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Cp4.1LG08g13800 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTAGGCGCAACCAAAGCGGGGAAGCGGCGATAGGTCAATTAAAGTTCGAATCTTTGGATAAAGTAATCAAATATTCGCGGCTCCCAAATCCGCCCGCTGTTTTTGTTTTCTTCACCTTATCTTTCTTATTTTCATCTTTAACGCCGTCTTCTTTCCTTCAAACCTTCCGCCCTTCCATTTATGGTTTTGTTCTATGAATCACACCCCTTTCCCCTTGTTTTCCTTCTTCTTTTCTTTGATTAATCTAGCTTCGATTCTGTTTTTNTCTTATCCTTCTTACTTTCATCTTTAACGCCGTCTTCTTTCCTTCAAACCTTCCGCCCTTCCATTTATGGTTTTGTTCTATGAATCACACCCCTTTCCCCTTGTTTTCCTTCTTCTTTTCTTTGATTAATCTAGCTTCGATTCTGTTTTTTCGCGATCTNCCTTATCTTTCTTATTTTCATCTTTAACGCCGTCTTCTTTCCTTCAAACCTTCCGCCCTTCCATTTATGGTTTTGTTCTATGAATCACACCCCTTTCCCCTTGTTTTCCTTCTTCTTTTCTTTGATTAATCTAGCTTCGATTCTGTTTTTTCGCGATCTGGGTTTCTAAGTTTATTCGATTCCAATTACTCCTTCAGATCTGATCGGGGGTTTTTATTTTTTCCCGCCCAAATCGCTTGATGAGGGACTGTTTTGATCTTCTTCTTTGCATTGTTTTCATGGATCTTAGGTAGCTTATCCGATTGATTGATTNACGCCCAAATCGCTAGATGGGGGACTGTTTGGATCTTCTTCTTTGAATTGTTTTCATGGATCTTAGGTAGCTTATCCGATTGATTGATTTGTGAATTGAAACTAGATAGGTCTCTGGGTATTTGTGGTGTGCTGTTAATTATTGGGGTTTTCTTACGATGGTCACTGTTAATCTTGGAATGCTTCATTATGTGTTGGACCATGTGTATGGTGCATTTGTGCACAGAACCAAGATCAGCCCACCGTTTTTCTCGAGGGGATGGGGTGGTTCGAAGCTGGATTTGCTTGAAAAGATGATCAAACAGTTGTTCCCAGATATGGTAGGCCAGAATTTGCCTCCCAGTTTGATTAGACCCATTTGGAGAACGGTTTGGGAGAATGAGAGTGCTCGTTTGAGAGAAGGGGTTTTCAAGACCCCTTGTGATGAACAGCTTCTTGCTGCATTGCCTCCCGAGAGTCATAATGCAAGGGTTGCTTTTCTCATGCCTAAATCTGTGCCAACCCACAAGATGTCTTGTGTTGTTCATTTGGCAGGTATCATGTTTTGTTTGTGATGCTTTACATAATATCAATCTTGTTTTTAGTGAATACTTATCTTGTTTACTGCTTATGTTTGTGCAACGACCGAAGCTTACCGCTAGCAGATATTGTCCTCTTTGGGCTTTTCCTTCCGGACTTCCCCTCAAGGTTTTTAGAACGCATCTGTTAGGGAGAGGTTTACACACCCTTATAAAGAATGTTTCGTTCCCCTCTCCAACTCACGGGGATGTCACAGTTTGCTACTCATTGCTACTCACGGAACATGATCTCATNCACGGGGATCTCACAGTTTGCTACTCATTGCTACTCACGGAACATGATCTCATATTTAGTAAATAATTGTAGGTGAGAAAGTTTTAGACACATTATGGTTCTCTTTGATTAAGATACCAACTAAAGCATAGCTAACTGGTTATATGTCCTAGAAAAGGCCTTCAGAAGGTTCAAATCTCCACCTCTCGAACGCAAAATTAGAATTATAGTTTCTTTGGAATCTCTCTTTTTCTTTTTTCTTCTGATCATGTATATATGTTTGTTGTTCAATGAATATCAATCTCATTGACTGAATGAAGTGCTTCTCTATTGTAAAGGTCAGATGATAACCCTACACAAACAACTATTTTGCAGGGACTGGAGACCATACATTTGAAAGGCGACTACGTCTTGGAGGGCCATTGTTGAAGGAAAACATTGCAACCATGGTGCTTGAGAGGTATGCTTTATCCTGCTCTGTTAAATGAAACTAAAGTTACTAATAATGTTATGCAAAACTTTAAGTTATTAATTTCGTGTCAAATATTCGACTACAGTCCTTTCTATGGTCAGCGACGACCCATGCTGCAATCTGGTGCCAAACTCTTGTGTGTTAGTGACTTGCTTTTGTTGGGAAGAGCAACCATTGAAGAGGCTCGCGGTCTTTTACATTGGTTAGACTCTGAGGCAGGGTTTGGAAAGATGGGTATTTGTGGGCTTAGCATGGGTATGCCTCAATCTAGATACCTTGGCATTATGGTTATGAAGCTACTCACTAAATTTCATGGACTAAATCATTACATATTGAAGTTTTGGCATTAAATCCTTACTTTGAGAGCCTAGATTAAATTTTAAATCTGACATATGTTTGCATTTAAGCAGTCATTTATGAAACAAATTCCTAAGNCAGAAACAAATTCCTAAGTTGAACCCATTTATGAAATTTAGGAGGAGTACATGCTGCAATGGTTGNATGAAACAAATTCCTAAGTTGGACCCATTTATGAAATTTAGGAGGAGTACATGCTGCAATGGTTGGATCTCTACACCCTACACCGATTGCGACGTTTCCTTTTCTTTCTCCACACTCTGCTGTTGTAGCATTCTGTGAGGGAATTTTAAAGCATGGAACTGCTTGGGAAGCATTAAGACAGGATCTTGCATTGCAGAAGTCTGCCATGACTCTTGAGGAGGTTAGAGAACGGATGCGGAATGTACTCTCTCTCACAGACGTCACACGCTTTCCGATCCCGAAAAATCCCAATGCTGTCATACTTGTTGCAGCTACTGTAAGTTCTTGATCCTGCTTTACTACATTCAATACATTTCTCAAGTGTTCTGCTTTCCTTGTATCTCTAAATGTGCTGATATGGAGTCTTATGCCATTCATATATATCGAGTTCGGTTACTCATGCTTAGTTCTTAATATGTAATCTTGTTGCTTGTATTTTCTGTGCTATATAGTATACTACTATAGCGTCTGATGTTCATGAGGTTATATAAACTCTTTCATTCGCATAGTACTTTTACATTTATAATGTGTCCGTTAAAGCTCTTTCCTTTTGTTTAAAGAATTGGAGCACTCTCTTGTAAGCTTTTGTGGCCTGCCGTCTGTTCTATTATTCTTCTGGTTTCAAGTTTGGTTTCTTAATGAATTTTGATTGAACTCTGAGAGATGTATTCTGAAGCCTGCGTTCGTGTTGCTTTACGACACGGTTTGTTTGTTGCTATTTTGTTCTCTACTTTTCGCATTGAAGCTTAGTTCGAACACTTTCGAGTTTCAGGACGATGGCTACATTCCGAAACACTCTGTGCTCGAGCTACAGAAAGCTTGGCCTGGTTCAGAAGTAAGATGGGTGACTGGTGGTCATGTATCTTCCTTCATTCTACACAATAACGAGTTTCGTCGGGCGATTGTTGATGGGCTCGACAGACTCGAATGGAAAGAATCGCCATTGTGACACGAAAGCTTTGCACCAAACATGTAAAGATGGTTGCCTATTTCTTTCTTTCTTTCTTGTTTTCTTCTTATTCTGTGGATTTGTATCATTCAACCTGTAAATCTGATATGATACTATTCTGCGATGTCTTCTCTCTTCCTAATTTCACGTTCATAGGTATAAACATTAGACAACTCTATTCAGAAGCAATGCCTGCATCTTTCGTTGTAATTTATATAACAATGGTGTGATCGCACTCGAATCAGACCCAACTCGTGGTTTATTTGACACGTTCAACTTTGC TGTAGGCGCAACCAAAGCGGGGAAGCGGCGATAGGTCAATTAAAGTTCGAATCTTTGGATAAAGTAATCAAATATTCGCGGCTCCCAAATCCGCCCGCTGTTTTTGTTTTCTTCACCTTATCTTTCTTATTTTCATCTTTAACGCCGTCTTCTTTCCTTCAAACCTTCCGCCCTTCCATTTATGGTTTTGTTCTATGAATCACACCCCTTTCCCCTTGTTTTCCTTCTTCTTTTCTTTGATTAATCTAGCTTCGATTCTGTTTTTNTCTTATCCTTCTTACTTTCATCTTTAACGCCGTCTTCTTTCCTTCAAACCTTCCGCCCTTCCATTTATGGTTTTGTTCTATGAATCACACCCCTTTCCCCTTGTTTTCCTTCTTCTTTTCTTTGATTAATCTAGCTTCGATTCTGTTTTTTCGCGATCTNCCTTATCTTTCTTATTTTCATCTTTAACGCCGTCTTCTTTCCTTCAAACCTTCCGCCCTTCCATTTATGGTTTTGTTCTATGAATCACACCCCTTTCCCCTTGTTTTCCTTCTTCTTTTCTTTGATTAATCTAGCTTCGATTCTGTTTTTTCGCGATCTGGGTTTCTAAGTTTATTCGATTCCAATTACTCCTTCAGATCTGATCGGGGGTTTTTATTTTTTCCCGCCCAAATCGCTTGATGAGGGACTGTTTTGATCTTCTTCTTTGCATTGTTTTCATGGATCTTAGGTAGCTTATCCGATTGATTGATTNACGCCCAAATCGCTAGATGGGGGACTGTTTGGATCTTCTTCTTTGAATTGTTTTCATGGATCTTAGGTAGCTTATCCGATTGATTGATTTGTGAATTGAAACTAGATAGGTCTCTGGGTATTTGTGGTGTGCTGTTAATTATTGGGGTTTTCTTACGATGGTCACTGTTAATCTTGGAATGCTTCATTATGTGTTGGACCATGTGTATGGTGCATTTGTGCACAGAACCAAGATCAGCCCACCGTTTTTCTCGAGGGGATGGGGTGGTTCGAAGCTGGATTTGCTTGAAAAGATGATCAAACAGTTGTTCCCAGATATGGTAGGCCAGAATTTGCCTCCCAGTTTGATTAGACCCATTTGGAGAACGGTTTGGGAGAATGAGAGTGCTCGTTTGAGAGAAGGGGTTTTCAAGACCCCTTGTGATGAACAGCTTCTTGCTGCATTGCCTCCCGAGAGTCATAATGCAAGGGTTGCTTTTCTCATGCCTAAATCTGTGCCAACCCACAAGATGTCTTGTGTTGTTCATTTGGCAGGGACTGGAGACCATACATTTGAAAGGCGACTACGTCTTGGAGGGCCATTGTTGAAGGAAAACATTGCAACCATGGTGCTTGAGAGTCCTTTCTATGGTCAGCGACGACCCATGCTGCAATCTGGTGCCAAACTCTTGTGTGTTAGTGACTTGCTTTTGTTGGGAAGAGCAACCATTGAAGAGGCTCGCGGTCTTTTACATTGGTTAGACTCTGAGGCAGGGTTTGGAAAGATGGGTATTTGTGGGCTTAGCATGGGAGGAGTACATGCTGCAATGGTTGGATCTCTACACCCTACACCGATTGCGACGTTTCCTTTTCTTTCTCCACACTCTGCTGTTGTAGCATTCTGTGAGGGAATTTTAAAGCATGGAACTGCTTGGGAAGCATTAAGACAGGATCTTGCATTGCAGAAGTCTGCCATGACTCTTGAGGAGGTTAGAGAACGGATGCGGAATGTACTCTCTCTCACAGACGTCACACGCTTTCCGATCCCGAAAAATCCCAATGCTGTCATACTTGTTGCAGCTACTGACGATGGCTACATTCCGAAACACTCTGTGCTCGAGCTACAGAAAGCTTGGCCTGGTTCAGAAGTAAGATGGGTGACTGGTGGTCATGTATCTTCCTTCATTCTACACAATAACGAGTTTCGTCGGGCGATTGTTGATGGGCTCGACAGACTCGAATGGAAAGAATCGCCATTGTGACACGAAAGCTTTGCACCAAACATGTAAAGATGGTTGCCTATTTCTTTCTTTCTTTCTTGTTTTCTTCTTATTCTGTGGATTTGTATCATTCAACCTGTAAATCTGATATGATACTATTCTGCGATGTCTTCTCTCTTCCTAATTTCACGTTCATAGGTATAAACATTAGACAACTCTATTCAGAAGCAATGCCTGCATCTTTCGTTGTAATTTATATAACAATGGTGTGATCGCACTCGAATCAGACCCAACTCGTGGTTTATTTGACACGTTCAACTTTGC ATGGTCACTGTTAATCTTGGAATGCTTCATTATGTGTTGGACCATGTGTATGGTGCATTTGTGCACAGAACCAAGATCAGCCCACCGTTTTTCTCGAGGGGATGGGGTGGTTCGAAGCTGGATTTGCTTGAAAAGATGATCAAACAGTTGTTCCCAGATATGGTAGGCCAGAATTTGCCTCCCAGTTTGATTAGACCCATTTGGAGAACGGTTTGGGAGAATGAGAGTGCTCGTTTGAGAGAAGGGGTTTTCAAGACCCCTTGTGATGAACAGCTTCTTGCTGCATTGCCTCCCGAGAGTCATAATGCAAGGGTTGCTTTTCTCATGCCTAAATCTGTGCCAACCCACAAGATGTCTTGTGTTGTTCATTTGGCAGGGACTGGAGACCATACATTTGAAAGGCGACTACGTCTTGGAGGGCCATTGTTGAAGGAAAACATTGCAACCATGGTGCTTGAGAGTCCTTTCTATGGTCAGCGACGACCCATGCTGCAATCTGGTGCCAAACTCTTGTGTGTTAGTGACTTGCTTTTGTTGGGAAGAGCAACCATTGAAGAGGCTCGCGGTCTTTTACATTGGTTAGACTCTGAGGCAGGGTTTGGAAAGATGGGTATTTGTGGGCTTAGCATGGGAGGAGTACATGCTGCAATGGTTGGATCTCTACACCCTACACCGATTGCGACGTTTCCTTTTCTTTCTCCACACTCTGCTGTTGTAGCATTCTGTGAGGGAATTTTAAAGCATGGAACTGCTTGGGAAGCATTAAGACAGGATCTTGCATTGCAGAAGTCTGCCATGACTCTTGAGGAGGTTAGAGAACGGATGCGGAATGTACTCTCTCTCACAGACGTCACACGCTTTCCGATCCCGAAAAATCCCAATGCTGTCATACTTGTTGCAGCTACTGACGATGGCTACATTCCGAAACACTCTGTGCTCGAGCTACAGAAAGCTTGGCCTGGTTCAGAAGTAAGATGGGTGACTGGTGGTCATGTATCTTCCTTCATTCTACACAATAACGAGTTTCGTCGGGCGATTGTTGATGGGCTCGACAGACTCGAATGGAAAGAATCGCCATTGTGA MVTVNLGMLHYVLDHVYGAFVHRTKISPPFFSRGWGGSKLDLLEKMIKQLFPDMVGQNLPPSLIRPIWRTVWENESARLREGVFKTPCDEQLLAALPPESHNARVAFLMPKSVPTHKMSCVVHLAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPMLQSGAKLLCVSDLLLLGRATIEEARGLLHWLDSEAGFGKMGICGLSMGGVHAAMVGSLHPTPIATFPFLSPHSAVVAFCEGILKHGTAWEALRQDLALQKSAMTLEEVRERMRNVLSLTDVTRFPIPKNPNAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFILHNNEFRRAIVDGLDRLEWKESPL Homology
BLAST of Cp4.1LG08g13800 vs. ExPASy Swiss-Prot
Match: Q8C1A9 (Protein ABHD18 OS=Mus musculus OX=10090 GN=Abhd18 PE=2 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 7.3e-38 Identity = 124/454 (27.31%), Postives = 191/454 (42.07%), Query Frame = 0
BLAST of Cp4.1LG08g13800 vs. ExPASy Swiss-Prot
Match: Q0P651 (Protein ABHD18 OS=Homo sapiens OX=9606 GN=ABHD18 PE=2 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 9.5e-38 Identity = 118/411 (28.71%), Postives = 186/411 (45.26%), Query Frame = 0
BLAST of Cp4.1LG08g13800 vs. ExPASy Swiss-Prot
Match: Q4V7A8 (Protein ABHD18 OS=Rattus norvegicus OX=10116 GN=Abhd18 PE=2 SV=2) HSP 1 Score: 153.3 bits (386), Expect = 5.2e-36 Identity = 122/454 (26.87%), Postives = 189/454 (41.63%), Query Frame = 0
BLAST of Cp4.1LG08g13800 vs. ExPASy Swiss-Prot
Match: P9WL66 (Uncharacterized protein MT2702 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2702 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 2.4e-04 Identity = 59/220 (26.82%), Postives = 89/220 (40.45%), Query Frame = 0
BLAST of Cp4.1LG08g13800 vs. ExPASy Swiss-Prot
Match: P9WL67 (Uncharacterized protein Rv2627c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2627c PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 2.4e-04 Identity = 59/220 (26.82%), Postives = 89/220 (40.45%), Query Frame = 0
BLAST of Cp4.1LG08g13800 vs. NCBI nr
Match: XP_023538802.1 (protein ABHD18 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 736 bits (1901), Expect = 2.52e-268 Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0
BLAST of Cp4.1LG08g13800 vs. NCBI nr
Match: XP_022931884.1 (protein ABHD18 [Cucurbita moschata] >XP_022971218.1 protein ABHD18 [Cucurbita maxima] >KAG6596225.1 Protein ABHD18, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 734 bits (1895), Expect = 2.07e-267 Identity = 359/360 (99.72%), Postives = 359/360 (99.72%), Query Frame = 0
BLAST of Cp4.1LG08g13800 vs. NCBI nr
Match: XP_022154285.1 (protein ABHD18 [Momordica charantia]) HSP 1 Score: 708 bits (1828), Expect = 3.38e-257 Identity = 343/360 (95.28%), Postives = 353/360 (98.06%), Query Frame = 0
BLAST of Cp4.1LG08g13800 vs. NCBI nr
Match: XP_008443082.1 (PREDICTED: protein ABHD18 [Cucumis melo] >KAA0043714.1 protein ABHD18 [Cucumis melo var. makuwa] >TYK25420.1 protein ABHD18 [Cucumis melo var. makuwa]) HSP 1 Score: 704 bits (1816), Expect = 2.28e-255 Identity = 340/360 (94.44%), Postives = 353/360 (98.06%), Query Frame = 0
BLAST of Cp4.1LG08g13800 vs. NCBI nr
Match: XP_038906354.1 (protein ABHD18 [Benincasa hispida]) HSP 1 Score: 701 bits (1810), Expect = 1.88e-254 Identity = 338/360 (93.89%), Postives = 351/360 (97.50%), Query Frame = 0
BLAST of Cp4.1LG08g13800 vs. ExPASy TrEMBL
Match: A0A6J1I678 (protein ABHD18 OS=Cucurbita maxima OX=3661 GN=LOC111470008 PE=4 SV=1) HSP 1 Score: 734 bits (1895), Expect = 1.00e-267 Identity = 359/360 (99.72%), Postives = 359/360 (99.72%), Query Frame = 0
BLAST of Cp4.1LG08g13800 vs. ExPASy TrEMBL
Match: A0A6J1EVG9 (protein ABHD18 OS=Cucurbita moschata OX=3662 GN=LOC111438135 PE=4 SV=1) HSP 1 Score: 734 bits (1895), Expect = 1.00e-267 Identity = 359/360 (99.72%), Postives = 359/360 (99.72%), Query Frame = 0
BLAST of Cp4.1LG08g13800 vs. ExPASy TrEMBL
Match: A0A6J1DJ72 (protein ABHD18 OS=Momordica charantia OX=3673 GN=LOC111021576 PE=4 SV=1) HSP 1 Score: 708 bits (1828), Expect = 1.64e-257 Identity = 343/360 (95.28%), Postives = 353/360 (98.06%), Query Frame = 0
BLAST of Cp4.1LG08g13800 vs. ExPASy TrEMBL
Match: A0A5D3DQ75 (Protein ABHD18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005630 PE=4 SV=1) HSP 1 Score: 704 bits (1816), Expect = 1.11e-255 Identity = 340/360 (94.44%), Postives = 353/360 (98.06%), Query Frame = 0
BLAST of Cp4.1LG08g13800 vs. ExPASy TrEMBL
Match: A0A1S3B7Y7 (protein ABHD18 OS=Cucumis melo OX=3656 GN=LOC103486787 PE=4 SV=1) HSP 1 Score: 704 bits (1816), Expect = 1.11e-255 Identity = 340/360 (94.44%), Postives = 353/360 (98.06%), Query Frame = 0
BLAST of Cp4.1LG08g13800 vs. TAIR 10
Match: AT3G12150.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2048 (InterPro:IPR019149); Has 421 Blast hits to 334 proteins in 155 species: Archae - 2; Bacteria - 147; Metazoa - 215; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). ) HSP 1 Score: 632.5 bits (1630), Expect = 2.1e-181 Identity = 293/359 (81.62%), Postives = 334/359 (93.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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