Cp4.1LG09g00980 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g00980
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	flap endonuclease GEN-like 2
Location	Cp4.1LG09: 539630 .. 545296 (-)
RNA-Seq Expression	Cp4.1LG09g00980
Synteny	Cp4.1LG09g00980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTACCTTATCCTTTTTGCCACTCTTCCTCACTTTGACCTTCACCGTCCAGCCAGGGGGTAGCCATTCCTCCGACTTCTGGTTCATCATTCAGACTTTCCGGCGAAACCCACCGGCCAATCTCAATAACCCTCTTTCCCCTCTATGTTTTTCTCTCTTTTGGGCTCGCCAAGAGTCTGATTTTGGTGTCAAATCCCTTCAGGAGGCTATAAAAATGAAGGATTCCGACACAATATTCTTTCTAACCACGTGTTCTGAGAAGCACCCTGCGAGGCATATAAACGTGTCGGACCCCATTCATTATCCTCTACAACTCTCCCCTTTCACATTTGACTACGACCCTCTTTTCTGGATCTTACGATTGTTCTTTACACCCATCTGTAAGTTCAAAACGTAACTCGATTCAAATGTACCGCCGATTGAAGTGGAGGACTATGGCAACGTATCTGGGAGTAAAGCAGAGGATTGAAACCGCTAGAGGTTCCAATAACGTCTGCTGTAACGGAAGAGTAAAGGGGAAATATCGAAGCTTTTAATAAGCTTTAAGAGCGGAGGAATAAGTTCTAGATTTGAAAAAAGAGCGGGCTGTTCTGGGTAATGGGTATATCTGCAAAGTGGAAAGTGGAACCCTTTCTTTGGTTTCAAAAGTGAAAGAAACTTCATAATTTGTTTTTGGAACTAATTATGGAACTTTAACCCCCAAAAGAATTTGTTTTTGAAAACAAGACGTGGGTTTTGAGCCACTGCCACAATAATATTAAAACAAAACGAAATCCCTTTATTCTCTTTTCATTTTTCATTTCATTTCTTAAAAGAAAAGCGAAAACTAAGAAATCAAGGACCCCCACAAGCCGAAACCTCTCCGCGGGAGAAATGGGGGTAAAGAACTTGTGGGATATCTTAGAATCGTGCAAGAAAACTCTCCCACTTCATCGTCTTCAGTAAGTGTTTTCCTTCATTTTCTCGGCAACCAAACAGGGGATTTGTATCTGTATTCTTCTTTTGAGTTTTTGGGATTTTGAATTGGGGTTCAGGAATAAGCGGCTATGCATCGATCTCTCGTGTTGGATGGTTCAGCTTCAAAATGTAAGCAAATCGCATTCTTGTCTGAACCAGAAGATTTACCTGAAAGGGCTCTTTCACCGCCTTCGAGCGCTCATTGCCTTGAATTGCAGCCTTATTTTCGTTACAGGCATGCTCCACATGAAACTACACAGCTATTATGAACAACAAATGATGGGCTCTCGTTTAATTTTGCTTTCTTTTTGCTGTTTGTAGATGGTTCAATTCCTGGCATCAAACTTTCAACTTATAGACGCCGTTTGAACAATGGAAGTGAGGTGGGAATTCTCATAACCCACTTTCGTTTCATTTCTCCTTTTTACTTGAATGTTACTTACCAAAGATGCAACACGACAGGTTGTTAAAAATGACACAAATTCCCAGCAAATATCCTCACTGAAAAGAAACAAGGGTTCTGAGTTCTCTTTAATGATCAAAGAGGCAAAAGCCTTAGGACTGACGCTTGGTATCCCTTGTCTAGATGGGTAAATGCTTTGTTCATTAAATTTTCAATCAGAAGCTTATGGTTTTCTGTCTCCTGAGCACTTGAATCTTTTTGCATATACCTCTGAATGTAGGCTCGAGGAAGGGGAAGCACAATGTGCATTACTAAATTCAGAGCTATTATGTGTAAGTTGAGTCTTAGTTATAATGTTTGAGTGCTCCACATGCTTATTGCTTTTGCATCTCTGTTGTCTTGAACATCATTGCTATTATTAAAGCATCATTTTCTGATCAGGATGGATGTTTTACTTCAGATTCAGATGTTTTCCTTTTTGGTGCTAGGACGGTATATAGGGACATAGGCCTTGGTGAGTGTCCTAGAGCATGCTCAGTTTCTGTAGAGTTGGTTTATGGTTTTAAAAGATATACTCATTATTCTTATTATTTGTTGTTAAATTAGGAGATGGTGGTCATGTAGTGTGTTATGAAATGGATGACATTGAAAGACAATTGGGCTTTGGAAGGAACTCGATGGTAATTTTCTTGTTTTTTGTTTTTCGGCGTCTACATTTCGAACAATGTATGATTTAAGAGAGTGGAGTGTTTTTGTGAGATCTCACATTGGTTGGAGAGGTGAATGAATCATTTTTTATAAGGGTGTGGAAACCTCTCCCTAACATATGCGTTTTAAAACCTTGAGGGGAAGCCTAGAAGGGAAAGCCTGGAGAAGACAATATCTGCTAGTGGTGGGCTTGGGCTGTTACAAATGGTATCAAAATCAGACACTGGGTAGTGTGCCAGCGAGAACGCTGGCCCCCCAGGGGTGGATTGTGAGATTCCACATTGGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTGACAAATGCATTTTAAAACTTCGAGGGAAAGCCTGGAAAGGAAAGACCAAAGAGGACAATATCTGCTAGTGGTGGACTTGGGCAGTTACAAATGGTATCAGAGCCAGACATCAGGAACTGTGCCAACGTTGAGGTGGATTGTGAGATTCCACATTGGTTGGAGAGGAGAACGAAGCATTCTTTGTAAGGGTGTGGAAACCTCTCCCTGACAAATGCATTTTAAAACCTTGAGGGAAAGCCTGGAAAGGAAAGACCAAAGAGGACAATATCTACTAGTGGTGGGCCTGGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGACACCAGGTAGTGTGCCAGTGTTCCCCAAGGGGGTGGATTGTGAGATTCCACATTGGTTGGAGAGGAGAACGAAGCATTATTTATAAGGATGTGGAAACCTCTCCCTGACAAATGTATTTTAAAACCTTGAGGGAAAGCTTGCTAGTGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGACACCGGGTAGTATGGCGGCGAGGACGTTGGGCCCCCAATGAGGGTGGACTGTGAGATCCCACATTGTTTGGAGAGGGGAACAAAGCATTCTTTATAAGGTGTGGAAACCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCTAACAGACGCGTTTTAAAACCTTGAAGGGAAGCTCGGAAGGGAAAGATCAAATAGGACGATATTGGCTAGCAGTGGGTTTGGGCTGTTACAAATGGTATTAGAGCCAGACACCGGAGAATGTGCCAACGAGTATACTGGGTCCCCAAGGGGGGTGGATTGTGAGATCCCACATTTGTTGGAGAGGGGAACAAATTCTTTATAAGAGTGTGAAAACATCTCCTTAACAGAAGCGTTTAAAACTTTGAGTGGAAGTCCGGAAGGAAAAGACCAAATAGGACAATATCTGCTAGCGGTGGGCTTAGGCTGTTACGATGTTTCACTTGAAAGATGAGCTTTTCTCTTTCTATGATCAAATATGTTATCATTACCGAATCATTTTGTGATTTCCAGATTGCTTTGGCCCTACTTCTTGGCAGTGACTACTCGCAAGGCGTTTATGGCATGGGTCGTGTAGGTTTCAACTCCTGTTTTTCTCTGTTGGATTGCTTTTTATACTAACAATTCGACTGCAGCATGTAACTATGTCTATGCTGTTTTTGTACACTTCGTAGGAATCTGCTTGTCAGATTGTTAAAGCAGTAGGAGATAGCACTGTCCTTCAAAAAATTGCATCTGAAGGACTGTCTTTCACAAAGAAGGGGAAAAATTCCAAGAAGCCAGGACTTCGTAATTCTGGTCATATTACTTCTATCAAGCTTCATTCTCCTTTTTCAACACTAAAAGAAGTGGAATAGGGGAATTTGAGCCTTGGATATAAACTAAAAAACAACCTTCTTAGCCTCACTAGTGGGCTTAGGAACTTAAATAGTGCAGTTTTGATACTATTCTGATATGATAGGTCAATCAAGTTTTGATTTGTGATGTGGGTTACTTTGGTTTGGTTGTACAGGGGATGGGCAGTACATGCATAAATGTGAGGAGTTTTCACAAGTCATTGATGCCTATTTGAGACCCAAATGCCATTCGGCTGATTCTGATGCTGTGACTAGGTGAGCTTGTTGAACCTTTGGAATTACATTACAAATAGTTCTGTACTCTGTGTTTGCAAGAGTCTTTCTTTGTGAGAGATCCCACGTTGGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTATAGAAATCTCTCCCTAGAAAATGCGTTTTAAAACCGTGAGGTTGATGGTGATACATAACGGGCCAAAGCGGACAATATTTGTTAGCAGTGGGCTTCGTTTACTTCGAGGCTTGTAATTTTGTGTCAGATTGATATTTACACGATTAGTCTTCGAACTTTCCTTTTTGCAATGTATGTAGATTTTGTGAAATTCATATGCCTTCAGCACTTTTTTTTCTCTCTACAGGGTTCTTATTCAGCATTCTTTTCAACGTGCCAAGCTTCAGCAGTTCTGTGCCGAATTTTTTGCTTGGCCTCCTGAGAAAACAGGTTCTTTTTTTTTGCTTCATCTTTGGAGCTAACTAGAAAATGGTTCGTTTAGCTTGTGAATAACCCATGCATGGTTCAGATGAGTACATTCTTCCAAAGATAGCAGAAAAAGATCTACGACGATTTGCTAATCTTCGTTCGAACACATCAAACCTCGGTTTCAACATTCCACTTCAAGAAGTATGTTTATTTCTTCAAGAGGTACTTTTATCAGTTGTTACTGATATGGATACTGTTTGATTGCGTTTTTTTTATTACAGGTACCTGTAAGTTGTCCTGTTTCTGGAATCGTCAAGCACCGAAAAGTCCAGGGGAACGAATGCTATGAGGTTTCATGGAAAAATTTAGATGGGCTTAGTTCATCTGTTGTACCAGCAGATCTCTTGCAGAGGTATGGAGTGTCCTTACATAATTTCTTCTATAACAAATGACGATTTGGATACTTCACAACTATTTCTTTTTTAATATTTCACAGTGCCTGTCCGGAGATGATTGTAGAATTTGAAGAGCAAAGAGCTCAAGGAAGAAAACCAAATAAGTGCAGAACAAAAACAAAGAAGTCAGAGGCTACTGTGGCTGAAATTGATGAAAGATTCCAAACTCTGTTGCTTGAAATTGAATCTGAAAGCAGGGCAGTTCGTAATCTTTCCCAAGCTCCAATAGTTTCGGAAAACAGTAACTCTGCTACTGGTTTGGATGAGTTGCAAGATATTATTCTTGACGTCGAACCAACCATTGTTGATCATGCTCACGGTACAGAGAACGTTGAGGTCATCGATCTCTTAAGCCCTTCACCTGCAATTCAAACCTGCAAATTTCGACAGGGAAACTGTGAAAAGATTGATGTAATTGATTTGAGTGACACAGAAAATGATCAGTCACCTGAACATGAGAGAAAAGCAAGAGAGTTGAGATTGTTCTTAGCCTCCTTAAAGGGTAAATGACTTCCTCTGAAGGGCCAAAAATGTATTATGTATATTGCAATGAAATGTGTAACACTACGGAAGGAATTAGGATTTAGAATCTGGTTTTTAAATATTGTTTGCTTTGACCCG

mRNA sequence

AGTACCTTATCCTTTTTGCCACTCTTCCTCACTTTGACCTTCACCGTCCAGCCAGGGGGTAGCCATTCCTCCGACTTCTGGTTCATCATTCAGACTTTCCGGCGAAACCCACCGGCCAATCTCAATAACCCTCTTTCCCCTCTATGTTTTTCTCTCTTTTGGGCTCGCCAAGAGTCTGATTTTGGTGTCAAATCCCTTCAGGAGGCTATAAAAATGAAGGATTCCGACACAATATTCTTTCTAACCACGTGTTCTGAGAAGCACCCTGCGAGGCATATAAACGTGTCGGACCCCATTCATTATCCTCTACAACTCTCCCCTTTCACATTTGACTACGACCCTCTTTTCTGGATCTTACGATTGTTCTTTACACCCATCTGTAAGTTCAAAACGTAACTCGATTCAAATGTACCGCCGATTGAAGTGGAGGACTATGGCAACGTATCTGGGAGTAAAGCAGAGGATTGAAACCGCTAGAGGTTCCAATAACGTCTGCTGTAACGGAAGAGTAAAGGGGAAATATCGAAGCTTTTAATAAGCTTTAAGAGCGGAGGAATAAGTTCTAGATTTGAAAAAAGAGCGGGCTGTTCTGGGTAATGGGTATATCTGCAAAGTGGAAAGTGGAACCCTTTCTTTGGTTTCAAAAGTGAAAGAAACTTCATAATTTGTTTTTGGAACTAATTATGGAACTTTAACCCCCAAAAGAATTTGTTTTTGAAAACAAGACGTGGGTTTTGAGCCACTGCCACAATAATATTAAAACAAAACGAAATCCCTTTATTCTCTTTTCATTTTTCATTTCATTTCTTAAAAGAAAAGCGAAAACTAAGAAATCAAGGACCCCCACAAGCCGAAACCTCTCCGCGGGAGAAATGGGGGTAAAGAACTTGTGGGATATCTTAGAATCGTGCAAGAAAACTCTCCCACTTCATCGTCTTCAGAATAAGCGGCTATGCATCGATCTCTCGTATGGTTCAATTCCTGGCATCAAACTTTCAACTTATAGACGCCGTTTGAACAATGGAAGTGAGGTTGTTAAAAATGACACAAATTCCCAGCAAATATCCTCACTGAAAAGAAACAAGGGTTCTGAGTTCTCTTTAATGATCAAAGAGGCAAAAGCCTTAGGACTGACGCTTGGTATCCCTTGTCTAGATGGGCTCGAGGAAGGGGAAGCACAATGTGCATTACTAAATTCAGAGCTATTATGTGATGGATGTTTTACTTCAGATTCAGATGTTTTCCTTTTTGGTGCTAGGACGGTATATAGGGACATAGGCCTTGGAGATGGTGGTCATGTAATTGCTTTGGCCCTACTTCTTGGCAGTGACTACTCGCAAGGCGTTTATGGCATGGGTCGTGAATCTGCTTGTCAGATTGTTAAAGCAGTAGGAGATAGCACTGTCCTTCAAAAAATTGCATCTGAAGGACTGTCTTTCACAAAGAAGGGGAAAAATTCCAAGAAGCCAGGACTTCGTAATTCTGGGGATGGGCAGTACATGCATAAATGTGAGGAGTTTTCACAAGTCATTGATGCCTATTTGAGACCCAAATGCCATTCGGCTGATTCTGATGCTGTGACTAGGGTTCTTATTCAGCATTCTTTTCAACGTGCCAAGCTTCAGCAGTTCTGTGCCGAATTTTTTGCTTGGCCTCCTGAGAAAACAGATGAGTACATTCTTCCAAAGATAGCAGAAAAAGATCTACGACGATTTGCTAATCTTCGTTCGAACACATCAAACCTCGGTTTCAACATTCCACTTCAAGAAGTACCTGTAAGTTGTCCTGTTTCTGGAATCGTCAAGCACCGAAAAGTCCAGGGGAACGAATGCTATGAGGTTTCATGGAAAAATTTAGATGGGCTTAGTTCATCTGTTGTACCAGCAGATCTCTTGCAGAGTGCCTGTCCGGAGATGATTGTAGAATTTGAAGAGCAAAGAGCTCAAGGAAGAAAACCAAATAAGTGCAGAACAAAAACAAAGAAGTCAGAGGCTACTGTGGCTGAAATTGATGAAAGATTCCAAACTCTGTTGCTTGAAATTGAATCTGAAAGCAGGGCAGTTCGTAATCTTTCCCAAGCTCCAATAGTTTCGGAAAACAGTAACTCTGCTACTGGTTTGGATGAGTTGCAAGATATTATTCTTGACGTCGAACCAACCATTGTTGATCATGCTCACGGTACAGAGAACGTTGAGGTCATCGATCTCTTAAGCCCTTCACCTGCAATTCAAACCTGCAAATTTCGACAGGGAAACTGTGAAAAGATTGATGTAATTGATTTGAGTGACACAGAAAATGATCAGTCACCTGAACATGAGAGAAAAGCAAGAGAGTTGAGATTGTTCTTAGCCTCCTTAAAGGGTAAATGACTTCCTCTGAAGGGCCAAAAATGTATTATGTATATTGCAATGAAATGTGTAACACTACGGAAGGAATTAGGATTTAGAATCTGGTTTTTAAATATTGTTTGCTTTGACCCG

Coding sequence (CDS)

ATGGGGGTAAAGAACTTGTGGGATATCTTAGAATCGTGCAAGAAAACTCTCCCACTTCATCGTCTTCAGAATAAGCGGCTATGCATCGATCTCTCGTATGGTTCAATTCCTGGCATCAAACTTTCAACTTATAGACGCCGTTTGAACAATGGAAGTGAGGTTGTTAAAAATGACACAAATTCCCAGCAAATATCCTCACTGAAAAGAAACAAGGGTTCTGAGTTCTCTTTAATGATCAAAGAGGCAAAAGCCTTAGGACTGACGCTTGGTATCCCTTGTCTAGATGGGCTCGAGGAAGGGGAAGCACAATGTGCATTACTAAATTCAGAGCTATTATGTGATGGATGTTTTACTTCAGATTCAGATGTTTTCCTTTTTGGTGCTAGGACGGTATATAGGGACATAGGCCTTGGAGATGGTGGTCATGTAATTGCTTTGGCCCTACTTCTTGGCAGTGACTACTCGCAAGGCGTTTATGGCATGGGTCGTGAATCTGCTTGTCAGATTGTTAAAGCAGTAGGAGATAGCACTGTCCTTCAAAAAATTGCATCTGAAGGACTGTCTTTCACAAAGAAGGGGAAAAATTCCAAGAAGCCAGGACTTCGTAATTCTGGGGATGGGCAGTACATGCATAAATGTGAGGAGTTTTCACAAGTCATTGATGCCTATTTGAGACCCAAATGCCATTCGGCTGATTCTGATGCTGTGACTAGGGTTCTTATTCAGCATTCTTTTCAACGTGCCAAGCTTCAGCAGTTCTGTGCCGAATTTTTTGCTTGGCCTCCTGAGAAAACAGATGAGTACATTCTTCCAAAGATAGCAGAAAAAGATCTACGACGATTTGCTAATCTTCGTTCGAACACATCAAACCTCGGTTTCAACATTCCACTTCAAGAAGTACCTGTAAGTTGTCCTGTTTCTGGAATCGTCAAGCACCGAAAAGTCCAGGGGAACGAATGCTATGAGGTTTCATGGAAAAATTTAGATGGGCTTAGTTCATCTGTTGTACCAGCAGATCTCTTGCAGAGTGCCTGTCCGGAGATGATTGTAGAATTTGAAGAGCAAAGAGCTCAAGGAAGAAAACCAAATAAGTGCAGAACAAAAACAAAGAAGTCAGAGGCTACTGTGGCTGAAATTGATGAAAGATTCCAAACTCTGTTGCTTGAAATTGAATCTGAAAGCAGGGCAGTTCGTAATCTTTCCCAAGCTCCAATAGTTTCGGAAAACAGTAACTCTGCTACTGGTTTGGATGAGTTGCAAGATATTATTCTTGACGTCGAACCAACCATTGTTGATCATGCTCACGGTACAGAGAACGTTGAGGTCATCGATCTCTTAAGCCCTTCACCTGCAATTCAAACCTGCAAATTTCGACAGGGAAACTGTGAAAAGATTGATGTAATTGATTTGAGTGACACAGAAAATGATCAGTCACCTGAACATGAGAGAAAAGCAAGAGAGTTGAGATTGTTCTTAGCCTCCTTAAAGGGTAAATGA

Protein sequence

MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSYGSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDIGLGDGGHVIALALLLGSDYSQGVYGMGRESACQIVKAVGDSTVLQKIASEGLSFTKKGKNSKKPGLRNSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTRVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTSNLGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDERFQTLLLEIESESRAVRNLSQAPIVSENSNSATGLDELQDIILDVEPTIVDHAHGTENVEVIDLLSPSPAIQTCKFRQGNCEKIDVIDLSDTENDQSPEHERKARELRLFLASLKGK

Homology

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BLAST of Cp4.1LG09g00980 vs. ExPASy Swiss-Prot
Match: Q9M2Z3 (Single-strand DNA endonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=SEND1 PE=1 SV=2)

HSP 1 Score: 450.3 bits (1157), Expect = 2.9e-125
Identity = 261/601 (43.43%), Postives = 357/601 (59.40%), Query Frame = 0


Query: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSY--------------------------- 60
           MGVK LWD+LE CKKT PL  LQNKR+C+DLS                            
Sbjct: 1   MGVKYLWDVLEPCKKTFPLDHLQNKRVCVDLSCWMVELHKVNKSYCATKEKVYLRGFFHR 60

Query: 61  ----------------GSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL 120
                           G+IPGIK+ TY+RRL    E+  +     + +SLKRN GSEFS 
Sbjct: 61  LRALIALNCSIILVSDGAIPGIKVPTYKRRLKARFEIADDGVEPSKETSLKRNMGSEFSC 120

Query: 121 MIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDIGL 180
           +IKEAK +  TLGI CLDG+EE EAQCALLNSE LCD CF+ DSD+FLFGA+TVYR+I L
Sbjct: 121 IIKEAKVIASTLGILCLDGIEEAEAQCALLNSESLCDACFSFDSDIFLFGAKTVYREICL 180

Query: 181 GDGGHV-------------------IALALLLGSDYSQGVYGMGRESACQIVKAVGDSTV 240
           G+GG+V                   IALALLLGSDYSQGV G+ +E AC++V+++GD+ +
Sbjct: 181 GEGGYVVCYEMDDIKKKLGLGRNSLIALALLLGSDYSQGVRGLRQEKACELVRSIGDNVI 240

Query: 241 LQKIASEGLSFTKKGKNSKK-------------PGLRNSGDGQYMHKCEEFSQVIDAYLR 300
           L+K+ASEGLSF +K + SKK             P +  +G+ +   + EE  QVIDA++ 
Sbjct: 241 LEKVASEGLSFAEKPRKSKKQVRPSVCSKKGTLPLVVINGNNRDPERLEEIKQVIDAFMN 300

Query: 301 PKCHSADSDAVTRVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLR 360
           PKCH ADS+ V+R L + SFQR KLQ+ C +FF WPPEKTDEYILPK+AE++LRRFANL+
Sbjct: 301 PKCHQADSNTVSRALAEFSFQRTKLQEICHQFFEWPPEKTDEYILPKVAERNLRRFANLQ 360

Query: 361 SNTSNLGFNIPLQ--EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQS 420
           S ++ +  N+PL   ++P  CPVS I+K RKVQG EC+EVSW +L+GL SS+VPADL++ 
Sbjct: 361 SRSTEVEVNLPLHKPQMPEKCPVSEIIKTRKVQGRECFEVSWNDLEGLESSIVPADLVER 420

Query: 421 ACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAE---IDERFQTLLLEIESESRAVRN- 480
           ACPE I+EF+E+ A  +K  K + K K++ +       ++   +   L++ S S   R+ 
Sbjct: 421 ACPEKIIEFKEKMAAKKKKPKPKQKQKETSSPTKSSSLVELSLELQHLDLNSTSLVSRST 480

Query: 481 LSQAPIVSENSNSATGLDELQDIILDVEPTIVDHAHGT-----------------ENVEV 497
           L +A   +E  NS     +  D +  ++    ++ +                      EV
Sbjct: 481 LEEAEQENEQQNS-----KKHDYLRLIDSPDRENCNNAWSNRDRLGVGMSSFPLYPETEV 540

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BLAST of Cp4.1LG09g00980 vs. ExPASy Swiss-Prot
Match: Q8W5R1 (Single-strand DNA endonuclease 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SEND1 PE=2 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 1.3e-122
Identity = 241/469 (51.39%), Postives = 298/469 (63.54%), Query Frame = 0


Query: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSY--------------------------- 60
           MGVKNLWDILESCKK LPLH LQNK++C+DLS                            
Sbjct: 1   MGVKNLWDILESCKKKLPLHHLQNKKVCVDLSCWLVQMYSANRSPAFAKDKVYLKNLFHR 60

Query: 61  ----------------GSIPGIKLSTYRRRLNNGSEVVK--NDTNSQQISSLKRNKGSEF 120
                           G+IP +KL+TYRRRL + S   K  +  NS    SL+RNKGSEF
Sbjct: 61  IRALLALNCTLLFVTDGAIPSLKLATYRRRLGSISHAAKESDQPNSHPSISLRRNKGSEF 120

Query: 121 SLMIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDI 180
           S MIKEAK LG+ LGIPCLDGLEE EAQCA L+ E LCDGCFTSDSD FLFGARTVYRD+
Sbjct: 121 SCMIKEAKRLGMALGIPCLDGLEEAEAQCASLDLESLCDGCFTSDSDAFLFGARTVYRDV 180

Query: 181 GLGDGGHV-------------------IALALLLGSDYSQGVYGMGRESACQIVKAVGDS 240
            +G+GG+V                   I+LA+LLGSDYS GV G G E+AC++VK+VGD+
Sbjct: 181 FIGEGGYVICYEMEDIEKTLGFGRNSLISLAVLLGSDYSNGVNGFGPETACRLVKSVGDN 240

Query: 241 TVLQKIASEGLSFTK--KGKNSKK------PGLRNSGDGQYMHKCEEFSQVIDAYLRPKC 300
            +L +I S G+  T+  KGKNS        P   +   G       +F  VI+AYL PKC
Sbjct: 241 LILDQILSNGVKATRKCKGKNSGNKVDDMCPKASSCEVGMTQDSDGQFRDVINAYLEPKC 300

Query: 301 HSADSDAVTRVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNT 360
           HS DS+AV RV  QH F R +LQ+ C E+F W PEKTD+YILPKIAE++LRRF++LRS +
Sbjct: 301 HSPDSEAVQRVCGQHPFLRPQLQKICEEYFDWSPEKTDQYILPKIAERELRRFSDLRSAS 360

Query: 361 SNLGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEM 398
           S LG    L E+PV CPV  IVK RKV GNECYEVSW+N++GL  SVVP DL++SACPE 
Sbjct: 361 SALGIKPLLSEIPVPCPVLAIVKQRKVHGNECYEVSWRNIEGLQVSVVPGDLVKSACPEK 420

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BLAST of Cp4.1LG09g00980 vs. ExPASy Swiss-Prot
Match: Q9ATY5 (DNA repair protein UVH3 OS=Arabidopsis thaliana OX=3702 GN=UVH3 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 4.7e-19
Identity = 92/294 (31.29%), Postives = 121/294 (41.16%), Query Frame = 0


Query: 67   LKRNKGSEFSLMIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLF 126
            L+RN  S  S M  E + L    GIP +    E EAQCA +    L DG  T DSDVFLF
Sbjct: 914  LERNAESVSSEMFAECQELLQIFGIPYIIAPMEAEAQCAFMEQSNLVDGIVTDDSDVFLF 973

Query: 127  GARTVYRDI-------------------GLGDGGHVIALALLLGSDYSQGVYGMGRESAC 186
            GAR+VY++I                   GL     +I +A+LLGSDY++G+ G+G  +A 
Sbjct: 974  GARSVYKNIFDDRKYVETYFMKDIEKELGL-SRDKIIRMAMLLGSDYTEGISGIGIVNAI 1033

Query: 187  QIVKAVGDSTVLQKIAS---------EGLSFTKKGKNSKKPG---LRNSG--DGQYMHKC 246
            ++V A  +   LQK             G +  K G   KK G   + N G   G      
Sbjct: 1034 EVVTAFPEEDGLQKFREWVESPDPTILGKTDAKTGSKVKKRGSASVDNKGIISGASTDDT 1093

Query: 247  EEFSQ-----------------------VIDAYLRPKCHSADSDAVTRVLIQHSFQRAKL 291
            EE  Q                       VI AYL P+      D  T          + L
Sbjct: 1094 EEIKQIFMDQHRKVSKNWHIPLTFPSEAVISAYLNPQV-----DLSTEKFSWGKPDLSVL 1153

[Close]

BLAST of Cp4.1LG09g00980 vs. ExPASy Swiss-Prot
Match: P07276 (DNA repair protein RAD2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RAD2 PE=1 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 1.3e-16
Identity = 80/263 (30.42%), Postives = 119/263 (45.25%), Query Frame = 0


Query: 41  LSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLTLGIPCLDGLEEG 100
           LST   R    +  V+++   QQ+   KR+       MIKE + L    GIP +    E 
Sbjct: 735 LSTSAERNVAENAFVEDELFEQQMKD-KRDSDEVTMDMIKEVQELLSRFGIPYITAPMEA 794

Query: 101 EAQCALLNSELLCDGCFTSDSDVFLFGARTVYRD-------------------IGLGDGG 160
           EAQCA L    L DG  T DSDVFLFG   +Y++                   +GL D  
Sbjct: 795 EAQCAELLQLNLVDGIITDDSDVFLFGGTKIYKNMFHEKNYVEFYDAESILKLLGL-DRK 854

Query: 161 HVIALALLLGSDYSQGVYGMGRESACQIVKAVGDSTVLQKIASEGLSFTKKGKNSKK--P 220
           ++I LA LLGSDY+ G+ GMG  S+ +++   G+    +   + G    +K +   K   
Sbjct: 855 NMIELAQLLGSDYTNGLKGMGPVSSIEVIAEFGNLKNFKDWYNNGQFDKRKQETENKFEK 914

Query: 221 GLRNSGDGQYMHKCEEFSQVI--DAYLRPKCHSADSDAVTRVLIQHSFQRAKLQQFCAEF 280
            LR       +   ++F  V+  DAY+RP     + D  T   +        L+ F    
Sbjct: 915 DLRKKLVNNEIILDDDFPSVMVYDAYMRP-----EVDHDTTPFVWGVPDLDMLRSFMKTQ 974

[Close]

BLAST of Cp4.1LG09g00980 vs. ExPASy Swiss-Prot
Match: Q17RS7 (Flap endonuclease GEN homolog 1 OS=Homo sapiens OX=9606 GN=GEN1 PE=1 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 1.7e-16
Identity = 70/237 (29.54%), Postives = 109/237 (45.99%), Query Frame = 0


Query: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLS------------YGSI--PGIKLSTYRR 60
           MGV +LW ILE  K+ +PL  L  K + +DLS             GS+  P ++   +R 
Sbjct: 1   MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFRI 60

Query: 61  RLNNGSEV------------VKNDTNSQQISSLKRNKG---------SEFSLMIKEAKAL 120
                 +V            +K D  S++  S   + G         S F  +++E   +
Sbjct: 61  SYLTQMDVKLVFVMEGEPPKLKADVISKRNQSRYGSSGKSWSQKTGRSHFKSVLRECLHM 120

Query: 121 GLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDIGLG------- 180
              LGIP +    E EA CA LN+    DGC T+D D FL+GA+TVYR+  +        
Sbjct: 121 LECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPHVD 180

Query: 181 -------------DGGHVIALALLLGSDY-SQGVYGMGRESACQIVKAVGDSTVLQK 182
                        D   ++ LA+LLG DY  +GV G+G+E A ++++ +   ++LQ+
Sbjct: 181 CYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLIQILKGQSLLQR 237

[Close]

BLAST of Cp4.1LG09g00980 vs. NCBI nr
Match: XP_023541410.1 (flap endonuclease GEN-like 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 949 bits (2453), Expect = 0.0
Identity = 497/560 (88.75%), Postives = 497/560 (88.75%), Query Frame = 0


Query: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSY--------------------------- 60
           MGVKNLWDILESCKKTLPLHRLQNKRLCIDLS                            
Sbjct: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSCWMVQLQNVSKSHSCLNQKIYLKGLFHR 60

Query: 61  ----------------GSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL 120
                           GSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL
Sbjct: 61  LRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL 120

Query: 121 MIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDIGL 180
           MIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDIGL
Sbjct: 121 MIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDIGL 180

Query: 181 GDGGHV-------------------IALALLLGSDYSQGVYGMGRESACQIVKAVGDSTV 240
           GDGGHV                   IALALLLGSDYSQGVYGMGRESACQIVKAVGDSTV
Sbjct: 181 GDGGHVVCYEMDDIERQLGFGRNSMIALALLLGSDYSQGVYGMGRESACQIVKAVGDSTV 240

Query: 241 LQKIASEGLSFTKKGKNSKKPGLRNSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTR 300
           LQKIASEGLSFTKKGKNSKKPGLRNSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTR
Sbjct: 241 LQKIASEGLSFTKKGKNSKKPGLRNSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTR 300

Query: 301 VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTSNLGFNIPLQ 360
           VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTSNLGFNIPLQ
Sbjct: 301 VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTSNLGFNIPLQ 360

Query: 361 EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ 420
           EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ
Sbjct: 361 EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ 420

Query: 421 GRKPNKCRTKTKKSEATVAEIDERFQTLLLEIESESRAVRNLSQAPIVSENSNSATGLDE 480
           GRKPNKCRTKTKKSEATVAEIDERFQTLLLEIESESRAVRNLSQAPIVSENSNSATGLDE
Sbjct: 421 GRKPNKCRTKTKKSEATVAEIDERFQTLLLEIESESRAVRNLSQAPIVSENSNSATGLDE 480

Query: 481 LQDIILDVEPTIVDHAHGTENVEVIDLLSPSPAIQTCKFRQGNCEKIDVIDLSDTENDQS 498
           LQDIILDVEPTIVDHAHGTENVEVIDLLSPSPAIQTCKFRQGNCEKIDVIDLSDTENDQS
Sbjct: 481 LQDIILDVEPTIVDHAHGTENVEVIDLLSPSPAIQTCKFRQGNCEKIDVIDLSDTENDQS 540

[Close]

BLAST of Cp4.1LG09g00980 vs. NCBI nr
Match: XP_022944807.1 (flap endonuclease GEN-like 2 [Cucurbita moschata])

HSP 1 Score: 911 bits (2355), Expect = 0.0
Identity = 482/563 (85.61%), Postives = 490/563 (87.03%), Query Frame = 0


Query: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSY--------------------------- 60
           MGVKNLWDILESCKKTLPLHRLQNKRLCIDLS                            
Sbjct: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSCWMVQLQNVSKSHSCLNQKIYLKGLFHR 60

Query: 61  ----------------GSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL 120
                           GSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL
Sbjct: 61  LRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL 120

Query: 121 MIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDIGL 180
           MIKEAKALGL LGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDI L
Sbjct: 121 MIKEAKALGLALGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDICL 180

Query: 181 GDGGHV-------------------IALALLLGSDYSQGVYGMGRESACQIVKAVGDSTV 240
           GDGGHV                   IALALLLGSDY+QGVYGMGRESA QIVK VGDSTV
Sbjct: 181 GDGGHVVCYEMDDIEGQLGFGRNSMIALALLLGSDYTQGVYGMGRESARQIVKTVGDSTV 240

Query: 241 LQKIASEGLSFTKKGKNSKKPGLRNSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTR 300
           LQKIASEGLS+T KGKNSKKPGL NSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTR
Sbjct: 241 LQKIASEGLSYTMKGKNSKKPGLPNSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTR 300

Query: 301 VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTSNLGFNIPLQ 360
           VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTS+LGFNIPLQ
Sbjct: 301 VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTSDLGFNIPLQ 360

Query: 361 EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ 420
           EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ
Sbjct: 361 EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ 420

Query: 421 GRKPNKCRTKTKKSEATVAEIDERFQTLLLEIESESRAVRNLSQAPIVSENSNSATGLDE 480
           GRKPNKCRTKTKKSEATVAEIDERF+TLLLEIESESRAVRNLSQAPIVSENSNSATGLD+
Sbjct: 421 GRKPNKCRTKTKKSEATVAEIDERFRTLLLEIESESRAVRNLSQAPIVSENSNSATGLDD 480

Query: 481 LQDIILDVEPTIVDHAHGTENVEVIDLLSPSPAIQT---CKFRQGNCEKIDVIDLSDTEN 498
           LQ+IILDVEPTIVDHAHGTENVEVI+LLSPSPAIQT    KF+QGNCEKIDVIDLSDTEN
Sbjct: 481 LQEIILDVEPTIVDHAHGTENVEVINLLSPSPAIQTRKVSKFQQGNCEKIDVIDLSDTEN 540

[Close]

BLAST of Cp4.1LG09g00980 vs. NCBI nr
Match: KAG6574173.1 (Flap endonuclease GEN-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 909 bits (2350), Expect = 0.0
Identity = 481/563 (85.44%), Postives = 490/563 (87.03%), Query Frame = 0


Query: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSY--------------------------- 60
           MGVKNLWDILESCKKTLPLHRLQNKRLCIDLS                            
Sbjct: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSCWMVQLQNVSKSHSCLNQKIYLKGLFHR 60

Query: 61  ----------------GSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL 120
                           GSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL
Sbjct: 61  LRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL 120

Query: 121 MIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDIGL 180
           MIKEAKALGL LGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDI L
Sbjct: 121 MIKEAKALGLALGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDICL 180

Query: 181 GDGGHV-------------------IALALLLGSDYSQGVYGMGRESACQIVKAVGDSTV 240
           GDGGHV                   IALALLLGSDY+QGVYGMGRESA QIVK VGDSTV
Sbjct: 181 GDGGHVVCYEMDDIEGQLGFGRNSMIALALLLGSDYTQGVYGMGRESARQIVKTVGDSTV 240

Query: 241 LQKIASEGLSFTKKGKNSKKPGLRNSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTR 300
           LQKIASEGLSFT KGKNSKKPGL +SGDGQYMHKCEEFSQVI+AYLRPKCHSADSDAVTR
Sbjct: 241 LQKIASEGLSFTMKGKNSKKPGLASSGDGQYMHKCEEFSQVINAYLRPKCHSADSDAVTR 300

Query: 301 VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTSNLGFNIPLQ 360
           VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTS+LGFNIPLQ
Sbjct: 301 VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTSDLGFNIPLQ 360

Query: 361 EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ 420
           EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFE+QRAQ
Sbjct: 361 EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEQQRAQ 420

Query: 421 GRKPNKCRTKTKKSEATVAEIDERFQTLLLEIESESRAVRNLSQAPIVSENSNSATGLDE 480
           GRKPNKCRTKTKKSEATVAEIDERF+TLLLEIESESRAVRNLSQAPIVSENSNSATGLD+
Sbjct: 421 GRKPNKCRTKTKKSEATVAEIDERFRTLLLEIESESRAVRNLSQAPIVSENSNSATGLDD 480

Query: 481 LQDIILDVEPTIVDHAHGTENVEVIDLLSPSPAIQT---CKFRQGNCEKIDVIDLSDTEN 498
           LQ+IILDVEPTIVDHAHGTENVEVI+LLSPSPAIQT    KFRQGNCEKIDVIDLSDTEN
Sbjct: 481 LQEIILDVEPTIVDHAHGTENVEVINLLSPSPAIQTRKVSKFRQGNCEKIDVIDLSDTEN 540

[Close]

BLAST of Cp4.1LG09g00980 vs. NCBI nr
Match: XP_022968219.1 (flap endonuclease GEN-like 2 [Cucurbita maxima])

HSP 1 Score: 902 bits (2332), Expect = 0.0
Identity = 477/563 (84.72%), Postives = 486/563 (86.32%), Query Frame = 0


Query: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSY--------------------------- 60
           MGVKNLWDILESCKKTLPLHRLQNKRLCIDLS                            
Sbjct: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSCWMVQLQNVSKSHSCLNQKIYLKGLFHR 60

Query: 61  ----------------GSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL 120
                           GSIPGIKLSTY+RRLNNGSEVVKNDTNSQQISSLKRN+GSEFSL
Sbjct: 61  LRALIALNCSLIFVTDGSIPGIKLSTYKRRLNNGSEVVKNDTNSQQISSLKRNQGSEFSL 120

Query: 121 MIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDIGL 180
           MIKEAKALGL LGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDI L
Sbjct: 121 MIKEAKALGLALGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDICL 180

Query: 181 GDGGHV-------------------IALALLLGSDYSQGVYGMGRESACQIVKAVGDSTV 240
           GDGGHV                   I+LALLLGSDYSQGVYGMGRESACQIVK VGDSTV
Sbjct: 181 GDGGHVVCYEMDDIERQLGFGRNSMISLALLLGSDYSQGVYGMGRESACQIVKTVGDSTV 240

Query: 241 LQKIASEGLSFTKKGKNSKKPGLRNSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTR 300
           LQKIASEGLSFTKKGKNSKK GL NSGDGQ+MHKCEEFSQVIDAYLRPKCHSADSDAVTR
Sbjct: 241 LQKIASEGLSFTKKGKNSKKSGLPNSGDGQFMHKCEEFSQVIDAYLRPKCHSADSDAVTR 300

Query: 301 VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTSNLGFNIPLQ 360
           VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNT+ LGFNIPLQ
Sbjct: 301 VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTAGLGFNIPLQ 360

Query: 361 EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ 420
           EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ
Sbjct: 361 EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ 420

Query: 421 GRKPNKCRTKTKKSEATVAEIDERFQTLLLEIESESRAVRNLSQAPIVSENSNSATGLDE 480
           GRKPNKC+TKTKKSEATVAEID+RFQTLLLEIESESRAVRNLSQAPIVSENSNSATGLDE
Sbjct: 421 GRKPNKCKTKTKKSEATVAEIDKRFQTLLLEIESESRAVRNLSQAPIVSENSNSATGLDE 480

Query: 481 LQDIILDVEPTIVDHAHGTENVEVIDLLSPSPAIQTCK---FRQGNCEKIDVIDLSDTEN 498
           LQDII DVEPTIVDHAHGTE VEVI+LLSPSPAIQT K   F+QGNCEKIDVIDLSDTEN
Sbjct: 481 LQDIIFDVEPTIVDHAHGTEIVEVINLLSPSPAIQTRKVPKFQQGNCEKIDVIDLSDTEN 540

[Close]

BLAST of Cp4.1LG09g00980 vs. NCBI nr
Match: KAG7013227.1 (Flap endonuclease GEN-like 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 792 bits (2046), Expect = 9.33e-286
Identity = 423/480 (88.12%), Postives = 435/480 (90.62%), Query Frame = 0


Query: 29  IDLSYGSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLT 88
           I ++ GSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGL 
Sbjct: 38  IFVTDGSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLA 97

Query: 89  LGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDIGLGD-------GG 148
           LGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDI LG+         
Sbjct: 98  LGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDICLGECPRACEVSV 157

Query: 149 HVIALALLLGSDYSQGVYGMGRESACQIVKAVGDSTVLQKIASEGLSFTKKGKNSKKPGL 208
            +IALALLLGSDY+QGVYGMGRESA QIVK VGDSTVLQKIASEGLSFT KGKNSKKPGL
Sbjct: 158 ELIALALLLGSDYTQGVYGMGRESARQIVKTVGDSTVLQKIASEGLSFTMKGKNSKKPGL 217

Query: 209 RNSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTRVLIQHSFQRAKLQQFCAEFFAWP 268
            +SGDGQY+HK       I  Y              RVLIQHSFQRAKLQQFCAEFFAWP
Sbjct: 218 ASSGDGQYIHK----PLFIFLY--------------RVLIQHSFQRAKLQQFCAEFFAWP 277

Query: 269 PEKTDEYILPKIAEKDLRRFANLRSNTSNLGFNIPLQEVPVSCPVSGIVKHRKVQGNECY 328
           PEKTDEYILPKIAEKDLRRFANLRSNTS+LGFNIPLQEVPVSCPVSGIVKHRKVQGNECY
Sbjct: 278 PEKTDEYILPKIAEKDLRRFANLRSNTSDLGFNIPLQEVPVSCPVSGIVKHRKVQGNECY 337

Query: 329 EVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDE 388
           EVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDE
Sbjct: 338 EVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDE 397

Query: 389 RFQTLLLEIESESRAVRNLSQAPIVSENSNSATGLDELQDIILDVEPTIVDHAHGTENVE 448
           RF+TLLLEIESESRAVRNLSQAPIVSENSNSATGLD+LQ+IILDVEPTIVDHAHGTENVE
Sbjct: 398 RFRTLLLEIESESRAVRNLSQAPIVSENSNSATGLDDLQEIILDVEPTIVDHAHGTENVE 457

Query: 449 VIDLLSPSPAIQT---CKFRQGNCEKIDVIDLSDTENDQSPEHERKARELRLFLASLKGK 498
           VI+LLSPSPAIQT    KFRQGNCEKIDVIDLSDTENDQSPEHERKARELRLFLASLKGK
Sbjct: 458 VINLLSPSPAIQTRKVSKFRQGNCEKIDVIDLSDTENDQSPEHERKARELRLFLASLKGK 499

[Close]

BLAST of Cp4.1LG09g00980 vs. ExPASy TrEMBL
Match: A0A6J1FZ58 (flap endonuclease GEN-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111449235 PE=4 SV=1)

HSP 1 Score: 911 bits (2355), Expect = 0.0
Identity = 482/563 (85.61%), Postives = 490/563 (87.03%), Query Frame = 0


Query: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSY--------------------------- 60
           MGVKNLWDILESCKKTLPLHRLQNKRLCIDLS                            
Sbjct: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSCWMVQLQNVSKSHSCLNQKIYLKGLFHR 60

Query: 61  ----------------GSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL 120
                           GSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL
Sbjct: 61  LRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL 120

Query: 121 MIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDIGL 180
           MIKEAKALGL LGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDI L
Sbjct: 121 MIKEAKALGLALGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDICL 180

Query: 181 GDGGHV-------------------IALALLLGSDYSQGVYGMGRESACQIVKAVGDSTV 240
           GDGGHV                   IALALLLGSDY+QGVYGMGRESA QIVK VGDSTV
Sbjct: 181 GDGGHVVCYEMDDIEGQLGFGRNSMIALALLLGSDYTQGVYGMGRESARQIVKTVGDSTV 240

Query: 241 LQKIASEGLSFTKKGKNSKKPGLRNSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTR 300
           LQKIASEGLS+T KGKNSKKPGL NSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTR
Sbjct: 241 LQKIASEGLSYTMKGKNSKKPGLPNSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTR 300

Query: 301 VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTSNLGFNIPLQ 360
           VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTS+LGFNIPLQ
Sbjct: 301 VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTSDLGFNIPLQ 360

Query: 361 EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ 420
           EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ
Sbjct: 361 EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ 420

Query: 421 GRKPNKCRTKTKKSEATVAEIDERFQTLLLEIESESRAVRNLSQAPIVSENSNSATGLDE 480
           GRKPNKCRTKTKKSEATVAEIDERF+TLLLEIESESRAVRNLSQAPIVSENSNSATGLD+
Sbjct: 421 GRKPNKCRTKTKKSEATVAEIDERFRTLLLEIESESRAVRNLSQAPIVSENSNSATGLDD 480

Query: 481 LQDIILDVEPTIVDHAHGTENVEVIDLLSPSPAIQT---CKFRQGNCEKIDVIDLSDTEN 498
           LQ+IILDVEPTIVDHAHGTENVEVI+LLSPSPAIQT    KF+QGNCEKIDVIDLSDTEN
Sbjct: 481 LQEIILDVEPTIVDHAHGTENVEVINLLSPSPAIQTRKVSKFQQGNCEKIDVIDLSDTEN 540

[Close]

BLAST of Cp4.1LG09g00980 vs. ExPASy TrEMBL
Match: A0A6J1HZ11 (flap endonuclease GEN-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111467522 PE=4 SV=1)

HSP 1 Score: 902 bits (2332), Expect = 0.0
Identity = 477/563 (84.72%), Postives = 486/563 (86.32%), Query Frame = 0


Query: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSY--------------------------- 60
           MGVKNLWDILESCKKTLPLHRLQNKRLCIDLS                            
Sbjct: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSCWMVQLQNVSKSHSCLNQKIYLKGLFHR 60

Query: 61  ----------------GSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL 120
                           GSIPGIKLSTY+RRLNNGSEVVKNDTNSQQISSLKRN+GSEFSL
Sbjct: 61  LRALIALNCSLIFVTDGSIPGIKLSTYKRRLNNGSEVVKNDTNSQQISSLKRNQGSEFSL 120

Query: 121 MIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDIGL 180
           MIKEAKALGL LGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDI L
Sbjct: 121 MIKEAKALGLALGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDICL 180

Query: 181 GDGGHV-------------------IALALLLGSDYSQGVYGMGRESACQIVKAVGDSTV 240
           GDGGHV                   I+LALLLGSDYSQGVYGMGRESACQIVK VGDSTV
Sbjct: 181 GDGGHVVCYEMDDIERQLGFGRNSMISLALLLGSDYSQGVYGMGRESACQIVKTVGDSTV 240

Query: 241 LQKIASEGLSFTKKGKNSKKPGLRNSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTR 300
           LQKIASEGLSFTKKGKNSKK GL NSGDGQ+MHKCEEFSQVIDAYLRPKCHSADSDAVTR
Sbjct: 241 LQKIASEGLSFTKKGKNSKKSGLPNSGDGQFMHKCEEFSQVIDAYLRPKCHSADSDAVTR 300

Query: 301 VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTSNLGFNIPLQ 360
           VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNT+ LGFNIPLQ
Sbjct: 301 VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTAGLGFNIPLQ 360

Query: 361 EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ 420
           EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ
Sbjct: 361 EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ 420

Query: 421 GRKPNKCRTKTKKSEATVAEIDERFQTLLLEIESESRAVRNLSQAPIVSENSNSATGLDE 480
           GRKPNKC+TKTKKSEATVAEID+RFQTLLLEIESESRAVRNLSQAPIVSENSNSATGLDE
Sbjct: 421 GRKPNKCKTKTKKSEATVAEIDKRFQTLLLEIESESRAVRNLSQAPIVSENSNSATGLDE 480

Query: 481 LQDIILDVEPTIVDHAHGTENVEVIDLLSPSPAIQTCK---FRQGNCEKIDVIDLSDTEN 498
           LQDII DVEPTIVDHAHGTE VEVI+LLSPSPAIQT K   F+QGNCEKIDVIDLSDTEN
Sbjct: 481 LQDIIFDVEPTIVDHAHGTEIVEVINLLSPSPAIQTRKVPKFQQGNCEKIDVIDLSDTEN 540

[Close]

BLAST of Cp4.1LG09g00980 vs. ExPASy TrEMBL
Match: A0A6J1CIZ7 (flap endonuclease GEN-like 2 OS=Momordica charantia OX=3673 GN=LOC111011427 PE=4 SV=1)

HSP 1 Score: 784 bits (2024), Expect = 1.20e-281
Identity = 416/566 (73.50%), Postives = 450/566 (79.51%), Query Frame = 0


Query: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSY--------------------------- 60
           MGVKNLWDILESCKKTLPLHRLQNKRLCIDLS                            
Sbjct: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSCWMVQLQNVSKSHSCLHKKIYLQGLFHR 60

Query: 61  ----------------GSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL 120
                           GSIPGIKLSTYRRRLNNGSEV +ND NSQQI SLKRNKGSEFSL
Sbjct: 61  LRALIALNCSIIFVTDGSIPGIKLSTYRRRLNNGSEVAQNDANSQQIPSLKRNKGSEFSL 120

Query: 121 MIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDIGL 180
           MIKEAKALGL LGIPCLDG+EE EAQCALLNSE LCDGCFTSDSDVFLFGARTVYRDI L
Sbjct: 121 MIKEAKALGLALGIPCLDGIEEAEAQCALLNSESLCDGCFTSDSDVFLFGARTVYRDICL 180

Query: 181 GDGGHVIA-------------------LALLLGSDYSQGVYGMGRESACQIVKAVGDSTV 240
           GDGGHV+                    LALLLGSDYSQGVYG+GRESACQIVKAVGD  V
Sbjct: 181 GDGGHVVCYEMADIERQLGFGRNSMVTLALLLGSDYSQGVYGLGRESACQIVKAVGDGAV 240

Query: 241 LQKIASEGLSFTKKGKNSKKPGLRNSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTR 300
           LQKIASEGLSFTKKGKNSKK GL  SGDGQ +HKC+ F +VIDAYL+PKCHSADSDAVTR
Sbjct: 241 LQKIASEGLSFTKKGKNSKKQGLSKSGDGQCLHKCDHFLKVIDAYLKPKCHSADSDAVTR 300

Query: 301 VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTSNLGFNIPLQ 360
           VL+QH FQR KLQQ CAE F WPPEKTDEYILPKIAE+DLRRFANLRSNTS LGFNIPLQ
Sbjct: 301 VLVQHPFQRIKLQQICAELFTWPPEKTDEYILPKIAERDLRRFANLRSNTSALGFNIPLQ 360

Query: 361 EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ 420
           E+P +CPVSGIVKHRKVQG++C+EVSWK+L+GL SS+VPADLLQSACPEMIVEFEEQ+AQ
Sbjct: 361 EIPANCPVSGIVKHRKVQGSDCFEVSWKDLNGLDSSIVPADLLQSACPEMIVEFEEQKAQ 420

Query: 421 GRKPNKCRTKTKKSEATVAEIDERFQTLLLEIESESRAVRNLS--QAPIVSENSNSATGL 480
           G K N+ +TKTKKSEA VAEID+R QTLLL+IESESRAV +LS    PIVSE+S SATG+
Sbjct: 421 GMKQNRRKTKTKKSEAAVAEIDKRLQTLLLQIESESRAVHSLSLSHTPIVSESSTSATGV 480

Query: 481 DEL-QDIILDVEPTIVDHAHGTENVEVIDLLSPSPAIQTCK---FRQGNCEKIDVIDLSD 498
           DE+ Q+  LDVEPTI+D    TE +EVIDLLSPSPAIQT K   F+Q N EKIDVIDLSD
Sbjct: 481 DEMNQEDFLDVEPTIIDRTRSTERIEVIDLLSPSPAIQTSKVSKFQQENSEKIDVIDLSD 540

[Close]

BLAST of Cp4.1LG09g00980 vs. ExPASy TrEMBL
Match: A0A0A0L8N4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182000 PE=4 SV=1)

HSP 1 Score: 733 bits (1892), Expect = 1.28e-261
Identity = 396/566 (69.96%), Postives = 432/566 (76.33%), Query Frame = 0


Query: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSY--------------------------- 60
           MGVKNLWDILESCKKTLPLHRLQNKRLCIDLS                            
Sbjct: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSCWIVELSSVSKSHCHSNSKFYLKGLFYR 60

Query: 61  ----------------GSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL 120
                           GSIPGIKLSTYRRRLNNG+EV + D N QQI SLKRNKGSEFSL
Sbjct: 61  LRTLIALNCSLIFVTDGSIPGIKLSTYRRRLNNGNEVAQTDANPQQICSLKRNKGSEFSL 120

Query: 121 MIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDIGL 180
           MIKEA+ALGL LGIPCLD +EE EAQCALLNSELLCDGCFTSDSD FLFGARTVYRDI L
Sbjct: 121 MIKEAQALGLALGIPCLDAVEEAEAQCALLNSELLCDGCFTSDSDAFLFGARTVYRDICL 180

Query: 181 GDGGHV-------------------IALALLLGSDYSQGVYGMGRESACQIVKAVGDSTV 240
           GD GHV                   I  ALLLGSDYSQGVYGMGRESACQ+VKAVGD  V
Sbjct: 181 GDSGHVVCYEMDDIETRLGFGRNSMITFALLLGSDYSQGVYGMGRESACQLVKAVGDGAV 240

Query: 241 LQKIASEGLSFTKKGKNSKKPGLRNSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTR 300
           LQKI SEGL+  KKG+NSKK GL  SG G YM KC+EFS+VIDAYL+PKCHSADS+AVTR
Sbjct: 241 LQKITSEGLALAKKGENSKKQGLPKSGHGHYMLKCDEFSEVIDAYLKPKCHSADSEAVTR 300

Query: 301 VLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTSNLGFNIPLQ 360
           VL QH FQ  KLQQ CAEFF W PEKTDE ILPKIAE+DLRRFAN+RS TS LGFNIPLQ
Sbjct: 301 VLDQHPFQHVKLQQICAEFFEWSPEKTDENILPKIAERDLRRFANIRSRTSELGFNIPLQ 360

Query: 361 EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQ 420
           E+PVSCP+SGIVKHRKVQGNECYEVSWKN+ GL+ SVV ADLLQ ACPEMI+EFEE+RA 
Sbjct: 361 EIPVSCPISGIVKHRKVQGNECYEVSWKNI-GLNLSVVSADLLQRACPEMIIEFEEKRAD 420

Query: 421 GRKPNKCRTKTKKSEATVAEIDERFQTLLLEIESESRAVRNLSQAPIVSENSNSATGLDE 480
           G+K NK +TKTKKS A +AEID+R +TLLLEIESESR V N+S  PI  ++  S TG+ E
Sbjct: 421 GKKQNKGKTKTKKSAAVMAEIDKRLKTLLLEIESESRVVHNISHVPI--DSKTSGTGVHE 480

Query: 481 L-QDIILDVEPTIVDHAHG--TENVEVIDLLSPSPAIQT---CKFRQGNCEKIDVIDLSD 498
           L Q++ L++EP IVDHA    T+ +EVIDLLSPSPAIQT    KF+Q   +KIDVIDLSD
Sbjct: 481 LNQEVFLNIEPIIVDHARSCSTKRIEVIDLLSPSPAIQTRNVSKFQQKTSQKIDVIDLSD 540

[Close]

BLAST of Cp4.1LG09g00980 vs. ExPASy TrEMBL
Match: A0A1S3AYA2 (flap endonuclease GEN-like 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484071 PE=4 SV=1)

HSP 1 Score: 731 bits (1886), Expect = 1.13e-260
Identity = 397/568 (69.89%), Postives = 436/568 (76.76%), Query Frame = 0


Query: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSY--------------------------- 60
           MGVKNLWDILESCKKTLPLHRLQNKRLCIDLS                            
Sbjct: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSCWIVQLSSVSKSHCHSNSKFYLQGLFYR 60

Query: 61  ----------------GSIPGIKLSTYRRRLNNGSE--VVKNDTNSQQISSLKRNKGSEF 120
                           GSIPGIK+STYRRRLNNG+E  V + D N QQI SLKRN GSEF
Sbjct: 61  LRTLIALNCSLIFVTDGSIPGIKVSTYRRRLNNGNEKQVAQTDANPQQICSLKRNMGSEF 120

Query: 121 SLMIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDI 180
           SLMIKEA+ALGL LGIPCLD +EE EAQCALLNSELLCDGCFTSDSD FLFGARTVYRDI
Sbjct: 121 SLMIKEAQALGLALGIPCLDAVEEAEAQCALLNSELLCDGCFTSDSDAFLFGARTVYRDI 180

Query: 181 GLGDGGHV-------------------IALALLLGSDYSQGVYGMGRESACQIVKAVGDS 240
            LGD GHV                   I  ALLLGSDYSQGVYGMGRESACQ+VKAVGD 
Sbjct: 181 CLGDSGHVVCYELDDIKTRLGFGRNSMITFALLLGSDYSQGVYGMGRESACQLVKAVGDV 240

Query: 241 TVLQKIASEGLSFTKKGKNSKKPGLRNSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAV 300
            VLQKI SEGL+  KKGKNSKK  L  SG+GQY+ KC+EFS+VIDAYL+PKCHSADS+AV
Sbjct: 241 AVLQKITSEGLALAKKGKNSKKQELPKSGNGQYILKCDEFSEVIDAYLKPKCHSADSEAV 300

Query: 301 TRVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTSNLGFNIP 360
           +RVL+QH FQR KLQQ CAEFF WPP+KTDE ILP IAE+DLRRFAN+RS TS LGFNIP
Sbjct: 301 SRVLVQHPFQRVKLQQICAEFFGWPPDKTDEKILPWIAERDLRRFANIRSRTSELGFNIP 360

Query: 361 LQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQR 420
           LQE+PVSCPVSGIVKHRKVQGNECYEVSWKN+DGL S VV ADLLQSACPEMIVEFEE+R
Sbjct: 361 LQEIPVSCPVSGIVKHRKVQGNECYEVSWKNIDGLIS-VVSADLLQSACPEMIVEFEEKR 420

Query: 421 AQGRKPNKCRTKTKKSEATVAEIDERFQTLLLEIESESRAVRNLSQAPIVSENSNSATGL 480
           A+G+K NK +TKTKKS A +AEID+R QTLLLEIESESRAV N+S  PI  ++  S TG+
Sbjct: 421 AEGKKQNKGKTKTKKSAAAMAEIDKRLQTLLLEIESESRAVHNISHLPI--DSKTSGTGV 480

Query: 481 DEL-QDIILDVEPTIVDHAHG--TENVEVIDLLSPSPAIQT---CKFRQGNCEKIDVIDL 498
            EL Q++ L++EP IVDHA    T+ +EVIDLLSPSPAI T    KF+Q   +KIDVIDL
Sbjct: 481 HELNQEVFLNIEPIIVDHARSCSTKRIEVIDLLSPSPAIHTHRVSKFQQKTSQKIDVIDL 540

[Close]

BLAST of Cp4.1LG09g00980 vs. TAIR 10
Match: AT3G48900.2 (single-stranded DNA endonuclease family protein )

HSP 1 Score: 450.3 bits (1157), Expect = 2.0e-126
Identity = 261/601 (43.43%), Postives = 357/601 (59.40%), Query Frame = 0


Query: 1   MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSY--------------------------- 60
           MGVK LWD+LE CKKT PL  LQNKR+C+DLS                            
Sbjct: 1   MGVKYLWDVLEPCKKTFPLDHLQNKRVCVDLSCWMVELHKVNKSYCATKEKVYLRGFFHR 60

Query: 61  ----------------GSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSL 120
                           G+IPGIK+ TY+RRL    E+  +     + +SLKRN GSEFS 
Sbjct: 61  LRALIALNCSIILVSDGAIPGIKVPTYKRRLKARFEIADDGVEPSKETSLKRNMGSEFSC 120

Query: 121 MIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDIGL 180
           +IKEAK +  TLGI CLDG+EE EAQCALLNSE LCD CF+ DSD+FLFGA+TVYR+I L
Sbjct: 121 IIKEAKVIASTLGILCLDGIEEAEAQCALLNSESLCDACFSFDSDIFLFGAKTVYREICL 180

Query: 181 GDGGHV-------------------IALALLLGSDYSQGVYGMGRESACQIVKAVGDSTV 240
           G+GG+V                   IALALLLGSDYSQGV G+ +E AC++V+++GD+ +
Sbjct: 181 GEGGYVVCYEMDDIKKKLGLGRNSLIALALLLGSDYSQGVRGLRQEKACELVRSIGDNVI 240

Query: 241 LQKIASEGLSFTKKGKNSKK-------------PGLRNSGDGQYMHKCEEFSQVIDAYLR 300
           L+K+ASEGLSF +K + SKK             P +  +G+ +   + EE  QVIDA++ 
Sbjct: 241 LEKVASEGLSFAEKPRKSKKQVRPSVCSKKGTLPLVVINGNNRDPERLEEIKQVIDAFMN 300

Query: 301 PKCHSADSDAVTRVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLR 360
           PKCH ADS+ V+R L + SFQR KLQ+ C +FF WPPEKTDEYILPK+AE++LRRFANL+
Sbjct: 301 PKCHQADSNTVSRALAEFSFQRTKLQEICHQFFEWPPEKTDEYILPKVAERNLRRFANLQ 360

Query: 361 SNTSNLGFNIPLQ--EVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQS 420
           S ++ +  N+PL   ++P  CPVS I+K RKVQG EC+EVSW +L+GL SS+VPADL++ 
Sbjct: 361 SRSTEVEVNLPLHKPQMPEKCPVSEIIKTRKVQGRECFEVSWNDLEGLESSIVPADLVER 420

Query: 421 ACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAE---IDERFQTLLLEIESESRAVRN- 480
           ACPE I+EF+E+ A  +K  K + K K++ +       ++   +   L++ S S   R+ 
Sbjct: 421 ACPEKIIEFKEKMAAKKKKPKPKQKQKETSSPTKSSSLVELSLELQHLDLNSTSLVSRST 480

Query: 481 LSQAPIVSENSNSATGLDELQDIILDVEPTIVDHAHGT-----------------ENVEV 497
           L +A   +E  NS     +  D +  ++    ++ +                      EV
Sbjct: 481 LEEAEQENEQQNS-----KKHDYLRLIDSPDRENCNNAWSNRDRLGVGMSSFPLYPETEV 540

[Close]

BLAST of Cp4.1LG09g00980 vs. TAIR 10
Match: AT3G48900.1 (single-stranded DNA endonuclease family protein )

HSP 1 Score: 397.1 bits (1019), Expect = 2.0e-110
Identity = 226/507 (44.58%), Postives = 317/507 (62.52%), Query Frame = 0


Query: 52  SEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLTLGIPCLDGLEEGEAQCALLNSEL 111
           S++  +     + +SLKRN GSEFS +IKEAK +  TLGI CLDG+EE EAQCALLNSE 
Sbjct: 31  SQIADDGVEPSKETSLKRNMGSEFSCIIKEAKVIASTLGILCLDGIEEAEAQCALLNSES 90

Query: 112 LCDGCFTSDSDVFLFGARTVYRDIGLGDGGHV-------------------IALALLLGS 171
           LCD CF+ DSD+FLFGA+TVYR+I LG+GG+V                   IALALLLGS
Sbjct: 91  LCDACFSFDSDIFLFGAKTVYREICLGEGGYVVCYEMDDIKKKLGLGRNSLIALALLLGS 150

Query: 172 DYSQGVYGMGRESACQIVKAVGDSTVLQKIASEGLSFTKKGKNSKK-------------P 231
           DYSQGV G+ +E AC++V+++GD+ +L+K+ASEGLSF +K + SKK             P
Sbjct: 151 DYSQGVRGLRQEKACELVRSIGDNVILEKVASEGLSFAEKPRKSKKQVRPSVCSKKGTLP 210

Query: 232 GLRNSGDGQYMHKCEEFSQVIDAYLRPKCHSADSDAVTRVLIQHSFQRAKLQQFCAEFFA 291
            +  +G+ +   + EE  QVIDA++ PKCH ADS+ V+R L + SFQR KLQ+ C +FF 
Sbjct: 211 LVVINGNNRDPERLEEIKQVIDAFMNPKCHQADSNTVSRALAEFSFQRTKLQEICHQFFE 270

Query: 292 WPPEKTDEYILPKIAEKDLRRFANLRSNTSNLGFNIPLQ--EVPVSCPVSGIVKHRKVQG 351
           WPPEKTDEYILPK+AE++LRRFANL+S ++ +  N+PL   ++P  CPVS I+K RKVQG
Sbjct: 271 WPPEKTDEYILPKVAERNLRRFANLQSRSTEVEVNLPLHKPQMPEKCPVSEIIKTRKVQG 330

Query: 352 NECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVA 411
            EC+EVSW +L+GL SS+VPADL++ ACPE I+EF+E+ A  +K  K + K K++ +   
Sbjct: 331 RECFEVSWNDLEGLESSIVPADLVERACPEKIIEFKEKMAAKKKKPKPKQKQKETSSPTK 390

Query: 412 E---IDERFQTLLLEIESESRAVRN-LSQAPIVSENSNSATGLDELQDIILDVEPTIVDH 471
               ++   +   L++ S S   R+ L +A   +E  NS     +  D +  ++    ++
Sbjct: 391 SSSLVELSLELQHLDLNSTSLVSRSTLEEAEQENEQQNS-----KKHDYLRLIDSPDREN 450

Query: 472 AHGT-----------------ENVEVIDLLSPSPAIQTCKFRQGNCEKID-------VID 497
            +                      EVIDL+SP P  ++    +   E+         VI+
Sbjct: 451 CNNAWSNRDRLGVGMSSFPLYPETEVIDLISPCPEARSRSVSRSYQEQKSHDHQLETVIE 510

[Close]

BLAST of Cp4.1LG09g00980 vs. TAIR 10
Match: AT3G28030.1 (5'-3' exonuclease family protein )

HSP 1 Score: 97.4 bits (241), Expect = 3.4e-20
Identity = 92/294 (31.29%), Postives = 121/294 (41.16%), Query Frame = 0


Query: 67   LKRNKGSEFSLMIKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLF 126
            L+RN  S  S M  E + L    GIP +    E EAQCA +    L DG  T DSDVFLF
Sbjct: 914  LERNAESVSSEMFAECQELLQIFGIPYIIAPMEAEAQCAFMEQSNLVDGIVTDDSDVFLF 973

Query: 127  GARTVYRDI-------------------GLGDGGHVIALALLLGSDYSQGVYGMGRESAC 186
            GAR+VY++I                   GL     +I +A+LLGSDY++G+ G+G  +A 
Sbjct: 974  GARSVYKNIFDDRKYVETYFMKDIEKELGL-SRDKIIRMAMLLGSDYTEGISGIGIVNAI 1033

Query: 187  QIVKAVGDSTVLQKIAS---------EGLSFTKKGKNSKKPG---LRNSG--DGQYMHKC 246
            ++V A  +   LQK             G +  K G   KK G   + N G   G      
Sbjct: 1034 EVVTAFPEEDGLQKFREWVESPDPTILGKTDAKTGSKVKKRGSASVDNKGIISGASTDDT 1093

Query: 247  EEFSQ-----------------------VIDAYLRPKCHSADSDAVTRVLIQHSFQRAKL 291
            EE  Q                       VI AYL P+      D  T          + L
Sbjct: 1094 EEIKQIFMDQHRKVSKNWHIPLTFPSEAVISAYLNPQV-----DLSTEKFSWGKPDLSVL 1153

[Close]

BLAST of Cp4.1LG09g00980 vs. TAIR 10
Match: AT1G01880.2 (5'-3' exonuclease family protein )

HSP 1 Score: 86.3 bits (212), Expect = 7.7e-17
Identity = 87/268 (32.46%), Postives = 121/268 (45.15%), Query Frame = 0


Query: 1   MGV-KNLWDILESCKKTLPLHRLQNKRLCIDLSYGSI------------PGIKLSTYRRR 60
           MGV  N WD+L    +      L+NKR+ +DLS+  +            P ++L T+ R 
Sbjct: 1   MGVGGNFWDLLRPYAQQQGFDFLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRL-TFFRT 60

Query: 61  LNNGSE------VVKNDTNS-----QQISSLKRNKGSE------------------FSLM 120
           +N  S+       V + T S      +IS   R+ G +                  FS  
Sbjct: 61  INLFSKFGAYPVFVVDGTPSPLKSQARISRFFRSSGIDTCNLPVIKDGVSVERNKLFSEW 120

Query: 121 IKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDI--- 180
           ++E + L L LGIP L    E EA CA LNS+   D C T DSD FLFGA  V +DI   
Sbjct: 121 VRECELLEL-LGIPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLFGAMCVIKDIKPN 180

Query: 181 ---------------GLG-DGGHVIALALLLGSDY-SQGVYGMGRESACQIVKAVGDSTV 207
                          GLG    H+IA++LL+G+DY S GV G+G + A +IV+   +  V
Sbjct: 181 SREPFECYHMSHIESGLGLKRKHLIAISLLVGNDYDSGGVLGIGVDKALRIVREFSEDQV 240

[Close]

BLAST of Cp4.1LG09g00980 vs. TAIR 10
Match: AT1G01880.1 (5'-3' exonuclease family protein )

HSP 1 Score: 85.9 bits (211), Expect = 1.0e-16
Identity = 86/268 (32.09%), Postives = 119/268 (44.40%), Query Frame = 0


Query: 1   MGV-KNLWDILESCKKTLPLHRLQNKRLCIDLSYGSI------------PGIKLSTYRRR 60
           MGV  N WD+L    +      L+NKR+ +DLS+  +            P ++L T+ R 
Sbjct: 1   MGVGGNFWDLLRPYAQQQGFDFLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRL-TFFRT 60

Query: 61  LNNGSE------VVKNDTNS-----QQISSLKRNKGSE------------------FSLM 120
           +N  S+       V + T S      +IS   R+ G +                  FS  
Sbjct: 61  INLFSKFGAYPVFVVDGTPSPLKSQARISRFFRSSGIDTCNLPVIKDGVSVERNKLFSEW 120

Query: 121 IKEAKALGLTLGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDI--- 180
           ++E   L   LGIP L    E EA CA LNS+   D C T DSD FLFGA  V +DI   
Sbjct: 121 VRECVELLELLGIPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLFGAMCVIKDIKPN 180

Query: 181 ---------------GLG-DGGHVIALALLLGSDY-SQGVYGMGRESACQIVKAVGDSTV 207
                          GLG    H+IA++LL+G+DY S GV G+G + A +IV+   +  V
Sbjct: 181 SREPFECYHMSHIESGLGLKRKHLIAISLLVGNDYDSGGVLGIGVDKALRIVREFSEDQV 240

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g00980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2Z3	2.9e-125	43.43	Single-strand DNA endonuclease 1 OS=Arabidopsis thaliana OX=3702 GN=SEND1 PE=1 S...	[more]
Q8W5R1	1.3e-122	51.39	Single-strand DNA endonuclease 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SEN...	[more]
Q9ATY5	4.7e-19	31.29	DNA repair protein UVH3 OS=Arabidopsis thaliana OX=3702 GN=UVH3 PE=2 SV=1	[more]
P07276	1.3e-16	30.42	DNA repair protein RAD2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)...	[more]
Q17RS7	1.7e-16	29.54	Flap endonuclease GEN homolog 1 OS=Homo sapiens OX=9606 GN=GEN1 PE=1 SV=2	[more]

BLAST of Cp4.1LG09g00980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541410.1	0.0	88.75	flap endonuclease GEN-like 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022944807.1	0.0	85.61	flap endonuclease GEN-like 2 [Cucurbita moschata]	[more]
KAG6574173.1	0.0	85.44	Flap endonuclease GEN-like 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022968219.1	0.0	84.72	flap endonuclease GEN-like 2 [Cucurbita maxima]	[more]
KAG7013227.1	9.33e-286	88.13	Flap endonuclease GEN-like 2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG09g00980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FZ58	0.0	85.61	flap endonuclease GEN-like 2 OS=Cucurbita moschata OX=3662 GN=LOC111449235 PE=4 ...	[more]
A0A6J1HZ11	0.0	84.72	flap endonuclease GEN-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111467522 PE=4 SV...	[more]
A0A6J1CIZ7	1.20e-281	73.50	flap endonuclease GEN-like 2 OS=Momordica charantia OX=3673 GN=LOC111011427 PE=4...	[more]
A0A0A0L8N4	1.28e-261	69.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182000 PE=4 SV=1	[more]
A0A1S3AYA2	1.13e-260	69.89	flap endonuclease GEN-like 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484071 ...	[more]

BLAST of Cp4.1LG09g00980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48900.2	2.0e-126	43.43	single-stranded DNA endonuclease family protein	[more]
AT3G48900.1	2.0e-110	44.58	single-stranded DNA endonuclease family protein	[more]
AT3G28030.1	3.4e-20	31.29	5'-3' exonuclease family protein	[more]
AT1G01880.2	7.7e-17	32.46	5'-3' exonuclease family protein	[more]
AT1G01880.1	1.0e-16	32.09	5'-3' exonuclease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006086	XPG-I domain	SMART	SM00484	xpgineu	coord: 87..152 e-value: 1.4E-4 score: 31.2
IPR006086	XPG-I domain	PFAM	PF00867	XPG_I	coord: 89..135 e-value: 4.0E-12 score: 46.3
None	No IPR available	GENE3D	2.40.50.40		coord: 304..371 e-value: 3.0E-7 score: 32.0
None	No IPR available	GENE3D	3.40.50.1010		coord: 38..141 e-value: 7.8E-16 score: 60.4
None	No IPR available	GENE3D	1.10.150.20		coord: 142..197 e-value: 9.6E-7 score: 30.7
None	No IPR available	GENE3D	3.40.50.1010		coord: 1..37 e-value: 2.0E-5 score: 26.4
None	No IPR available	PANTHER	PTHR11081:SF54	FLAP ENDONUCLEASE GEN HOMOLOG 1	coord: 1..32 coord: 34..407
None	No IPR available	CDD	cd09900	H3TH_XPG-like	coord: 141..184 e-value: 6.33155E-9 score: 49.7912
None	No IPR available	CDD	cd00024	CD_CSD	coord: 306..354 e-value: 1.58787E-5 score: 40.1529
IPR006084	XPG/Rad2 endonuclease	PANTHER	PTHR11081	FLAP ENDONUCLEASE FAMILY MEMBER	coord: 1..32
IPR006084	XPG/Rad2 endonuclease	PANTHER	PTHR11081	FLAP ENDONUCLEASE FAMILY MEMBER	coord: 34..407
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 304..364 score: 8.937501
IPR036279	5'-3' exonuclease, C-terminal domain superfamily	SUPERFAMILY	47807	5' to 3' exonuclease, C-terminal subdomain	coord: 142..285
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 306..362
IPR029060	PIN-like domain superfamily	SUPERFAMILY	88723	PIN domain-like	coord: 2..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g00980.1	Cp4.1LG09g00980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
molecular_function	GO:0017108	5'-flap endonuclease activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004518	nuclease activity