Cp4.1LG09g08570 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g08570
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	TIR domain-containing protein
Location	Cp4.1LG09: 7862330 .. 7862990 (+)
RNA-Seq Expression	Cp4.1LG09g08570
Synteny	Cp4.1LG09g08570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCGTTCTTTTTCGGCCGTGGTTAGGTCGAGAATCCTCAGCCACCAGAGCGACTTTCGATCGATATCACGAGGTTGCGACGTGTTCATAAACCACCGAGGCATCGACACCAAAAAAAACGTAGCTGGATTGCTCTTCGATCATCTTACTCGAATTGGGCTTCGACCCTTTTTAGATAGCAAGAATATGAGACCTGGAGATAAGTTATTCGATGAGATTAAAGAAGGGATCCGGAGTTCTAAGATCGGGATTGCCGTGTTTTCGCCACGGTATTGTGAGTCTTATTATTGTTTGCATGAACTTGCCATGATGGTGGAGAATAAAAAGAAGATCATACCGATCTTCGTCGACGTTCGACCGTCTGAGCTTCATGTTAAGTATAGCCATAGCTGCCCGGAAAATGAGCTGCAGAGATTCAATTGGGCACTTGGAGAAGCCAAATACACCGTTGGACTCACTTTCGACTCCATTAATGGGTAAGCTTTGTTATCAAAAACAAGAAATCTTATTGCATAACGTTGAAGCTAAGATCATTCATGTTTATTATGGCCATTTTTTCAGGGATTGGTCCAAGCTGTTGAGAAAAGCTTCAAACGCCGTCATTGATAATCTGATCGCGAGCGAAGGAGTTCCGATGTCGGATAATCAAGCAGCGTAA

mRNA sequence

ATGCAGCGTTCTTTTTCGGCCGTGGTTAGGTCGAGAATCCTCAGCCACCAGAGCGACTTTCGATCGATATCACGAGGTTGCGACGTGTTCATAAACCACCGAGGCATCGACACCAAAAAAAACGTAGCTGGATTGCTCTTCGATCATCTTACTCGAATTGGGCTTCGACCCTTTTTAGATAGCAAGAATATGAGACCTGGAGATAAGTTATTCGATGAGATTAAAGAAGGGATCCGGAGTTCTAAGATCGGGATTGCCGTGTTTTCGCCACGGTATTGTGAGTCTTATTATTGTTTGCATGAACTTGCCATGATGGTGGAGAATAAAAAGAAGATCATACCGATCTTCGTCGACGTTCGACCGTCTGAGCTTCATGTTAAGTATAGCCATAGCTGCCCGGAAAATGAGCTGCAGAGATTCAATTGGGCACTTGGAGAAGCCAAATACACCGTTGGACTCACTTTCGACTCCATTAATGGGGATTGGTCCAAGCTGTTGAGAAAAGCTTCAAACGCCGTCATTGATAATCTGATCGCGAGCGAAGGAGTTCCGATGTCGGATAATCAAGCAGCGTAA

Coding sequence (CDS)

ATGCAGCGTTCTTTTTCGGCCGTGGTTAGGTCGAGAATCCTCAGCCACCAGAGCGACTTTCGATCGATATCACGAGGTTGCGACGTGTTCATAAACCACCGAGGCATCGACACCAAAAAAAACGTAGCTGGATTGCTCTTCGATCATCTTACTCGAATTGGGCTTCGACCCTTTTTAGATAGCAAGAATATGAGACCTGGAGATAAGTTATTCGATGAGATTAAAGAAGGGATCCGGAGTTCTAAGATCGGGATTGCCGTGTTTTCGCCACGGTATTGTGAGTCTTATTATTGTTTGCATGAACTTGCCATGATGGTGGAGAATAAAAAGAAGATCATACCGATCTTCGTCGACGTTCGACCGTCTGAGCTTCATGTTAAGTATAGCCATAGCTGCCCGGAAAATGAGCTGCAGAGATTCAATTGGGCACTTGGAGAAGCCAAATACACCGTTGGACTCACTTTCGACTCCATTAATGGGGATTGGTCCAAGCTGTTGAGAAAAGCTTCAAACGCCGTCATTGATAATCTGATCGCGAGCGAAGGAGTTCCGATGTCGGATAATCAAGCAGCGTAA

Protein sequence

MQRSFSAVVRSRILSHQSDFRSISRGCDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLDSKNMRPGDKLFDEIKEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDVRPSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIASEGVPMSDNQAA

Homology

[Close]

BLAST of Cp4.1LG09g08570 vs. ExPASy Swiss-Prot
Match: I1GTC2 (TIR-only protein OS=Brachypodium distachyon OX=15368 GN=BRADI_1g24377v3 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.4e-41
Identity = 81/160 (50.62%), Postives = 116/160 (72.50%), Query Frame = 0


Query: 28  DVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLDSKNMRPGDKLFDEIKEGIRSSKIGIAV 87
           +VFINHRG+DTK+ VA LL+D L + GLR FLD+ +MRPGD+L + I   IR   + +A+
Sbjct: 54  EVFINHRGVDTKRTVARLLYDRLAQAGLRGFLDNMSMRPGDRLEERIGSAIRECTVAVAI 113

Query: 88  FSPRYCESYYCLHELAMMVENKKKIIPIFVDVRPSELHVKYSHSCPE----NELQRFNWA 147
           FSP YC+S YCL ELAM+VE++K IIPIF D++PS+L +  + +  E     +L+RF +A
Sbjct: 114 FSPSYCDSEYCLRELAMLVESRKAIIPIFYDIKPSDLLLPQAVADSEVYLPRDLERFKFA 173

Query: 148 LGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIASEGV 184
           L EAK+TVG+T+DS  GD ++L+  A++AV+ N+   E V
Sbjct: 174 LREAKHTVGITYDSATGDMAELVSAAADAVMYNMEKMETV 213

[Close]

BLAST of Cp4.1LG09g08570 vs. ExPASy Swiss-Prot
Match: A0A290U7C4 (Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.5e-15
Identity = 51/180 (28.33%), Postives = 85/180 (47.22%), Query Frame = 0


Query: 25  RGCDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLDSKNMRPGDKLFDEIKEGIRSSKIG 84
           R  DVF++ RG DT+K   G LF+ L   G+  F+D K ++ G  +  E+ + I  S+  
Sbjct: 10  RSYDVFLSFRGEDTRKTFVGHLFNALIEKGIHTFMDDKELKRGKSISSELMKAIGESRFA 69

Query: 85  IAVFSPRYCESYYCLHELAMMVENKKK----IIPIFVDVRPSELH----------VKYSH 144
           + VFS  Y  S +CL EL  ++E  +K    ++P+F DV PS +            K+  
Sbjct: 70  VVVFSKNYASSTWCLEELVKILEIHEKFELIVVPVFYDVDPSTVRKQNGEYAVCFTKFEA 129

Query: 145 SCPENELQRFNW--ALGEAKYTVGLTF-DSINGDWSKLLRKASNAVIDNLIASEGVPMSD 188
           +  ++  +   W  AL +     G    ++ NGD SK +++    + D    S  +   D
Sbjct: 130 NLVDDRDKVLRWREALTKVANISGHDLRNTYNGDESKCIQQILKDIFDKFCFSISITNRD 189

[Close]

BLAST of Cp4.1LG09g08570 vs. ExPASy Swiss-Prot
Match: Q9SSN3 (Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana OX=3702 GN=TIR PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.1e-13
Identity = 48/160 (30.00%), Postives = 76/160 (47.50%), Query Frame = 0


Query: 28  DVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLDSKNMRPGDKLFDEIKEGIRSSKIGIAV 87
           DVF++ RG DT+ N    L+  L R  +R F D K +  G +   E+K  I  S+  + V
Sbjct: 10  DVFLSFRGHDTRHNFISFLYKELVRRSIRTFKDDKELENGQRFSPELKSPIEVSRFAVVV 69

Query: 88  FSPRYCESYYCLHELAMMVENKKK----IIPIFVDVRPSELHVKY----------SHSCP 147
            S  Y  S +CL EL  +++ +KK    ++PIF  V P+  HV++           H+  
Sbjct: 70  VSENYAASSWCLDELVTIMDFEKKGSITVMPIFYGVEPN--HVRWQTGVLAEQFKKHASR 129

Query: 148 ENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAV 174
           E+  +   W      +   L+ D    D SKL+ K +N +
Sbjct: 130 EDPEKVLKWRQALTNF-AQLSGDCSGDDDSKLVDKIANEI 166

[Close]

BLAST of Cp4.1LG09g08570 vs. ExPASy Swiss-Prot
Match: F4KIF3 (Disease resistance-like protein CSA1 OS=Arabidopsis thaliana OX=3702 GN=CSA1 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-11
Identity = 41/97 (42.27%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 29  VFINHRGIDTKKNVAGLLFDHLTRIGLRPFLDSKNMRPGDKLFDEIKEGIRSSKIGIAVF 88
           VFIN RG++ +KN    L   L R G+  F+D+ +   G +L   + E I  S+I +A+F
Sbjct: 19  VFINFRGVELRKNFVSHLEKGLKRKGINAFIDT-DEEMGQEL-SVLLERIEGSRIALAIF 78

Query: 89  SPRYCESYYCLHELAMMVENKKK----IIPIFVDVRP 122
           SPRY ES +CL ELA M E  ++    +IPIF  V+P
Sbjct: 79  SPRYTESKWCLKELAKMKERTEQKELVVIPIFYKVQP 113

[Close]

BLAST of Cp4.1LG09g08570 vs. ExPASy Swiss-Prot
Match: V9M2S5 (Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-10
Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 0


Query: 28  DVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLDSKNMRPGDKLFDEIKEGIRSSKIGIAV 87
           DVF++ RG DT+ N    L+  L R G+R F D + +R G+ +  E+ + I  S+  + V
Sbjct: 25  DVFLSFRGEDTRYNFTDHLYSALGRRGIRTFRDDR-LRRGEAIAPELLKAIEESRSSVIV 84

Query: 88  FSPRYCESYYCLHELAMMVENKK----KIIPIFVDVRPSEL 125
           FS  Y  S +CL EL  ++E +K     + PIF  V PS +
Sbjct: 85  FSENYAHSRWCLDELVKIMECQKDLGHAVFPIFYHVDPSHV 124

[Close]

BLAST of Cp4.1LG09g08570 vs. NCBI nr
Match: XP_023542179.1 (vesicle-associated protein 1-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 388 bits (997), Expect = 4.61e-136
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MQRSFSAVVRSRILSHQSDFRSISRGCDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD 60
           MQRSFSAVVRSRILSHQSDFRSISRGCDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD
Sbjct: 9   MQRSFSAVVRSRILSHQSDFRSISRGCDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD 68

Query: 61  SKNMRPGDKLFDEIKEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDVR 120
           SKNMRPGDKLFDEIKEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDVR
Sbjct: 69  SKNMRPGDKLFDEIKEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDVR 128

Query: 121 PSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS 180
           PSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS
Sbjct: 129 PSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS 188

Query: 181 EGVPMSDNQAA 191
           EGVPMSDNQAA
Sbjct: 189 EGVPMSDNQAA 199

[Close]

BLAST of Cp4.1LG09g08570 vs. NCBI nr
Match: KAG7012416.1 (Toll/interleukin-1 receptor-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377 bits (969), Expect = 6.45e-132
Identity = 186/190 (97.89%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MQRSFSAVVRSRILSHQSDFRSISRGCDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD 60
           MQRSFSAVVRSRILSH SDFRSISRGCDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD
Sbjct: 1   MQRSFSAVVRSRILSHSSDFRSISRGCDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD 60

Query: 61  SKNMRPGDKLFDEIKEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDVR 120
           SKNMRPGDKLF+EI+EGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDVR
Sbjct: 61  SKNMRPGDKLFNEIEEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDVR 120

Query: 121 PSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS 180
           PSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS
Sbjct: 121 PSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS 180

Query: 181 EGVPMSDNQA 190
           EGV MSDNQA
Sbjct: 181 EGVLMSDNQA 190

[Close]

BLAST of Cp4.1LG09g08570 vs. NCBI nr
Match: XP_022954440.1 (vesicle-associated protein 1-4-like [Cucurbita moschata])

HSP 1 Score: 374 bits (959), Expect = 2.87e-130
Identity = 183/190 (96.32%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MQRSFSAVVRSRILSHQSDFRSISRGCDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD 60
           MQRSFSAVVRSRIL+H SDFRSISRGC+VFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD
Sbjct: 9   MQRSFSAVVRSRILNHPSDFRSISRGCNVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD 68

Query: 61  SKNMRPGDKLFDEIKEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDVR 120
           SKNMRPGDKLF+EI+EGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVD+R
Sbjct: 69  SKNMRPGDKLFNEIEEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDIR 128

Query: 121 PSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS 180
           PSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS
Sbjct: 129 PSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS 188

Query: 181 EGVPMSDNQA 190
           EGV MSDNQA
Sbjct: 189 EGVLMSDNQA 198

[Close]

BLAST of Cp4.1LG09g08570 vs. NCBI nr
Match: KAG6573249.1 (TIR-only protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 371 bits (952), Expect = 2.52e-129
Identity = 182/189 (96.30%), Postives = 187/189 (98.94%), Query Frame = 0


Query: 1   MQRSFSAVVRSRILSHQSDFRSISRGCDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD 60
           MQRSFSAVVRSRIL+H SDF+SISRGC+VFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD
Sbjct: 1   MQRSFSAVVRSRILNHPSDFQSISRGCNVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD 60

Query: 61  SKNMRPGDKLFDEIKEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDVR 120
           SKNMRPGDKLF+EI+EGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDVR
Sbjct: 61  SKNMRPGDKLFNEIEEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDVR 120

Query: 121 PSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS 180
           PSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS
Sbjct: 121 PSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS 180

Query: 181 EGVPMSDNQ 189
           EGV MSDNQ
Sbjct: 181 EGVLMSDNQ 189

[Close]

BLAST of Cp4.1LG09g08570 vs. NCBI nr
Match: XP_022994110.1 (vesicle-associated protein 1-4-like [Cucurbita maxima])

HSP 1 Score: 368 bits (945), Expect = 3.91e-128
Identity = 181/191 (94.76%), Postives = 184/191 (96.34%), Query Frame = 0


Query: 1   MQRSFSAVVRSRILSHQSDFRSISRGCDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD 60
           +QRSFS VVRSRILSH SDFRSISR CDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD
Sbjct: 9   LQRSFSPVVRSRILSHPSDFRSISRDCDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD 68

Query: 61  SKNMRPGDKLFDEIKEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDVR 120
           SKNMRPGDKLFDEIKEGIR SKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVD+R
Sbjct: 69  SKNMRPGDKLFDEIKEGIRISKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDIR 128

Query: 121 PSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS 180
           PSELHVKYSHSCPE ELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIA 
Sbjct: 129 PSELHVKYSHSCPETELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAG 188

Query: 181 EGVPMSDNQAA 191
           EGV MS+NQAA
Sbjct: 189 EGVLMSENQAA 199

[Close]

BLAST of Cp4.1LG09g08570 vs. ExPASy TrEMBL
Match: A0A6J1GSF2 (vesicle-associated protein 1-4-like OS=Cucurbita moschata OX=3662 GN=LOC111456704 PE=4 SV=1)

HSP 1 Score: 374 bits (959), Expect = 1.39e-130
Identity = 183/190 (96.32%), Postives = 188/190 (98.95%), Query Frame = 0


Query: 1   MQRSFSAVVRSRILSHQSDFRSISRGCDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD 60
           MQRSFSAVVRSRIL+H SDFRSISRGC+VFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD
Sbjct: 9   MQRSFSAVVRSRILNHPSDFRSISRGCNVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD 68

Query: 61  SKNMRPGDKLFDEIKEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDVR 120
           SKNMRPGDKLF+EI+EGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVD+R
Sbjct: 69  SKNMRPGDKLFNEIEEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDIR 128

Query: 121 PSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS 180
           PSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS
Sbjct: 129 PSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS 188

Query: 181 EGVPMSDNQA 190
           EGV MSDNQA
Sbjct: 189 EGVLMSDNQA 198

[Close]

BLAST of Cp4.1LG09g08570 vs. ExPASy TrEMBL
Match: A0A6J1K0B8 (vesicle-associated protein 1-4-like OS=Cucurbita maxima OX=3661 GN=LOC111489938 PE=4 SV=1)

HSP 1 Score: 368 bits (945), Expect = 1.89e-128
Identity = 181/191 (94.76%), Postives = 184/191 (96.34%), Query Frame = 0


Query: 1   MQRSFSAVVRSRILSHQSDFRSISRGCDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD 60
           +QRSFS VVRSRILSH SDFRSISR CDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD
Sbjct: 9   LQRSFSPVVRSRILSHPSDFRSISRDCDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLD 68

Query: 61  SKNMRPGDKLFDEIKEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDVR 120
           SKNMRPGDKLFDEIKEGIR SKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVD+R
Sbjct: 69  SKNMRPGDKLFDEIKEGIRISKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPIFVDIR 128

Query: 121 PSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS 180
           PSELHVKYSHSCPE ELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIA 
Sbjct: 129 PSELHVKYSHSCPETELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAG 188

Query: 181 EGVPMSDNQAA 191
           EGV MS+NQAA
Sbjct: 189 EGVLMSENQAA 199

[Close]

BLAST of Cp4.1LG09g08570 vs. ExPASy TrEMBL
Match: A0A5D3DRR9 (Disease resistance-like protein CSA1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00490 PE=4 SV=1)

HSP 1 Score: 306 bits (783), Expect = 8.06e-104
Identity = 147/195 (75.38%), Postives = 171/195 (87.69%), Query Frame = 0


Query: 1   MQRSFSAVVR------SRILSHQSDFRSISRGCDVFINHRGIDTKKNVAGLLFDHLTRIG 60
           MQR FS V +      S+ILS ++D RS+SR CDVFINHRG+DTK+N+AGLL DH +RIG
Sbjct: 1   MQRYFSTVAKNYLTSSSKILSRRNDIRSLSRQCDVFINHRGVDTKRNIAGLLHDHFSRIG 60

Query: 61  LRPFLDSKNMRPGDKLFDEIKEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIP 120
           LRPFLDSK+M+PGDKLF EI+EGIRS K+G+AVFSPRYCESY+CLHELA+MVENKKKIIP
Sbjct: 61  LRPFLDSKSMKPGDKLFGEIEEGIRSCKVGLAVFSPRYCESYFCLHELALMVENKKKIIP 120

Query: 121 IFVDVRPSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVI 180
           IFVDVRPS+L V+Y++SCP+ ELQRFNWALGEAKYTVGLTFD++NGDWS+LLRKASNAVI
Sbjct: 121 IFVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVI 180

Query: 181 DNLIASEGV-PMSDN 188
           DNLI  EG   M DN
Sbjct: 181 DNLIVGEGAGEMPDN 195

[Close]

BLAST of Cp4.1LG09g08570 vs. ExPASy TrEMBL
Match: A0A1S3BG53 (disease resistance-like protein CSA1 OS=Cucumis melo OX=3656 GN=LOC103489293 PE=4 SV=1)

HSP 1 Score: 306 bits (783), Expect = 8.06e-104
Identity = 147/195 (75.38%), Postives = 171/195 (87.69%), Query Frame = 0


Query: 1   MQRSFSAVVR------SRILSHQSDFRSISRGCDVFINHRGIDTKKNVAGLLFDHLTRIG 60
           MQR FS V +      S+ILS ++D RS+SR CDVFINHRG+DTK+N+AGLL DH +RIG
Sbjct: 1   MQRYFSTVAKNYLTSSSKILSRRNDIRSLSRQCDVFINHRGVDTKRNIAGLLHDHFSRIG 60

Query: 61  LRPFLDSKNMRPGDKLFDEIKEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIP 120
           LRPFLDSK+M+PGDKLF EI+EGIRS K+G+AVFSPRYCESY+CLHELA+MVENKKKIIP
Sbjct: 61  LRPFLDSKSMKPGDKLFGEIEEGIRSCKVGLAVFSPRYCESYFCLHELALMVENKKKIIP 120

Query: 121 IFVDVRPSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVI 180
           IFVDVRPS+L V+Y++SCP+ ELQRFNWALGEAKYTVGLTFD++NGDWS+LLRKASNAVI
Sbjct: 121 IFVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVI 180

Query: 181 DNLIASEGV-PMSDN 188
           DNLI  EG   M DN
Sbjct: 181 DNLIVGEGAGEMPDN 195

[Close]

BLAST of Cp4.1LG09g08570 vs. ExPASy TrEMBL
Match: A0A0A0LV24 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G073070 PE=4 SV=1)

HSP 1 Score: 295 bits (756), Expect = 1.01e-99
Identity = 144/194 (74.23%), Postives = 167/194 (86.08%), Query Frame = 0


Query: 1   MQRSFSAVVRS-----RILSHQSDFRSISRGCDVFINHRGIDTKKNVAGLLFDHLTRIGL 60
           MQR FS V +S     +ILS +++ RSISR CDVFINHRG DTK+N+AGLL DH +RIGL
Sbjct: 1   MQRYFSTVAKSYLTSSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIGL 60

Query: 61  RPFLDSKNMRPGDKLFDEIKEGIRSSKIGIAVFSPRYCESYYCLHELAMMVENKKKIIPI 120
             FLDSK+M+PGDKLF EI+EGIRS K+GIAVFSPRYCESY+CLHELA+M+ENKKKIIPI
Sbjct: 61  HSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIPI 120

Query: 121 FVDVRPSELHVKYSHSCPENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVID 180
           FVDVRPS+L V+Y++SCP+ ELQRFNWALGEAKYTVGLTFD++NGDWS+LLRKASNAVID
Sbjct: 121 FVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVID 180

Query: 181 NLIASEGV-PMSDN 188
           NLI   G   M DN
Sbjct: 181 NLIVGGGAGEMPDN 194

[Close]

BLAST of Cp4.1LG09g08570 vs. TAIR 10
Match: AT1G61105.1 (Toll-Interleukin-Resistance (TIR) domain family protein )

HSP 1 Score: 208.0 bits (528), Expect = 6.8e-54
Identity = 97/155 (62.58%), Postives = 123/155 (79.35%), Query Frame = 0


Query: 27  CDVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLDSKNMRPGDKLFDEIKEGIRSSKIGIA 86
           CD+FINHRGIDTKK ++GLL+D  TR  L  FLDSK+++PGD+LF EI   I++  +GIA
Sbjct: 29  CDIFINHRGIDTKKTISGLLYDCFTRQRLTAFLDSKSLKPGDRLFVEIDMAIKACGVGIA 88

Query: 87  VFSPRYCESYYCLHELAMMVENKKKIIPIFVDVRPSELHVKYSHSCPENELQRFNWALGE 146
           VFSPRYC+SY+CLHELA++V+NKK++IPIF DV+PSEL VK   + P  E++RF  AL E
Sbjct: 89  VFSPRYCDSYFCLHELALLVKNKKRVIPIFCDVKPSELCVKDDKTRPAAEIRRFQLALEE 148

Query: 147 AKYTVGLTFDSINGDWSKLLRKASNAVIDNLIASE 182
           AKYTVGLTFD+ NGDWS+ L  AS+AV  NL+  E
Sbjct: 149 AKYTVGLTFDTSNGDWSEFLAMASDAVTKNLLEVE 183

[Close]

BLAST of Cp4.1LG09g08570 vs. TAIR 10
Match: AT1G52900.1 (Toll-Interleukin-Resistance (TIR) domain family protein )

HSP 1 Score: 194.9 bits (494), Expect = 5.9e-50
Identity = 87/155 (56.13%), Postives = 120/155 (77.42%), Query Frame = 0


Query: 28  DVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLDSKNMRPGDKLFDEIKEGIRSSKIGIAV 87
           DVFINHRG DTK+N+A LL+D+L    LRPFLDSKNM+PGDKLFD I   I +SK+ + V
Sbjct: 39  DVFINHRGSDTKRNIATLLYDNLKSRNLRPFLDSKNMKPGDKLFDHINNAILTSKVAVTV 98

Query: 88  FSPRYCESYYCLHELAMMVENKKKIIPIFVDVRPSELHVKYSH-SCPENELQRFNWALGE 147
           FSP YC+SY+CLHELA+++E++K++IPIF D++PS+L V     +C ++E+QRF WAL E
Sbjct: 99  FSPNYCDSYFCLHELALIMESRKRVIPIFCDIKPSQLDVMIERVTCSDDEIQRFRWALQE 158

Query: 148 AKYTVGLTFDSINGDWSKLLRKASNAVIDNLIASE 182
           AK  VGLTFDS  G+ S+++  AS+ +++ L+  E
Sbjct: 159 AKDIVGLTFDSYKGNLSEVVTVASDVIVERLVELE 193

[Close]

BLAST of Cp4.1LG09g08570 vs. TAIR 10
Match: AT1G72860.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 84.0 bits (206), Expect = 1.5e-16
Identity = 51/172 (29.65%), Postives = 83/172 (48.26%), Query Frame = 0


Query: 28  DVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLDSKNMRPGDKLFDEIKEGIRSSKIGIAV 87
           DVF++ RG DT+KN+   L   L   G+  F D K +  GD + +EI   I++S   + +
Sbjct: 13  DVFLSFRGEDTRKNIVSHLHKQLVDKGVVTFKDDKKLELGDSISEEISRAIQNSTYALVI 72

Query: 88  FSPRYCESYYCLHELAMMVE----NKKKIIPIFVDVRPSELH--------VKYSHSCPEN 147
            S  Y  S +CL EL M+++    NK K++PIF  V PS +          KY  S   N
Sbjct: 73  LSENYASSSWCLDELRMVMDLHLKNKIKVVPIFYGVDPSHVRHQTGSFTFDKYQDSKMPN 132

Query: 148 ELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIASEGVPMSD 188
           ++  +  AL +     G  F++   D + ++ +    +   L+  + V  SD
Sbjct: 133 KVTTWREALTQIASLAGKDFETCE-DEASMIEEIVKDISKKLLIMQPVDFSD 183

[Close]

BLAST of Cp4.1LG09g08570 vs. TAIR 10
Match: AT5G17680.1 (disease resistance protein (TIR-NBS-LRR class), putative )

HSP 1 Score: 82.4 bits (202), Expect = 4.3e-16
Identity = 53/162 (32.72%), Postives = 86/162 (53.09%), Query Frame = 0


Query: 28  DVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLDSKNMRPGDKLFDEIKEGIRSSKIGIAV 87
           DVF++ RG D +K     LF    R+G++ F D  +++ G  +  E+ + I+ S+  I V
Sbjct: 19  DVFVSFRGEDVRKTFVSHLFCEFDRMGIKAFRDDLDLQRGKSISPELIDAIKGSRFAIVV 78

Query: 88  FSPRYCESYYCLHELAMMVE-NKKKIIPIFVDVRPSELHVK--------YSHSCPENELQ 147
            S  Y  S +CL EL  ++E NK  I+PIF +V PS++  +         SHS  E ++ 
Sbjct: 79  VSRNYAASSWCLDELLKIMECNKDTIVPIFYEVDPSDVRRQRGSFGEDVESHSDKE-KVG 138

Query: 148 RFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAVIDNLIAS 181
           ++  AL +     G   DS N D SKL++K    + D L+++
Sbjct: 139 KWKEALKKLAAISG--EDSRNWDDSKLIKKIVKDISDKLVST 177

[Close]

BLAST of Cp4.1LG09g08570 vs. TAIR 10
Match: AT1G72910.1 (Toll-Interleukin-Resistance (TIR) domain-containing protein )

HSP 1 Score: 79.7 bits (195), Expect = 2.8e-15
Identity = 48/160 (30.00%), Postives = 77/160 (48.12%), Query Frame = 0


Query: 28  DVFINHRGIDTKKNVAGLLFDHLTRIGLRPFLDSKNMRPGDKLFDEIKEGIRSSKIGIAV 87
           DVF++ RG DT++N    L+  L R  +R F D K +  G ++  E+K  I  S+  + V
Sbjct: 10  DVFLSFRGHDTRQNFISFLYKELVRRSIRTFKDDKELENGQRISSELKRTIEVSRFAVVV 69

Query: 88  FSPRYCESYYCLHELAMMVENKKK----IIPIFVDVRPSELHVKY----------SHSCP 147
            S  Y  S +CL EL  +++ +KK    ++PIF  V P+  HV++           H   
Sbjct: 70  VSETYAASSWCLDELVTIMDFEKKGSITVMPIFYGVEPN--HVRWQTGVLAEQFKKHGSR 129

Query: 148 ENELQRFNWALGEAKYTVGLTFDSINGDWSKLLRKASNAV 174
           E+  +   W      +   L+ D    D SKL+ K +N +
Sbjct: 130 EDHEKVLKWRQALTNF-AQLSGDCSGDDDSKLVDKIANEI 166

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g08570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
I1GTC2	6.4e-41	50.63	TIR-only protein OS=Brachypodium distachyon OX=15368 GN=BRADI_1g24377v3 PE=1 SV=...	[more]
A0A290U7C4	3.5e-15	28.33	Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV...	[more]
Q9SSN3	1.1e-13	30.00	Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana OX=3702 GN=TIR ...	[more]
F4KIF3	1.8e-11	42.27	Disease resistance-like protein CSA1 OS=Arabidopsis thaliana OX=3702 GN=CSA1 PE=...	[more]
V9M2S5	1.5e-10	36.63	Disease resistance protein RPV1 OS=Vitis rotundifolia OX=103349 GN=RPV1 PE=1 SV=...	[more]

BLAST of Cp4.1LG09g08570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542179.1	4.61e-136	100.00	vesicle-associated protein 1-4-like [Cucurbita pepo subsp. pepo]	[more]
KAG7012416.1	6.45e-132	97.89	Toll/interleukin-1 receptor-like protein, partial [Cucurbita argyrosperma subsp....	[more]
XP_022954440.1	2.87e-130	96.32	vesicle-associated protein 1-4-like [Cucurbita moschata]	[more]
KAG6573249.1	2.52e-129	96.30	TIR-only protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022994110.1	3.91e-128	94.76	vesicle-associated protein 1-4-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG09g08570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GSF2	1.39e-130	96.32	vesicle-associated protein 1-4-like OS=Cucurbita moschata OX=3662 GN=LOC11145670...	[more]
A0A6J1K0B8	1.89e-128	94.76	vesicle-associated protein 1-4-like OS=Cucurbita maxima OX=3661 GN=LOC111489938 ...	[more]
A0A5D3DRR9	8.06e-104	75.38	Disease resistance-like protein CSA1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BG53	8.06e-104	75.38	disease resistance-like protein CSA1 OS=Cucumis melo OX=3656 GN=LOC103489293 PE=...	[more]
A0A0A0LV24	1.01e-99	74.23	TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G073070 PE=4 SV...	[more]

BLAST of Cp4.1LG09g08570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61105.1	6.8e-54	62.58	Toll-Interleukin-Resistance (TIR) domain family protein	[more]
AT1G52900.1	5.9e-50	56.13	Toll-Interleukin-Resistance (TIR) domain family protein	[more]
AT1G72860.1	1.5e-16	29.65	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT5G17680.1	4.3e-16	32.72	disease resistance protein (TIR-NBS-LRR class), putative	[more]
AT1G72910.1	2.8e-15	30.00	Toll-Interleukin-Resistance (TIR) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	SMART	SM00255	till_3	coord: 26..172 e-value: 1.4E-21 score: 87.7
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF01582	TIR	coord: 28..124 e-value: 8.1E-19 score: 68.1
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROSITE	PS50104	TIR	coord: 25..151 score: 23.80619
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	GENE3D	3.40.50.10140		coord: 2..143 e-value: 5.9E-33 score: 115.6
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	SUPERFAMILY	52200	Toll/Interleukin receptor TIR domain	coord: 18..144
None	No IPR available	PANTHER	PTHR31008	COP1-INTERACTING PROTEIN-RELATED	coord: 19..185
None	No IPR available	PANTHER	PTHR31008:SF19	TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN	coord: 19..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g08570.1	Cp4.1LG09g08570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0003953	NAD+ nucleosidase activity