Cp4.1LG09g00570 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG09g00570
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG09: 300997 .. 303851 (-)
RNA-Seq ExpressionCp4.1LG09g00570
SyntenyCp4.1LG09g00570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGAACTAGTGCTTGATGAGGAAGAGAAGCGTCCATCAATGGCGGCAACCATCCGGTACATGTAAGCTCCTAACAGTGTGCCATAAAGAAATAGGCTCCTAACCATTGAAATACCCTTCTCTTCTCTATTCTCCTTCTTCTTTTCGACCATCTCCCTGTCTCAAATGATTATCCAACCCTCTGAAATTCCAACGCCATCATTGCCACAACCCAGAACGTACGGAGCCTTTTCCAACTGTTTCCCTTCTGGGTTCCATACTTTCCTTGGCTTCCAATTCAATTCTCCCGTGTTTCCCCCTTTCCCCTGCGAATTGGGTCGTTCAGAATATTGTAATCAGAGCTCTGTTTCGATTGGTCTCGTGGGGATTTTGAAAGGTATGTGAGGTTCCTTGTTTTAGCTTTATGCGTATTGGGTTTAATGTAATTTAGGTATTCGAAATGAAACCAAACTGTATGAACTTGTTTGTTTCTGTGGGTTGAGATTTTGAATTTGTGTTGTTTGGTGATTATGGAAAGTCAACTTGTAGACCTAATTTTGCAGGTATGGACCAGAATTGCACGTAATTTAGCTTGAACGGATAGTTTTCGTCTGAGAAAATGATGAAGAATAGCTTCATCTTCCTTGAAATTATGTTGTTTATAGCGATAATCTTACCAGGGGCTCTCACTGAGCCAGTTGAAGACAAGCAAGCATTGCTTGATTTCTTCCATAACATCCCACACTCGCCTTCTCTCAATTGGAATGAGAGTAGTTCTGTGTGCAAAGGCTGGGCAGGAGTGTTTTGCAACTCTGATGAGTCTAGAGTAGTAGCCATTCGATTACCGGCGACCGGTCTGCTCGGTCCGATTCCTGTGAATACTCTTAGCCGCCTATCTGCACTTGAGACTCTAAGCCTTAGATTAAATAGGATATCAGGGCCTTTCCCTTCTGATCTTTCCCAGCTGGAAAACTTGAGTTCCTTATATTTGCAATACAACGAGTTTTCTGGTCCTTTGCCTTTGGACTTTTCAGTTTGGAGGAACCTTAGTGTCATTGATCTATCTAACAATCTCTTTAATGGGAGTATTCCTTCTTCAATCTCAAACTTGACTCATCTGACTGTTCTGAATCTTGCAAACAACTCGTTGTCGGGCGAATTTCCTGACCTTGATATTCCGAGTTTGCAATGGTTAGATTTGTCTAACAATAGTCTTACAGGAAATGTGCCTCATTCTCTTACAAGATTTCCAAGTTGGGTGTTCTCCAATAACAATATTACCGTAGAACACGGTGCAATTCCCCCGTCTTTTCCGCTCCAGCCTCCCGGTTCTCGACCGACACGAAAAGGAAAAGGACTAAGTGAATCTGCTATATTGGGTGTTGCAATTGGTGGTTCTGTTGTTGGATTAATTTTGGTAGCAGTTTTGTTGACTGCTTGCTGGTTGAAAAGGGGAAAAGAAAATGGTAGTTCCACTATGGAGTCCAAAAAGAAGGAAACATCTGTGAACAAAGGGGGATTTGAGAGCCAAGAACAAAAGAACAACCTTAATTTCTTCATGGATTCTAATCTTGCATTTGATTTGGAAGACCTGTTGAGAGCGTCTGCTGAGGTTCTCGGGAAGGGAACCTTCGGAGTGAGCTACAAGGCAACGTTGGAGGACTCGACGACTGTGGTAGTGAAGAGGCTGAATCAAGTGACGGTTGGAAAACGAGAATTTGAACAGCAGATGGAGTTGATTGGAAACATTAAGCACGAGCACGTTGTTTCGCTAAGAGCATACTATTACTCGAAGGACGAGAAGCTTATGGTCTATGATTACTATGGACAAGGGAGTGTTTCTGCAATGTTACACAGTAAGTATTCCGTCTCCTTGCTCCTTCTGCAATAATTTCTATACAACTCTCTTGTGAATCTGTGTTCTAAACAAATCGGCGAATCAATCTAATGATGCAGGTAAAGAAGGAAATGGTTTACCGTTATTAGATTGGGATAGTCGGATGAAAATTGCGATCGGAACGGCTCGAGGTCTTGCTCATATTCACACAGAAAACGGAGGAAAATGTTCACATGGAAACGTGCGAGCCTCAAACATTTTCCTAAACTCTAAAGGGTATGGCTGTGTATCTGATGTTGGTTTGTCTGTGTTGATGAATTCTATTCCGGTACCAGCCACGAGAACGGTTGGATACCGAGCCCCTGAAGTGAGCGACACTCGGAGAGCATCGGAAGCAGCGGATGTGTACAGTTTCGGGGTAGTACTGCTGGAACTCCTGACTGGAAAGTGTCCCATACATGTTGAAGGTGGTAATGAAGTGGTTAACTTGGTGAGGTGGGTGAAGTCTGTGGTGAGGGAGGAATGGACAGCAGAAGTGTTTGATGTGGAGCTTCTGAGGTATCCAAATATAGAAGAAGAAATGGTGGAGATGCTGCAAATTGGGTTGTCTTGTGTTGCCAGAATGCCCGAGGAGAGGCCGAAGATGATGGATATCGTGTCGAGAATCGAGCAAGTTTGGCGAATGAGCACCGGGACGGGACCATCATCTGGATCAAGATCGGCGCATTCTACTCCAGTTCGTGTAATGGAAATCGGTTCGTCCTCATATTCACATTGAAATTTCTAATCATCTTTGTTGTGTTATGGTGGTTACACAGTACATAGGTTTCTTCTATCCCCTTCTCATATCCATTCATTTAAACTGCTTGAATTGGAGATTGTTTTACCATTTTGGGTCTTTTTAATAAATGTTTCTTTTCATTGCATATGAAATTTTATATGCTATTTTACATTTGTGCCTAATAAATAAATATTTTAACTTTCAAAAATATATAATATATTCCTCTTTTAGTATATTTTTTAACTTTAAAATATTTAA

mRNA sequence

CAAGAACTAGTGCTTGATGAGGAAGAGAAGCGTCCATCAATGGCGGCAACCATCCGGTACATGTAAGCTCCTAACAGTGTGCCATAAAGAAATAGGCTCCTAACCATTGAAATACCCTTCTCTTCTCTATTCTCCTTCTTCTTTTCGACCATCTCCCTGTCTCAAATGATTATCCAACCCTCTGAAATTCCAACGCCATCATTGCCACAACCCAGAACGTACGGAGCCTTTTCCAACTGTTTCCCTTCTGGGTTCCATACTTTCCTTGGCTTCCAATTCAATTCTCCCGTGTTTCCCCCTTTCCCCTGCGAATTGGGTCGTTCAGAATATTGTAATCAGAGCTCTGTTTCGATTGGTCTCGTGGGGATTTTGAAAGGTATGGACCAGAATTGCACGTAATTTAGCTTGAACGGATAGTTTTCGTCTGAGAAAATGATGAAGAATAGCTTCATCTTCCTTGAAATTATGTTGTTTATAGCGATAATCTTACCAGGGGCTCTCACTGAGCCAGTTGAAGACAAGCAAGCATTGCTTGATTTCTTCCATAACATCCCACACTCGCCTTCTCTCAATTGGAATGAGAGTAGTTCTGTGTGCAAAGGCTGGGCAGGAGTGTTTTGCAACTCTGATGAGTCTAGAGTAGTAGCCATTCGATTACCGGCGACCGGTCTGCTCGGTCCGATTCCTGTGAATACTCTTAGCCGCCTATCTGCACTTGAGACTCTAAGCCTTAGATTAAATAGGATATCAGGGCCTTTCCCTTCTGATCTTTCCCAGCTGGAAAACTTGAGTTCCTTATATTTGCAATACAACGAGTTTTCTGGTCCTTTGCCTTTGGACTTTTCAGTTTGGAGGAACCTTAGTGTCATTGATCTATCTAACAATCTCTTTAATGGGAGTATTCCTTCTTCAATCTCAAACTTGACTCATCTGACTGTTCTGAATCTTGCAAACAACTCGTTGTCGGGCGAATTTCCTGACCTTGATATTCCGAGTTTGCAATGGTTAGATTTGTCTAACAATAGTCTTACAGGAAATGTGCCTCATTCTCTTACAAGATTTCCAAGTTGGGTGTTCTCCAATAACAATATTACCGTAGAACACGGTGCAATTCCCCCGTCTTTTCCGCTCCAGCCTCCCGGTTCTCGACCGACACGAAAAGGAAAAGGACTAAGTGAATCTGCTATATTGGGTGTTGCAATTGGTGGTTCTGTTGTTGGATTAATTTTGGTAGCAGTTTTGTTGACTGCTTGCTGGTTGAAAAGGGGAAAAGAAAATGGTAGTTCCACTATGGAGTCCAAAAAGAAGGAAACATCTGTGAACAAAGGGGGATTTGAGAGCCAAGAACAAAAGAACAACCTTAATTTCTTCATGGATTCTAATCTTGCATTTGATTTGGAAGACCTGTTGAGAGCGTCTGCTGAGGTTCTCGGGAAGGGAACCTTCGGAGTGAGCTACAAGGCAACGTTGGAGGACTCGACGACTGTGGTAGTGAAGAGGCTGAATCAAGTGACGGTTGGAAAACGAGAATTTGAACAGCAGATGGAGTTGATTGGAAACATTAAGCACGAGCACGTTGTTTCGCTAAGAGCATACTATTACTCGAAGGACGAGAAGCTTATGGTCTATGATTACTATGGACAAGGGAGTGTTTCTGCAATGTTACACAGTAAAGAAGGAAATGGTTTACCGTTATTAGATTGGGATAGTCGGATGAAAATTGCGATCGGAACGGCTCGAGGTCTTGCTCATATTCACACAGAAAACGGAGGAAAATGTTCACATGGAAACGTGCGAGCCTCAAACATTTTCCTAAACTCTAAAGGGTATGGCTGTGTATCTGATGTTGGTTTGTCTGTGTTGATGAATTCTATTCCGGTACCAGCCACGAGAACGGTTGGATACCGAGCCCCTGAAGTGAGCGACACTCGGAGAGCATCGGAAGCAGCGGATGTGTACAGTTTCGGGGTAGTACTGCTGGAACTCCTGACTGGAAAGTGTCCCATACATGTTGAAGGTGGTAATGAAGTGGTTAACTTGGTGAGGTGGGTGAAGTCTGTGGTGAGGGAGGAATGGACAGCAGAAGTGTTTGATGTGGAGCTTCTGAGGTATCCAAATATAGAAGAAGAAATGGTGGAGATGCTGCAAATTGGGTTGTCTTGTGTTGCCAGAATGCCCGAGGAGAGGCCGAAGATGATGGATATCGTGTCGAGAATCGAGCAAGTTTGGCGAATGAGCACCGGGACGGGACCATCATCTGGATCAAGATCGGCGCATTCTACTCCAGTTCGTGTAATGGAAATCGGTTCGTCCTCATATTCACATTGAAATTTCTAATCATCTTTGTTGTGTTATGGTGGTTACACAGTACATAGGTTTCTTCTATCCCCTTCTCATATCCATTCATTTAAACTGCTTGAATTGGAGATTGTTTTACCATTTTGGGTCTTTTTAATAAATGTTTCTTTTCATTGCATATGAAATTTTATATGCTATTTTACATTTGTGCCTAATAAATAAATATTTTAACTTTCAAAAATATATAATATATTCCTCTTTTAGTATATTTTTTAACTTTAAAATATTTAA

Coding sequence (CDS)

ATGATTATCCAACCCTCTGAAATTCCAACGCCATCATTGCCACAACCCAGAACGTACGGAGCCTTTTCCAACTGTTTCCCTTCTGGGTTCCATACTTTCCTTGGCTTCCAATTCAATTCTCCCGTGTTTCCCCCTTTCCCCTGCGAATTGGGTCGTTCAGAATATTGTAATCAGAGCTCTGTTTCGATTGGTCTCGTGGGGATTTTGAAAGGTATGGACCAGAATTGCACGTAA

Protein sequence

MIIQPSEIPTPSLPQPRTYGAFSNCFPSGFHTFLGFQFNSPVFPPFPCELGRSEYCNQSSVSIGLVGILKGMDQNCT
Homology
[Close]
BLAST of Cp4.1LG09g00570 vs. NCBI nr
Match: KAG6574219.1 (hypothetical protein SDJN03_28106, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 161 bits (408), Expect = 4.97e-50
Identity = 75/77 (97.40%), Postives = 75/77 (97.40%), Query Frame = 0 

Query: 1  MIIQPSEIPTPSLPQPRTYGAFSNCFPSGFHTFLGFQFNSPVFPPFPCELGRSEYCNQSS 60
          MIIQPSEIPTPSLPQPRTYGAFSNCFPSG HTFL FQFNSPVFPPFPCELGRSEYCNQSS
Sbjct: 1  MIIQPSEIPTPSLPQPRTYGAFSNCFPSGLHTFLSFQFNSPVFPPFPCELGRSEYCNQSS 60

Query: 61 VSIGLVGILKGMDQNCT 77
          VSIGLVGILKGMDQNCT
Sbjct: 61 VSIGLVGILKGMDQNCT 77

[Close]
BLAST of Cp4.1LG09g00570 vs. NCBI nr
Match: KAG7013288.1 (putative inactive receptor kinase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 146 bits (369), Expect = 6.54e-39
Identity = 68/72 (94.44%), Postives = 70/72 (97.22%), Query Frame = 0 

Query: 1  MIIQPSEIPTPSLPQPRTYGAFSNCFPSGFHTFLGFQFNSPVFPPFPCELGRSEYCNQSS 60
          MII+PSEIPTPSLPQPRTYGAFSNCFPSGFHTFL FQFNSPVFPPFPCELGRSEYCNQSS
Sbjct: 1  MIIRPSEIPTPSLPQPRTYGAFSNCFPSGFHTFLSFQFNSPVFPPFPCELGRSEYCNQSS 60

Query: 61 VSIGLVGILKGM 72
          VSIGLVGILK +
Sbjct: 61 VSIGLVGILKAI 72

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g00570 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG09g00570 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6574219.14.97e-5097.40hypothetical protein SDJN03_28106, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7013288.16.54e-3994.44putative inactive receptor kinase [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Cp4.1LG09g00570 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG09g00570 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g00570.1Cp4.1LG09g00570.1mRNA