Cp4.1LG08g12260 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g12260
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	trihelix transcription factor GT-3b
Location	Cp4.1LG08: 8927691 .. 8929106 (+)
RNA-Seq Expression	Cp4.1LG08g12260
Synteny	Cp4.1LG08g12260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACACCAACCCACATATTAAAAATATTTCCATTTCATTTTCTTTCCTCCAACGACGATTCTTTTCTTTTTTTTTTCCTTTTTTTTTTCTATATAATTTTCTCAAGTTTTTGGTACTCATGGAAGGCCACAATCCCCATCCCCTTGTTCATCTCCACCTTCAGCAGCAACAACATCAACAGCTTCAACATCCTCCGCCGCCACCGCCGCCGCAGCAGCAGCAGCATCTCCACCAAAACCTCGCCGATCAAACCGCCGTCAACGCCGTCGCCGACAGATTCCCTCAATGGAGTATTCAAGAAACAAAGGAGTTTTTAATGATCCGCGCCGAGCTGGATCAACGGTTCATGGAGACCAAACGCAACAAACTCTTGTGGGAAATCACCGCCGCCAAAATGAAAGAAAAGGGTTTCAATCGCAGCGCTGAACAGTGTAAATGTAAATGGAAAAACCTCGTCACCCGTTACAAGGTACTAAATTTCCCTTCTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCTTTATTACAAAACAATATTTGAAATTTTGTGGGATTTAAGGGAAAATTGATGGGTTGATTGTATTTTATGTAATTGAACAAATTAAGGGTTGTGAAACAATGGAGCCAGAAATTTCAAGGCAGCAATTTCCATTCTACACAGAGCTACAAGCAATTTTCGGGGCACGAATGCATAGAATATTATGGGCGGAGGCGGAGAGCGGAGGGAGTGGATCGAAGAAGAAGACGACGGTGTTATCGTCCGATGAAGATGACGAGAACGAGGACAGTGACGGGGACGGAGGCGACACGAAAGCGAGCGGTAGGAAGAGTAAAAGGAAGGGTAAAGGTAACGGCGGGGGAAGCAGTAGTATCAATCATTTGAAGGAAATTTTAGAAGATTTCATGAACCAACAAATTCAAATGGAGATTCAATGGAGGGAAGCGTTTGAATCAAGGGAAAAAGAGAGACAAATTAGGGAAATGGAATGGAGAAGGAAAATGGAAGCTTTAGAACATGAGAGGATAATGTTGGAAAGAAGATGGAGAGAAAGGGAAGAACAAAGAAGAATGAGAGATGAAGTTAGGGCTGAGAAAAGAGATGCTTTAATCACAGCTTTGTTAAACAAGCTTAGAAGAGATGATCATATATAGTATTCGTTATCGTATATCTTTGCATCAATATCAATCTCTTCGTTCATCTTCGTTCATCATATTCGAACTTAACTACTCGAATGGACAAATATCAACCTTTTTACCATAAATTTTCATATATTTATTCGGGTTTAGTTCTAATCATTTCCGATCAAAGCTTTTCTTTCTGGGTCTTTGACATTGATTATTGTTATGCAAGCTATCAAACCCTACCATGTATTTATATTATATTTTGTG

mRNA sequence

TCACACCAACCCACATATTAAAAATATTTCCATTTCATTTTCTTTCCTCCAACGACGATTCTTTTCTTTTTTTTTTCCTTTTTTTTTTCTATATAATTTTCTCAAGTTTTTGGTACTCATGGAAGGCCACAATCCCCATCCCCTTGTTCATCTCCACCTTCAGCAGCAACAACATCAACAGCTTCAACATCCTCCGCCGCCACCGCCGCCGCAGCAGCAGCAGCATCTCCACCAAAACCTCGCCGATCAAACCGCCGTCAACGCCGTCGCCGACAGATTCCCTCAATGGAGTATTCAAGAAACAAAGGAGTTTTTAATGATCCGCGCCGAGCTGGATCAACGGTTCATGGAGACCAAACGCAACAAACTCTTGTGGGAAATCACCGCCGCCAAAATGAAAGAAAAGGGTTTCAATCGCAGCGCTGAACAGTGTAAATGTAAATGGAAAAACCTCGTCACCCGTTACAAGGGTTGTGAAACAATGGAGCCAGAAATTTCAAGGCAGCAATTTCCATTCTACACAGAGCTACAAGCAATTTTCGGGGCACGAATGCATAGAATATTATGGGCGGAGGCGGAGAGCGGAGGGAGTGGATCGAAGAAGAAGACGACGGTGTTATCGTCCGATGAAGATGACGAGAACGAGGACAGTGACGGGGACGGAGGCGACACGAAAGCGAGCGGTAGGAAGAGTAAAAGGAAGGGTAAAGGTAACGGCGGGGGAAGCAGTAGTATCAATCATTTGAAGGAAATTTTAGAAGATTTCATGAACCAACAAATTCAAATGGAGATTCAATGGAGGGAAGCGTTTGAATCAAGGGAAAAAGAGAGACAAATTAGGGAAATGGAATGGAGAAGGAAAATGGAAGCTTTAGAACATGAGAGGATAATGTTGGAAAGAAGATGGAGAGAAAGGGAAGAACAAAGAAGAATGAGAGATGAAGTTAGGGCTGAGAAAAGAGATGCTTTAATCACAGCTTTGTTAAACAAGCTTAGAAGAGATGATCATATATAGTATTCGTTATCGTATATCTTTGCATCAATATCAATCTCTTCGTTCATCTTCGTTCATCATATTCGAACTTAACTACTCGAATGGACAAATATCAACCTTTTTACCATAAATTTTCATATATTTATTCGGGTTTAGTTCTAATCATTTCCGATCAAAGCTTTTCTTTCTGGGTCTTTGACATTGATTATTGTTATGCAAGCTATCAAACCCTACCATGTATTTATATTATATTTTGTG

Coding sequence (CDS)

ATGGAAGGCCACAATCCCCATCCCCTTGTTCATCTCCACCTTCAGCAGCAACAACATCAACAGCTTCAACATCCTCCGCCGCCACCGCCGCCGCAGCAGCAGCAGCATCTCCACCAAAACCTCGCCGATCAAACCGCCGTCAACGCCGTCGCCGACAGATTCCCTCAATGGAGTATTCAAGAAACAAAGGAGTTTTTAATGATCCGCGCCGAGCTGGATCAACGGTTCATGGAGACCAAACGCAACAAACTCTTGTGGGAAATCACCGCCGCCAAAATGAAAGAAAAGGGTTTCAATCGCAGCGCTGAACAGTGTAAATGTAAATGGAAAAACCTCGTCACCCGTTACAAGGGTTGTGAAACAATGGAGCCAGAAATTTCAAGGCAGCAATTTCCATTCTACACAGAGCTACAAGCAATTTTCGGGGCACGAATGCATAGAATATTATGGGCGGAGGCGGAGAGCGGAGGGAGTGGATCGAAGAAGAAGACGACGGTGTTATCGTCCGATGAAGATGACGAGAACGAGGACAGTGACGGGGACGGAGGCGACACGAAAGCGAGCGGTAGGAAGAGTAAAAGGAAGGGTAAAGGTAACGGCGGGGGAAGCAGTAGTATCAATCATTTGAAGGAAATTTTAGAAGATTTCATGAACCAACAAATTCAAATGGAGATTCAATGGAGGGAAGCGTTTGAATCAAGGGAAAAAGAGAGACAAATTAGGGAAATGGAATGGAGAAGGAAAATGGAAGCTTTAGAACATGAGAGGATAATGTTGGAAAGAAGATGGAGAGAAAGGGAAGAACAAAGAAGAATGAGAGATGAAGTTAGGGCTGAGAAAAGAGATGCTTTAATCACAGCTTTGTTAAACAAGCTTAGAAGAGATGATCATATATAG

Protein sequence

MEGHNPHPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQWSIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDSDGDGGDTKASGRKSKRKGKGNGGGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKERQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDHI

Homology

[Close]

BLAST of Cp4.1LG08g12260 vs. ExPASy Swiss-Prot
Match: O80450 (Trihelix transcription factor GT-3b OS=Arabidopsis thaliana OX=3702 GN=GT-3B PE=1 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 9.2e-71
Identity = 161/301 (53.49%), Postives = 201/301 (66.78%), Query Frame = 0


Query: 1   MEGHNPHPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQWSIQ 60
           M+GH  H     HL Q Q+    H           H      +  +  AV DRFPQWS++
Sbjct: 1   MDGHQHH-----HLHQLQYLNKHH----------LHTQSQTPEIASPVAVGDRFPQWSVE 60

Query: 61  ETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCE 120
           ETKE + IR ELDQ FMETKRNKLLWE+ + KM++K F RS EQCKCKWKNLVTR+KGCE
Sbjct: 61  ETKELIGIRGELDQTFMETKRNKLLWEVISNKMRDKSFPRSPEQCKCKWKNLVTRFKGCE 120

Query: 121 TMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSK--KKTTVLSSDEDDE--NE 180
           TME E +RQQFPFY ++Q IF  RM R+LWAE+E GG G+    +    SSDE++E  NE
Sbjct: 121 TMEAETARQQFPFYDDMQNIFTTRMQRMLWAESEGGGGGTSGAARKREYSSDEEEENVNE 180

Query: 181 DSDGDGGDTKASGRKSK--RKGKGNGGGSSSINHLKEILEDFMNQQIQMEIQWREAFESR 240
           +      D K    K    +K KG    S+S N ++E+LE+FM  Q++ME +WRE +E+R
Sbjct: 181 ELVDVSNDPKILNPKKNIAKKRKGGSNSSNSNNGVREVLEEFMRHQVRMESEWREGWEAR 240

Query: 241 EKERQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRR 296
           EKER  +E EWRRKME LE ER+ +ER WR+REEQRR R+E+RAEKRD+LI ALL KL R
Sbjct: 241 EKERAEKEEEWRRKMEELEKERLAMERMWRDREEQRRSREEMRAEKRDSLINALLAKLTR 286

[Close]

BLAST of Cp4.1LG08g12260 vs. ExPASy Swiss-Prot
Match: Q9SDW0 (Trihelix transcription factor GT-3a OS=Arabidopsis thaliana OX=3702 GN=GT-3A PE=1 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 6.2e-67
Identity = 161/318 (50.63%), Postives = 198/318 (62.26%), Query Frame = 0


Query: 1   MEGHNPHPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQWSIQ 60
           M+  NP    H H Q   H   Q   PPPP      +     D        +R PQWSI+
Sbjct: 1   MDRRNPFQHHHHHHQLHHHLIQQQQLPPPPLSTTATM-----DPGGGGGGGERIPQWSIE 60

Query: 61  ETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCE 120
           ETKE L IR ELDQ FMETKRNKLLWE+ AAKM +KGF RSAEQCK KWKNLVTRYK CE
Sbjct: 61  ETKELLAIREELDQTFMETKRNKLLWEVVAAKMADKGFVRSAEQCKSKWKNLVTRYKACE 120

Query: 121 TMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDSDG 180
           T EP+  RQQFPFY E+Q+IF ARM R+LW+EA    + SK+K    SSD+++E  D   
Sbjct: 121 TTEPDAIRQQFPFYNEIQSIFEARMQRMLWSEATEPSTSSKRKHHQFSSDDEEEEVDEPN 180

Query: 181 DG--------------------GDTKASGRKSKRKGKGNGGGS---SSINHLKEILEDFM 240
                                   T  + RK  +KGKG   G+   ++ N LK+ILE+FM
Sbjct: 181 QDINEELLSLVETQKRETEVITTSTSTNPRKRAKKGKGVASGTKAETAGNTLKDILEEFM 240

Query: 241 NQQIQMEIQWREAFESREKERQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVR 296
            Q ++ME +WR+A+E +E ER+ RE EWRR+M  LE ER   ERRW EREE+RR+R+E R
Sbjct: 241 RQTVKMEKEWRDAWEMKEIEREKREKEWRRRMAELEEERAATERRWMEREEERRLREEAR 300

[Close]

BLAST of Cp4.1LG08g12260 vs. ExPASy Swiss-Prot
Match: Q9FX53 (Trihelix transcription factor GT-1 OS=Arabidopsis thaliana OX=3702 GN=GT-1 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.7e-11
Identity = 45/148 (30.41%), Postives = 71/148 (47.97%), Query Frame = 0


Query: 1   MEGHNPHPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQWSIQ 60
           ++ H+ H   + HL Q Q            PQQQ  L ++  +   V A   R   W   
Sbjct: 43  LQSHHHHNHHNHHLHQSQ------------PQQQILLGESSGEDHEVKAPKKRAETWVQD 102

Query: 61  ETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCE 120
           ET+  +M R  +D  F  +K NK LWE  ++KM+EKGF+RS   C  KW+NL+  +K  +
Sbjct: 103 ETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKAK 162

Query: 121 TMEPEISRQQFPFYTELQAIFGARMHRI 149
             +      +  +Y E++ I   R  ++
Sbjct: 163 HHDRGNGSAKMSYYKEIEDILRERSKKV 178

[Close]

BLAST of Cp4.1LG08g12260 vs. ExPASy Swiss-Prot
Match: Q9LU92 (Trihelix transcription factor GT-4 OS=Arabidopsis thaliana OX=3702 GN=GT-4 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.1e-10
Identity = 43/151 (28.48%), Postives = 74/151 (49.01%), Query Frame = 0


Query: 43  DQTAVNAVADRFPQWSIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSA 102
           D   + A   R   W+  ET+  + +R E+D  F  +K NK LWE  + KM+EKGF+RS 
Sbjct: 41  DHEIIKAPKKRAETWAQDETRTLISLRREMDNLFNTSKSNKHLWEQISKKMREKGFDRSP 100

Query: 103 EQCKCKWKNLVTRYKGCETMEPEIS---RQQFPFYTELQAIFGARMHRILWAEAESGGSG 162
             C  KW+N++  +K  +  E + +     +  +Y E++ IF  R  ++ + ++ +  + 
Sbjct: 101 SMCTDKWRNILKEFKKAKQHEDKATSGGSTKMSYYNEIEDIFRERKKKVAFYKSPATTTP 160

Query: 163 SKKKTTVLSSDEDDENEDSDGDGGDTKASGR 191
           S  K        D   ED+       +A+GR
Sbjct: 161 SSAKVDSFMQFTDKGFEDTGISFTSVEANGR 191

[Close]

BLAST of Cp4.1LG08g12260 vs. ExPASy Swiss-Prot
Match: Q9C882 (Trihelix transcription factor GTL1 OS=Arabidopsis thaliana OX=3702 GN=GTL1 PE=1 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 6.8e-05
Identity = 49/180 (27.22%), Postives = 80/180 (44.44%), Query Frame = 0


Query: 8   PLVHLHLQQQQ------HQQLQHPPPPPPP---QQQQHLHQNLADQTAVNAVADRFP--- 67
           PL     Q QQ       QQ+  PPPP  P   Q +Q   Q    +  +++     P   
Sbjct: 375 PLSTAQSQSQQPIMAIPQQQILPPPPPSHPHAHQPEQKQQQQPQQEMVMSSEQSSLPSSS 434

Query: 68  QWSIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTR 127
           +W   E    + +R+ ++ R+ +     LLWE  +  MK  G+NR+A++CK KW+N+   
Sbjct: 435 RWPKAEILALINLRSGMEPRYQDNVPKGLLWEEISTSMKRMGYNRNAKRCKEKWENINKY 494

Query: 128 YKGCETMEPEISRQQ----FPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDE 172
           YK  +  E    R Q     P++  L  ++    +++L       GSG    T+ L  D+
Sbjct: 495 YK--KVKESNKKRPQDAKTCPYFHRLDLLY---RNKVL-------GSGGGSSTSGLPQDQ 542

[Close]

BLAST of Cp4.1LG08g12260 vs. NCBI nr
Match: XP_023540206.1 (trihelix transcription factor GT-3b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 571 bits (1471), Expect = 7.14e-205
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MEGHNPHPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQWSIQ 60
           MEGHNPHPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQWSIQ
Sbjct: 1   MEGHNPHPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQWSIQ 60

Query: 61  ETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCE 120
           ETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCE
Sbjct: 61  ETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCE 120

Query: 121 TMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDSDG 180
           TMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDSDG
Sbjct: 121 TMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDSDG 180

Query: 181 DGGDTKASGRKSKRKGKGNGGGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKERQI 240
           DGGDTKASGRKSKRKGKGNGGGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKERQI
Sbjct: 181 DGGDTKASGRKSKRKGKGNGGGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKERQI 240

Query: 241 REMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDHI 298
           REMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDHI
Sbjct: 241 REMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDHI 298

[Close]

BLAST of Cp4.1LG08g12260 vs. NCBI nr
Match: KAG7027894.1 (Trihelix transcription factor GT-3a, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 558 bits (1439), Expect = 5.19e-200
Identity = 294/298 (98.66%), Postives = 295/298 (98.99%), Query Frame = 0


Query: 1   MEGHNPHPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQWSIQ 60
           MEGHNPHPLVHLHLQQQQ QQLQHPPPPPPPQ QQHLHQNLADQTAVNAVADRFPQWSIQ
Sbjct: 1   MEGHNPHPLVHLHLQQQQQQQLQHPPPPPPPQ-QQHLHQNLADQTAVNAVADRFPQWSIQ 60

Query: 61  ETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCE 120
           ETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCE
Sbjct: 61  ETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCE 120

Query: 121 TMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDSDG 180
           TMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDSDG
Sbjct: 121 TMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDSDG 180

Query: 181 DGGDTKASGRKSKRKGKGNGGGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKERQI 240
           DGGDTKASGRKSK+KGKGN GGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKERQI
Sbjct: 181 DGGDTKASGRKSKKKGKGNAGGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKERQI 240

Query: 241 REMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDHI 298
           REMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDHI
Sbjct: 241 REMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDHI 297

[Close]

BLAST of Cp4.1LG08g12260 vs. NCBI nr
Match: KAG6596342.1 (Trihelix transcription factor GT-3a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 558 bits (1437), Expect = 1.05e-199
Identity = 294/298 (98.66%), Postives = 295/298 (98.99%), Query Frame = 0


Query: 1   MEGHNPHPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQWSIQ 60
           MEGHNPHPLVHLHLQQQQ QQLQHPPPPPPPQ QQHLHQNLADQTAVNAVADRFPQWSIQ
Sbjct: 1   MEGHNPHPLVHLHLQQQQQQQLQHPPPPPPPQ-QQHLHQNLADQTAVNAVADRFPQWSIQ 60

Query: 61  ETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCE 120
           ETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCE
Sbjct: 61  ETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCE 120

Query: 121 TMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDSDG 180
           TMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDSDG
Sbjct: 121 TMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDSDG 180

Query: 181 DGGDTKASGRKSKRKGKGNGGGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKERQI 240
           DGGDTKASGRKSK+KGKGN GGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKERQI
Sbjct: 181 DGGDTKASGRKSKKKGKGNTGGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKERQI 240

Query: 241 REMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDHI 298
           REMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDHI
Sbjct: 241 REMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDHI 297

[Close]

BLAST of Cp4.1LG08g12260 vs. NCBI nr
Match: XP_022963584.1 (trihelix transcription factor GT-3b [Cucurbita moschata])

HSP 1 Score: 553 bits (1426), Expect = 5.35e-198
Identity = 294/300 (98.00%), Postives = 295/300 (98.33%), Query Frame = 0


Query: 1   MEGHNPHPLVHLHLQQQQHQQ--LQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQWS 60
           MEGHNPHPLVHLHLQQQQ QQ  LQHPPPPPPPQ QQHLHQNLADQTAVNAVADRFPQWS
Sbjct: 1   MEGHNPHPLVHLHLQQQQQQQQQLQHPPPPPPPQ-QQHLHQNLADQTAVNAVADRFPQWS 60

Query: 61  IQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKG 120
           IQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKG
Sbjct: 61  IQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKG 120

Query: 121 CETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDS 180
           CETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDS
Sbjct: 121 CETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDS 180

Query: 181 DGDGGDTKASGRKSKRKGKGNGGGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKER 240
           DGDGGDTKASGRKSK+KGKGN GGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKER
Sbjct: 181 DGDGGDTKASGRKSKKKGKGNAGGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKER 240

Query: 241 QIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDHI 298
           QIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDHI
Sbjct: 241 QIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDHI 299

[Close]

BLAST of Cp4.1LG08g12260 vs. NCBI nr
Match: XP_022971581.1 (trihelix transcription factor GT-3b-like [Cucurbita maxima])

HSP 1 Score: 546 bits (1406), Expect = 6.21e-195
Identity = 289/301 (96.01%), Postives = 293/301 (97.34%), Query Frame = 0


Query: 1   MEGHNPHPLVHLHLQQQQHQQ---LQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQW 60
           MEGHNPHPLVHLHLQQQQ QQ   LQHPPPPPPPQ QQHLHQNLADQTAVNAV DRFPQW
Sbjct: 1   MEGHNPHPLVHLHLQQQQQQQQQQLQHPPPPPPPQ-QQHLHQNLADQTAVNAVTDRFPQW 60

Query: 61  SIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYK 120
           SIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYK
Sbjct: 61  SIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYK 120

Query: 121 GCETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENED 180
           GCETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENED
Sbjct: 121 GCETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENED 180

Query: 181 SDGDGGDTKASGRKSKRKGKGNGGGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKE 240
           SDGDGGDTKASGRKSK+KGKGNGGGSSSINHLKEILEDF+NQQIQMEIQW+EAFE+REKE
Sbjct: 181 SDGDGGDTKASGRKSKKKGKGNGGGSSSINHLKEILEDFINQQIQMEIQWKEAFEAREKE 240

Query: 241 RQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDH 298
           RQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRD LITALLNKL RDDH
Sbjct: 241 RQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDGLITALLNKLGRDDH 300

[Close]

BLAST of Cp4.1LG08g12260 vs. ExPASy TrEMBL
Match: A0A6J1HKL6 (trihelix transcription factor GT-3b OS=Cucurbita moschata OX=3662 GN=LOC111463850 PE=4 SV=1)

HSP 1 Score: 553 bits (1426), Expect = 2.59e-198
Identity = 294/300 (98.00%), Postives = 295/300 (98.33%), Query Frame = 0


Query: 1   MEGHNPHPLVHLHLQQQQHQQ--LQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQWS 60
           MEGHNPHPLVHLHLQQQQ QQ  LQHPPPPPPPQ QQHLHQNLADQTAVNAVADRFPQWS
Sbjct: 1   MEGHNPHPLVHLHLQQQQQQQQQLQHPPPPPPPQ-QQHLHQNLADQTAVNAVADRFPQWS 60

Query: 61  IQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKG 120
           IQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKG
Sbjct: 61  IQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKG 120

Query: 121 CETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDS 180
           CETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDS
Sbjct: 121 CETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDS 180

Query: 181 DGDGGDTKASGRKSKRKGKGNGGGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKER 240
           DGDGGDTKASGRKSK+KGKGN GGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKER
Sbjct: 181 DGDGGDTKASGRKSKKKGKGNAGGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKER 240

Query: 241 QIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDHI 298
           QIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDHI
Sbjct: 241 QIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDHI 299

[Close]

BLAST of Cp4.1LG08g12260 vs. ExPASy TrEMBL
Match: A0A6J1I3N7 (trihelix transcription factor GT-3b-like OS=Cucurbita maxima OX=3661 GN=LOC111470254 PE=4 SV=1)

HSP 1 Score: 546 bits (1406), Expect = 3.00e-195
Identity = 289/301 (96.01%), Postives = 293/301 (97.34%), Query Frame = 0


Query: 1   MEGHNPHPLVHLHLQQQQHQQ---LQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQW 60
           MEGHNPHPLVHLHLQQQQ QQ   LQHPPPPPPPQ QQHLHQNLADQTAVNAV DRFPQW
Sbjct: 1   MEGHNPHPLVHLHLQQQQQQQQQQLQHPPPPPPPQ-QQHLHQNLADQTAVNAVTDRFPQW 60

Query: 61  SIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYK 120
           SIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYK
Sbjct: 61  SIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYK 120

Query: 121 GCETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENED 180
           GCETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENED
Sbjct: 121 GCETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENED 180

Query: 181 SDGDGGDTKASGRKSKRKGKGNGGGSSSINHLKEILEDFMNQQIQMEIQWREAFESREKE 240
           SDGDGGDTKASGRKSK+KGKGNGGGSSSINHLKEILEDF+NQQIQMEIQW+EAFE+REKE
Sbjct: 181 SDGDGGDTKASGRKSKKKGKGNGGGSSSINHLKEILEDFINQQIQMEIQWKEAFEAREKE 240

Query: 241 RQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRRDDH 298
           RQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRD LITALLNKL RDDH
Sbjct: 241 RQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDGLITALLNKLGRDDH 300

[Close]

BLAST of Cp4.1LG08g12260 vs. ExPASy TrEMBL
Match: A0A0A0LF98 (Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G731130 PE=4 SV=1)

HSP 1 Score: 453 bits (1166), Expect = 1.39e-158
Identity = 250/316 (79.11%), Postives = 269/316 (85.13%), Query Frame = 0


Query: 1   MEGHN-----------PHPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNLA-DQ-TAV 60
           MEGH+           PHPL+HLH QQQ    +QHPPPPPP     HLHQ+LA DQ T  
Sbjct: 1   MEGHHHPHPHPHPHPHPHPLLHLHQQQQ----IQHPPPPPP-----HLHQSLAVDQATTA 60

Query: 61  NAVADRFPQWSIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKC 120
            A+ADRFPQWSIQETKEFLMIRAELDQ FMETKRNKLLWEITA+KMKEKGFNRSAEQCKC
Sbjct: 61  TAIADRFPQWSIQETKEFLMIRAELDQTFMETKRNKLLWEITASKMKEKGFNRSAEQCKC 120

Query: 121 KWKNLVTRYKGCETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVL 180
           KWKNLVTRYKGCETMEPEISRQQFPFYTELQAIFGAR  R+LWAEAESGGSG KKK  VL
Sbjct: 121 KWKNLVTRYKGCETMEPEISRQQFPFYTELQAIFGARRERLLWAEAESGGSGLKKKMMVL 180

Query: 181 SSDEDDENEDSDGDGGDTKASGRKSKR-----KGKGNGGGSSSINHLKEILEDFMNQQIQ 240
           SSD++DEN+DSDGDGG+TK SGRK K+      G   G G SS+N LKEILEDFMNQQ+Q
Sbjct: 181 SSDDEDENDDSDGDGGETKVSGRKRKKVKGTTMGGAEGSGKSSMNELKEILEDFMNQQMQ 240

Query: 241 MEIQWREAFESREKERQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRD 298
           ME+QWREAFE+REKERQ++EMEWRR MEALEHERIMLERRWREREEQRRMR+EVRAEKRD
Sbjct: 241 MEVQWREAFEAREKERQMKEMEWRRNMEALEHERIMLERRWREREEQRRMREEVRAEKRD 300

[Close]

BLAST of Cp4.1LG08g12260 vs. ExPASy TrEMBL
Match: E5GBE8 (Transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 452 bits (1164), Expect = 2.61e-158
Identity = 250/313 (79.87%), Postives = 268/313 (85.62%), Query Frame = 0


Query: 1   MEGHN--------PHPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNLA-DQTAVN-AV 60
           MEGH+        PHPL+ LH QQQ    +QHPPPPPPP    HLHQ+LA DQ A   A+
Sbjct: 1   MEGHHHPHPHPPHPHPLIQLHQQQQ----IQHPPPPPPP----HLHQSLAVDQAATGTAI 60

Query: 61  ADRFPQWSIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWK 120
           ADRFPQWSIQETKEFLMIRAELDQ FMETKRNKLLWEITA+KMKEKGFNRSAEQCKCKWK
Sbjct: 61  ADRFPQWSIQETKEFLMIRAELDQTFMETKRNKLLWEITASKMKEKGFNRSAEQCKCKWK 120

Query: 121 NLVTRYKGCETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSD 180
           NLVTRYKGCETMEPEISRQQFPFYTELQAIFGAR  RILWAE ESGGSG KKK  VLSSD
Sbjct: 121 NLVTRYKGCETMEPEISRQQFPFYTELQAIFGARRERILWAEVESGGSGLKKKMMVLSSD 180

Query: 181 EDDENEDSDGDGGDTKASGRKSKRK-----GKGNGGGSSSINHLKEILEDFMNQQIQMEI 240
           ++DEN+DSDGDGG+TK SGRK K+      G   G G SS+N LKEILEDFMNQQ+QME+
Sbjct: 181 DEDENDDSDGDGGETKVSGRKRKKVKGTTIGGAEGSGKSSMNELKEILEDFMNQQMQMEM 240

Query: 241 QWREAFESREKERQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALI 298
           QWREAFE+REKERQ++EMEWRR MEALEHERIMLERRWREREEQRRMR+EVRAEKRDALI
Sbjct: 241 QWREAFEAREKERQMKEMEWRRNMEALEHERIMLERRWREREEQRRMREEVRAEKRDALI 300

[Close]

BLAST of Cp4.1LG08g12260 vs. ExPASy TrEMBL
Match: A0A5D3DMW3 (Trihelix transcription factor GT-3b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00730 PE=4 SV=1)

HSP 1 Score: 452 bits (1164), Expect = 2.61e-158
Identity = 250/313 (79.87%), Postives = 268/313 (85.62%), Query Frame = 0


Query: 1   MEGHN--------PHPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNLA-DQTAVN-AV 60
           MEGH+        PHPL+ LH QQQ    +QHPPPPPPP    HLHQ+LA DQ A   A+
Sbjct: 1   MEGHHHPHPHPPHPHPLIQLHQQQQ----IQHPPPPPPP----HLHQSLAVDQAATGTAI 60

Query: 61  ADRFPQWSIQETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWK 120
           ADRFPQWSIQETKEFLMIRAELDQ FMETKRNKLLWEITA+KMKEKGFNRSAEQCKCKWK
Sbjct: 61  ADRFPQWSIQETKEFLMIRAELDQTFMETKRNKLLWEITASKMKEKGFNRSAEQCKCKWK 120

Query: 121 NLVTRYKGCETMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSD 180
           NLVTRYKGCETMEPEISRQQFPFYTELQAIFGAR  RILWAE ESGGSG KKK  VLSSD
Sbjct: 121 NLVTRYKGCETMEPEISRQQFPFYTELQAIFGARRERILWAEVESGGSGLKKKMMVLSSD 180

Query: 181 EDDENEDSDGDGGDTKASGRKSKRK-----GKGNGGGSSSINHLKEILEDFMNQQIQMEI 240
           ++DEN+DSDGDGG+TK SGRK K+      G   G G SS+N LKEILEDFMNQQ+QME+
Sbjct: 181 DEDENDDSDGDGGETKVSGRKRKKVKGTTIGGAEGSGKSSMNELKEILEDFMNQQMQMEM 240

Query: 241 QWREAFESREKERQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALI 298
           QWREAFE+REKERQ++EMEWRR MEALEHERIMLERRWREREEQRRMR+EVRAEKRDALI
Sbjct: 241 QWREAFEAREKERQMKEMEWRRNMEALEHERIMLERRWREREEQRRMREEVRAEKRDALI 300

[Close]

BLAST of Cp4.1LG08g12260 vs. TAIR 10
Match: AT2G38250.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 268.5 bits (685), Expect = 6.6e-72
Identity = 161/301 (53.49%), Postives = 201/301 (66.78%), Query Frame = 0


Query: 1   MEGHNPHPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQWSIQ 60
           M+GH  H     HL Q Q+    H           H      +  +  AV DRFPQWS++
Sbjct: 1   MDGHQHH-----HLHQLQYLNKHH----------LHTQSQTPEIASPVAVGDRFPQWSVE 60

Query: 61  ETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCE 120
           ETKE + IR ELDQ FMETKRNKLLWE+ + KM++K F RS EQCKCKWKNLVTR+KGCE
Sbjct: 61  ETKELIGIRGELDQTFMETKRNKLLWEVISNKMRDKSFPRSPEQCKCKWKNLVTRFKGCE 120

Query: 121 TMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSK--KKTTVLSSDEDDE--NE 180
           TME E +RQQFPFY ++Q IF  RM R+LWAE+E GG G+    +    SSDE++E  NE
Sbjct: 121 TMEAETARQQFPFYDDMQNIFTTRMQRMLWAESEGGGGGTSGAARKREYSSDEEEENVNE 180

Query: 181 DSDGDGGDTKASGRKSK--RKGKGNGGGSSSINHLKEILEDFMNQQIQMEIQWREAFESR 240
           +      D K    K    +K KG    S+S N ++E+LE+FM  Q++ME +WRE +E+R
Sbjct: 181 ELVDVSNDPKILNPKKNIAKKRKGGSNSSNSNNGVREVLEEFMRHQVRMESEWREGWEAR 240

Query: 241 EKERQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVRAEKRDALITALLNKLRR 296
           EKER  +E EWRRKME LE ER+ +ER WR+REEQRR R+E+RAEKRD+LI ALL KL R
Sbjct: 241 EKERAEKEEEWRRKMEELEKERLAMERMWRDREEQRRSREEMRAEKRDSLINALLAKLTR 286

[Close]

BLAST of Cp4.1LG08g12260 vs. TAIR 10
Match: AT5G01380.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 255.8 bits (652), Expect = 4.4e-68
Identity = 161/318 (50.63%), Postives = 198/318 (62.26%), Query Frame = 0


Query: 1   MEGHNPHPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQWSIQ 60
           M+  NP    H H Q   H   Q   PPPP      +     D        +R PQWSI+
Sbjct: 1   MDRRNPFQHHHHHHQLHHHLIQQQQLPPPPLSTTATM-----DPGGGGGGGERIPQWSIE 60

Query: 61  ETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCE 120
           ETKE L IR ELDQ FMETKRNKLLWE+ AAKM +KGF RSAEQCK KWKNLVTRYK CE
Sbjct: 61  ETKELLAIREELDQTFMETKRNKLLWEVVAAKMADKGFVRSAEQCKSKWKNLVTRYKACE 120

Query: 121 TMEPEISRQQFPFYTELQAIFGARMHRILWAEAESGGSGSKKKTTVLSSDEDDENEDSDG 180
           T EP+  RQQFPFY E+Q+IF ARM R+LW+EA    + SK+K    SSD+++E  D   
Sbjct: 121 TTEPDAIRQQFPFYNEIQSIFEARMQRMLWSEATEPSTSSKRKHHQFSSDDEEEEVDEPN 180

Query: 181 DG--------------------GDTKASGRKSKRKGKGNGGGS---SSINHLKEILEDFM 240
                                   T  + RK  +KGKG   G+   ++ N LK+ILE+FM
Sbjct: 181 QDINEELLSLVETQKRETEVITTSTSTNPRKRAKKGKGVASGTKAETAGNTLKDILEEFM 240

Query: 241 NQQIQMEIQWREAFESREKERQIREMEWRRKMEALEHERIMLERRWREREEQRRMRDEVR 296
            Q ++ME +WR+A+E +E ER+ RE EWRR+M  LE ER   ERRW EREE+RR+R+E R
Sbjct: 241 RQTVKMEKEWRDAWEMKEIEREKREKEWRRRMAELEEERAATERRWMEREEERRLREEAR 300

[Close]

BLAST of Cp4.1LG08g12260 vs. TAIR 10
Match: AT1G13450.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.6e-12
Identity = 45/148 (30.41%), Postives = 71/148 (47.97%), Query Frame = 0


Query: 1   MEGHNPHPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQWSIQ 60
           ++ H+ H   + HL Q Q            PQQQ  L ++  +   V A   R   W   
Sbjct: 43  LQSHHHHNHHNHHLHQSQ------------PQQQILLGESSGEDHEVKAPKKRAETWVQD 102

Query: 61  ETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCE 120
           ET+  +M R  +D  F  +K NK LWE  ++KM+EKGF+RS   C  KW+NL+  +K  +
Sbjct: 103 ETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKAK 162

Query: 121 TMEPEISRQQFPFYTELQAIFGARMHRI 149
             +      +  +Y E++ I   R  ++
Sbjct: 163 HHDRGNGSAKMSYYKEIEDILRERSKKV 178

[Close]

BLAST of Cp4.1LG08g12260 vs. TAIR 10
Match: AT1G13450.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.6e-12
Identity = 45/148 (30.41%), Postives = 71/148 (47.97%), Query Frame = 0


Query: 1   MEGHNPHPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQWSIQ 60
           ++ H+ H   + HL Q Q            PQQQ  L ++  +   V A   R   W   
Sbjct: 43  LQSHHHHNHHNHHLHQSQ------------PQQQILLGESSGEDHEVKAPKKRAETWVQD 102

Query: 61  ETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCE 120
           ET+  +M R  +D  F  +K NK LWE  ++KM+EKGF+RS   C  KW+NL+  +K  +
Sbjct: 103 ETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKAK 162

Query: 121 TMEPEISRQQFPFYTELQAIFGARMHRI 149
             +      +  +Y E++ I   R  ++
Sbjct: 163 HHDRGNGSAKMSYYKEIEDILRERSKKV 178

[Close]

BLAST of Cp4.1LG08g12260 vs. TAIR 10
Match: AT1G13450.3 (Homeodomain-like superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 2.6e-12
Identity = 45/148 (30.41%), Postives = 71/148 (47.97%), Query Frame = 0


Query: 1   MEGHNPHPLVHLHLQQQQHQQLQHPPPPPPPQQQQHLHQNLADQTAVNAVADRFPQWSIQ 60
           ++ H+ H   + HL Q Q            PQQQ  L ++  +   V A   R   W   
Sbjct: 43  LQSHHHHNHHNHHLHQSQ------------PQQQILLGESSGEDHEVKAPKKRAETWVQD 102

Query: 61  ETKEFLMIRAELDQRFMETKRNKLLWEITAAKMKEKGFNRSAEQCKCKWKNLVTRYKGCE 120
           ET+  +M R  +D  F  +K NK LWE  ++KM+EKGF+RS   C  KW+NL+  +K  +
Sbjct: 103 ETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRSPTMCTDKWRNLLKEFKKAK 162

Query: 121 TMEPEISRQQFPFYTELQAIFGARMHRI 149
             +      +  +Y E++ I   R  ++
Sbjct: 163 HHDRGNGSAKMSYYKEIEDILRERSKKV 178

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g12260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80450	9.2e-71	53.49	Trihelix transcription factor GT-3b OS=Arabidopsis thaliana OX=3702 GN=GT-3B PE=...	[more]
Q9SDW0	6.2e-67	50.63	Trihelix transcription factor GT-3a OS=Arabidopsis thaliana OX=3702 GN=GT-3A PE=...	[more]
Q9FX53	3.7e-11	30.41	Trihelix transcription factor GT-1 OS=Arabidopsis thaliana OX=3702 GN=GT-1 PE=1 ...	[more]
Q9LU92	3.1e-10	28.48	Trihelix transcription factor GT-4 OS=Arabidopsis thaliana OX=3702 GN=GT-4 PE=2 ...	[more]
Q9C882	6.8e-05	27.22	Trihelix transcription factor GTL1 OS=Arabidopsis thaliana OX=3702 GN=GTL1 PE=1 ...	[more]

BLAST of Cp4.1LG08g12260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540206.1	7.14e-205	100.00	trihelix transcription factor GT-3b-like [Cucurbita pepo subsp. pepo]	[more]
KAG7027894.1	5.19e-200	98.66	Trihelix transcription factor GT-3a, partial [Cucurbita argyrosperma subsp. argy...	[more]
KAG6596342.1	1.05e-199	98.66	Trihelix transcription factor GT-3a, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022963584.1	5.35e-198	98.00	trihelix transcription factor GT-3b [Cucurbita moschata]	[more]
XP_022971581.1	6.21e-195	96.01	trihelix transcription factor GT-3b-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG08g12260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKL6	2.59e-198	98.00	trihelix transcription factor GT-3b OS=Cucurbita moschata OX=3662 GN=LOC11146385...	[more]
A0A6J1I3N7	3.00e-195	96.01	trihelix transcription factor GT-3b-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A0A0LF98	1.39e-158	79.11	Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G731130 PE...	[more]
E5GBE8	2.61e-158	79.87	Transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5D3DMW3	2.61e-158	79.87	Trihelix transcription factor GT-3b OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Cp4.1LG08g12260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38250.1	6.6e-72	53.49	Homeodomain-like superfamily protein	[more]
AT5G01380.1	4.4e-68	50.63	Homeodomain-like superfamily protein	[more]
AT1G13450.1	2.6e-12	30.41	Homeodomain-like superfamily protein	[more]
AT1G13450.2	2.6e-12	30.41	Homeodomain-like superfamily protein	[more]
AT1G13450.3	2.6e-12	30.41	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 242..269
None	No IPR available	GENE3D	1.10.10.60		coord: 57..118 e-value: 1.8E-17 score: 65.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..206
None	No IPR available	PANTHER	PTHR21654	FAMILY NOT NAMED	coord: 31..295
None	No IPR available	PANTHER	PTHR21654:SF85	TRANSCRIPTION FACTOR MYB FAMILY-RELATED	coord: 31..295
None	No IPR available	CDD	cd12203	GT1	coord: 55..120 e-value: 1.45143E-24 score: 91.9579
None	No IPR available	SUPERFAMILY	81995	beta-sandwich domain of Sec23/24	coord: 4..61
IPR044822	Myb/SANT-like DNA-binding domain 4	PFAM	PF13837	Myb_DNA-bind_4	coord: 56..140 e-value: 8.0E-19 score: 67.8
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 57..113 score: 6.771437

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g12260.1	Cp4.1LG08g12260.1	mRNA