Cp4.1LG09g06400 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAACTGCATCATCTTGCCTTGCGTTCACTCGCCATCGAAGAACCTTTCCCCCGAGTTAGCTACAGTGGTCGATTCCGCAACTGAACAAGGCAACGACCCTCTTCTCGATGTTGTTCCATGCTTGAAAGAGCTCGAAAATCTTCTGGTTTACTTGAAGACAGCGTACTCGAGTGGAGGAGGAGCAAGGGAGGTGAAAATTGTTGTTACTAGGGAACAGTTTAAGTTGCTGTTGGCAAATGCAAAGAAGATGCAATCTGCATATAGATTGTTGAGCTATAGAGGACCCGGTAGAGGGCGTCGAAAATGGCGGCCGATGCTGTCTGTAATCTCGGAGGAAGAAGAGTAG ATGGGAAACTGCATCATCTTGCCTTGCGTTCACTCGCCATCGAAGAACCTTTCCCCCGAGTTAGCTACAGTGGTCGATTCCGCAACTGAACAAGGCAACGACCCTCTTCTCGATGTTGTTCCATGCTTGAAAGAGCTCGAAAATCTTCTGGTTTACTTGAAGACAGCGTACTCGAGTGGAGGAGGAGCAAGGGAGGTGAAAATTGTTGTTACTAGGGAACAGTTTAAGTTGCTGTTGGCAAATGCAAAGAAGATGCAATCTGCATATAGATTGTTGAGCTATAGAGGACCCGGTAGAGGGCGTCGAAAATGGCGGCCGATGCTGTCTGTAATCTCGGAGGAAGAAGAGTAG ATGGGAAACTGCATCATCTTGCCTTGCGTTCACTCGCCATCGAAGAACCTTTCCCCCGAGTTAGCTACAGTGGTCGATTCCGCAACTGAACAAGGCAACGACCCTCTTCTCGATGTTGTTCCATGCTTGAAAGAGCTCGAAAATCTTCTGGTTTACTTGAAGACAGCGTACTCGAGTGGAGGAGGAGCAAGGGAGGTGAAAATTGTTGTTACTAGGGAACAGTTTAAGTTGCTGTTGGCAAATGCAAAGAAGATGCAATCTGCATATAGATTGTTGAGCTATAGAGGACCCGGTAGAGGGCGTCGAAAATGGCGGCCGATGCTGTCTGTAATCTCGGAGGAAGAAGAGTAG MGNCIILPCVHSPSKNLSPELATVVDSATEQGNDPLLDVVPCLKELENLLVYLKTAYSSGGGAREVKIVVTREQFKLLLANAKKMQSAYRLLSYRGPGRGRRKWRPMLSVISEEEE Homology
BLAST of Cp4.1LG09g06400 vs. NCBI nr
Match: XP_023542404.1 (uncharacterized protein LOC111802317 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 231 bits (590), Expect = 1.23e-74 Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
BLAST of Cp4.1LG09g06400 vs. NCBI nr
Match: KGN64995.1 (hypothetical protein Csa_022837 [Cucumis sativus]) HSP 1 Score: 140 bits (352), Expect = 5.68e-40 Identity = 81/139 (58.27%), Postives = 94/139 (67.63%), Query Frame = 0
BLAST of Cp4.1LG09g06400 vs. NCBI nr
Match: XP_038877793.1 (uncharacterized protein LOC120070018 isoform X1 [Benincasa hispida]) HSP 1 Score: 129 bits (324), Expect = 9.34e-36 Identity = 74/121 (61.16%), Postives = 82/121 (67.77%), Query Frame = 0
BLAST of Cp4.1LG09g06400 vs. NCBI nr
Match: KAA0042344.1 (hypothetical protein E6C27_scaffold795G00420 [Cucumis melo var. makuwa] >TYK15468.1 hypothetical protein E5676_scaffold477G00390 [Cucumis melo var. makuwa]) HSP 1 Score: 123 bits (309), Expect = 2.91e-33 Identity = 73/120 (60.83%), Postives = 81/120 (67.50%), Query Frame = 0
BLAST of Cp4.1LG09g06400 vs. NCBI nr
Match: KAG6583721.1 (hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 115 bits (289), Expect = 1.73e-29 Identity = 67/112 (59.82%), Postives = 74/112 (66.07%), Query Frame = 0
BLAST of Cp4.1LG09g06400 vs. ExPASy TrEMBL
Match: A0A0A0LSY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173150 PE=4 SV=1) HSP 1 Score: 140 bits (352), Expect = 2.75e-40 Identity = 81/139 (58.27%), Postives = 94/139 (67.63%), Query Frame = 0
BLAST of Cp4.1LG09g06400 vs. ExPASy TrEMBL
Match: A0A5D3CW41 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00390 PE=4 SV=1) HSP 1 Score: 123 bits (309), Expect = 1.41e-33 Identity = 73/120 (60.83%), Postives = 81/120 (67.50%), Query Frame = 0
BLAST of Cp4.1LG09g06400 vs. ExPASy TrEMBL
Match: A0A5E4GL56 (PREDICTED: POPTR_0006s01910g OS=Prunus dulcis OX=3755 GN=ALMOND_2B008489 PE=4 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 1.50e-04 Identity = 35/87 (40.23%), Postives = 47/87 (54.02%), Query Frame = 0
BLAST of Cp4.1LG09g06400 vs. ExPASy TrEMBL
Match: A0A251PDS0 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G005300 PE=4 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 1.50e-04 Identity = 35/87 (40.23%), Postives = 47/87 (54.02%), Query Frame = 0
BLAST of Cp4.1LG09g06400 vs. ExPASy TrEMBL
Match: A0A6J5UND5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24534 PE=4 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 2.46e-04 Identity = 32/78 (41.03%), Postives = 43/78 (55.13%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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