Homology
BLAST of Cp4.1LG09g01750 vs. ExPASy Swiss-Prot
Match:
Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)
HSP 1 Score: 295.0 bits (754), Expect = 8.8e-79
Identity = 144/248 (58.06%), Postives = 189/248 (76.21%), Query Frame = 0
Query: 37 LSIQMAISCIPTSQFALSKPKNEFINQPHPLSLFSKCSSLRELKQIQAYTIKTNLHNDIS 96
+S IS ++ K + +N +P+ L SKC+SLREL QIQAY IK+++ D+S
Sbjct: 3 ISSASLISSFSHAETFTKHSKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHI-EDVS 62
Query: 97 VLTKLINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVL 156
+ KLINFCT +PT SSM +A HLF+ M + DIV+FN MARGY+R +P VFSLF ++L
Sbjct: 63 FVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEIL 122
Query: 157 CSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMN 216
G+LPD+YTF SLLKACA +KALEEGRQLHC ++KLGL N+Y+CPTLINMY C D++
Sbjct: 123 EDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVD 182
Query: 217 AARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCA 276
+AR VFD + EPC+V YNA+ITGYAR ++PNEALSLFRE+Q L+P ++T+LS++ SCA
Sbjct: 183 SARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCA 242
Query: 277 LLGALDLG 285
LLG+LDLG
Sbjct: 243 LLGSLDLG 249
BLAST of Cp4.1LG09g01750 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 154.1 bits (388), Expect = 2.4e-36
Identity = 91/285 (31.93%), Postives = 148/285 (51.93%), Query Frame = 0
Query: 41 MAISC----IPTSQF------ALSKPKNEFINQPHPLSLFSKCSSLRELKQIQAYTIKTN 100
M +SC +P+S + + S P + I LSL C +L+ L+ I A IK
Sbjct: 1 MMLSCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIG 60
Query: 101 LHNDISVLTKLINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFS 160
LHN L+KLI FC +P + +A +F + + +++++N M RG+A S+ P
Sbjct: 61 LHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALK 120
Query: 161 LFAQVLCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYA 220
L+ ++ GLLP+ YTF +LK+CA SKA +EG+Q+H +KLG ++Y+ +LI+MY
Sbjct: 121 LYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYV 180
Query: 221 ACNDMNAARGVFDGMEEPCIVSY-------------------------------NAIITG 280
+ A VFD +VSY NA+I+G
Sbjct: 181 QNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISG 240
Query: 281 YARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDLG 285
YA + EAL LF+++ +N+ P + TM++++ +CA G+++LG
Sbjct: 241 YAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
BLAST of Cp4.1LG09g01750 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 144.1 bits (362), Expect = 2.5e-33
Identity = 84/249 (33.73%), Postives = 130/249 (52.21%), Query Frame = 0
Query: 67 LSLFSKCSSLRELKQIQAYTIKTNLHNDISVLTKLINFCTRNPTISSMDHAHHLFDKMLD 126
+S +CS ELKQI A +KT L D +TK ++FC + + + +A +FD
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 127 KDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGLLPDDYTFSSLLKACAGSKALEEGRQL 186
D L+N+M RG++ S+ P L+ ++LCS + YTF SLLKAC+ A EE Q+
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 187 HCFAIKLGLGHNIYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAIITGYARSSQP 246
H KLG +++Y +LIN YA + A +FD + EP VS+N++I GY ++ +
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 247 N-------------------------------EALSLFRELQASNLEPTDVTMLSIIMSC 285
+ EAL LF E+Q S++EP +V++ + + +C
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
BLAST of Cp4.1LG09g01750 vs. ExPASy Swiss-Prot
Match:
P93011 (Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H6 PE=3 SV=1)
HSP 1 Score: 134.0 bits (336), Expect = 2.6e-30
Identity = 69/209 (33.01%), Postives = 120/209 (57.42%), Query Frame = 0
Query: 76 LRELKQIQAYTIKTNLHNDISVLTKLINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIM 135
+++L+Q+ A+ I T S+LTKLI I+ + H LF + D LFN +
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIA---YTHLLFLSVPLPDDFLFNSV 81
Query: 136 ARGYARSNSPYLVFSLFAQVLCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGL 195
+ ++ P + + ++L S + P +YTF+S++K+CA AL G+ +HC A+ G
Sbjct: 82 IKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGF 141
Query: 196 GHNIYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRE 255
G + Y+ L+ Y+ C DM AR VFD M E IV++N++++G+ ++ +EA+ +F +
Sbjct: 142 GLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQ 201
Query: 256 LQASNLEPTDVTMLSIIMSCALLGALDLG 285
++ S EP T +S++ +CA GA+ LG
Sbjct: 202 MRESGFEPDSATFVSLLSACAQTGAVSLG 227
BLAST of Cp4.1LG09g01750 vs. ExPASy Swiss-Prot
Match:
A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)
HSP 1 Score: 134.0 bits (336), Expect = 2.6e-30
Identity = 75/215 (34.88%), Postives = 130/215 (60.47%), Query Frame = 0
Query: 74 SSLRELKQIQAYTIKTNLH-NDISVLTKLINFCTRNPTISSMDHAHHLFDKMLDKDIVLF 133
SS+ +L+QI A++I+ + +D + LI + P+ M +AH +F K ++K I +F
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSK-IEKPINVF 87
Query: 134 --NIMARGYARSNSPYLVFSLFAQVLCSGLL-PDDYTFSSLLKACAGSKALEEGRQLHCF 193
N + RGYA + FSL+ ++ SGL+ PD +T+ L+KA + G +H
Sbjct: 88 IWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 147
Query: 194 AIKLGLGHNIYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAIITGYARSSQPNEA 253
I+ G G IY+ +L+++YA C D+ +A VFD M E +V++N++I G+A + +P EA
Sbjct: 148 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 207
Query: 254 LSLFRELQASNLEPTDVTMLSIIMSCALLGALDLG 285
L+L+ E+ + ++P T++S++ +CA +GAL LG
Sbjct: 208 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
BLAST of Cp4.1LG09g01750 vs. NCBI nr
Match:
XP_023541252.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 493 bits (1268), Expect = 1.13e-169
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0
Query: 41 MAISCIPTSQFALSKPKNEFINQPHPLSLFSKCSSLRELKQIQAYTIKTNLHNDISVLTK 100
MAISCIPTSQFALSKPKNEFINQPHPLSLFSKCSSLRELKQIQAYTIKTNLHNDISVLTK
Sbjct: 1 MAISCIPTSQFALSKPKNEFINQPHPLSLFSKCSSLRELKQIQAYTIKTNLHNDISVLTK 60
Query: 101 LINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL 160
LINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL
Sbjct: 61 LINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL 120
Query: 161 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG 220
LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG
Sbjct: 121 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG 180
Query: 221 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 280
VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA
Sbjct: 181 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 240
Query: 281 LDLG 284
LDLG
Sbjct: 241 LDLG 244
BLAST of Cp4.1LG09g01750 vs. NCBI nr
Match:
KAG7013140.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 486 bits (1251), Expect = 4.26e-167
Identity = 240/244 (98.36%), Postives = 242/244 (99.18%), Query Frame = 0
Query: 41 MAISCIPTSQFALSKPKNEFINQPHPLSLFSKCSSLRELKQIQAYTIKTNLHNDISVLTK 100
MAISCIPTSQFAL+KPK EFINQPHPLSLFSKC+SLRELKQIQAYTIKTNLHNDISVLTK
Sbjct: 1 MAISCIPTSQFALTKPKKEFINQPHPLSLFSKCTSLRELKQIQAYTIKTNLHNDISVLTK 60
Query: 101 LINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL 160
LINFCTRNPT SSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL
Sbjct: 61 LINFCTRNPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL 120
Query: 161 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG 220
LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG
Sbjct: 121 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG 180
Query: 221 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 280
VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA
Sbjct: 181 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 240
Query: 281 LDLG 284
LDLG
Sbjct: 241 LDLG 244
BLAST of Cp4.1LG09g01750 vs. NCBI nr
Match:
KAG6574081.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 486 bits (1251), Expect = 1.15e-166
Identity = 240/244 (98.36%), Postives = 242/244 (99.18%), Query Frame = 0
Query: 41 MAISCIPTSQFALSKPKNEFINQPHPLSLFSKCSSLRELKQIQAYTIKTNLHNDISVLTK 100
MAISCIPTSQFAL+KPK EFINQPHPLSLFSKC+SLRELKQIQAYTIKTNLHNDISVLTK
Sbjct: 1 MAISCIPTSQFALTKPKKEFINQPHPLSLFSKCTSLRELKQIQAYTIKTNLHNDISVLTK 60
Query: 101 LINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL 160
LINFCTRNPT SSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL
Sbjct: 61 LINFCTRNPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL 120
Query: 161 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG 220
LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG
Sbjct: 121 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG 180
Query: 221 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 280
VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA
Sbjct: 181 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 240
Query: 281 LDLG 284
LDLG
Sbjct: 241 LDLG 244
BLAST of Cp4.1LG09g01750 vs. NCBI nr
Match:
XP_022968061.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita maxima])
HSP 1 Score: 482 bits (1240), Expect = 1.98e-165
Identity = 238/244 (97.54%), Postives = 240/244 (98.36%), Query Frame = 0
Query: 41 MAISCIPTSQFALSKPKNEFINQPHPLSLFSKCSSLRELKQIQAYTIKTNLHNDISVLTK 100
MAISCIPT QFAL+KPKNEFINQPHPLSLFSKC+SLRELKQIQAYTIKTNLHNDISVLTK
Sbjct: 1 MAISCIPTCQFALTKPKNEFINQPHPLSLFSKCASLRELKQIQAYTIKTNLHNDISVLTK 60
Query: 101 LINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL 160
LINFCTR PT SSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL
Sbjct: 61 LINFCTRYPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL 120
Query: 161 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG 220
LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLG GHNIYICPTLINMYAACNDMNAARG
Sbjct: 121 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGFGHNIYICPTLINMYAACNDMNAARG 180
Query: 221 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 280
VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA
Sbjct: 181 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 240
Query: 281 LDLG 284
LDLG
Sbjct: 241 LDLG 244
BLAST of Cp4.1LG09g01750 vs. NCBI nr
Match:
XP_022944804.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita moschata])
HSP 1 Score: 478 bits (1231), Expect = 4.56e-164
Identity = 237/244 (97.13%), Postives = 240/244 (98.36%), Query Frame = 0
Query: 41 MAISCIPTSQFALSKPKNEFINQPHPLSLFSKCSSLRELKQIQAYTIKTNLHNDISVLTK 100
MAISCIPTSQFALSKPKNE INQPHPLSLFSKC+SLRELKQIQAYTIKTNLHNDISVLTK
Sbjct: 1 MAISCIPTSQFALSKPKNESINQPHPLSLFSKCTSLRELKQIQAYTIKTNLHNDISVLTK 60
Query: 101 LINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL 160
LINFCTR+PT SSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYL+FSLFAQVL SGL
Sbjct: 61 LINFCTRSPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLIFSLFAQVLFSGL 120
Query: 161 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG 220
LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLG GHNIYICPTLINMYAACNDMNAARG
Sbjct: 121 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGFGHNIYICPTLINMYAACNDMNAARG 180
Query: 221 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 280
VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA
Sbjct: 181 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 240
Query: 281 LDLG 284
LDLG
Sbjct: 241 LDLG 244
BLAST of Cp4.1LG09g01750 vs. ExPASy TrEMBL
Match:
A0A6J1HTT7 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467412 PE=3 SV=1)
HSP 1 Score: 482 bits (1240), Expect = 9.57e-166
Identity = 238/244 (97.54%), Postives = 240/244 (98.36%), Query Frame = 0
Query: 41 MAISCIPTSQFALSKPKNEFINQPHPLSLFSKCSSLRELKQIQAYTIKTNLHNDISVLTK 100
MAISCIPT QFAL+KPKNEFINQPHPLSLFSKC+SLRELKQIQAYTIKTNLHNDISVLTK
Sbjct: 1 MAISCIPTCQFALTKPKNEFINQPHPLSLFSKCASLRELKQIQAYTIKTNLHNDISVLTK 60
Query: 101 LINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL 160
LINFCTR PT SSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL
Sbjct: 61 LINFCTRYPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL 120
Query: 161 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG 220
LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLG GHNIYICPTLINMYAACNDMNAARG
Sbjct: 121 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGFGHNIYICPTLINMYAACNDMNAARG 180
Query: 221 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 280
VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA
Sbjct: 181 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 240
Query: 281 LDLG 284
LDLG
Sbjct: 241 LDLG 244
BLAST of Cp4.1LG09g01750 vs. ExPASy TrEMBL
Match:
A0A6J1FZ61 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449232 PE=3 SV=1)
HSP 1 Score: 478 bits (1231), Expect = 2.21e-164
Identity = 237/244 (97.13%), Postives = 240/244 (98.36%), Query Frame = 0
Query: 41 MAISCIPTSQFALSKPKNEFINQPHPLSLFSKCSSLRELKQIQAYTIKTNLHNDISVLTK 100
MAISCIPTSQFALSKPKNE INQPHPLSLFSKC+SLRELKQIQAYTIKTNLHNDISVLTK
Sbjct: 1 MAISCIPTSQFALSKPKNESINQPHPLSLFSKCTSLRELKQIQAYTIKTNLHNDISVLTK 60
Query: 101 LINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGL 160
LINFCTR+PT SSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYL+FSLFAQVL SGL
Sbjct: 61 LINFCTRSPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLIFSLFAQVLFSGL 120
Query: 161 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMNAARG 220
LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLG GHNIYICPTLINMYAACNDMNAARG
Sbjct: 121 LPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGFGHNIYICPTLINMYAACNDMNAARG 180
Query: 221 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 280
VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA
Sbjct: 181 VFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGA 240
Query: 281 LDLG 284
LDLG
Sbjct: 241 LDLG 244
BLAST of Cp4.1LG09g01750 vs. ExPASy TrEMBL
Match:
A0A5A7STH8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00400 PE=3 SV=1)
HSP 1 Score: 428 bits (1101), Expect = 1.25e-144
Identity = 214/250 (85.60%), Postives = 228/250 (91.20%), Query Frame = 0
Query: 41 MAISCIPTSQFALSKP-----KNEF-INQPHPLSLFSKCSSLRELKQIQAYTIKTNLHND 100
MAISCIPT QF L+KP KNEF INQ HPLSL SKC+SL+ELKQIQAYTIKTNL +D
Sbjct: 1 MAISCIPTCQFTLTKPSSTFSKNEFVINQLHPLSLLSKCTSLKELKQIQAYTIKTNLQSD 60
Query: 101 ISVLTKLINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQ 160
ISVLTKLINFCT NPT S MDHAHHLFD++LDKDI+LFNIMARGYARSNSPYL FSLFAQ
Sbjct: 61 ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFAQ 120
Query: 161 VLCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACND 220
+LCSGLLPDDYTFSSLLKACA SKAL +G LHCFA+KLGL HNIYICPTLINMYA CND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALRQGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180
Query: 221 MNAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMS 280
MNAARGVFD ME+PCIVSYNAIITGYARSSQPNEALSLFRELQAS++EPTDVTMLS+IMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASDIEPTDVTMLSVIMS 240
Query: 281 CALLGALDLG 284
CALLGALDLG
Sbjct: 241 CALLGALDLG 250
BLAST of Cp4.1LG09g01750 vs. ExPASy TrEMBL
Match:
A0A1S3BFK0 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489124 PE=3 SV=1)
HSP 1 Score: 428 bits (1101), Expect = 1.25e-144
Identity = 214/250 (85.60%), Postives = 228/250 (91.20%), Query Frame = 0
Query: 41 MAISCIPTSQFALSKP-----KNEF-INQPHPLSLFSKCSSLRELKQIQAYTIKTNLHND 100
MAISCIPT QF L+KP KNEF INQ HPLSL SKC+SL+ELKQIQAYTIKTNL +D
Sbjct: 1 MAISCIPTCQFTLTKPSSTFSKNEFVINQLHPLSLLSKCTSLKELKQIQAYTIKTNLQSD 60
Query: 101 ISVLTKLINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQ 160
ISVLTKLINFCT NPT S MDHAHHLFD++LDKDI+LFNIMARGYARSNSPYL FSLFAQ
Sbjct: 61 ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFAQ 120
Query: 161 VLCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACND 220
+LCSGLLPDDYTFSSLLKACA SKAL +G LHCFA+KLGL HNIYICPTLINMYA CND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALRQGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180
Query: 221 MNAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMS 280
MNAARGVFD ME+PCIVSYNAIITGYARSSQPNEALSLFRELQAS++EPTDVTMLS+IMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASDIEPTDVTMLSVIMS 240
Query: 281 CALLGALDLG 284
CALLGALDLG
Sbjct: 241 CALLGALDLG 250
BLAST of Cp4.1LG09g01750 vs. ExPASy TrEMBL
Match:
A0A0A0KU15 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605160 PE=3 SV=1)
HSP 1 Score: 428 bits (1100), Expect = 1.77e-144
Identity = 214/250 (85.60%), Postives = 226/250 (90.40%), Query Frame = 0
Query: 41 MAISCIPTSQFALSKP-----KNEF-INQPHPLSLFSKCSSLRELKQIQAYTIKTNLHND 100
MAISCIPT QF L+KP KNEF INQ HPLSL SKC+SL ELKQIQAYTIKTNL +D
Sbjct: 1 MAISCIPTCQFTLTKPSSAFSKNEFVINQLHPLSLLSKCTSLNELKQIQAYTIKTNLQSD 60
Query: 101 ISVLTKLINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQ 160
ISVLTKLINFCT NPT S MDHAHHLFD++LDKDI+LFNIMARGYARSNSPYL FSLF +
Sbjct: 61 ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGE 120
Query: 161 VLCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACND 220
+LCSGLLPDDYTFSSLLKACA SKAL EG LHCFA+KLGL HNIYICPTLINMYA CND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180
Query: 221 MNAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMS 280
MNAARGVFD ME+PCIVSYNAIITGYARSSQPNEALSLFRELQASN+EPTDVTMLS+IMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240
Query: 281 CALLGALDLG 284
CALLGALDLG
Sbjct: 241 CALLGALDLG 250
BLAST of Cp4.1LG09g01750 vs. TAIR 10
Match:
AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 295.0 bits (754), Expect = 6.2e-80
Identity = 144/248 (58.06%), Postives = 189/248 (76.21%), Query Frame = 0
Query: 37 LSIQMAISCIPTSQFALSKPKNEFINQPHPLSLFSKCSSLRELKQIQAYTIKTNLHNDIS 96
+S IS ++ K + +N +P+ L SKC+SLREL QIQAY IK+++ D+S
Sbjct: 3 ISSASLISSFSHAETFTKHSKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHI-EDVS 62
Query: 97 VLTKLINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQVL 156
+ KLINFCT +PT SSM +A HLF+ M + DIV+FN MARGY+R +P VFSLF ++L
Sbjct: 63 FVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEIL 122
Query: 157 CSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDMN 216
G+LPD+YTF SLLKACA +KALEEGRQLHC ++KLGL N+Y+CPTLINMY C D++
Sbjct: 123 EDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVD 182
Query: 217 AARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCA 276
+AR VFD + EPC+V YNA+ITGYAR ++PNEALSLFRE+Q L+P ++T+LS++ SCA
Sbjct: 183 SARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCA 242
Query: 277 LLGALDLG 285
LLG+LDLG
Sbjct: 243 LLGSLDLG 249
BLAST of Cp4.1LG09g01750 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 154.1 bits (388), Expect = 1.7e-37
Identity = 91/285 (31.93%), Postives = 148/285 (51.93%), Query Frame = 0
Query: 41 MAISC----IPTSQF------ALSKPKNEFINQPHPLSLFSKCSSLRELKQIQAYTIKTN 100
M +SC +P+S + + S P + I LSL C +L+ L+ I A IK
Sbjct: 1 MMLSCSPLTVPSSSYPFHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIG 60
Query: 101 LHNDISVLTKLINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFS 160
LHN L+KLI FC +P + +A +F + + +++++N M RG+A S+ P
Sbjct: 61 LHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALK 120
Query: 161 LFAQVLCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYA 220
L+ ++ GLLP+ YTF +LK+CA SKA +EG+Q+H +KLG ++Y+ +LI+MY
Sbjct: 121 LYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYV 180
Query: 221 ACNDMNAARGVFDGMEEPCIVSY-------------------------------NAIITG 280
+ A VFD +VSY NA+I+G
Sbjct: 181 QNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISG 240
Query: 281 YARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSCALLGALDLG 285
YA + EAL LF+++ +N+ P + TM++++ +CA G+++LG
Sbjct: 241 YAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
BLAST of Cp4.1LG09g01750 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 144.1 bits (362), Expect = 1.8e-34
Identity = 84/249 (33.73%), Postives = 130/249 (52.21%), Query Frame = 0
Query: 67 LSLFSKCSSLRELKQIQAYTIKTNLHNDISVLTKLINFCTRNPTISSMDHAHHLFDKMLD 126
+S +CS ELKQI A +KT L D +TK ++FC + + + +A +FD
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 127 KDIVLFNIMARGYARSNSPYLVFSLFAQVLCSGLLPDDYTFSSLLKACAGSKALEEGRQL 186
D L+N+M RG++ S+ P L+ ++LCS + YTF SLLKAC+ A EE Q+
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 187 HCFAIKLGLGHNIYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAIITGYARSSQP 246
H KLG +++Y +LIN YA + A +FD + EP VS+N++I GY ++ +
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 247 N-------------------------------EALSLFRELQASNLEPTDVTMLSIIMSC 285
+ EAL LF E+Q S++EP +V++ + + +C
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
BLAST of Cp4.1LG09g01750 vs. TAIR 10
Match:
AT2G33760.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 134.0 bits (336), Expect = 1.8e-31
Identity = 69/209 (33.01%), Postives = 120/209 (57.42%), Query Frame = 0
Query: 76 LRELKQIQAYTIKTNLHNDISVLTKLINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIM 135
+++L+Q+ A+ I T S+LTKLI I+ + H LF + D LFN +
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIA---YTHLLFLSVPLPDDFLFNSV 81
Query: 136 ARGYARSNSPYLVFSLFAQVLCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGL 195
+ ++ P + + ++L S + P +YTF+S++K+CA AL G+ +HC A+ G
Sbjct: 82 IKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGF 141
Query: 196 GHNIYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRE 255
G + Y+ L+ Y+ C DM AR VFD M E IV++N++++G+ ++ +EA+ +F +
Sbjct: 142 GLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQ 201
Query: 256 LQASNLEPTDVTMLSIIMSCALLGALDLG 285
++ S EP T +S++ +CA GA+ LG
Sbjct: 202 MRESGFEPDSATFVSLLSACAQTGAVSLG 227
BLAST of Cp4.1LG09g01750 vs. TAIR 10
Match:
AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 134.0 bits (336), Expect = 1.8e-31
Identity = 75/215 (34.88%), Postives = 130/215 (60.47%), Query Frame = 0
Query: 74 SSLRELKQIQAYTIKTNLH-NDISVLTKLINFCTRNPTISSMDHAHHLFDKMLDKDIVLF 133
SS+ +L+QI A++I+ + +D + LI + P+ M +AH +F K ++K I +F
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSK-IEKPINVF 87
Query: 134 --NIMARGYARSNSPYLVFSLFAQVLCSGLL-PDDYTFSSLLKACAGSKALEEGRQLHCF 193
N + RGYA + FSL+ ++ SGL+ PD +T+ L+KA + G +H
Sbjct: 88 IWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 147
Query: 194 AIKLGLGHNIYICPTLINMYAACNDMNAARGVFDGMEEPCIVSYNAIITGYARSSQPNEA 253
I+ G G IY+ +L+++YA C D+ +A VFD M E +V++N++I G+A + +P EA
Sbjct: 148 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 207
Query: 254 LSLFRELQASNLEPTDVTMLSIIMSCALLGALDLG 285
L+L+ E+ + ++P T++S++ +CA +GAL LG
Sbjct: 208 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8LK93 | 8.8e-79 | 58.06 | Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop... | [more] |
Q9LN01 | 2.4e-36 | 31.93 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q9FJY7 | 2.5e-33 | 33.73 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
P93011 | 2.6e-30 | 33.01 | Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana OX... | [more] |
A8MQA3 | 2.6e-30 | 34.88 | Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
XP_023541252.1 | 1.13e-169 | 100.00 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita ... | [more] |
KAG7013140.1 | 4.26e-167 | 98.36 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
KAG6574081.1 | 1.15e-166 | 98.36 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022968061.1 | 1.98e-165 | 97.54 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita ... | [more] |
XP_022944804.1 | 4.56e-164 | 97.13 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HTT7 | 9.57e-166 | 97.54 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucurbit... | [more] |
A0A6J1FZ61 | 2.21e-164 | 97.13 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucurbit... | [more] |
A0A5A7STH8 | 1.25e-144 | 85.60 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BFK0 | 1.25e-144 | 85.60 | pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucumis ... | [more] |
A0A0A0KU15 | 1.77e-144 | 85.60 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G6051... | [more] |
Match Name | E-value | Identity | Description | |
AT2G02980.1 | 6.2e-80 | 58.06 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G08070.1 | 1.7e-37 | 31.93 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G66520.1 | 1.8e-34 | 33.73 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G33760.1 | 1.8e-31 | 33.01 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G21065.1 | 1.8e-31 | 34.88 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |