Cp4.1LG09g08720 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g08720
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	B-box type zinc finger protein
Location	Cp4.1LG09: 8003528 .. 8003881 (-)
RNA-Seq Expression	Cp4.1LG09g08720
Synteny	Cp4.1LG09g08720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACAAGTGTGAGCTTTGCACTTCCAGAGCCAATACATATTGTGAATCCGACCAAGCCAATTTGTGTTGGAGTTGCGACGCCAATGTTCATTCAGCCAACTTCATCGTCGAGAAGCACTCCCGCACGTTGCTATGCCATATTTGCCAATCCCCCACGCCTTGGACTGCCACTGGCCGCAAGCTTTCCCCTACCATCTCCGTTTGTCAATCTTGTCTTAATGCCCAAAATAACGTCGCCGACAACCATCAAGATTCCAGCGATGGATATCGTCGTGACAACGACAACGACGACGACGAGAATCAAGTGGTTCCATTGTCGCCGCCACCGGTTTCGAGCTCGTCAAAATGA

mRNA sequence

ATGAAGAACAAGTGTGAGCTTTGCACTTCCAGAGCCAATACATATTGTGAATCCGACCAAGCCAATTTGTGTTGGAGTTGCGACGCCAATGTTCATTCAGCCAACTTCATCGTCGAGAAGCACTCCCGCACGTTGCTATGCCATATTTGCCAATCCCCCACGCCTTGGACTGCCACTGGCCGCAAGCTTTCCCCTACCATCTCCGTTTGTCAATCTTGTCTTAATGCCCAAAATAACGTCGCCGACAACCATCAAGATTCCAGCGATGGATATCGTCGTGACAACGACAACGACGACGACGAGAATCAAGTGGTTCCATTGTCGCCGCCACCGGTTTCGAGCTCGTCAAAATGA

Coding sequence (CDS)

ATGAAGAACAAGTGTGAGCTTTGCACTTCCAGAGCCAATACATATTGTGAATCCGACCAAGCCAATTTGTGTTGGAGTTGCGACGCCAATGTTCATTCAGCCAACTTCATCGTCGAGAAGCACTCCCGCACGTTGCTATGCCATATTTGCCAATCCCCCACGCCTTGGACTGCCACTGGCCGCAAGCTTTCCCCTACCATCTCCGTTTGTCAATCTTGTCTTAATGCCCAAAATAACGTCGCCGACAACCATCAAGATTCCAGCGATGGATATCGTCGTGACAACGACAACGACGACGACGAGAATCAAGTGGTTCCATTGTCGCCGCCACCGGTTTCGAGCTCGTCAAAATGA

Protein sequence

MKNKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSDGYRRDNDNDDDENQVVPLSPPPVSSSSK

Homology

[Close]

BLAST of Cp4.1LG09g08720 vs. ExPASy Swiss-Prot
Match: Q9SSE5 (Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=COL9 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-10
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 5  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL 64
          C+ C   R+  YC SD A LC SCD +VHSAN + ++HSRTL+C  C +     AT R +
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQ---PATVRCV 64

Query: 65 SPTISVCQSCLNAQNNVADNHQDSS 89
             +S+CQ+C  + +N ++N+  SS
Sbjct: 65 EERVSLCQNCDWSGHNNSNNNNSSS 86

[Close]

BLAST of Cp4.1LG09g08720 vs. ExPASy Swiss-Prot
Match: O23379 (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN=COL11 PE=1 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 6.1e-10
Identity = 32/75 (42.67%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 1  MKNKCELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQ-SPTPWTA 60
          M+ +C+ C T +A  YC+SD A LC +CD NVHSAN + ++H+R+LLC  C   PT    
Sbjct: 1  MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPT---- 60

Query: 61 TGRKLSPTISVCQSC 74
              ++  +S+CQ C
Sbjct: 61 AVHCMNENVSLCQGC 71

[Close]

BLAST of Cp4.1LG09g08720 vs. ExPASy Swiss-Prot
Match: Q9LUA9 (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-09
Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 0


Query: 5  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL 64
          C+ C   R+  YC SD A LC SCD NVHSAN + ++HSRTL+C  C +     A+ R  
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQ---PASVRCS 64

Query: 65 SPTISVCQSC 74
             +S+CQ+C
Sbjct: 65 DERVSLCQNC 71

[Close]

BLAST of Cp4.1LG09g08720 vs. ExPASy Swiss-Prot
Match: Q9LJ44 (Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana OX=3702 GN=COL12 PE=1 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-09
Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = 0


Query: 1  MKNKCELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTAT 60
          M+ KC+ C TS+A  YC+SD A LC +CD +VHSAN +  +H R+L+C  C S     A 
Sbjct: 1  MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQ---PAA 60

Query: 61 GRKLSPTISVCQSCLNAQNNVAD 83
           R L   +S CQ C   ++N ++
Sbjct: 61 IRCLDEKVSYCQGCHWHESNCSE 80

[Close]

BLAST of Cp4.1LG09g08720 vs. ExPASy Swiss-Prot
Match: Q39057 (Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 9.7e-08
Identity = 32/83 (38.55%), Postives = 45/83 (54.22%), Query Frame = 0


Query: 5   CELCTSRANT-YCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQ-SPTPWTATGRK 64
           C+ C S A T YC +D A LC SCDA VHSAN +  +H R  +C  C+ +P  +      
Sbjct: 20  CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADD 79

Query: 65  LSPTISVCQSCLNAQNNVADNHQ 86
            S   + C S +++ N +A  HQ
Sbjct: 80  AS-LCTACDSEVHSANPLARRHQ 101

[Close]

BLAST of Cp4.1LG09g08720 vs. NCBI nr
Match: XP_023542180.1 (zinc finger protein CONSTANS-LIKE 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243 bits (621), Expect = 2.89e-81
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MKNKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60
           MKNKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG
Sbjct: 1   MKNKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60

Query: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSDGYRRDNDNDDDENQVVPLSPPPVSSSSK 117
           RKLSPTISVCQSCLNAQNNVADNHQDSSDGYRRDNDNDDDENQVVPLSPPPVSSSSK
Sbjct: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSDGYRRDNDNDDDENQVVPLSPPPVSSSSK 117

[Close]

BLAST of Cp4.1LG09g08720 vs. NCBI nr
Match: KAG6573228.1 (putative zinc finger protein CONSTANS-LIKE 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012401.1 putative zinc finger protein CONSTANS-LIKE 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 230 bits (586), Expect = 6.12e-76
Identity = 113/117 (96.58%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 1   MKNKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60
           MK KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG
Sbjct: 1   MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60

Query: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSDGYRRDNDNDDDENQVVPLSPPPVSSSSK 117
           RKLSPTISVCQSCLNAQNNVADNHQDSS GYR D DNDDDENQVVPLSPPPVSSSSK
Sbjct: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHD-DNDDDENQVVPLSPPPVSSSSK 116

[Close]

BLAST of Cp4.1LG09g08720 vs. NCBI nr
Match: XP_022994111.1 (zinc finger protein CONSTANS-LIKE 9-like [Cucurbita maxima])

HSP 1 Score: 226 bits (577), Expect = 1.54e-74
Identity = 112/118 (94.92%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MKNKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60
           MK KCELC SRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQS TPWTATG
Sbjct: 1   MKKKCELCASRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSFTPWTATG 60

Query: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSDGYRRDND-NDDDENQVVPLSPPPVSSSSK 117
           RKLSPTISVCQSCLNAQNNVADNHQDSSDGYRRD+D N+DDENQVVPLSPPPVSSSSK
Sbjct: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSDGYRRDDDDNNDDENQVVPLSPPPVSSSSK 118

[Close]

BLAST of Cp4.1LG09g08720 vs. NCBI nr
Match: XP_022954438.1 (zinc finger protein CONSTANS-LIKE 9-like [Cucurbita moschata])

HSP 1 Score: 207 bits (527), Expect = 4.88e-67
Identity = 104/117 (88.89%), Postives = 105/117 (89.74%), Query Frame = 0


Query: 1   MKNKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60
           MK KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG
Sbjct: 1   MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60

Query: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSDGYRRDNDNDDDENQVVPLSPPPVSSSSK 117
           RKLSPTISVCQSCLNAQNNVADNHQDS D        DD+E QVVPLSP PVSSSSK
Sbjct: 61  RKLSPTISVCQSCLNAQNNVADNHQDSGD--------DDEEYQVVPLSPLPVSSSSK 109

[Close]

BLAST of Cp4.1LG09g08720 vs. NCBI nr
Match: XP_038895968.1 (zinc finger protein CONSTANS-LIKE 9-like [Benincasa hispida])

HSP 1 Score: 155 bits (392), Expect = 5.35e-46
Identity = 81/123 (65.85%), Postives = 91/123 (73.98%), Query Frame = 0


Query: 2   KNKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGR 61
           K KCELC  RAN YCESDQA+LCWSCDANVHSANFIVEKHSR LLC ICQSPTPWTATG 
Sbjct: 21  KIKCELCDCRANAYCESDQASLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTATGP 80

Query: 62  KLSPTISVCQSCLNAQNNVA-----DNHQDSSDGYRRDNDN-----DDDENQVVPLSPPP 114
           KL PTIS+CQ C+  QN  +      NH+ S+    RD  +     DD++NQVVP+SPPP
Sbjct: 81  KLGPTISLCQFCVIPQNVGSLQIHHQNHRHSASSSSRDFHHHHHAADDEQNQVVPMSPPP 140

[Close]

BLAST of Cp4.1LG09g08720 vs. ExPASy TrEMBL
Match: A0A6J1JY69 (zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita maxima OX=3661 GN=LOC111489941 PE=4 SV=1)

HSP 1 Score: 226 bits (577), Expect = 7.46e-75
Identity = 112/118 (94.92%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MKNKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60
           MK KCELC SRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQS TPWTATG
Sbjct: 1   MKKKCELCASRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSFTPWTATG 60

Query: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSDGYRRDND-NDDDENQVVPLSPPPVSSSSK 117
           RKLSPTISVCQSCLNAQNNVADNHQDSSDGYRRD+D N+DDENQVVPLSPPPVSSSSK
Sbjct: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSDGYRRDDDDNNDDENQVVPLSPPPVSSSSK 118

[Close]

BLAST of Cp4.1LG09g08720 vs. ExPASy TrEMBL
Match: A0A6J1GR34 (zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita moschata OX=3662 GN=LOC111456702 PE=4 SV=1)

HSP 1 Score: 207 bits (527), Expect = 2.36e-67
Identity = 104/117 (88.89%), Postives = 105/117 (89.74%), Query Frame = 0


Query: 1   MKNKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60
           MK KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG
Sbjct: 1   MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60

Query: 61  RKLSPTISVCQSCLNAQNNVADNHQDSSDGYRRDNDNDDDENQVVPLSPPPVSSSSK 117
           RKLSPTISVCQSCLNAQNNVADNHQDS D        DD+E QVVPLSP PVSSSSK
Sbjct: 61  RKLSPTISVCQSCLNAQNNVADNHQDSGD--------DDEEYQVVPLSPLPVSSSSK 109

[Close]

BLAST of Cp4.1LG09g08720 vs. ExPASy TrEMBL
Match: A0A0A0LS80 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G071810 PE=4 SV=1)

HSP 1 Score: 158 bits (399), Expect = 1.23e-47
Identity = 85/124 (68.55%), Postives = 95/124 (76.61%), Query Frame = 0


Query: 1   MKN-KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTAT 60
           MKN KCELC  RAN YCESD+++LCWSCDANVHSANFIVEKHSR LLC ICQSPTPWTAT
Sbjct: 1   MKNIKCELCDCRANAYCESDESSLCWSCDANVHSANFIVEKHSRILLCQICQSPTPWTAT 60

Query: 61  GRKLSPTISVCQSCLNAQN--NVADNHQD---SSDGYRRDNDN----DDDENQVVPLSPP 114
           G KL PT+S+CQ C+  QN  ++   HQD   S     RD D+    DD+ENQVVPLSPP
Sbjct: 61  GPKLGPTLSLCQLCVLPQNVASLRFRHQDPLHSGSSTTRDFDHHPNEDDEENQVVPLSPP 120

[Close]

BLAST of Cp4.1LG09g08720 vs. ExPASy TrEMBL
Match: A0A5A7UTR2 (B-box zinc finger protein 32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00230 PE=4 SV=1)

HSP 1 Score: 154 bits (389), Expect = 7.89e-46
Identity = 84/127 (66.14%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 1   MKN-KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTAT 60
           MKN KCELC  RAN YCESD+A+LCWSCD+NVHSANFIVEKHSR LLC ICQSPTPWTAT
Sbjct: 19  MKNIKCELCDCRANAYCESDEASLCWSCDSNVHSANFIVEKHSRILLCQICQSPTPWTAT 78

Query: 61  GRKLSPTISVCQSCLNAQN--NVADNHQD---SSDGYRRDNDN------DDDENQVVPLS 115
           G KL PT+S+CQ C+  QN  ++  +HQD   S     RD D+      DD+ENQVVPLS
Sbjct: 79  GPKLGPTLSLCQFCVVPQNVASLQFHHQDHLHSGSSTTRDFDHRHHHSGDDEENQVVPLS 138

[Close]

BLAST of Cp4.1LG09g08720 vs. ExPASy TrEMBL
Match: A0A1S3B4I3 (B-box zinc finger protein 32-like OS=Cucumis melo OX=3656 GN=LOC103485915 PE=4 SV=1)

HSP 1 Score: 154 bits (389), Expect = 7.89e-46
Identity = 84/127 (66.14%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 1   MKN-KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTAT 60
           MKN KCELC  RAN YCESD+A+LCWSCD+NVHSANFIVEKHSR LLC ICQSPTPWTAT
Sbjct: 19  MKNIKCELCDCRANAYCESDEASLCWSCDSNVHSANFIVEKHSRILLCQICQSPTPWTAT 78

Query: 61  GRKLSPTISVCQSCLNAQN--NVADNHQD---SSDGYRRDNDN------DDDENQVVPLS 115
           G KL PT+S+CQ C+  QN  ++  +HQD   S     RD D+      DD+ENQVVPLS
Sbjct: 79  GPKLGPTLSLCQFCVVPQNVASLQFHHQDHLHSGSSTTRDFDHRHHHSGDDEENQVVPLS 138

[Close]

BLAST of Cp4.1LG09g08720 vs. TAIR 10
Match: AT5G54470.1 (B-box type zinc finger family protein )

HSP 1 Score: 115.5 bits (288), Expect = 2.8e-26
Identity = 66/139 (47.48%), Postives = 82/139 (58.99%), Query Frame = 0


Query: 2   KNKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGR 61
           K KCELC   A  YCESDQA+LCW CD  VH ANF+V KH R LLC  CQS TPW A+G 
Sbjct: 3   KKKCELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASGL 62

Query: 62  KLSPTISVCQSCL----NAQNNVADNHQ------------DSSDGYRRDNDNDDD----E 117
            L PT+S+C+SCL    N  +++A   Q            D ++ Y  ++D D++    E
Sbjct: 63  NLGPTVSICESCLARKKNNNSSLAGRDQNLNQEEEIIGCNDGAESYDEESDEDEEEEEVE 122

[Close]

BLAST of Cp4.1LG09g08720 vs. TAIR 10
Match: AT4G27310.1 (B-box type zinc finger family protein )

HSP 1 Score: 111.7 bits (278), Expect = 4.0e-25
Identity = 70/169 (41.42%), Postives = 81/169 (47.93%), Query Frame = 0


Query: 1   MKNKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATG 60
           M  KC+LC   A  YCESDQA+LCW CD  VH ANF+V KH+R LLC  CQS TPW ATG
Sbjct: 1   MGKKCDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATG 60

Query: 61  RKLSPTISVCQSCLNAQN---------------------------NVADNHQDSSDG--- 117
            +L PT SVC+SC+  +N                            + ++H D  D    
Sbjct: 61  LRLGPTFSVCESCVALKNAGGGRGNRVLSENRGQEEVNSFESEEDRIREDHGDGDDAESY 120

[Close]

BLAST of Cp4.1LG09g08720 vs. TAIR 10
Match: AT3G07650.1 (CONSTANS-like 9 )

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 5  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL 64
          C+ C   R+  YC SD A LC SCD +VHSAN + ++HSRTL+C  C +     AT R +
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQ---PATVRCV 64

Query: 65 SPTISVCQSCLNAQNNVADNHQDSS 89
             +S+CQ+C  + +N ++N+  SS
Sbjct: 65 EERVSLCQNCDWSGHNNSNNNNSSS 86

[Close]

BLAST of Cp4.1LG09g08720 vs. TAIR 10
Match: AT3G07650.2 (CONSTANS-like 9 )

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 5  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL 64
          C+ C   R+  YC SD A LC SCD +VHSAN + ++HSRTL+C  C +     AT R +
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQ---PATVRCV 64

Query: 65 SPTISVCQSCLNAQNNVADNHQDSS 89
             +S+CQ+C  + +N ++N+  SS
Sbjct: 65 EERVSLCQNCDWSGHNNSNNNNSSS 86

[Close]

BLAST of Cp4.1LG09g08720 vs. TAIR 10
Match: AT3G07650.3 (CONSTANS-like 9 )

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 5  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKL 64
          C+ C   R+  YC SD A LC SCD +VHSAN + ++HSRTL+C  C +     AT R +
Sbjct: 5  CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQ---PATVRCV 64

Query: 65 SPTISVCQSCLNAQNNVADNHQDSS 89
             +S+CQ+C  + +N ++N+  SS
Sbjct: 65 EERVSLCQNCDWSGHNNSNNNNSSS 86

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g08720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSE5	1.6e-10	42.35	Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana OX=3702 GN=COL9 PE=1...	[more]
O23379	6.1e-10	42.67	Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LUA9	1.4e-09	45.71	Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana OX=3702 GN=COL10 PE...	[more]
Q9LJ44	2.3e-09	42.17	Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana OX=3702 GN=COL12 PE...	[more]
Q39057	9.7e-08	38.55	Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1	[more]

BLAST of Cp4.1LG09g08720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542180.1	2.89e-81	100.00	zinc finger protein CONSTANS-LIKE 9-like [Cucurbita pepo subsp. pepo]	[more]
KAG6573228.1	6.12e-76	96.58	putative zinc finger protein CONSTANS-LIKE 11, partial [Cucurbita argyrosperma s...	[more]
XP_022994111.1	1.54e-74	94.92	zinc finger protein CONSTANS-LIKE 9-like [Cucurbita maxima]	[more]
XP_022954438.1	4.88e-67	88.89	zinc finger protein CONSTANS-LIKE 9-like [Cucurbita moschata]	[more]
XP_038895968.1	5.35e-46	65.85	zinc finger protein CONSTANS-LIKE 9-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG09g08720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JY69	7.46e-75	94.92	zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1GR34	2.36e-67	88.89	zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A0A0LS80	1.23e-47	68.55	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G071810 ...	[more]
A0A5A7UTR2	7.89e-46	66.14	B-box zinc finger protein 32-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3B4I3	7.89e-46	66.14	B-box zinc finger protein 32-like OS=Cucumis melo OX=3656 GN=LOC103485915 PE=4 S...	[more]

BLAST of Cp4.1LG09g08720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54470.1	2.8e-26	47.48	B-box type zinc finger family protein	[more]
AT4G27310.1	4.0e-25	41.42	B-box type zinc finger family protein	[more]
AT3G07650.1	1.1e-11	42.35	CONSTANS-like 9	[more]
AT3G07650.2	1.1e-11	42.35	CONSTANS-like 9	[more]
AT3G07650.3	1.1e-11	42.35	CONSTANS-like 9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 1..46 e-value: 4.4E-6 score: 36.2
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 2..43 e-value: 1.6E-6 score: 28.2
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..46 score: 8.702436
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..117
None	No IPR available	PANTHER	PTHR31717:SF95	B-BOX TYPE ZINC FINGER PROTEIN	coord: 1..116
None	No IPR available	PANTHER	PTHR31717	ZINC FINGER PROTEIN CONSTANS-LIKE 10	coord: 1..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g08720.1	Cp4.1LG09g08720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding