Cp4.1LG09g01450 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g01450
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	homeobox-leucine zipper protein HAT5-like
Location	Cp4.1LG09: 869432 .. 870131 (-)
RNA-Seq Expression	Cp4.1LG09g01450
Synteny	Cp4.1LG09g01450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTTCATTTCTTCAGCCAAGAAACCTTCTCCATTTGACAATCCCGGATGCACCCATTTCCCAGTTATGAATTCTGATACTCCCCCTTCTCTTTCCAGCCCCAATTCCTTCTCTTCCATGGAAAAGAAAAGAAGGCTCACACCGGATCAACTTCGGCTGCTCGAGACCAGCTTTGATGTTCACAACAAGCTCGAACATGACAGGAAGCTTCAAATTGCAGAGGAGATTGGCTTGCGGCCTCGCCAAGTTGCTGTTTGGTTCCAGAATCGAAGGGCTCGATCCAAGACCAAGAAAATTGTGTTTGATTATGATTCTTTGAATTCTCAATATCAAAACCTCAAGAATGAGTTTGACAGTCTTGTTAAGCTGAATCAAGAACTGAAAACAGAGGTATGGCATTCAAACTTCCAGATCTGAAATGGGTTTTCTCTAAAACTACTGATTTTTGTAACAGGTTGATGAACTAAGAGAAAAATGGGCTGCCACTGAGAAAATGAAGAACCCCTTTGAACCAGATGAACTTGAAGCCATGGATTCATCAGTTACAGAGCTACTTGGGGAAAGCTTCCTGCAAGATGAAGAAGATGAATTAGGCTACTTGGGGAAGCTAGAAGATGAACTTTCAGCTAATGAATTCATGGATTCGTTTGATCTTTGTGCTTCTGGTCTTATTGATTTCAAGTATGATTCTCAGTGA

mRNA sequence

ATGTTCTTCATTTCTTCAGCCAAGAAACCTTCTCCATTTGACAATCCCGGATGCACCCATTTCCCAGTTATGAATTCTGATACTCCCCCTTCTCTTTCCAGCCCCAATTCCTTCTCTTCCATGGAAAAGAAAAGAAGGCTCACACCGGATCAACTTCGGCTGCTCGAGACCAGCTTTGATGTTCACAACAAGCTCGAACATGACAGGAAGCTTCAAATTGCAGAGGAGATTGGCTTGCGGCCTCGCCAAGTTGCTGTTTGGTTCCAGAATCGAAGGGCTCGATCCAAGACCAAGAAAATTGTGTTTGATTATGATTCTTTGAATTCTCAATATCAAAACCTCAAGAATGAGTTTGACAGTCTTGTTAAGCTGAATCAAGAACTGAAAACAGAGGTTGATGAACTAAGAGAAAAATGGGCTGCCACTGAGAAAATGAAGAACCCCTTTGAACCAGATGAACTTGAAGCCATGGATTCATCAGTTACAGAGCTACTTGGGGAAAGCTTCCTGCAAGATGAAGAAGATGAATTAGGCTACTTGGGGAAGCTAGAAGATGAACTTTCAGCTAATGAATTCATGGATTCGTTTGATCTTTGTGCTTCTGGTCTTATTGATTTCAAGTATGATTCTCAGTGA

Coding sequence (CDS)

ATGTTCTTCATTTCTTCAGCCAAGAAACCTTCTCCATTTGACAATCCCGGATGCACCCATTTCCCAGTTATGAATTCTGATACTCCCCCTTCTCTTTCCAGCCCCAATTCCTTCTCTTCCATGGAAAAGAAAAGAAGGCTCACACCGGATCAACTTCGGCTGCTCGAGACCAGCTTTGATGTTCACAACAAGCTCGAACATGACAGGAAGCTTCAAATTGCAGAGGAGATTGGCTTGCGGCCTCGCCAAGTTGCTGTTTGGTTCCAGAATCGAAGGGCTCGATCCAAGACCAAGAAAATTGTGTTTGATTATGATTCTTTGAATTCTCAATATCAAAACCTCAAGAATGAGTTTGACAGTCTTGTTAAGCTGAATCAAGAACTGAAAACAGAGGTTGATGAACTAAGAGAAAAATGGGCTGCCACTGAGAAAATGAAGAACCCCTTTGAACCAGATGAACTTGAAGCCATGGATTCATCAGTTACAGAGCTACTTGGGGAAAGCTTCCTGCAAGATGAAGAAGATGAATTAGGCTACTTGGGGAAGCTAGAAGATGAACTTTCAGCTAATGAATTCATGGATTCGTTTGATCTTTGTGCTTCTGGTCTTATTGATTTCAAGTATGATTCTCAGTGA

Protein sequence

MFFISSAKKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFDVHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDSLVKLNQELKTEVDELREKWAATEKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYLGKLEDELSANEFMDSFDLCASGLIDFKYDSQ

Homology

[Close]

BLAST of Cp4.1LG09g01450 vs. ExPASy Swiss-Prot
Match: Q02283 (Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana OX=3702 GN=HAT5 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.8e-24
Identity = 69/161 (42.86%), Postives = 98/161 (60.87%), Query Frame = 0


Query: 42  EKKRRLTPDQLRLLETSFDVHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIV 101
           EKKRRLT +Q+ LLE SF+  NKLE +RK Q+A+++GL+PRQVAVWFQNRRAR KTK++ 
Sbjct: 67  EKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 126

Query: 102 FDYDSLNSQYQNLKNEFDSLVKLNQELKTEVDELREKWAATEKMKNP-----FEPDELEA 161
            DYD L S Y  L + +DS+V  N +L++EV  L EK    ++  N       EP++L+ 
Sbjct: 127 RDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETANEPPGQVPEPNQLDP 186

Query: 162 MDSSVTELLGESFLQDEEDELGYLGKLEDELSANEFMDSFD 198
           +  +   +  E  L       G +G    +  A + +DS D
Sbjct: 187 VYINAAAIKTEDRLSS-----GSVGSAVLDDDAPQLLDSCD 222

[Close]

BLAST of Cp4.1LG09g01450 vs. ExPASy Swiss-Prot
Match: P0CJ65 (Homeobox-leucine zipper protein ATHB-54 OS=Arabidopsis thaliana OX=3702 GN=ATHB-54 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.3e-23
Identity = 59/104 (56.73%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 43  KKRRLTPDQLRLLETSFDVHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVF 102
           KKR+LTP QLRLLE SF+   +LE DRKL +AE++GL+P QVAVWFQNRRAR KTK++  
Sbjct: 68  KKRKLTPIQLRLLEESFEEEKRLEPDRKLWLAEKLGLQPSQVAVWFQNRRARYKTKQLEH 127

Query: 103 DYDSLNSQYQNLKNEFDSLVKLNQELKTEVDELREKWAATEKMK 147
           D DSL + Y  LK ++D L   NQ LK++VD L+EK    E ++
Sbjct: 128 DCDSLKASYAKLKTDWDILFVQNQTLKSKVDLLKEKLKMQENLE 171

[Close]

BLAST of Cp4.1LG09g01450 vs. ExPASy Swiss-Prot
Match: Q940J1 (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-16 PE=2 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 9.6e-22
Identity = 54/106 (50.94%), Postives = 75/106 (70.75%), Query Frame = 0


Query: 42  EKKRRLTPDQLRLLETSFDVHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIV 101
           EKKRRL  DQ++ LE +F++ NKLE +RK ++A+E+GL+PRQVAVWFQNRRAR KTK++ 
Sbjct: 58  EKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLE 117

Query: 102 FDYDSLNSQYQNLKNEFDSLVKLNQELKTEVDELREKWAATEKMKN 148
            DY  L  QY +L++ FDSL + N  L  E+ +++ K    E   N
Sbjct: 118 KDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNN 163

[Close]

BLAST of Cp4.1LG09g01450 vs. ExPASy Swiss-Prot
Match: Q8LFD3 (Homeobox-leucine zipper protein ATHB-23 OS=Arabidopsis thaliana OX=3702 GN=ATHB-23 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.6e-21
Identity = 51/97 (52.58%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 42  EKKRRLTPDQLRLLETSFDVHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIV 101
           EKKRRL  +QL+ LE  F++ NKLE DRKL++A  +GL+PRQ+A+WFQNRRARSKTK++ 
Sbjct: 70  EKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSKTKQLE 129

Query: 102 FDYDSLNSQYQNLKNEFDSLVKLNQELKTEVDELREK 139
            DYD L  Q+++L++E + L   NQ+L+ +V  L+ +
Sbjct: 130 KDYDMLKRQFESLRDENEVLQTQNQKLQAQVMALKSR 166

[Close]

BLAST of Cp4.1LG09g01450 vs. ExPASy Swiss-Prot
Match: P46668 (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.1e-21
Identity = 65/157 (41.40%), Postives = 103/157 (65.61%), Query Frame = 0


Query: 42  EKKRRLTPDQLRLLETSFDVHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIV 101
           EKKRRL+ +Q++ LE +F++ NKLE +RK+++A+E+GL+PRQVAVWFQNRRAR KTK++ 
Sbjct: 61  EKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLE 120

Query: 102 FDYDSLNSQYQNLKNEFDSLVKLNQELKTEVDELREKWAATEKMKNPFEPDELEAMDSSV 161
            DY  L +QY +L++ FDSL + N+ L  E+ +L+       K+      +E E  +++V
Sbjct: 121 KDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLK------TKLNGGGGEEEEEENNAAV 180

Query: 162 TELLGESFLQDEEDELGYLGKL-EDELSANEFMDSFD 198
           T    ES +  +E+E+    K+ E   S  +F++  D
Sbjct: 181 TT---ESDISVKEEEVSLPEKITEAPSSPPQFLEHSD 208

[Close]

BLAST of Cp4.1LG09g01450 vs. NCBI nr
Match: XP_023542280.1 (homeobox-leucine zipper protein HAT5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412 bits (1058), Expect = 8.00e-145
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MFFISSAKKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFD 60
           MFFISSAKKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFD
Sbjct: 1   MFFISSAKKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFD 60

Query: 61  VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDS 120
           VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDS
Sbjct: 61  VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDS 120

Query: 121 LVKLNQELKTEVDELREKWAATEKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYL 180
           LVKLNQELKTEVDELREKWAATEKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYL
Sbjct: 121 LVKLNQELKTEVDELREKWAATEKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYL 180

Query: 181 GKLEDELSANEFMDSFDLCASGLIDFKYDSQ 211
           GKLEDELSANEFMDSFDLCASGLIDFKYDSQ
Sbjct: 181 GKLEDELSANEFMDSFDLCASGLIDFKYDSQ 211

[Close]

BLAST of Cp4.1LG09g01450 vs. NCBI nr
Match: XP_022944974.1 (homeobox-leucine zipper protein HAT5-like [Cucurbita moschata])

HSP 1 Score: 407 bits (1046), Expect = 5.40e-143
Identity = 208/211 (98.58%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MFFISSAKKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFD 60
           MFFISS KKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFD
Sbjct: 1   MFFISSTKKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFD 60

Query: 61  VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDS 120
           VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDS
Sbjct: 61  VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDS 120

Query: 121 LVKLNQELKTEVDELREKWAATEKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYL 180
           LVKLNQELKTEVDELREKWAA EKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYL
Sbjct: 121 LVKLNQELKTEVDELREKWAAIEKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYL 180

Query: 181 GKLEDELSANEFMDSFDLCASGLIDFKYDSQ 211
           GKLEDELSANEFMDSFD+CASGLIDFKYDSQ
Sbjct: 181 GKLEDELSANEFMDSFDICASGLIDFKYDSQ 211

[Close]

BLAST of Cp4.1LG09g01450 vs. NCBI nr
Match: KAG6574110.1 (Homeobox-leucine zipper protein ATHB-54, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 404 bits (1039), Expect = 6.31e-142
Identity = 206/211 (97.63%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MFFISSAKKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFD 60
           MFFISS KKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFD
Sbjct: 1   MFFISSTKKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFD 60

Query: 61  VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDS 120
           VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRA+SKTKKIVFDYDSLNSQYQNLKNEFDS
Sbjct: 61  VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRAQSKTKKIVFDYDSLNSQYQNLKNEFDS 120

Query: 121 LVKLNQELKTEVDELREKWAATEKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYL 180
           LVKLNQELKTEVDELREKWAA EKMKNPFEPDELEAMDSSVTELLGE+FLQDEEDELGYL
Sbjct: 121 LVKLNQELKTEVDELREKWAAIEKMKNPFEPDELEAMDSSVTELLGETFLQDEEDELGYL 180

Query: 181 GKLEDELSANEFMDSFDLCASGLIDFKYDSQ 211
           GKLEDELSANEFMDSFD+CASGLIDFKYDSQ
Sbjct: 181 GKLEDELSANEFMDSFDICASGLIDFKYDSQ 211

[Close]

BLAST of Cp4.1LG09g01450 vs. NCBI nr
Match: KAG7013170.1 (Homeobox-leucine zipper protein HAT5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 403 bits (1035), Expect = 2.57e-141
Identity = 206/211 (97.63%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MFFISSAKKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFD 60
           MFFISS KKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFD
Sbjct: 1   MFFISSTKKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFD 60

Query: 61  VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDS 120
           VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDS
Sbjct: 61  VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDS 120

Query: 121 LVKLNQELKTEVDELREKWAATEKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYL 180
           LVKLNQELKTEVDELREKWAA EKMKNPFEPDELEAMDSSVTELLGE+FLQDEEDELGYL
Sbjct: 121 LVKLNQELKTEVDELREKWAAIEKMKNPFEPDELEAMDSSVTELLGETFLQDEEDELGYL 180

Query: 181 GKLEDELSANEFMDSFDLCASGLIDFKYDSQ 211
           GKLEDELSANEFMDSF +CASGLIDFKYDSQ
Sbjct: 181 GKLEDELSANEFMDSFAICASGLIDFKYDSQ 211

[Close]

BLAST of Cp4.1LG09g01450 vs. NCBI nr
Match: XP_022968264.1 (homeobox-leucine zipper protein HAT5-like [Cucurbita maxima])

HSP 1 Score: 382 bits (980), Expect = 8.58e-133
Identity = 199/220 (90.45%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MFFISSAKKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFD 60
           MFFISS KKPSPFDNPGCTHFPVMNSDTPPSLSS NSFSSMEKKRRLTPDQLRLLE+SFD
Sbjct: 1   MFFISSTKKPSPFDNPGCTHFPVMNSDTPPSLSSANSFSSMEKKRRLTPDQLRLLESSFD 60

Query: 61  VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDS 120
           VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQ LKNEFDS
Sbjct: 61  VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQKLKNEFDS 120

Query: 121 LVKLNQELKTEVDELREKWAATEKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYL 180
           LVKLNQELKTEVDELREKWAATEKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYL
Sbjct: 121 LVKLNQELKTEVDELREKWAATEKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYL 180

Query: 181 GKLEDELSANEFMDSFDLCASGL---------IDFKYDSQ 211
           GKLEDELSANEFMDS+++ +S +          DFKYDSQ
Sbjct: 181 GKLEDELSANEFMDSYNIISSAVEDQSLCFWSFDFKYDSQ 220

[Close]

BLAST of Cp4.1LG09g01450 vs. ExPASy TrEMBL
Match: A0A6J1FZN4 (homeobox-leucine zipper protein HAT5-like OS=Cucurbita moschata OX=3662 GN=LOC111449350 PE=4 SV=1)

HSP 1 Score: 407 bits (1046), Expect = 2.62e-143
Identity = 208/211 (98.58%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MFFISSAKKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFD 60
           MFFISS KKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFD
Sbjct: 1   MFFISSTKKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFD 60

Query: 61  VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDS 120
           VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDS
Sbjct: 61  VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDS 120

Query: 121 LVKLNQELKTEVDELREKWAATEKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYL 180
           LVKLNQELKTEVDELREKWAA EKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYL
Sbjct: 121 LVKLNQELKTEVDELREKWAAIEKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYL 180

Query: 181 GKLEDELSANEFMDSFDLCASGLIDFKYDSQ 211
           GKLEDELSANEFMDSFD+CASGLIDFKYDSQ
Sbjct: 181 GKLEDELSANEFMDSFDICASGLIDFKYDSQ 211

[Close]

BLAST of Cp4.1LG09g01450 vs. ExPASy TrEMBL
Match: A0A6J1HZ57 (homeobox-leucine zipper protein HAT5-like OS=Cucurbita maxima OX=3661 GN=LOC111467553 PE=4 SV=1)

HSP 1 Score: 382 bits (980), Expect = 4.15e-133
Identity = 199/220 (90.45%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MFFISSAKKPSPFDNPGCTHFPVMNSDTPPSLSSPNSFSSMEKKRRLTPDQLRLLETSFD 60
           MFFISS KKPSPFDNPGCTHFPVMNSDTPPSLSS NSFSSMEKKRRLTPDQLRLLE+SFD
Sbjct: 1   MFFISSTKKPSPFDNPGCTHFPVMNSDTPPSLSSANSFSSMEKKRRLTPDQLRLLESSFD 60

Query: 61  VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDS 120
           VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQ LKNEFDS
Sbjct: 61  VHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQKLKNEFDS 120

Query: 121 LVKLNQELKTEVDELREKWAATEKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYL 180
           LVKLNQELKTEVDELREKWAATEKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYL
Sbjct: 121 LVKLNQELKTEVDELREKWAATEKMKNPFEPDELEAMDSSVTELLGESFLQDEEDELGYL 180

Query: 181 GKLEDELSANEFMDSFDLCASGL---------IDFKYDSQ 211
           GKLEDELSANEFMDS+++ +S +          DFKYDSQ
Sbjct: 181 GKLEDELSANEFMDSYNIISSAVEDQSLCFWSFDFKYDSQ 220

[Close]

BLAST of Cp4.1LG09g01450 vs. ExPASy TrEMBL
Match: A0A6J1DBJ2 (homeobox-leucine zipper protein ATHB-16 OS=Momordica charantia OX=3673 GN=LOC111019178 PE=4 SV=1)

HSP 1 Score: 197 bits (502), Expect = 7.88e-60
Identity = 118/215 (54.88%), Postives = 143/215 (66.51%), Query Frame = 0


Query: 39  SSMEKKRRLTPDQLRLLETSFDVHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTK 98
           +S  KKRRLT DQ+RLLE +F+V NKLEH+RK+Q+AEEIGLRPRQVAVWFQNRRARSKTK
Sbjct: 42  NSAGKKRRLTVDQVRLLERNFNVENKLEHERKVQLAEEIGLRPRQVAVWFQNRRARSKTK 101

Query: 99  KIVFDYDSLNSQYQNLKNEFDSLVKLNQELKTEVDELREKWAATEKMKNPFEPDELE--A 158
           KI  DY+SLN++Y  LK ++ SLVKLN +LK E DELREKWAA EKM+NP EP E+E  A
Sbjct: 102 KIEIDYESLNAEYHKLKKDYTSLVKLNHDLKAEADELREKWAAAEKMRNPLEPVEVEVEA 161

Query: 159 MDSSVTEL-------LGE---------------------------------------SFL 205
           MDSSVTEL       +GE                                       +FL
Sbjct: 162 MDSSVTELGKPNTSTMGEDLYNVQMGSSRQEEGSRSSSKSDGFYSESPTMENQSQSDNFL 221

[Close]

BLAST of Cp4.1LG09g01450 vs. ExPASy TrEMBL
Match: A0A6J1GYD2 (homeobox-leucine zipper protein ATHB-16-like OS=Cucurbita moschata OX=3662 GN=LOC111458422 PE=4 SV=1)

HSP 1 Score: 195 bits (495), Expect = 4.62e-59
Identity = 119/222 (53.60%), Postives = 147/222 (66.22%), Query Frame = 0


Query: 30  PSLSSPNSFSSME----------------KKRRLTPDQLRLLETSFDVHNKLEHDRKLQI 89
           PSL   +S SSME                KKRRLT DQ+R+LE +F+  NKLEH+RK+QI
Sbjct: 16  PSLWISDSCSSMEGEFSQPQAKADRNRGGKKRRLTLDQVRMLERTFNAENKLEHERKVQI 75

Query: 90  AEEIGLRPRQVAVWFQNRRARSKTKKIVFDYDSLNSQYQNLKNEFDSLVKLNQELKTEVD 149
           AEEIGLRPRQVAVWFQNRRARSKTKKI  DY+SLN++Y  LKN+FDSL+K+N ELK EV+
Sbjct: 76  AEEIGLRPRQVAVWFQNRRARSKTKKIEIDYESLNAEYDKLKNDFDSLLKVNHELKAEVN 135

Query: 150 ELREKWAATEKMKNPFEP-------------DELEAMDSSVTELL------------GES 208
           +LR+KWAATEKM NP+EP              E  +  SS +++               +
Sbjct: 136 QLRDKWAATEKMNNPYEPVGALYKVEMGSSRQEQGSRSSSKSDVFYAESPTRENQSRSGN 195

[Close]

BLAST of Cp4.1LG09g01450 vs. ExPASy TrEMBL
Match: A0A5D3CVI2 (Homeobox-leucine zipper protein ATHB-16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00270 PE=4 SV=1)

HSP 1 Score: 192 bits (487), Expect = 4.58e-58
Identity = 114/208 (54.81%), Postives = 138/208 (66.35%), Query Frame = 0


Query: 43  KKRRLTPDQLRLLETSFDVHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVF 102
           KKRRL+ DQ+RLLE +F+  NKLEH+RK+QIAEEIGLRPRQVAVWFQNRRARSK K+I  
Sbjct: 10  KKRRLSVDQVRLLEKNFNDENKLEHERKVQIAEEIGLRPRQVAVWFQNRRARSKMKRIES 69

Query: 103 DYDSLNSQYQNLKNEFDSLVKLNQELKTEVDELREKWAATEKMKNPFEPDELEAMDSSVT 162
           DY+ LN++Y  LK++FDSL+ +N ELK EVD+LR KWAA EKMKN FEP  +EAM SSVT
Sbjct: 70  DYECLNAEYDKLKSDFDSLLNMNHELKAEVDQLRAKWAAMEKMKNHFEPVGVEAMVSSVT 129

Query: 163 EL-------LGE----------------------------------------SFLQDEED 203
           EL       +GE                                        +FLQDEED
Sbjct: 130 ELEKAKAKTMGEILYEVQMGSSRHELEGSLSSSKSDCFYSESPTRENQSKSANFLQDEED 189

[Close]

BLAST of Cp4.1LG09g01450 vs. TAIR 10
Match: AT3G01470.1 (homeobox 1 )

HSP 1 Score: 112.1 bits (279), Expect = 5.6e-25
Identity = 69/161 (42.86%), Postives = 98/161 (60.87%), Query Frame = 0


Query: 42  EKKRRLTPDQLRLLETSFDVHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIV 101
           EKKRRLT +Q+ LLE SF+  NKLE +RK Q+A+++GL+PRQVAVWFQNRRAR KTK++ 
Sbjct: 67  EKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLE 126

Query: 102 FDYDSLNSQYQNLKNEFDSLVKLNQELKTEVDELREKWAATEKMKNP-----FEPDELEA 161
            DYD L S Y  L + +DS+V  N +L++EV  L EK    ++  N       EP++L+ 
Sbjct: 127 RDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQETANEPPGQVPEPNQLDP 186

Query: 162 MDSSVTELLGESFLQDEEDELGYLGKLEDELSANEFMDSFD 198
           +  +   +  E  L       G +G    +  A + +DS D
Sbjct: 187 VYINAAAIKTEDRLSS-----GSVGSAVLDDDAPQLLDSCD 222

[Close]

BLAST of Cp4.1LG09g01450 vs. TAIR 10
Match: AT1G27045.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-24
Identity = 59/104 (56.73%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 43  KKRRLTPDQLRLLETSFDVHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIVF 102
           KKR+LTP QLRLLE SF+   +LE DRKL +AE++GL+P QVAVWFQNRRAR KTK++  
Sbjct: 68  KKRKLTPIQLRLLEESFEEEKRLEPDRKLWLAEKLGLQPSQVAVWFQNRRARYKTKQLEH 127

Query: 103 DYDSLNSQYQNLKNEFDSLVKLNQELKTEVDELREKWAATEKMK 147
           D DSL + Y  LK ++D L   NQ LK++VD L+EK    E ++
Sbjct: 128 DCDSLKASYAKLKTDWDILFVQNQTLKSKVDLLKEKLKMQENLE 171

[Close]

BLAST of Cp4.1LG09g01450 vs. TAIR 10
Match: AT4G40060.1 (homeobox protein 16 )

HSP 1 Score: 105.1 bits (261), Expect = 6.8e-23
Identity = 54/106 (50.94%), Postives = 75/106 (70.75%), Query Frame = 0


Query: 42  EKKRRLTPDQLRLLETSFDVHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIV 101
           EKKRRL  DQ++ LE +F++ NKLE +RK ++A+E+GL+PRQVAVWFQNRRAR KTK++ 
Sbjct: 58  EKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLE 117

Query: 102 FDYDSLNSQYQNLKNEFDSLVKLNQELKTEVDELREKWAATEKMKN 148
            DY  L  QY +L++ FDSL + N  L  E+ +++ K    E   N
Sbjct: 118 KDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNN 163

[Close]

BLAST of Cp4.1LG09g01450 vs. TAIR 10
Match: AT1G26960.1 (homeobox protein 23 )

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22
Identity = 51/97 (52.58%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 42  EKKRRLTPDQLRLLETSFDVHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIV 101
           EKKRRL  +QL+ LE  F++ NKLE DRKL++A  +GL+PRQ+A+WFQNRRARSKTK++ 
Sbjct: 70  EKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSKTKQLE 129

Query: 102 FDYDSLNSQYQNLKNEFDSLVKLNQELKTEVDELREK 139
            DYD L  Q+++L++E + L   NQ+L+ +V  L+ +
Sbjct: 130 KDYDMLKRQFESLRDENEVLQTQNQKLQAQVMALKSR 166

[Close]

BLAST of Cp4.1LG09g01450 vs. TAIR 10
Match: AT2G22430.1 (homeobox protein 6 )

HSP 1 Score: 104.0 bits (258), Expect = 1.5e-22
Identity = 65/157 (41.40%), Postives = 103/157 (65.61%), Query Frame = 0


Query: 42  EKKRRLTPDQLRLLETSFDVHNKLEHDRKLQIAEEIGLRPRQVAVWFQNRRARSKTKKIV 101
           EKKRRL+ +Q++ LE +F++ NKLE +RK+++A+E+GL+PRQVAVWFQNRRAR KTK++ 
Sbjct: 61  EKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLE 120

Query: 102 FDYDSLNSQYQNLKNEFDSLVKLNQELKTEVDELREKWAATEKMKNPFEPDELEAMDSSV 161
            DY  L +QY +L++ FDSL + N+ L  E+ +L+       K+      +E E  +++V
Sbjct: 121 KDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLK------TKLNGGGGEEEEEENNAAV 180

Query: 162 TELLGESFLQDEEDELGYLGKL-EDELSANEFMDSFD 198
           T    ES +  +E+E+    K+ E   S  +F++  D
Sbjct: 181 TT---ESDISVKEEEVSLPEKITEAPSSPPQFLEHSD 208

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g01450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q02283	7.8e-24	42.86	Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana OX=3702 GN=HAT5 PE=...	[more]
P0CJ65	2.3e-23	56.73	Homeobox-leucine zipper protein ATHB-54 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q940J1	9.6e-22	50.94	Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q8LFD3	1.6e-21	52.58	Homeobox-leucine zipper protein ATHB-23 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
P46668	2.1e-21	41.40	Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana OX=3702 GN=ATHB-6...	[more]

BLAST of Cp4.1LG09g01450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023542280.1	8.00e-145	100.00	homeobox-leucine zipper protein HAT5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022944974.1	5.40e-143	98.58	homeobox-leucine zipper protein HAT5-like [Cucurbita moschata]	[more]
KAG6574110.1	6.31e-142	97.63	Homeobox-leucine zipper protein ATHB-54, partial [Cucurbita argyrosperma subsp. ...	[more]
KAG7013170.1	2.57e-141	97.63	Homeobox-leucine zipper protein HAT5, partial [Cucurbita argyrosperma subsp. arg...	[more]
XP_022968264.1	8.58e-133	90.45	homeobox-leucine zipper protein HAT5-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG09g01450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZN4	2.62e-143	98.58	homeobox-leucine zipper protein HAT5-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1HZ57	4.15e-133	90.45	homeobox-leucine zipper protein HAT5-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1DBJ2	7.88e-60	54.88	homeobox-leucine zipper protein ATHB-16 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1GYD2	4.62e-59	53.60	homeobox-leucine zipper protein ATHB-16-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A5D3CVI2	4.58e-58	54.81	Homeobox-leucine zipper protein ATHB-16 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Cp4.1LG09g01450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01470.1	5.6e-25	42.86	homeobox 1	[more]
AT1G27045.1	1.6e-24	56.73	Homeobox-leucine zipper protein family	[more]
AT4G40060.1	6.8e-23	50.94	homeobox protein 16	[more]
AT1G26960.1	1.2e-22	52.58	homeobox protein 23	[more]
AT2G22430.1	1.5e-22	41.40	homeobox protein 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 104..145
None	No IPR available	GENE3D	1.10.10.60		coord: 36..100 e-value: 4.8E-19 score: 69.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..42
None	No IPR available	PANTHER	PTHR24326:SF575	HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT5-LIKE	coord: 36..173
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 36..173
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 69..78 score: 31.07 coord: 78..94 score: 58.88
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 41..102 e-value: 1.6E-17 score: 74.2
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 43..96 e-value: 2.6E-16 score: 59.2
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 38..98 score: 16.616802
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 43..99 e-value: 2.22861E-15 score: 65.7276
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 103..138 e-value: 1.7E-9 score: 37.7
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 73..96
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 22..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g01450.1	Cp4.1LG09g01450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding