Cp4.1LG08g12550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g12550
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	CASP-like protein
Location	Cp4.1LG08: 9021863 .. 9023150 (-)
RNA-Seq Expression	Cp4.1LG08g12550
Synteny	Cp4.1LG08g12550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATAATTTAACTATAAACCTTTTTTTTTTCTTGTACACCAAAAGTTTTGTGGGCAGAAGTCAAGTTTCCATGAAATGTCCAAGCTGGACAGTTGGCACCACACGATTTACGCCACGTCACAAAGCCAACACACGTGATTGGTCCGAAGATTAGTTGGCGTGGCTTCTTTCCCAACTTCGTCACCCGCTTCCTAAACAGAGAAGCTGAGTTGTCGTTTCATAATGCCACCAAATATTTTAAAAAAAGAAACAAATCCAGTTTTCCCAAGAAAAGACTAGAAATTCCTTTTCAGTTCTTCTCACCGAAAAAAAAAAGAAAAAAGAAAAAAAGAAAAAAACCCCAATCACTAATTGTACCCATGTCAAATCCAGAAGACTCTGCAACGAAGCAAACGGCGCCGTCCGCGCTCCCGACGGTCAATGTCGGAAGGCAATCGCCGCCGCCATCTGCCAATCCGACTCCCGATGTCGAAATGCAAACGCCGGCAGCGACCAGTTCCGGGGTGTCGGAGATCCTGAGCCGGTGGGGGAGGGAAGATCTGCTAAAACGCCGCGTTTTGGCTCTGAGAGGATTTGGTCTCGTCTTTTCGTTGCTTGCTTTCCTTATCATGGCTTGCAATAGACATGGCGATTGGAAAAACTTCGACAAATACGAAGAAATCAGGTAACACAATTTCAGTCGCTTCGATTACAAACTTCTTTGCTGTTAAAAGAAACACAATTAATTAGGTATTGAAAAATTGAAACAGATACGTGTTGGCAATAGCAATTCTGTCCACTTTTTATACGGGCGCCCAAGTTTTTCGACAAATTCATGAAGTTTCAACTGCGATATCCATGTTTCCACCTCGAAAATCTGCCATAATCGACTTCATTGGAGATCAGGTTAAAGCCAATTTCGACAACAGTTCTTAATTTTTTGCAAATATGCCCTCCATCTCAACTGATATTAAAATCGGGTATGCAGATTCTGGCTTATCTGCTAATATCGGCGTCATCTTCAGCGATTCCGATGATCAACAGAATGAGAGAAGGCTCAGACAACATATTTACAGACTCATTGGCAGCTTCCATTTCCATGTCCCTTTTCGCCTTCTTGTCTTTAGCTTTGTCGGCCGCCATTACAGGATACAAACTCTCAACTCAATCTTATATATAATATAACTCCAAAATGCGTACCAATTTCATATTCTTCCTGTTGCCATGATTGTTGCTTCAACTTGTACACGCACGTCTGTAATTTTGATTGAATCATTCTTAGCAATAATTAATACCGTAAGAATCAAA

mRNA sequence

TTTATAATTTAACTATAAACCTTTTTTTTTTCTTGTACACCAAAAGTTTTGTGGGCAGAAGTCAAGTTTCCATGAAATGTCCAAGCTGGACAGTTGGCACCACACGATTTACGCCACGTCACAAAGCCAACACACGTGATTGGTCCGAAGATTAGTTGGCGTGGCTTCTTTCCCAACTTCGTCACCCGCTTCCTAAACAGAGAAGCTGAGTTGTCGTTTCATAATGCCACCAAATATTTTAAAAAAAGAAACAAATCCAGTTTTCCCAAGAAAAGACTAGAAATTCCTTTTCAGTTCTTCTCACCGAAAAAAAAAAGAAAAAAGAAAAAAAGAAAAAAACCCCAATCACTAATTGTACCCATGTCAAATCCAGAAGACTCTGCAACGAAGCAAACGGCGCCGTCCGCGCTCCCGACGGTCAATGTCGGAAGGCAATCGCCGCCGCCATCTGCCAATCCGACTCCCGATGTCGAAATGCAAACGCCGGCAGCGACCAGTTCCGGGGTGTCGGAGATCCTGAGCCGGTGGGGGAGGGAAGATCTGCTAAAACGCCGCGTTTTGGCTCTGAGAGGATTTGGTCTCGTCTTTTCGTTGCTTGCTTTCCTTATCATGGCTTGCAATAGACATGGCGATTGGAAAAACTTCGACAAATACGAAGAAATCAGATACGTGTTGGCAATAGCAATTCTGTCCACTTTTTATACGGGCGCCCAAGTTTTTCGACAAATTCATGAAGTTTCAACTGCGATATCCATGTTTCCACCTCGAAAATCTGCCATAATCGACTTCATTGGAGATCAGATTCTGGCTTATCTGCTAATATCGGCGTCATCTTCAGCGATTCCGATGATCAACAGAATGAGAGAAGGCTCAGACAACATATTTACAGACTCATTGGCAGCTTCCATTTCCATGTCCCTTTTCGCCTTCTTGTCTTTAGCTTTGTCGGCCGCCATTACAGGATACAAACTCTCAACTCAATCTTATATATAATATAACTCCAAAATGCGTACCAATTTCATATTCTTCCTGTTGCCATGATTGTTGCTTCAACTTGTACACGCACGTCTGTAATTTTGATTGAATCATTCTTAGCAATAATTAATACCGTAAGAATCAAA

Coding sequence (CDS)

ATGTCAAATCCAGAAGACTCTGCAACGAAGCAAACGGCGCCGTCCGCGCTCCCGACGGTCAATGTCGGAAGGCAATCGCCGCCGCCATCTGCCAATCCGACTCCCGATGTCGAAATGCAAACGCCGGCAGCGACCAGTTCCGGGGTGTCGGAGATCCTGAGCCGGTGGGGGAGGGAAGATCTGCTAAAACGCCGCGTTTTGGCTCTGAGAGGATTTGGTCTCGTCTTTTCGTTGCTTGCTTTCCTTATCATGGCTTGCAATAGACATGGCGATTGGAAAAACTTCGACAAATACGAAGAAATCAGATACGTGTTGGCAATAGCAATTCTGTCCACTTTTTATACGGGCGCCCAAGTTTTTCGACAAATTCATGAAGTTTCAACTGCGATATCCATGTTTCCACCTCGAAAATCTGCCATAATCGACTTCATTGGAGATCAGATTCTGGCTTATCTGCTAATATCGGCGTCATCTTCAGCGATTCCGATGATCAACAGAATGAGAGAAGGCTCAGACAACATATTTACAGACTCATTGGCAGCTTCCATTTCCATGTCCCTTTTCGCCTTCTTGTCTTTAGCTTTGTCGGCCGCCATTACAGGATACAAACTCTCAACTCAATCTTATATATAA

Protein sequence

MSNPEDSATKQTAPSALPTVNVGRQSPPPSANPTPDVEMQTPAATSSGVSEILSRWGREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTGAQVFRQIHEVSTAISMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFTDSLAASISMSLFAFLSLALSAAITGYKLSTQSYI

Homology

[Close]

BLAST of Cp4.1LG08g12550 vs. ExPASy Swiss-Prot
Match: D7LBN4 (CASP-like protein 4B1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_321547 PE=3 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.3e-44
Identity = 101/190 (53.16%), Postives = 128/190 (67.37%), Query Frame = 0


Query: 21  NVGRQSPPPSANPTPDVEMQTPAATSSGVSEILSRWGREDLLKRRVLALRGFGLVFSLLA 80
           N  +Q P    +     E  +    +SG S I  RW REDL+K+     RG  L+FSLLA
Sbjct: 3   NPDKQKPVEVTDVETAAEKTSEPTPASGTSTITQRWKREDLIKKASPITRGICLLFSLLA 62

Query: 81  FLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTGAQVFRQIHEVSTAISMFPPRKSAI 140
           FLIM  N+HG  +NF++YEE RYVLAI+I+ST YT  Q F       +    F  R S +
Sbjct: 63  FLIMVSNKHGYGRNFNEYEEYRYVLAISIISTLYTAWQTFAHF----SKREFFDRRTSTL 122

Query: 141 IDFIGDQILAYLLISASSSAIPMINRMREGSDNIFTDSLAASISMSLFAFLSLALSAAIT 200
           +DF GDQI+AYLLISA+SSAIP+ NR REG DNIFTDS A++ISM++FAF++LALSA  +
Sbjct: 123 VDFSGDQIVAYLLISAASSAIPLTNRFREGQDNIFTDSAASAISMAIFAFVALALSALFS 182

Query: 201 GYKLSTQSYI 211
           GYKLST S+I
Sbjct: 183 GYKLSTHSFI 188

[Close]

BLAST of Cp4.1LG08g12550 vs. ExPASy Swiss-Prot
Match: Q8LE26 (CASP-like protein 4B1 OS=Arabidopsis thaliana OX=3702 GN=At2g38480 PE=2 SV=2)

HSP 1 Score: 174.5 bits (441), Expect = 1.3e-42
Identity = 98/190 (51.58%), Postives = 126/190 (66.32%), Query Frame = 0


Query: 21  NVGRQSPPPSANPTPDVEMQTPAATSSGVSEILSRWGREDLLKRRVLALRGFGLVFSLLA 80
           N     P  + +     E  +    +SG S I  RW REDL+K+     RG  L+FSL+A
Sbjct: 3   NPDNMKPVEATDVESAAEKTSEPTPASGTSTITQRWKREDLIKKASPITRGICLLFSLIA 62

Query: 81  FLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTGAQVFRQIHEVSTAISMFPPRKSAI 140
           FLIM  N+HG  +NF+ YEE RYVLAI+I+ST YT  Q F       +   +F  R S +
Sbjct: 63  FLIMVSNKHGYGRNFNDYEEYRYVLAISIISTLYTAWQTFAHF----SKREIFDRRTSIL 122

Query: 141 IDFIGDQILAYLLISASSSAIPMINRMREGSDNIFTDSLAASISMSLFAFLSLALSAAIT 200
           +DF GDQI+AYLLISA+SSAIP+ N  REG DNIFTDS A++ISM++FAF++LALSA  +
Sbjct: 123 VDFSGDQIVAYLLISAASSAIPLTNIFREGQDNIFTDSAASAISMAIFAFIALALSALFS 182

Query: 201 GYKLSTQSYI 211
           GYKLST S+I
Sbjct: 183 GYKLSTHSFI 188

[Close]

BLAST of Cp4.1LG08g12550 vs. ExPASy Swiss-Prot
Match: Q5W6M3 (CASP-like protein 4B4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0344400 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 7.8e-40
Identity = 97/200 (48.50%), Postives = 130/200 (65.00%), Query Frame = 0


Query: 13  APSALPTVNVGRQSPPPSANPTPDVEMQTPAATSSG-VSEILSRWGREDLLKRRVLALRG 72
           A S  P  +V + +    AN          AA+  G VS ++ RW R+DLL++   ALR 
Sbjct: 7   ASSGAPAADVEKGAAAADANVDGGGAPAAAAASGEGVVSAVVRRWRRQDLLEKSGSALRV 66

Query: 73  FGLVFSLLAFLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTGAQVFRQIHEVS-TAI 132
               FSLLAF++M  N HGDW+ F+ YEE RYV+AI +L+  YT  Q+ R  H V  T  
Sbjct: 67  AAWAFSLLAFVVMGANDHGDWRQFEHYEEYRYVVAIGVLAFIYTTLQLVR--HGVRLTGG 126

Query: 133 SMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFTDSLAASISMSLFAF 192
                + + ++DF GDQ+ AYLL+SA S+AIP+ NRMREG+DN+FTDS AASISM+ FAF
Sbjct: 127 QDLQGKVAVLVDFAGDQVTAYLLMSAVSAAIPITNRMREGADNVFTDSSAASISMAFFAF 186

Query: 193 LSLALSAAITGYKLSTQSYI 211
           L LALSA ++G+KL+ Q+YI
Sbjct: 187 LCLALSALVSGFKLAKQTYI 204

[Close]

BLAST of Cp4.1LG08g12550 vs. ExPASy Swiss-Prot
Match: C5WNF5 (CASP-like protein 4B1 OS=Sorghum bicolor OX=4558 GN=Sb01g038100 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.1e-36
Identity = 86/209 (41.15%), Postives = 129/209 (61.72%), Query Frame = 0


Query: 7   SATKQTAPSALP-TVNVGRQSPPPSANPTPDVEMQTPAATSSG----VSEILSRWGREDL 66
           + T  TA +  P  V     +P   A+ T D      A    G    V  +++RW RED+
Sbjct: 12  ATTAATAAAEKPQDVEKPDYAPYNGASTTADGGTGARARRGDGGGGVVDSVVARWRREDM 71

Query: 67  LKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTGAQVFR 126
           L +  LAL     +F+ +A +++A N+HGDW  FD+Y+E RY+LAIA L+  Y+ AQ  R
Sbjct: 72  LDKSPLALHAAAAIFAFVALVLVASNQHGDWMQFDRYQEYRYLLAIASLALLYSLAQAAR 131

Query: 127 QIHEVSTAISMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFTDSLAA 186
             H +   +       + ++DF+GDQ++AYLL+SA S+A+P+ NRMR    N FTD+ AA
Sbjct: 132 HAHRMRGGVDPVSSASARLLDFVGDQVVAYLLMSALSAAVPITNRMRSAVVNNFTDATAA 191

Query: 187 SISMSLFAFLSLALSAAITGYKLSTQSYI 211
           +ISM+ F+F++LALSA ++GYKLS Q+Y+
Sbjct: 192 AISMAFFSFVALALSAVVSGYKLSKQTYM 220

[Close]

BLAST of Cp4.1LG08g12550 vs. ExPASy Swiss-Prot
Match: F2D276 (CASP-like protein 4B2 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.2e-36
Identity = 85/190 (44.74%), Postives = 118/190 (62.11%), Query Frame = 0


Query: 30  SANPTPDVE--------MQTPAATSSGVSE-ILSRWGREDLLKRRVLALRGFGLVFSLLA 89
           +A   PDVE          T  A   GV E +++RW RED+L +  LAL      F+ +A
Sbjct: 14  AATKQPDVEKDYSSYNGASTAGAGGGGVVESVVARWRREDMLDKCPLALHAAAAAFAFVA 73

Query: 90  FLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTGAQVFRQIHEVSTAISMFPPRKSAI 149
            +++A N+HGDW  FD+Y+E  Y+LAIA L+  Y+ AQ  R  H +       P   + +
Sbjct: 74  LVLVASNQHGDWMQFDRYQEYMYLLAIAALAFAYSLAQALRHAHRMRGGADPIPAPSARL 133

Query: 150 IDFIGDQILAYLLISASSSAIPMINRMREGSDNIFTDSLAASISMSLFAFLSLALSAAIT 209
            DFI DQ++AYLL+SA S+AIP+ NRMR    N FTD+ AA+ISM+  AF++LALSA ++
Sbjct: 134 FDFIADQVVAYLLMSALSAAIPITNRMRTAVINNFTDATAAAISMAFLAFVALALSATVS 193

Query: 210 GYKLSTQSYI 211
           GYKLS Q Y+
Sbjct: 194 GYKLSRQMYM 203

[Close]

BLAST of Cp4.1LG08g12550 vs. NCBI nr
Match: XP_023538779.1 (CASP-like protein 4B1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 397 bits (1020), Expect = 4.61e-139
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSNPEDSATKQTAPSALPTVNVGRQSPPPSANPTPDVEMQTPAATSSGVSEILSRWGRED 60
           MSNPEDSATKQTAPSALPTVNVGRQSPPPSANPTPDVEMQTPAATSSGVSEILSRWGRED
Sbjct: 1   MSNPEDSATKQTAPSALPTVNVGRQSPPPSANPTPDVEMQTPAATSSGVSEILSRWGRED 60

Query: 61  LLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTGAQVF 120
           LLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTGAQVF
Sbjct: 61  LLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTGAQVF 120

Query: 121 RQIHEVSTAISMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFTDSLA 180
           RQIHEVSTAISMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFTDSLA
Sbjct: 121 RQIHEVSTAISMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFTDSLA 180

Query: 181 ASISMSLFAFLSLALSAAITGYKLSTQSYI 210
           ASISMSLFAFLSLALSAAITGYKLSTQSYI
Sbjct: 181 ASISMSLFAFLSLALSAAITGYKLSTQSYI 210

[Close]

BLAST of Cp4.1LG08g12550 vs. NCBI nr
Match: XP_022951298.1 (CASP-like protein 4B1 [Cucurbita moschata])

HSP 1 Score: 372 bits (956), Expect = 3.03e-129
Identity = 200/214 (93.46%), Postives = 202/214 (94.39%), Query Frame = 0


Query: 1   MSNPEDSATKQT----APSALPTVNVGRQSPPPSANPTPDVEMQTPAATSSGVSEILSRW 60
           MSNPEDS TKQ      PS  PTVNVGRQSPPPSANPTPDVEMQTPAATSSGVSEIL+RW
Sbjct: 1   MSNPEDSPTKQKNGAPPPSVPPTVNVGRQSPPPSANPTPDVEMQTPAATSSGVSEILNRW 60

Query: 61  GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTG 120
           GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFD YEE RYVLAIAILSTFYTG
Sbjct: 61  GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDNYEEFRYVLAIAILSTFYTG 120

Query: 121 AQVFRQIHEVSTAISMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT 180
           AQVFRQIHEVSTA SMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT
Sbjct: 121 AQVFRQIHEVSTARSMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT 180

Query: 181 DSLAASISMSLFAFLSLALSAAITGYKLSTQSYI 210
           DSLAASI+MSLFAFLSLALSAAITGYKLSTQSYI
Sbjct: 181 DSLAASITMSLFAFLSLALSAAITGYKLSTQSYI 214

[Close]

BLAST of Cp4.1LG08g12550 vs. NCBI nr
Match: XP_022971522.1 (CASP-like protein 4B1 [Cucurbita maxima])

HSP 1 Score: 371 bits (953), Expect = 8.68e-129
Identity = 200/214 (93.46%), Postives = 202/214 (94.39%), Query Frame = 0


Query: 1   MSNPEDSATKQT----APSALPTVNVGRQSPPPSANPTPDVEMQTPAATSSGVSEILSRW 60
           MSNPEDSATKQ      PSALPTVNV RQSPPPSA+PTPDVEMQ PAATSSGVSEILSRW
Sbjct: 1   MSNPEDSATKQKNGAPPPSALPTVNVERQSPPPSADPTPDVEMQAPAATSSGVSEILSRW 60

Query: 61  GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTG 120
           GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFD YEE RYVLAIAILSTFYTG
Sbjct: 61  GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDNYEEFRYVLAIAILSTFYTG 120

Query: 121 AQVFRQIHEVSTAISMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT 180
           AQVFRQIHEVSTA SMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT
Sbjct: 121 AQVFRQIHEVSTARSMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT 180

Query: 181 DSLAASISMSLFAFLSLALSAAITGYKLSTQSYI 210
           DSLAASI+MSLFAFLSLALSAAITGYK STQSYI
Sbjct: 181 DSLAASITMSLFAFLSLALSAAITGYKFSTQSYI 214

[Close]

BLAST of Cp4.1LG08g12550 vs. NCBI nr
Match: KAG6596321.1 (CASP-like protein 4B1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 369 bits (948), Expect = 5.02e-128
Identity = 199/214 (92.99%), Postives = 201/214 (93.93%), Query Frame = 0


Query: 1   MSNPEDSATKQT----APSALPTVNVGRQSPPPSANPTPDVEMQTPAATSSGVSEILSRW 60
           MSNPEDS TKQ      PS  PTVNV RQSPPPSANPTPDVEMQTPAATSSGVSEIL+RW
Sbjct: 1   MSNPEDSPTKQKNGAPPPSVPPTVNVERQSPPPSANPTPDVEMQTPAATSSGVSEILNRW 60

Query: 61  GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTG 120
           GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFD YEE RYVLAIAILSTFYTG
Sbjct: 61  GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDNYEEFRYVLAIAILSTFYTG 120

Query: 121 AQVFRQIHEVSTAISMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT 180
           AQVFRQIHEVSTA SMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT
Sbjct: 121 AQVFRQIHEVSTARSMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT 180

Query: 181 DSLAASISMSLFAFLSLALSAAITGYKLSTQSYI 210
           DSLAASI+MSLFAFLSLALSAAITGYKLSTQSYI
Sbjct: 181 DSLAASITMSLFAFLSLALSAAITGYKLSTQSYI 214

[Close]

BLAST of Cp4.1LG08g12550 vs. NCBI nr
Match: KAG7027874.1 (CASP-like protein 4B1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 367 bits (941), Expect = 5.85e-127
Identity = 198/214 (92.52%), Postives = 200/214 (93.46%), Query Frame = 0


Query: 1   MSNPEDSATKQT----APSALPTVNVGRQSPPPSANPTPDVEMQTPAATSSGVSEILSRW 60
           MSNPEDS TKQ      PS  PTVNV RQSPPPSANPTPDVEMQTPAATSSGVSEIL+RW
Sbjct: 1   MSNPEDSPTKQKNGAPPPSVPPTVNVERQSPPPSANPTPDVEMQTPAATSSGVSEILNRW 60

Query: 61  GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTG 120
           GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFD YEE RYVLAIAILSTFYTG
Sbjct: 61  GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDNYEEFRYVLAIAILSTFYTG 120

Query: 121 AQVFRQIHEVSTAISMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT 180
           AQVFRQIHEVSTA SMFPP KSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT
Sbjct: 121 AQVFRQIHEVSTARSMFPPPKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT 180

Query: 181 DSLAASISMSLFAFLSLALSAAITGYKLSTQSYI 210
           DSLAASI+MSLFAFLSLALSAAITGYKLSTQSYI
Sbjct: 181 DSLAASITMSLFAFLSLALSAAITGYKLSTQSYI 214

[Close]

BLAST of Cp4.1LG08g12550 vs. ExPASy TrEMBL
Match: A0A6J1GHC2 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111454172 PE=3 SV=1)

HSP 1 Score: 372 bits (956), Expect = 1.47e-129
Identity = 200/214 (93.46%), Postives = 202/214 (94.39%), Query Frame = 0


Query: 1   MSNPEDSATKQT----APSALPTVNVGRQSPPPSANPTPDVEMQTPAATSSGVSEILSRW 60
           MSNPEDS TKQ      PS  PTVNVGRQSPPPSANPTPDVEMQTPAATSSGVSEIL+RW
Sbjct: 1   MSNPEDSPTKQKNGAPPPSVPPTVNVGRQSPPPSANPTPDVEMQTPAATSSGVSEILNRW 60

Query: 61  GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTG 120
           GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFD YEE RYVLAIAILSTFYTG
Sbjct: 61  GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDNYEEFRYVLAIAILSTFYTG 120

Query: 121 AQVFRQIHEVSTAISMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT 180
           AQVFRQIHEVSTA SMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT
Sbjct: 121 AQVFRQIHEVSTARSMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT 180

Query: 181 DSLAASISMSLFAFLSLALSAAITGYKLSTQSYI 210
           DSLAASI+MSLFAFLSLALSAAITGYKLSTQSYI
Sbjct: 181 DSLAASITMSLFAFLSLALSAAITGYKLSTQSYI 214

[Close]

BLAST of Cp4.1LG08g12550 vs. ExPASy TrEMBL
Match: A0A6J1I265 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111470217 PE=3 SV=1)

HSP 1 Score: 371 bits (953), Expect = 4.20e-129
Identity = 200/214 (93.46%), Postives = 202/214 (94.39%), Query Frame = 0


Query: 1   MSNPEDSATKQT----APSALPTVNVGRQSPPPSANPTPDVEMQTPAATSSGVSEILSRW 60
           MSNPEDSATKQ      PSALPTVNV RQSPPPSA+PTPDVEMQ PAATSSGVSEILSRW
Sbjct: 1   MSNPEDSATKQKNGAPPPSALPTVNVERQSPPPSADPTPDVEMQAPAATSSGVSEILSRW 60

Query: 61  GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTG 120
           GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFD YEE RYVLAIAILSTFYTG
Sbjct: 61  GREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDNYEEFRYVLAIAILSTFYTG 120

Query: 121 AQVFRQIHEVSTAISMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT 180
           AQVFRQIHEVSTA SMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT
Sbjct: 121 AQVFRQIHEVSTARSMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFT 180

Query: 181 DSLAASISMSLFAFLSLALSAAITGYKLSTQSYI 210
           DSLAASI+MSLFAFLSLALSAAITGYK STQSYI
Sbjct: 181 DSLAASITMSLFAFLSLALSAAITGYKFSTQSYI 214

[Close]

BLAST of Cp4.1LG08g12550 vs. ExPASy TrEMBL
Match: A0A6J1DT05 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111024030 PE=3 SV=1)

HSP 1 Score: 278 bits (711), Expect = 1.86e-92
Identity = 153/210 (72.86%), Postives = 169/210 (80.48%), Query Frame = 0


Query: 1   MSNPEDSATKQTAPSALPTVNVGRQSPPPSANPTPDVEMQTPAATSSGVSEILSRWGRED 60
           MSNPED+A KQ          V   + PP+A    DVE QT AAT  GVSEI+SRW RED
Sbjct: 1   MSNPEDTAPKQE------NGAVAAATAPPAA----DVESQTTAATGFGVSEIVSRWRRED 60

Query: 61  LLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTGAQVF 120
           LL+RR LALRG GL+ SLLAF++MACN+HGDWK+FDKYEE RY+LAIAILST YTG QV 
Sbjct: 61  LLRRRALALRGCGLILSLLAFVVMACNKHGDWKDFDKYEEFRYLLAIAILSTLYTGVQVS 120

Query: 121 RQIHEVSTAISMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFTDSLA 180
           RQ+ E+ST  SMFP RKSAIIDFIGDQILAYLL+SA+SSAIPM NRMREGSDNIFTDSL 
Sbjct: 121 RQVRELSTGTSMFPLRKSAIIDFIGDQILAYLLMSAASSAIPMTNRMREGSDNIFTDSLV 180

Query: 181 ASISMSLFAFLSLALSAAITGYKLSTQSYI 210
           ASI MS FAF SLA SAAI+GYKLSTQSYI
Sbjct: 181 ASICMSFFAFFSLAFSAAISGYKLSTQSYI 200

[Close]

BLAST of Cp4.1LG08g12550 vs. ExPASy TrEMBL
Match: A0A0A0L9S4 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G730790 PE=3 SV=1)

HSP 1 Score: 260 bits (665), Expect = 1.73e-85
Identity = 142/210 (67.62%), Postives = 163/210 (77.62%), Query Frame = 0


Query: 1   MSNPEDSATKQTAPSALPTVNVGRQSPPPSANPTPDVEMQTPAATSSGVSEILSRWGRED 60
           MSNPEDSA  Q         NV     PPS  P  + + Q+P A+S GVSEI+SRW RED
Sbjct: 1   MSNPEDSAPTQQ--------NVS----PPSTPPAAESKSQSPPASSFGVSEIVSRWRRED 60

Query: 61  LLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTGAQVF 120
           +LKRR LALRGF  +FSLLAF+IMA N+HGDWK+FDKYEE RYVLAI ILST YTGAQV 
Sbjct: 61  VLKRRALALRGFAFIFSLLAFVIMASNKHGDWKDFDKYEEFRYVLAIEILSTLYTGAQVL 120

Query: 121 RQIHEVSTAISMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFTDSLA 180
           RQ HE+ST  S+  P+KS  IDFIGDQ LAYL +SA+SSA+PM NRMREGSD+ FTDSLA
Sbjct: 121 RQFHELSTGKSVILPQKSVFIDFIGDQSLAYLQMSAASSAVPMTNRMREGSDSSFTDSLA 180

Query: 181 ASISMSLFAFLSLALSAAITGYKLSTQSYI 210
           AS++MS FAFLSLALS+ I+GYKLST SYI
Sbjct: 181 ASVTMSFFAFLSLALSSTISGYKLSTHSYI 198

[Close]

BLAST of Cp4.1LG08g12550 vs. ExPASy TrEMBL
Match: A0A5A7TQT0 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005660 PE=3 SV=1)

HSP 1 Score: 260 bits (664), Expect = 2.45e-85
Identity = 141/210 (67.14%), Postives = 162/210 (77.14%), Query Frame = 0


Query: 1   MSNPEDSATKQTAPSALPTVNVGRQSPPPSANPTPDVEMQTPAATSSGVSEILSRWGRED 60
           MSNPEDSA  Q   S  P            A P  D++ Q+ AA+S GVSEI+SRW RED
Sbjct: 1   MSNPEDSAPTQQDVSLPP------------APPAADLKSQSSAASSFGVSEIVSRWRRED 60

Query: 61  LLKRRVLALRGFGLVFSLLAFLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTGAQVF 120
           +LKRR LALRGF  +FSLLAF+IMA N+HGDWK+FDKYEE RYVLAI ILST YTGAQV 
Sbjct: 61  ILKRRALALRGFAFIFSLLAFIIMASNKHGDWKDFDKYEEFRYVLAIEILSTLYTGAQVL 120

Query: 121 RQIHEVSTAISMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINRMREGSDNIFTDSLA 180
           RQ HE+ST  S+F P+KS  IDFIGDQ  AYL +SA+SSA+PM NRMREGSD+ FTDSLA
Sbjct: 121 RQFHELSTGKSVFLPQKSVFIDFIGDQSAAYLQMSAASSAVPMTNRMREGSDSFFTDSLA 180

Query: 181 ASISMSLFAFLSLALSAAITGYKLSTQSYI 210
           AS++MS FAFLSLALS+ I+GYKLST SYI
Sbjct: 181 ASVTMSFFAFLSLALSSIISGYKLSTHSYI 198

[Close]

BLAST of Cp4.1LG08g12550 vs. TAIR 10
Match: AT2G38480.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 174.5 bits (441), Expect = 9.1e-44
Identity = 98/190 (51.58%), Postives = 126/190 (66.32%), Query Frame = 0


Query: 21  NVGRQSPPPSANPTPDVEMQTPAATSSGVSEILSRWGREDLLKRRVLALRGFGLVFSLLA 80
           N     P  + +     E  +    +SG S I  RW REDL+K+     RG  L+FSL+A
Sbjct: 3   NPDNMKPVEATDVESAAEKTSEPTPASGTSTITQRWKREDLIKKASPITRGICLLFSLIA 62

Query: 81  FLIMACNRHGDWKNFDKYEEIRYVLAIAILSTFYTGAQVFRQIHEVSTAISMFPPRKSAI 140
           FLIM  N+HG  +NF+ YEE RYVLAI+I+ST YT  Q F       +   +F  R S +
Sbjct: 63  FLIMVSNKHGYGRNFNDYEEYRYVLAISIISTLYTAWQTFAHF----SKREIFDRRTSIL 122

Query: 141 IDFIGDQILAYLLISASSSAIPMINRMREGSDNIFTDSLAASISMSLFAFLSLALSAAIT 200
           +DF GDQI+AYLLISA+SSAIP+ N  REG DNIFTDS A++ISM++FAF++LALSA  +
Sbjct: 123 VDFSGDQIVAYLLISAASSAIPLTNIFREGQDNIFTDSAASAISMAIFAFIALALSALFS 182

Query: 201 GYKLSTQSYI 211
           GYKLST S+I
Sbjct: 183 GYKLSTHSFI 188

[Close]

BLAST of Cp4.1LG08g12550 vs. TAIR 10
Match: AT2G36330.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 90.1 bits (222), Expect = 2.3e-18
Identity = 56/165 (33.94%), Postives = 95/165 (57.58%), Query Frame = 0


Query: 46  SSGVSEILSRWGREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWK--NFDKYEEIRY 105
           S  VS IL R  RE+++K   L  R   +V +L++F IMA ++   W   +FD+Y+E R+
Sbjct: 116 SGAVSAILRRSRREEVVKFSALGFRLSEVVLALISFSIMAADKTKGWSGDSFDRYKEYRF 175

Query: 106 VLAIAILSTFYTGAQVFRQIHEVSTAISMFPPRKSAIIDFIGDQILAYLLISASSSAIPM 165
            L++ +++  Y+  Q     + +     +       + +FI DQ+LAYLL+SAS++A+  
Sbjct: 176 CLSVNVVAFVYSSFQACDLAYHLVKEKHLISHHLRPLFEFIIDQVLAYLLMSASTAAVTR 235

Query: 166 INR-MREGSDNIFTDSLAASISMSLFAFLSLALSAAITGYKLSTQ 208
           ++  +     + FT+  +ASI+MS  AFL+ A S+ I+GY L  Q
Sbjct: 236 VDDWVSNWGKDEFTEMASASIAMSFLAFLAFAFSSLISGYNLFNQ 280

[Close]

BLAST of Cp4.1LG08g12550 vs. TAIR 10
Match: AT4G11655.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 75.5 bits (184), Expect = 5.8e-14
Identity = 56/177 (31.64%), Postives = 88/177 (49.72%), Query Frame = 0


Query: 37  VEMQTPAATSSGVSEILSRW-GREDLLKRRVLALRGFGLVFSLLAFLIMACN------RH 96
           V  QTP+  +  V+   SR+  R   +    L LR   +V   ++ L +A N      RH
Sbjct: 26  VSQQTPSLFAYSVTPSASRFSSRRASVHVIGLVLRFITMVLCFVSALSLAVNVQRPSKRH 85

Query: 97  --GDWKNFDKYEEIRYVLAIAILSTFYTGAQVFRQIHEVSTAISMFPPRKSAIIDFIGDQ 156
              +  +F  Y E+ Y   +A++   YT  Q F+ + +++    +     S  I FI DQ
Sbjct: 86  LTQNSSSFASYPELLYCFGVAVIGFVYTSLQTFKGVCDITHRGVLISEPLSDYISFIFDQ 145

Query: 157 ILAYLLISASSSAIPMINRMREGSDNIFTDSLAASISMSLFAFLSLALSAAITGYKL 205
           ++ YLL+S+SS AI  I  + E +     ++   S+SMS  AFL L LS  ++GYKL
Sbjct: 146 VICYLLVSSSSVAIAWIQHINEDAIKTLRNNSIVSVSMSFSAFLVLTLSGLLSGYKL 202

[Close]

BLAST of Cp4.1LG08g12550 vs. TAIR 10
Match: AT5G62820.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-11
Identity = 46/153 (30.07%), Postives = 81/153 (52.94%), Query Frame = 0


Query: 59  EDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDWK--NFDKYEEIRYVLAIAILSTFYTG 118
           +DL+    L  R   ++  +++F IMA ++   W   ++D+Y+E RY LA+ +++  Y+ 
Sbjct: 143 DDLVSLTALGFRITEVILCVISFSIMAADKTQGWSGDSYDRYKEYRYCLAVNVIAFVYSA 202

Query: 119 AQVFRQIHEVSTAISMFPPRKSAIIDFIGDQILAYLLISASSSAIPMINR-MREGSDNIF 178
            +       ++    M       +  F  DQ+LAYLL+SASS A   ++  +     + F
Sbjct: 203 FEACDAACYIAKESYMINCGFHDLFVFSMDQLLAYLLMSASSCAATRVDDWVSNWGKDEF 262

Query: 179 TDSLAASISMSLFAFLSLALSAAITGYKLSTQS 209
           T    ASI++S  AF + A+SA I+ Y+L T +
Sbjct: 263 TQMATASIAVSFLAFGAFAVSALISSYRLFTHA 295

[Close]

BLAST of Cp4.1LG08g12550 vs. TAIR 10
Match: AT5G40300.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 66.2 bits (160), Expect = 3.5e-11
Identity = 59/223 (26.46%), Postives = 106/223 (47.53%), Query Frame = 0


Query: 1   MSNPEDSATKQTAPSA--------LPTVNVGRQSPP-------PSANPTPDVEMQTPAAT 60
           + +P DS T  + P +        +PT +V +   P            +       P+ +
Sbjct: 45  IESPPDSPTLSSIPDSHGSSPHTIIPTPSVAKTETPFRVTNGEEEKKVSESRRQLRPSFS 104

Query: 61  SSGVSEILSRWGREDLLKRRVLALRGFGLVFSLLAFLIMACNRHGDW--KNFDKYEEIRY 120
           SS  +   S+W    L+++ +L  R    V  L++F +M  +R   W   +F  Y+E R+
Sbjct: 105 SSSSTPRESKWA--SLIRKALLGFRVIAFVSCLVSFSVMVSDRDKGWAHDSFYNYKEFRF 164

Query: 121 VLAIAILSTFYTGAQVFRQIHEVSTAISMFPPRKSAIIDFIGDQILAYLLISASSSAIPM 180
            LA  ++   Y+G  +   ++ +ST+I          ++F  DQ+LAYLL SAS+SA   
Sbjct: 165 CLAANVIGFVYSGFMICDLVYLLSTSIRRSRHNLRHFLEFGLDQMLAYLLASASTSASIR 224

Query: 181 INRMRE--GSDNIFTDSLAASISMSLFAFLSLALSAAITGYKL 205
           ++  +   G+D  F D   AS+++S  +F++ A  +  +GY L
Sbjct: 225 VDDWQSNWGADK-FPDLARASVALSYVSFVAFAFCSLASGYAL 264

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g12550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
D7LBN4	2.3e-44	53.16	CASP-like protein 4B1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]
Q8LE26	1.3e-42	51.58	CASP-like protein 4B1 OS=Arabidopsis thaliana OX=3702 GN=At2g38480 PE=2 SV=2	[more]
Q5W6M3	7.8e-40	48.50	CASP-like protein 4B4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0344400 P...	[more]
C5WNF5	3.1e-36	41.15	CASP-like protein 4B1 OS=Sorghum bicolor OX=4558 GN=Sb01g038100 PE=2 SV=1	[more]
F2D276	5.2e-36	44.74	CASP-like protein 4B2 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1	[more]

BLAST of Cp4.1LG08g12550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538779.1	4.61e-139	100.00	CASP-like protein 4B1 [Cucurbita pepo subsp. pepo]	[more]
XP_022951298.1	3.03e-129	93.46	CASP-like protein 4B1 [Cucurbita moschata]	[more]
XP_022971522.1	8.68e-129	93.46	CASP-like protein 4B1 [Cucurbita maxima]	[more]
KAG6596321.1	5.02e-128	92.99	CASP-like protein 4B1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7027874.1	5.85e-127	92.52	CASP-like protein 4B1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG08g12550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GHC2	1.47e-129	93.46	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111454172 PE=3 SV=1	[more]
A0A6J1I265	4.20e-129	93.46	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111470217 PE=3 SV=1	[more]
A0A6J1DT05	1.86e-92	72.86	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111024030 PE=3 SV=1	[more]
A0A0A0L9S4	1.73e-85	67.62	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G730790 PE=3 SV=1	[more]
A0A5A7TQT0	2.45e-85	67.14	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00...	[more]

BLAST of Cp4.1LG08g12550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38480.1	9.1e-44	51.58	Uncharacterised protein family (UPF0497)	[more]
AT2G36330.1	2.3e-18	33.94	Uncharacterised protein family (UPF0497)	[more]
AT4G11655.1	5.8e-14	31.64	Uncharacterised protein family (UPF0497)	[more]
AT5G62820.1	1.6e-11	30.07	Uncharacterised protein family (UPF0497)	[more]
AT5G40300.1	3.5e-11	26.46	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 65..191 e-value: 5.3E-24 score: 84.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR11615:SF144	CASP-LIKE PROTEIN 4B1	coord: 33..209
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 33..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g12550.1	Cp4.1LG08g12550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding