTTACACGATCCTTCGGAATGACTTCCACAGCTTCCACATCAGCACCACATTCTGGGAATCTAGTGACAAAATGGCTGCTACTGTAACTGCTCCTGTTGCCATCGGAACTCGAGGCACCGTGGGATCGCTCGTCAAGAACGAAATTGATTATTTTGCCAAGTTTGAGCTTGAAAGATGCAGCAGCAGCAGCAGCTCACATAGGACCCAAAGACCTGATATGGCTTCTTCTAGCTGCAGCAGCTCCCCTCCCACTTTCTGGCAGTCTATAATGTCGTGGCGAAGGAAGAAGAAGCGAACCGGGATTTGTTTTGTCCCGAAAATGAATAGGATTTCTGGGTTCGGTTACACGATCCTTCGGAATGACTTCCACAGCTTCCACATCAGCACCACATTCTGGGAATCTAGTGACAAAATGGCTGCTACTGTAACTGCTCCTGTTGCCATCGGAACTCGAGGCACCGTGGGATCGCTCGTCAAGAACGAAATTGATTATTTTGCCAAGTTTGAGCTTGAAAGATGCAGCAGCAGCAGCAGCTCACATAGGACCCAAAGACCTGATATGGCTTCTTCTAGCTGCAGCAGCTCCCCTCCCACTTTCTGGCAGTCTATAATGTCGTGGCGAAGGAAGAAGAAGCGAACCGGGATTTGTTTTGTCCCGAAAATGAATAGGATTTCTGGGTTCGGTTACACGATCCTTCGGAATGACTTCCACAGCTTCCACATGAAACTTCCTAGGATCCCATCCAGACAGGAACAAATTAGCAGTTTCAACCTTCAAGGTAATCCAGTTTTGGAGAAAATGTTCAACTTTTCTATAGGGTTTGTTCCTGCAATTCATCCAGCAAGCCAGTTCGCAAAAGTGGTTGCATTTGGTTTGATATCCTTCCTGTCCATCTCCGCCAGAATCGAATACACTGCACTAGACGAACCCGACTCTGAAAACGCCTTGATCACTCTGTTATACAGAACAATAGCATGGCAAGCGAAACGCTCGTTTTTCAAGTCGGGACGAGATTTCAATTCCTCGAGGAACCGGCGAATCCCATCGAAATGCTTGGACTCTGAAAGCTTGGAAATAGCAACAGAGAAAGCGATGCGATCGAGATGTGATTCTGGAGTGAGAGTAGCAGCTCGGCAAATATCAATTATACGCTCAGGATTGTCCTCAGATTTCAGTAGAGACAGTGCGGCCCTCGATTTCTGTTTCGCGGACAAAGGATTGGTGGAATCCGGGGAAAGGATTGTCGAGAGAGAACGG

Protein sequence

QKGDGLDSKQAIPGPQKASLNLHYKPSSTTFWESSDKMAATVTAPVAIGTRGTVGSLVKNEIDYFAKFELERCSSSSSSHRTQRPDMASSSCSSSPPTFWQSIMSWRRKKKRTGICFVPKMNRISGFGYTILRNDFHSFHISTTFWESSDKMAATVTAPVAIGTRGTVGSLVKNEIDYFAKFELERCSSSSSSHRTQRPDMASSSCSSSPPTFWQSIMSWRRKKKRTGICFVPKMNRISGFGYTILRNDFHSFHISTTFWESSDKMAATVTAPVAIGTRGTVGSLVKNEIDYFAKFELERCSSSSSSHRTQRPDMASSSCSSSPPTFWQSIMSWRRKKKRTGICFVPKMNRISGFGYTILRNDFHSFHMKLPRIPSRQEQISSFNLQGNPVLEKMFNFSIGFVPAIHPASQFAKVVAFGLISFLSISARIEYTALDEPDSENALITLLYRTIAWQAKRSFFKSGRDFNSSRNRRIPSKCLDSESLEIATEKAMRSRCDSGVRVAARQISIIRSGLSSDFSRDSAALDFCFADKGLVESGERIVERER

Homology

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BLAST of Cp4.1LG09g09010 vs. NCBI nr
Match: KAG7012374.1 (hypothetical protein SDJN02_25126, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 277 bits (708), Expect = 1.32e-87
Identity = 137/142 (96.48%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   QKGDGLDSKQAIPGPQKASLNLHYKPSSTTFWESSDKMAATVTAPVAIGTRGTVGSLVKN 60
           QKGDGLDSKQAIPGPQKASLNLHYKPSSTTFWES DKMAATVTAPVAIGTRGTVGSLVKN
Sbjct: 7   QKGDGLDSKQAIPGPQKASLNLHYKPSSTTFWESRDKMAATVTAPVAIGTRGTVGSLVKN 66

Query: 61  EIDYFAKFELERC-SSSSSSHRTQRPDMASSSCSSSPPTFWQSIMSWRRKKKRTGICFVP 120
           EIDY+AK ELERC SSSSSSHRTQRPDMASSSCSSSPPTFWQSIMSWRRKKKRTGICFVP
Sbjct: 67  EIDYYAKIELERCCSSSSSSHRTQRPDMASSSCSSSPPTFWQSIMSWRRKKKRTGICFVP 126

Query: 121 KMNRISGFGYTILRNDFHSFHI 141
           KMNRISGFGYTILRNDFHSFH+
Sbjct: 127 KMNRISGFGYTILRNDFHSFHM 148

[Close]

BLAST of Cp4.1LG09g09010 vs. NCBI nr
Match: KAG6573198.1 (hypothetical protein SDJN03_27085, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 277 bits (708), Expect = 2.37e-87
Identity = 137/142 (96.48%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   QKGDGLDSKQAIPGPQKASLNLHYKPSSTTFWESSDKMAATVTAPVAIGTRGTVGSLVKN 60
           QKGDGLDSKQAIPGPQKASLNLHYKPSSTTFWES DKMAATVTAPVAIGTRGTVGSLVKN
Sbjct: 24  QKGDGLDSKQAIPGPQKASLNLHYKPSSTTFWESRDKMAATVTAPVAIGTRGTVGSLVKN 83

Query: 61  EIDYFAKFELERC-SSSSSSHRTQRPDMASSSCSSSPPTFWQSIMSWRRKKKRTGICFVP 120
           EIDY+AK ELERC SSSSSSHRTQRPDMASSSCSSSPPTFWQSIMSWRRKKKRTGICFVP
Sbjct: 84  EIDYYAKIELERCCSSSSSSHRTQRPDMASSSCSSSPPTFWQSIMSWRRKKKRTGICFVP 143

Query: 121 KMNRISGFGYTILRNDFHSFHI 141
           KMNRISGFGYTILRNDFHSFH+
Sbjct: 144 KMNRISGFGYTILRNDFHSFHM 165

[Close]

BLAST of Cp4.1LG09g09010 vs. NCBI nr
Match: KAG7019678.1 (hypothetical protein SDJN02_18641, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159 bits (401), Expect = 7.67e-42
Identity = 95/162 (58.64%), Postives = 107/162 (66.05%), Query Frame = 0


Query: 23  HYKPSSTTFWESSDKMAATVTAPVAIGTRGTVGSLVKNEIDYFAKFELERCSSSSSSHRT 82
           H KPS TTF +S +KMAAT  A VAIGTRGT+GSL+K EIDYFAK ELERCSS SS  R 
Sbjct: 3   HNKPS-TTFCKSHEKMAAT--ASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSS-QRP 62

Query: 83  QRPDMASSSCSSSPPTFWQSIMSWRRKKKRTGICFVPK-------------MNRISGFGY 142
           Q PDMA+S CSS PPTFW S+MSWRRKKKR+   FVPK             MN+ISGF Y
Sbjct: 63  QAPDMATSGCSSLPPTFWHSVMSWRRKKKRSRSRFVPKICSSAFDVSESNQMNKISGFNY 122

Query: 143 TILRNDFHSFHISTTFWESSDKMAATVTAPVAIGTRGTVGSL 171
           TIL+N+FHS H+S    E   K        VA+ T  T  SL
Sbjct: 123 TILQNNFHSLHMSMREREEKGKKQFLWKILVAVSTSLTCTSL 160

[Close]

BLAST of Cp4.1LG09g09010 vs. NCBI nr
Match: KAG6584077.1 (hypothetical protein SDJN03_20009, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144 bits (364), Expect = 2.41e-37
Identity = 79/117 (67.52%), Postives = 87/117 (74.36%), Query Frame = 0


Query: 266 MAATVTAPVAIGTRGTVGSLVKNEIDYFAKFELERCSSSSSSHRTQRPDMASSSCSSSPP 325
           MAAT  A VAIGTRGT+GSL+K EIDYFAK ELERCSS SS  R Q PDMA+S CSSSPP
Sbjct: 1   MAAT--ASVAIGTRGTIGSLIKKEIDYFAKIELERCSSRSS-QRPQAPDMATSGCSSSPP 60

Query: 326 TFWQSIMSWRRKKKRTGICFVPK-------------MNRISGFGYTILRNDFHSFHM 369
           TFW S+MSWRRKKKR+   FVPK             MN+ISGF YTIL+N+FHS HM
Sbjct: 61  TFWHSVMSWRRKKKRSRSRFVPKICSSAFDVSESNQMNKISGFNYTILQNNFHSLHM 114

[Close]

BLAST of Cp4.1LG09g09010 vs. NCBI nr
Match: XP_016898893.1 (PREDICTED: uncharacterized protein LOC103485409 [Cucumis melo])

HSP 1 Score: 135 bits (339), Expect = 8.04e-34
Identity = 75/116 (64.66%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 152 MAATVTAPVAIGTRGTVGSLVKNEIDYFAKFELERCSSSSSSHRTQRPDMASSSCSSSPP 211
           MAAT  APVAIGTRGT+GSL+K EIDYFAK ELE   +S SS R+Q P+MASS C SSPP
Sbjct: 1   MAAT--APVAIGTRGTIGSLIKKEIDYFAKIELE---TSISSQRSQGPEMASSGCRSSPP 60

Query: 212 TFWQSIMSWRRKKKRTGICFVPKM------------NRISGFGYTILRNDFHSFHI 255
           TFWQSIMSWRRKKK T   F+ KM            N+ISG  YTIL+NDFHS H+
Sbjct: 61  TFWQSIMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGLSYTILQNDFHSLHV 111

[Close]

BLAST of Cp4.1LG09g09010 vs. ExPASy TrEMBL
Match: A0A0A0LX43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063600 PE=4 SV=1)

HSP 1 Score: 137 bits (345), Expect = 8.91e-35
Identity = 78/126 (61.90%), Postives = 88/126 (69.84%), Query Frame = 0


Query: 256 STTFWESSDKMAATVTAPVAIGTRGTVGSLVKNEIDYFAKFELERCSSSSSSHRTQRPDM 315
           + TF++S   MAA   APVAIGTRGT+GSLVK EIDYFAK ELE   +S SS R+Q P+M
Sbjct: 7   TNTFYKSHYGMAAI--APVAIGTRGTIGSLVKKEIDYFAKIELE---TSISSQRSQGPEM 66

Query: 316 ASSSCSSSPPTFWQSIMSWRRKKKRTGICFVPKM------------NRISGFGYTILRND 369
           ASS C SSPPTFWQS+MSWRRK K T   FV KM            N+ISG  YTIL+ND
Sbjct: 67  ASSGCRSSPPTFWQSLMSWRRKTKLTSNRFVTKMCSTFDASRSNRMNKISGLSYTILQND 126

[Close]

BLAST of Cp4.1LG09g09010 vs. ExPASy TrEMBL
Match: A0A1S4DSE9 (uncharacterized protein LOC103485409 OS=Cucumis melo OX=3656 GN=LOC103485409 PE=4 SV=1)

HSP 1 Score: 135 bits (339), Expect = 3.89e-34
Identity = 75/116 (64.66%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 152 MAATVTAPVAIGTRGTVGSLVKNEIDYFAKFELERCSSSSSSHRTQRPDMASSSCSSSPP 211
           MAAT  APVAIGTRGT+GSL+K EIDYFAK ELE   +S SS R+Q P+MASS C SSPP
Sbjct: 1   MAAT--APVAIGTRGTIGSLIKKEIDYFAKIELE---TSISSQRSQGPEMASSGCRSSPP 60

Query: 212 TFWQSIMSWRRKKKRTGICFVPKM------------NRISGFGYTILRNDFHSFHI 255
           TFWQSIMSWRRKKK T   F+ KM            N+ISG  YTIL+NDFHS H+
Sbjct: 61  TFWQSIMSWRRKKKLTSNRFITKMCSTFDASRSNRMNKISGLSYTILQNDFHSLHV 111

[Close]

BLAST of Cp4.1LG09g09010 vs. ExPASy TrEMBL
Match: A0A6J1CHB1 (uncharacterized protein LOC111010862 OS=Momordica charantia OX=3673 GN=LOC111010862 PE=4 SV=1)

HSP 1 Score: 132 bits (331), Expect = 7.39e-33
Identity = 77/127 (60.63%), Postives = 88/127 (69.29%), Query Frame = 0


Query: 256 STTFWESSDKMAATVTAPVAIGTRGTVGSLVKNEIDYFAKFELERCSSSSSSHRTQRPDM 315
           STTF +  ++MAAT  APVAIGTRGTVGSLVK EIDYFAK E ERCS +         DM
Sbjct: 7   STTFCKFLEEMAAT--APVAIGTRGTVGSLVKKEIDYFAKIEFERCSGN---------DM 66

Query: 316 ASSSC-SSSPPTFWQSIMSWRRKKKRTGICFVPK------------MNRISGFGYTILRN 369
           ASSS  SSSPPTFW ++MSWRRKKKR G  F+ K            +N+ISGF YTIL+N
Sbjct: 67  ASSSRRSSSPPTFWHTVMSWRRKKKRIGNRFITKICSAFDVSGSNRLNKISGFNYTILQN 122

[Close]

BLAST of Cp4.1LG09g09010 vs. ExPASy TrEMBL
Match: A0A5A7UTL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005900 PE=4 SV=1)

HSP 1 Score: 119 bits (298), Expect = 1.12e-27
Identity = 67/99 (67.68%), Postives = 77/99 (77.78%), Query Frame = 0


Query: 23  HYKPSSTTFWESSDKMAATVTAPVAIGTRGTVGSLVKNEIDYFAKFELERCSSSSSSHRT 82
           H KP++T F++S   MAAT  APVAIGTRGT+GSL+K EIDYFAK ELE   +S SS R+
Sbjct: 3   HNKPNNT-FYKSHYGMAAT--APVAIGTRGTIGSLIKKEIDYFAKIELE---TSISSQRS 62

Query: 83  QRPDMASSSCSSSPPTFWQSIMSWRRKKKRTGICFVPKM 121
           Q P+MASS C SSPPTFWQSIMSWRRKKK T   F+ KM
Sbjct: 63  QGPEMASSGCRSSPPTFWQSIMSWRRKKKLTSNRFITKM 95

[Close]

BLAST of Cp4.1LG09g09010 vs. ExPASy TrEMBL
Match: A0A6J5UJ96 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24734 PE=4 SV=1)

HSP 1 Score: 102 bits (255), Expect = 4.10e-22
Identity = 63/135 (46.67%), Postives = 83/135 (61.48%), Query Frame = 0


Query: 22  LHYKPSSTTFWESSDKMAATVTAPVAIGTRGTVGSLVKNEIDYFAKFELERCSSSSSSHR 81
           + YK SSTT  +  +       AP+AIGTRGTVGSLV+ EI+YF+K EL+R   SSSS +
Sbjct: 1   MQYKASSTTDTKFPETNTMAAPAPIAIGTRGTVGSLVRKEIEYFSKLELDRPGGSSSSRK 60

Query: 82  TQRP--DMASSSCS-SSPPTFWQSIMSWRRKKKRTG------ICFVPK------MNRISG 141
            Q    DM SSSC+ SS P+FW  IM+W+RKK+R+       IC   K      +N I G
Sbjct: 61  PQGQIVDMTSSSCTHSSKPSFWFLIMTWKRKKRRSSRRLLSSICSATKVAETNRLNGIPG 120

[Close]

BLAST of Cp4.1LG09g09010 vs. TAIR 10
Match: AT4G21780.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-10
Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = 0


Query: 42  VTAPVAIGTRGTVGSLVKNEIDYF-------AKFELERCSSSSSSHRTQRPDMASSSCSS 101
           + AP+AIGTRGT+GSLV+ EIDYF        +F+  R +S  + +  ++ D +SS   S
Sbjct: 1   MAAPIAIGTRGTIGSLVRKEIDYFKNFSTCHPQFDPRRGNSEENKNTFKQRDRSSSRLGS 60

Query: 102 SPPTFWQSIMSWRRKKKRT---GICFVPKM---------NRISGFGYTILRND 136
                W S   WR+KK++T   G  F P M         NR+ GF Y IL++D
Sbjct: 61  -----WFSKTKWRKKKRQTRGGGGKFFPSMCSAVEVSGENRVPGFNYRILKSD 108

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g09010 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG09g09010 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7012374.1	1.32e-87	96.48	hypothetical protein SDJN02_25126, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6573198.1	2.37e-87	96.48	hypothetical protein SDJN03_27085, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7019678.1	7.67e-42	58.64	hypothetical protein SDJN02_18641, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6584077.1	2.41e-37	67.52	hypothetical protein SDJN03_20009, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_016898893.1	8.04e-34	64.66	PREDICTED: uncharacterized protein LOC103485409 [Cucumis melo]	[more]

BLAST of Cp4.1LG09g09010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX43	8.91e-35	61.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063600 PE=4 SV=1	[more]
A0A1S4DSE9	3.89e-34	64.66	uncharacterized protein LOC103485409 OS=Cucumis melo OX=3656 GN=LOC103485409 PE=...	[more]
A0A6J1CHB1	7.39e-33	60.63	uncharacterized protein LOC111010862 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A5A7UTL1	1.12e-27	67.68	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J5UJ96	4.10e-22	46.67	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24734 PE=4 S...	[more]

BLAST of Cp4.1LG09g09010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21780.1	1.2e-10	38.94	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..325
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..211
None	No IPR available	PANTHER	PTHR35131	EXPRESSED PROTEIN	coord: 24..139 coord: 257..367 coord: 144..253
None	No IPR available	PANTHER	PTHR35131:SF1	EXPRESSED PROTEIN	coord: 24..139 coord: 257..367 coord: 144..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g09010.1	Cp4.1LG09g09010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000162	tryptophan biosynthetic process
cellular_component	GO:0005737	cytoplasm