Cp4.1LG09g00300 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG09g00300
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RWP-RK domain-containing protein
Location	Cp4.1LG09: 114286 .. 115272 (-)
RNA-Seq Expression	Cp4.1LG09g00300
Synteny	Cp4.1LG09g00300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCCCAGCACCAAACTACACCCACACGACTTTGACTTTGAGTGGCCATATCACCAACATATTTTCCCCTTCGACCACGAGTAAGAACAAACCATCTAAATTGATAGATACAGTTCAATTTGTTAACACAAGTCTAAAGGATTCAACTTTACGTGATGGGTTCATTTTAAATTGATTTGTCTTTGATGGGTCTTGCTTAATTTTGGTTTTTTCATTTTCCACAGAGCACTAGAGCTTCCTCCATTAGATGTCGATGGATCCTTCGACTTCAACTCGCTGTCCTTACCATTCCATTGGGATGATATTTCCGAGTTGGAGGCTGAAATTTTGTCGTTGGACAAACACATGATACCAGTTACACCACTTTATGAGGAGCACATGGTGGCCGATGAGACGAAGCCGGAGAGAATGGTGAAATTAAAAGACGACGATATGAGTAGGGAGTTGCAGGAGGTGACAAGGATGATTGAAACAGGGCTTTCAAGTTGTAAAGAAGAAGAAGAAGAAGAGTATGAAAGGAGGGTGAGATTAATAATGAGAAACGGGAGGAGAACGAATTCAGTGTTGGGATTGGAAGAGATTCAAAAGCACTTTCATATCCCAATAACAGAGGCCGCAAAAGCGATGAATGTGGGTTTGACAGTGCTTAAAAGGAGGTGCAGAGAACTTCATATAATGAGATGGCCTCATAGAAAGCTCAAGAGCTTGAACTCTCTCATTACAAATGTCCAGGTTTGTATGTATACACATCCATCATTCTATATGTCTATTGATTCAAGTTCTTAGGACGCTCAACGTCGGTGTAATTTGGAAGTGCAGGAGATGGGGTTGACAAATGAGATAAAAGGGTTGGAGGAGCACAAGAGGCTTGTGGAGGAACTCCCAGATATGGACCTCACTCACAGAACCAGAAGGCTCAGGCAAGCCTGTTTCAAAGCCAATTACAAGAAGAAGCGAAGGTCCAATGTTGCTGCTCGTCACTAA

mRNA sequence

ATGGAGCCCAGCACCAAACTACACCCACACGACTTTGACTTTGAGTGGCCATATCACCAACATATTTTCCCCTTCGACCACGAAGCACTAGAGCTTCCTCCATTAGATGTCGATGGATCCTTCGACTTCAACTCGCTGTCCTTACCATTCCATTGGGATGATATTTCCGAGTTGGAGGCTGAAATTTTGTCGTTGGACAAACACATGATACCAGTTACACCACTTTATGAGGAGCACATGGTGGCCGATGAGACGAAGCCGGAGAGAATGGTGAAATTAAAAGACGACGATATGAGTAGGGAGTTGCAGGAGGTGACAAGGATGATTGAAACAGGGCTTTCAAGTTGTAAAGAAGAAGAAGAAGAAGAGTATGAAAGGAGGGTGAGATTAATAATGAGAAACGGGAGGAGAACGAATTCAGTGTTGGGATTGGAAGAGATTCAAAAGCACTTTCATATCCCAATAACAGAGGCCGCAAAAGCGATGAATGTGGGTTTGACAGTGCTTAAAAGGAGGTGCAGAGAACTTCATATAATGAGATGGCCTCATAGAAAGCTCAAGAGCTTGAACTCTCTCATTACAAATGTCCAGGAGATGGGGTTGACAAATGAGATAAAAGGGTTGGAGGAGCACAAGAGGCTTGTGGAGGAACTCCCAGATATGGACCTCACTCACAGAACCAGAAGGCTCAGGCAAGCCTGTTTCAAAGCCAATTACAAGAAGAAGCGAAGGTCCAATGTTGCTGCTCGTCACTAA

Coding sequence (CDS)

ATGGAGCCCAGCACCAAACTACACCCACACGACTTTGACTTTGAGTGGCCATATCACCAACATATTTTCCCCTTCGACCACGAAGCACTAGAGCTTCCTCCATTAGATGTCGATGGATCCTTCGACTTCAACTCGCTGTCCTTACCATTCCATTGGGATGATATTTCCGAGTTGGAGGCTGAAATTTTGTCGTTGGACAAACACATGATACCAGTTACACCACTTTATGAGGAGCACATGGTGGCCGATGAGACGAAGCCGGAGAGAATGGTGAAATTAAAAGACGACGATATGAGTAGGGAGTTGCAGGAGGTGACAAGGATGATTGAAACAGGGCTTTCAAGTTGTAAAGAAGAAGAAGAAGAAGAGTATGAAAGGAGGGTGAGATTAATAATGAGAAACGGGAGGAGAACGAATTCAGTGTTGGGATTGGAAGAGATTCAAAAGCACTTTCATATCCCAATAACAGAGGCCGCAAAAGCGATGAATGTGGGTTTGACAGTGCTTAAAAGGAGGTGCAGAGAACTTCATATAATGAGATGGCCTCATAGAAAGCTCAAGAGCTTGAACTCTCTCATTACAAATGTCCAGGAGATGGGGTTGACAAATGAGATAAAAGGGTTGGAGGAGCACAAGAGGCTTGTGGAGGAACTCCCAGATATGGACCTCACTCACAGAACCAGAAGGCTCAGGCAAGCCTGTTTCAAAGCCAATTACAAGAAGAAGCGAAGGTCCAATGTTGCTGCTCGTCACTAA

Protein sequence

MEPSTKLHPHDFDFEWPYHQHIFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELEAEILSLDKHMIPVTPLYEEHMVADETKPERMVKLKDDDMSRELQEVTRMIETGLSSCKEEEEEEYERRVRLIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKRRSNVAARH

Homology

[Close]

BLAST of Cp4.1LG09g00300 vs. ExPASy Swiss-Prot
Match: Q9LVU8 (Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-29
Identity = 62/108 (57.41%), Postives = 85/108 (78.70%), Query Frame = 0


Query: 136 RRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITN 195
           ++    L + EI++ F  PI +AAK +NVGLTVLK+RCREL I RWPHRKLKSLNSLI N
Sbjct: 142 KKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKN 201

Query: 196 VQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKR 244
           ++ +G+  E+K LEEH+ L+E+ PD +L+  T++LRQACFKANYK+++
Sbjct: 202 LKNVGMEEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRK 249

[Close]

BLAST of Cp4.1LG09g00300 vs. ExPASy Swiss-Prot
Match: Q9CA66 (Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-26
Identity = 90/237 (37.97%), Postives = 138/237 (58.23%), Query Frame = 0


Query: 40  SFDFNSLSLP-FHW-DDISELE----AEILSLDKHMIP---VTPLYEEHMVA------DE 99
           SFD +SLS P F W +D+  L+    ++        +P   + PL E+ + +      +E
Sbjct: 20  SFDHSSLSYPLFDWEEDLLALQENSGSQAFPFTTTSLPLPDLEPLSEDVLNSYSSASWNE 79

Query: 100 TKPERMVKLKDDDMSRELQEVTRMIETGLSSCKEEEEEEYERRVRLIMRNGRRTNS---- 159
           T+  R     D   S + +E   + ET  +  ++  E   E  VR+I      T S    
Sbjct: 80  TEQNR----GDGASSEKKRENGTVKET--TKKRKINERHREHSVRIISDITTYTTSSAPT 139

Query: 160 VLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITNVQEM- 219
            L  E + ++F++PIT+AA A+NVGLT+LKRRCREL I RWPHRKL SLN+LI+NV+E+ 
Sbjct: 140 TLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLISNVKELQ 199

Query: 220 ---------GLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKRRSNV 248
                     L + ++ LE+ KR +E+LPD++   +T+RLRQACFKAN+K+K++ ++
Sbjct: 200 KMEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRKKKRSL 250

[Close]

BLAST of Cp4.1LG09g00300 vs. ExPASy Swiss-Prot
Match: Q9M9U9 (Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.0e-26
Identity = 65/142 (45.77%), Postives = 93/142 (65.49%), Query Frame = 0


Query: 117 KEEEEEEYERRVRLIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCREL 176
           K E     +RR R    +    +  L  E I  +F++PIT+AA+ +N+GLT+LK+RCREL
Sbjct: 103 KSETTTTKKRRCREECFSSCSVSKTLSKETISLYFYMPITQAARELNIGLTLLKKRCREL 162

Query: 177 HIMRWPHRKLKSLNSLITNVQEM----------GLTNEIKGLEEHKRLVEELPDMDLTHR 236
            I RWPHRKL SL  LI+NV+E+           L N ++ LE+ K+ +E+LPD+    +
Sbjct: 163 GIKRWPHRKLMSLQKLISNVKELEKMEGEENEDKLRNALEKLEKEKKTIEKLPDLKFEDK 222

Query: 237 TRRLRQACFKANYKKKRRSNVA 249
           T+RLRQACFKAN+K+KRRS ++
Sbjct: 223 TKRLRQACFKANHKRKRRSGMS 244

[Close]

BLAST of Cp4.1LG09g00300 vs. ExPASy Swiss-Prot
Match: Q9FGD1 (Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.9e-25
Identity = 60/136 (44.12%), Postives = 95/136 (69.85%), Query Frame = 0


Query: 122 EEYERRVRLIMRNGRRTNSV---LGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHI 181
           +E   + R+IM+   R + V   +  E ++++F++PIT+AAK +N+G+T+LK+RCREL I
Sbjct: 136 KEKTSQKRIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRELGI 195

Query: 182 MRWPHRKLKSLNSLITNVQEM-----------GLTNEIKGLEEHKRLVEELPDMDLTHRT 241
            RWPHRKL SLN+LI N++++            L N ++ LE  K+++EE+PD++   +T
Sbjct: 196 PRWPHRKLTSLNALIANLKDLLGNTKGRTPKSKLRNALELLEMEKKMIEEVPDLEFGDKT 255

Query: 242 RRLRQACFKANYKKKR 244
           +RLRQACFKA YK++R
Sbjct: 256 KRLRQACFKAKYKRRR 271

[Close]

BLAST of Cp4.1LG09g00300 vs. ExPASy Swiss-Prot
Match: O81791 (Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.1e-15
Identity = 73/260 (28.08%), Postives = 123/260 (47.31%), Query Frame = 0


Query: 22  IFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELEAEILSLDKHMIPVTPLYEEHMV 81
           +F F+H     P L          LS     +DI  L  E+  + +  +  + +YEE   
Sbjct: 115 VFRFNHSLPRFPTL--------LCLSRNPKLEDIPNLANELKFISE--LKPSKIYEEEQC 174

Query: 82  ADET---------KPERMVKLKD-----DDMSRELQEVTRMIETGLSSCKEEEEEEYERR 141
           +  T         KP ++V  +D     D  +   + V    E       + E+ E + +
Sbjct: 175 SSSTEGYYNSDLPKPRKLVLKQDLNCLPDSETESEESVNEKTEHSEFENDKTEQSESDAK 234

Query: 142 VRLIMRNGR---RTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHR 201
             ++ +  R   R  + L LEE+ K+F + I EA++ + VGLTVLK++CRE  I RWPHR
Sbjct: 235 TEILKKKKRTPSRHVAELSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHR 294

Query: 202 KLKSLNSLITNVQE-------------MGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLR 252
           K+KSL+ LI ++Q              M +  + + LE  KR + + P M++   T++ R
Sbjct: 295 KIKSLDCLIHDLQREAEKQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFR 354

[Close]

BLAST of Cp4.1LG09g00300 vs. NCBI nr
Match: XP_022968161.1 (protein RKD4 [Cucurbita maxima])

HSP 1 Score: 461 bits (1187), Expect = 3.71e-163
Identity = 235/252 (93.25%), Postives = 243/252 (96.43%), Query Frame = 0


Query: 1   MEPSTKLHPHDFDFEWPYHQHIFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELEA 60
           MEPSTKLHPHDFDF WPYHQH+FPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELE+
Sbjct: 1   MEPSTKLHPHDFDFGWPYHQHLFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELES 60

Query: 61  EILSLDKHMIPVTPLYEEHMVA-DETKPERMVKLKDDDMSRELQEVTRMIETGLSSCKEE 120
           EILSLDKHMIPVTPLYEE MVA DETKPERMVKLKDDDMSRELQEVTRMIETGLS+ KEE
Sbjct: 61  EILSLDKHMIPVTPLYEEDMVAVDETKPERMVKLKDDDMSRELQEVTRMIETGLSNWKEE 120

Query: 121 EEEEYERRVRLIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIM 180
           EEE  E+RVRLIMRNGRR +SVLGLEEIQKHFHIPITEAAKAM+VGLTVLKRRCREL+IM
Sbjct: 121 EEE-CEKRVRLIMRNGRRKSSVLGLEEIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIM 180

Query: 181 RWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKANY 240
           RWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELP+MDLTHRTRRLRQACFKANY
Sbjct: 181 RWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANY 240

Query: 241 KKKRRSNVAARH 251
           KKKRRSNVA  H
Sbjct: 241 KKKRRSNVAVLH 251

[Close]

BLAST of Cp4.1LG09g00300 vs. NCBI nr
Match: XP_022945007.1 (protein RKD2 [Cucurbita moschata])

HSP 1 Score: 441 bits (1135), Expect = 3.48e-155
Identity = 228/252 (90.48%), Postives = 236/252 (93.65%), Query Frame = 0


Query: 1   MEPSTKLHPHDFDFEWPYHQHIFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELEA 60
           MEPS KLHPHDFDFEWPYHQH+FPFDHEALELPPLDVD SFDFNSLSLPFHWDDISELEA
Sbjct: 1   MEPSAKLHPHDFDFEWPYHQHLFPFDHEALELPPLDVDASFDFNSLSLPFHWDDISELEA 60

Query: 61  EILSLDKHMIPVTPLYEEHMVA-DETKPERMVKLKDDD-MSRELQEVTRMIETGLSSCKE 120
           EIL LDKHMIPVTPL +E M+A DETK ERMVKLKD+D  SRELQE TR+IETGLSSCKE
Sbjct: 61  EILWLDKHMIPVTPLNDEDMLAVDETKAERMVKLKDNDGTSRELQEETRVIETGLSSCKE 120

Query: 121 -EEEEEYERRVRLIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELH 180
            EEEEE ERR+RLIMRNGRR + VLGL+EIQKHF IPITEAAKAMNVGLTVLKRRCRELH
Sbjct: 121 NEEEEECERRMRLIMRNGRRKSKVLGLDEIQKHFDIPITEAAKAMNVGLTVLKRRCRELH 180

Query: 181 IMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKA 240
           IMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPD DLTHRTRRLRQACFKA
Sbjct: 181 IMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDTDLTHRTRRLRQACFKA 240

Query: 241 NYKKKRRSNVAA 249
           NYKKKRRSNVAA
Sbjct: 241 NYKKKRRSNVAA 252

[Close]

BLAST of Cp4.1LG09g00300 vs. NCBI nr
Match: XP_023542025.1 (protein RKD2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439 bits (1129), Expect = 6.31e-154
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 29  ALELPPLDVDGSFDFNSLSLPFHWDDISELEAEILSLDKHMIPVTPLYEEHMVADETKPE 88
           ALELPPLDVDGSFDFNSLSLPFHWDDISELEAEILSLDKHMIPVTPLYEEHMVADETKPE
Sbjct: 54  ALELPPLDVDGSFDFNSLSLPFHWDDISELEAEILSLDKHMIPVTPLYEEHMVADETKPE 113

Query: 89  RMVKLKDDDMSRELQEVTRMIETGLSSCKEEEEEEYERRVRLIMRNGRRTNSVLGLEEIQ 148
           RMVKLKDDDMSRELQEVTRMIETGLSSCKEEEEEEYERRVRLIMRNGRRTNSVLGLEEIQ
Sbjct: 114 RMVKLKDDDMSRELQEVTRMIETGLSSCKEEEEEEYERRVRLIMRNGRRTNSVLGLEEIQ 173

Query: 149 KHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITNVQEMGLTNEIKGL 208
           KHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITNVQEMGLTNEIKGL
Sbjct: 174 KHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITNVQEMGLTNEIKGL 233

Query: 209 EEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKRRSNVAARH 251
           EEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKRRSNVAARH
Sbjct: 234 EEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKRRSNVAARH 276

[Close]

BLAST of Cp4.1LG09g00300 vs. NCBI nr
Match: KAG6574250.1 (Protein RKD4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 435 bits (1118), Expect = 1.35e-152
Identity = 227/252 (90.08%), Postives = 234/252 (92.86%), Query Frame = 0


Query: 1   MEPSTKLHPHDFDFEWPYHQHIFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELEA 60
           MEPSTKLHPHDFDFEWPYHQH+FPFDHEALELPPLDVD SFDFNSLSLPF WDDISELEA
Sbjct: 1   MEPSTKLHPHDFDFEWPYHQHLFPFDHEALELPPLDVDASFDFNSLSLPFPWDDISELEA 60

Query: 61  EILSLDKHMIPVTPLYEEHMVA-DETKPERMVKLKDDD-MSRELQEVTRMIETGLSSCKE 120
           EIL LDKHMIPVTPL +E MVA DETK ERMVKLKD+D  SRELQE TR+IET LSSCKE
Sbjct: 61  EILWLDKHMIPVTPLNDEDMVAVDETKAERMVKLKDNDGTSRELQEETRVIETELSSCKE 120

Query: 121 E-EEEEYERRVRLIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELH 180
           + EEEE ERR+RLIMRN RR  S LGL+EIQKHFHIPITEAAKAMNVGLTVLKRRCRELH
Sbjct: 121 KGEEEECERRMRLIMRNRRRKISALGLDEIQKHFHIPITEAAKAMNVGLTVLKRRCRELH 180

Query: 181 IMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKA 240
           IMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKA
Sbjct: 181 IMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKA 240

Query: 241 NYKKKRRSNVAA 249
           NYKKKRRSNV A
Sbjct: 241 NYKKKRRSNVDA 252

[Close]

BLAST of Cp4.1LG09g00300 vs. NCBI nr
Match: KAG7013319.1 (Protein RKD2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 429 bits (1104), Expect = 2.73e-150
Identity = 228/263 (86.69%), Postives = 235/263 (89.35%), Query Frame = 0


Query: 1   MEPSTKLHPHDFDFEWPYHQHIFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELEA 60
           MEPSTKLHPHDFDFEWPYHQH+FPFDHEALELPPLDVD SFDFNSLSLPF WDDISELEA
Sbjct: 1   MEPSTKLHPHDFDFEWPYHQHLFPFDHEALELPPLDVDASFDFNSLSLPFPWDDISELEA 60

Query: 61  EILSLDKHMIPVTPLYEEHMVA-DETKPERMVKLKDDD-MSRELQEVTRMIETGLSSCKE 120
           EIL LDKHMIPVTPL +E MVA DETK ERMVKLKD+D  SRELQE TR+IETGLSSCKE
Sbjct: 61  EILWLDKHMIPVTPLNDEDMVAVDETKAERMVKLKDNDGTSRELQEETRVIETGLSSCKE 120

Query: 121 E-EEEEYERRVRLIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELH 180
           + EEEE ERR+RLIMRN RR  S LGL+EIQKHFHIPITEAAKAMNVGLTVLKRRCRELH
Sbjct: 121 KGEEEECERRMRLIMRNRRRKISALGLDEIQKHFHIPITEAAKAMNVGLTVLKRRCRELH 180

Query: 181 IMRWPHRKLKSLNSLITNVQ-----------EMGLTNEIKGLEEHKRLVEELPDMDLTHR 240
           IMRWPHRKLKSLNSLITNVQ           EMGLTNEIKGLEEHKRLVEELPDMDLTHR
Sbjct: 181 IMRWPHRKLKSLNSLITNVQDAQRRCNLEVQEMGLTNEIKGLEEHKRLVEELPDMDLTHR 240

Query: 241 TRRLRQACFKANYKKKRRSNVAA 249
           TRRLRQACFKANYKKKRRSNV A
Sbjct: 241 TRRLRQACFKANYKKKRRSNVDA 263

[Close]

BLAST of Cp4.1LG09g00300 vs. ExPASy TrEMBL
Match: A0A6J1HU37 (protein RKD4 OS=Cucurbita maxima OX=3661 GN=LOC111467479 PE=4 SV=1)

HSP 1 Score: 461 bits (1187), Expect = 1.80e-163
Identity = 235/252 (93.25%), Postives = 243/252 (96.43%), Query Frame = 0


Query: 1   MEPSTKLHPHDFDFEWPYHQHIFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELEA 60
           MEPSTKLHPHDFDF WPYHQH+FPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELE+
Sbjct: 1   MEPSTKLHPHDFDFGWPYHQHLFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELES 60

Query: 61  EILSLDKHMIPVTPLYEEHMVA-DETKPERMVKLKDDDMSRELQEVTRMIETGLSSCKEE 120
           EILSLDKHMIPVTPLYEE MVA DETKPERMVKLKDDDMSRELQEVTRMIETGLS+ KEE
Sbjct: 61  EILSLDKHMIPVTPLYEEDMVAVDETKPERMVKLKDDDMSRELQEVTRMIETGLSNWKEE 120

Query: 121 EEEEYERRVRLIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIM 180
           EEE  E+RVRLIMRNGRR +SVLGLEEIQKHFHIPITEAAKAM+VGLTVLKRRCREL+IM
Sbjct: 121 EEE-CEKRVRLIMRNGRRKSSVLGLEEIQKHFHIPITEAAKAMSVGLTVLKRRCRELNIM 180

Query: 181 RWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKANY 240
           RWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELP+MDLTHRTRRLRQACFKANY
Sbjct: 181 RWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPNMDLTHRTRRLRQACFKANY 240

Query: 241 KKKRRSNVAARH 251
           KKKRRSNVA  H
Sbjct: 241 KKKRRSNVAVLH 251

[Close]

BLAST of Cp4.1LG09g00300 vs. ExPASy TrEMBL
Match: A0A6J1FZR5 (protein RKD2 OS=Cucurbita moschata OX=3662 GN=LOC111449372 PE=4 SV=1)

HSP 1 Score: 441 bits (1135), Expect = 1.68e-155
Identity = 228/252 (90.48%), Postives = 236/252 (93.65%), Query Frame = 0


Query: 1   MEPSTKLHPHDFDFEWPYHQHIFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELEA 60
           MEPS KLHPHDFDFEWPYHQH+FPFDHEALELPPLDVD SFDFNSLSLPFHWDDISELEA
Sbjct: 1   MEPSAKLHPHDFDFEWPYHQHLFPFDHEALELPPLDVDASFDFNSLSLPFHWDDISELEA 60

Query: 61  EILSLDKHMIPVTPLYEEHMVA-DETKPERMVKLKDDD-MSRELQEVTRMIETGLSSCKE 120
           EIL LDKHMIPVTPL +E M+A DETK ERMVKLKD+D  SRELQE TR+IETGLSSCKE
Sbjct: 61  EILWLDKHMIPVTPLNDEDMLAVDETKAERMVKLKDNDGTSRELQEETRVIETGLSSCKE 120

Query: 121 -EEEEEYERRVRLIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELH 180
            EEEEE ERR+RLIMRNGRR + VLGL+EIQKHF IPITEAAKAMNVGLTVLKRRCRELH
Sbjct: 121 NEEEEECERRMRLIMRNGRRKSKVLGLDEIQKHFDIPITEAAKAMNVGLTVLKRRCRELH 180

Query: 181 IMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKA 240
           IMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPD DLTHRTRRLRQACFKA
Sbjct: 181 IMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDTDLTHRTRRLRQACFKA 240

Query: 241 NYKKKRRSNVAA 249
           NYKKKRRSNVAA
Sbjct: 241 NYKKKRRSNVAA 252

[Close]

BLAST of Cp4.1LG09g00300 vs. ExPASy TrEMBL
Match: A0A6J1CJM6 (protein RKD4 OS=Momordica charantia OX=3673 GN=LOC111011607 PE=4 SV=1)

HSP 1 Score: 288 bits (736), Expect = 7.95e-95
Identity = 157/249 (63.05%), Postives = 190/249 (76.31%), Query Frame = 0


Query: 1   MEPSTKLHPHDFDFEWPYHQHIFPFDHEALELPPLDVDGSFDFN---SLSLPFHWDDISE 60
           ME S+KLH +  DFEWPYH+ +F FD +ALELPPLDV G FDF+   SLSLPFHW+++S+
Sbjct: 3   MESSSKLHNNPLDFEWPYHEDLFQFD-KALELPPLDV-GLFDFDLADSLSLPFHWENLSQ 62

Query: 61  LEAEILSLDKHMIPVTPLYEEHMVADETKPERMVKLKDDDMSRELQEVTRMIETGLSSCK 120
           LE E+ S  +   P     ++HM ADE  P RM+KL+ ++   E Q+    IE G +S  
Sbjct: 63  LELELQSPPEFFSP-----DKHMTADEKPPARMIKLEYEEGQHEQQQQREQIERGFNSDS 122

Query: 121 EEEEEEYERRVRLIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELH 180
               +  E++ R  MR  R  +SVLGLEEIQ HFHIPI+EAAK MNVGLTVLK+RCREL+
Sbjct: 123 SWISDVDEKKRRNNMRLRRSKSSVLGLEEIQNHFHIPISEAAKQMNVGLTVLKKRCRELN 182

Query: 181 IMRWPHRKLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKA 240
           IMRWPHRKLKSLNSLI NV+EMGL++EIK LEEHKRLVEELPDMDLTHRT+RLRQACFKA
Sbjct: 183 IMRWPHRKLKSLNSLIKNVKEMGLSSEIKVLEEHKRLVEELPDMDLTHRTKRLRQACFKA 242

Query: 241 NYKKKRRSN 246
           NYKK+R +N
Sbjct: 243 NYKKRRSNN 244

[Close]

BLAST of Cp4.1LG09g00300 vs. ExPASy TrEMBL
Match: A0A5D3E104 (Protein RKD4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G003820 PE=4 SV=1)

HSP 1 Score: 227 bits (578), Expect = 4.75e-71
Identity = 136/250 (54.40%), Postives = 166/250 (66.40%), Query Frame = 0


Query: 12  FDFEWPYHQHIFPFDHEALELPPLDVDGSFDFNSLSL-PFHWDD--ISELEAEILSLDKH 71
           FDFEW  H+ +FP  +E  ELPPLD D   D NS SL PFH DD  + E ++E LS +  
Sbjct: 21  FDFEW-LHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDVLEFDSEFLSRELE 80

Query: 72  MIPVTPLYEEHMVADETKPERMVKLKDDDMSRELQEVTRMIETGLSSCKEEEEEEYERRV 131
           M+ +    E +  +   K E                             EEEEEE E+R+
Sbjct: 81  MVEI----ERNGFSSTWKEEE----------------------------EEEEEEGEKRL 140

Query: 132 RLIMRNG----RRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHR 191
           RL+  N     R+ + VLGLEEI+K+FHIPI+EAAK MNVGLTVLKRRCR+L+IMRWPHR
Sbjct: 141 RLMGNNNGNKRRKGSFVLGLEEIRKYFHIPISEAAKEMNVGLTVLKRRCRQLNIMRWPHR 200

Query: 192 KLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKRR 251
           K KSLNSLI NV+EMGLTNE+KGLEEHKRL+EE+P+MDLTH  +RLRQACFKANYKK RR
Sbjct: 201 KHKSLNSLIQNVKEMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRR 237

[Close]

BLAST of Cp4.1LG09g00300 vs. ExPASy TrEMBL
Match: E5GBA6 (Transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 226 bits (575), Expect = 1.15e-70
Identity = 135/250 (54.00%), Postives = 167/250 (66.80%), Query Frame = 0


Query: 12  FDFEWPYHQHIFPFDHEALELPPLDVDGSFDFNSLSL-PFHWDD--ISELEAEILSLDKH 71
           FDFEW  H+ +FP  +E  ELPPLD D   D NS SL PFH DD  + E ++E LS +  
Sbjct: 15  FDFEW-LHEDLFPLHNELDELPPLDNDELLDVNSRSLLPFHLDDNDVLEFDSEFLSRELE 74

Query: 72  MIPVTPLYEEHMVADETKPERMVKLKDDDMSRELQEVTRMIETGLSSCKEEEEEEYERRV 131
           M+ +    E +  +   K E                            +EEEEEE E+R+
Sbjct: 75  MVEI----ERNGFSSTWKEEE---------------------------EEEEEEEGEKRL 134

Query: 132 RLIMRNG----RRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHR 191
           RL+  N     R+ + VLGLEEI+K+FHIPI++AAK MNVGLTVLKRRCR+L+IMRWPHR
Sbjct: 135 RLMGNNNGNKRRKGSFVLGLEEIRKYFHIPISKAAKEMNVGLTVLKRRCRQLNIMRWPHR 194

Query: 192 KLKSLNSLITNVQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKRR 251
           K KSLNSLI NV+EMGLTNE+KGLEEHKRL+EE+P+MDLTH  +RLRQACFKANYKK RR
Sbjct: 195 KHKSLNSLIQNVKEMGLTNEVKGLEEHKRLLEEMPNMDLTHTVKRLRQACFKANYKKNRR 232

[Close]

BLAST of Cp4.1LG09g00300 vs. TAIR 10
Match: AT5G53040.1 (RWP-RK domain-containing protein )

HSP 1 Score: 131.7 bits (330), Expect = 8.1e-31
Identity = 62/108 (57.41%), Postives = 85/108 (78.70%), Query Frame = 0


Query: 136 RRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITN 195
           ++    L + EI++ F  PI +AAK +NVGLTVLK+RCREL I RWPHRKLKSLNSLI N
Sbjct: 142 KKRQDKLEMSEIKQFFDRPIMKAAKELNVGLTVLKKRCRELGIYRWPHRKLKSLNSLIKN 201

Query: 196 VQEMGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKR 244
           ++ +G+  E+K LEEH+ L+E+ PD +L+  T++LRQACFKANYK+++
Sbjct: 202 LKNVGMEEEVKNLEEHRFLIEQEPDAELSDGTKKLRQACFKANYKRRK 249

[Close]

BLAST of Cp4.1LG09g00300 vs. TAIR 10
Match: AT1G74480.1 (RWP-RK domain-containing protein )

HSP 1 Score: 121.7 bits (304), Expect = 8.4e-28
Identity = 90/237 (37.97%), Postives = 138/237 (58.23%), Query Frame = 0


Query: 40  SFDFNSLSLP-FHW-DDISELE----AEILSLDKHMIP---VTPLYEEHMVA------DE 99
           SFD +SLS P F W +D+  L+    ++        +P   + PL E+ + +      +E
Sbjct: 20  SFDHSSLSYPLFDWEEDLLALQENSGSQAFPFTTTSLPLPDLEPLSEDVLNSYSSASWNE 79

Query: 100 TKPERMVKLKDDDMSRELQEVTRMIETGLSSCKEEEEEEYERRVRLIMRNGRRTNS---- 159
           T+  R     D   S + +E   + ET  +  ++  E   E  VR+I      T S    
Sbjct: 80  TEQNR----GDGASSEKKRENGTVKET--TKKRKINERHREHSVRIISDITTYTTSSAPT 139

Query: 160 VLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHRKLKSLNSLITNVQEM- 219
            L  E + ++F++PIT+AA A+NVGLT+LKRRCREL I RWPHRKL SLN+LI+NV+E+ 
Sbjct: 140 TLSKETVSRYFYMPITQAAIALNVGLTLLKRRCRELGIRRWPHRKLMSLNTLISNVKELQ 199

Query: 220 ---------GLTNEIKGLEEHKRLVEELPDMDLTHRTRRLRQACFKANYKKKRRSNV 248
                     L + ++ LE+ KR +E+LPD++   +T+RLRQACFKAN+K+K++ ++
Sbjct: 200 KMEGEENAEKLQDALEMLEKEKRTIEDLPDLEFKDKTKRLRQACFKANHKRKKKRSL 250

[Close]

BLAST of Cp4.1LG09g00300 vs. TAIR 10
Match: AT1G18790.1 (RWP-RK domain-containing protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-27
Identity = 65/142 (45.77%), Postives = 93/142 (65.49%), Query Frame = 0


Query: 117 KEEEEEEYERRVRLIMRNGRRTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCREL 176
           K E     +RR R    +    +  L  E I  +F++PIT+AA+ +N+GLT+LK+RCREL
Sbjct: 103 KSETTTTKKRRCREECFSSCSVSKTLSKETISLYFYMPITQAARELNIGLTLLKKRCREL 162

Query: 177 HIMRWPHRKLKSLNSLITNVQEM----------GLTNEIKGLEEHKRLVEELPDMDLTHR 236
            I RWPHRKL SL  LI+NV+E+           L N ++ LE+ K+ +E+LPD+    +
Sbjct: 163 GIKRWPHRKLMSLQKLISNVKELEKMEGEENEDKLRNALEKLEKEKKTIEKLPDLKFEDK 222

Query: 237 TRRLRQACFKANYKKKRRSNVA 249
           T+RLRQACFKAN+K+KRRS ++
Sbjct: 223 TKRLRQACFKANHKRKRRSGMS 244

[Close]

BLAST of Cp4.1LG09g00300 vs. TAIR 10
Match: AT5G66990.1 (RWP-RK domain-containing protein )

HSP 1 Score: 117.1 bits (292), Expect = 2.1e-26
Identity = 60/136 (44.12%), Postives = 95/136 (69.85%), Query Frame = 0


Query: 122 EEYERRVRLIMRNGRRTNSV---LGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHI 181
           +E   + R+IM+   R + V   +  E ++++F++PIT+AAK +N+G+T+LK+RCREL I
Sbjct: 136 KEKTSQKRIIMKRRYREDGVINNMSREMMKQYFYMPITKAAKELNIGVTLLKKRCRELGI 195

Query: 182 MRWPHRKLKSLNSLITNVQEM-----------GLTNEIKGLEEHKRLVEELPDMDLTHRT 241
            RWPHRKL SLN+LI N++++            L N ++ LE  K+++EE+PD++   +T
Sbjct: 196 PRWPHRKLTSLNALIANLKDLLGNTKGRTPKSKLRNALELLEMEKKMIEEVPDLEFGDKT 255

Query: 242 RRLRQACFKANYKKKR 244
           +RLRQACFKA YK++R
Sbjct: 256 KRLRQACFKAKYKRRR 271

[Close]

BLAST of Cp4.1LG09g00300 vs. TAIR 10
Match: AT4G35590.1 (RWP-RK domain-containing protein )

HSP 1 Score: 84.3 bits (207), Expect = 1.5e-16
Identity = 73/260 (28.08%), Postives = 123/260 (47.31%), Query Frame = 0


Query: 22  IFPFDHEALELPPLDVDGSFDFNSLSLPFHWDDISELEAEILSLDKHMIPVTPLYEEHMV 81
           +F F+H     P L          LS     +DI  L  E+  + +  +  + +YEE   
Sbjct: 115 VFRFNHSLPRFPTL--------LCLSRNPKLEDIPNLANELKFISE--LKPSKIYEEEQC 174

Query: 82  ADET---------KPERMVKLKD-----DDMSRELQEVTRMIETGLSSCKEEEEEEYERR 141
           +  T         KP ++V  +D     D  +   + V    E       + E+ E + +
Sbjct: 175 SSSTEGYYNSDLPKPRKLVLKQDLNCLPDSETESEESVNEKTEHSEFENDKTEQSESDAK 234

Query: 142 VRLIMRNGR---RTNSVLGLEEIQKHFHIPITEAAKAMNVGLTVLKRRCRELHIMRWPHR 201
             ++ +  R   R  + L LEE+ K+F + I EA++ + VGLTVLK++CRE  I RWPHR
Sbjct: 235 TEILKKKKRTPSRHVAELSLEELSKYFDLTIVEASRNLKVGLTVLKKKCREFGIPRWPHR 294

Query: 202 KLKSLNSLITNVQE-------------MGLTNEIKGLEEHKRLVEELPDMDLTHRTRRLR 252
           K+KSL+ LI ++Q              M +  + + LE  KR + + P M++   T++ R
Sbjct: 295 KIKSLDCLIHDLQREAEKQQEKNEAAAMAVAKKQEKLETEKRNIVKRPFMEIGIETKKFR 354

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g00300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVU8	1.1e-29	57.41	Protein RKD4 OS=Arabidopsis thaliana OX=3702 GN=RKD4 PE=3 SV=1	[more]
Q9CA66	1.2e-26	37.97	Protein RKD2 OS=Arabidopsis thaliana OX=3702 GN=RKD2 PE=2 SV=1	[more]
Q9M9U9	2.0e-26	45.77	Protein RKD1 OS=Arabidopsis thaliana OX=3702 GN=RKD1 PE=3 SV=1	[more]
Q9FGD1	2.9e-25	44.12	Protein RKD3 OS=Arabidopsis thaliana OX=3702 GN=RKD3 PE=3 SV=1	[more]
O81791	2.1e-15	28.08	Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1	[more]

BLAST of Cp4.1LG09g00300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968161.1	3.71e-163	93.25	protein RKD4 [Cucurbita maxima]	[more]
XP_022945007.1	3.48e-155	90.48	protein RKD2 [Cucurbita moschata]	[more]
XP_023542025.1	6.31e-154	100.00	protein RKD2-like [Cucurbita pepo subsp. pepo]	[more]
KAG6574250.1	1.35e-152	90.08	Protein RKD4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7013319.1	2.73e-150	86.69	Protein RKD2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG09g00300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HU37	1.80e-163	93.25	protein RKD4 OS=Cucurbita maxima OX=3661 GN=LOC111467479 PE=4 SV=1	[more]
A0A6J1FZR5	1.68e-155	90.48	protein RKD2 OS=Cucurbita moschata OX=3662 GN=LOC111449372 PE=4 SV=1	[more]
A0A6J1CJM6	7.95e-95	63.05	protein RKD4 OS=Momordica charantia OX=3673 GN=LOC111011607 PE=4 SV=1	[more]
A0A5D3E104	4.75e-71	54.40	Protein RKD4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G003820 ...	[more]
E5GBA6	1.15e-70	54.00	Transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of Cp4.1LG09g00300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53040.1	8.1e-31	57.41	RWP-RK domain-containing protein	[more]
AT1G74480.1	8.4e-28	37.97	RWP-RK domain-containing protein	[more]
AT1G18790.1	1.4e-27	45.77	RWP-RK domain-containing protein	[more]
AT5G66990.1	2.1e-26	44.12	RWP-RK domain-containing protein	[more]
AT4G35590.1	1.5e-16	28.08	RWP-RK domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003035	RWP-RK domain	PFAM	PF02042	RWP-RK	coord: 143..189 e-value: 5.7E-23 score: 80.7
IPR003035	RWP-RK domain	PROSITE	PS51519	RWP_RK	coord: 120..211 score: 17.336285
None	No IPR available	PANTHER	PTHR46373:SF20	PROTEIN RKD1-RELATED	coord: 75..244
IPR044607	Transcription factor RKD-like	PANTHER	PTHR46373	PROTEIN RKD4	coord: 75..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g00300.1	Cp4.1LG09g00300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity