Cp4.1LG08g11990 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g11990
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	rop guanine nucleotide exchange factor 7-like
Location	Cp4.1LG08: 8751655 .. 8754661 (-)
RNA-Seq Expression	Cp4.1LG08g11990
Synteny	Cp4.1LG08g11990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTGATTTTCACCCACCAAGAAGAGAGACAACCTGTTCCAATTACCAATCATTCGCTTAACCGCACTGCCTCCGATCGTTTCAACCCATTCTTAACTCTGAGCTGCTGGGTTTCCAAATCTTCTCAAAAACTGCGTCATAGGGCTCGATTTTCATCTGGGTTTTGCTGCGGAGGGATGGAATACAAGGGAATGGTGGTGAATAACTCTACGTTTTGTTCTTCCCCTGTTTTTCTTGAACAAGTTGCGATCGAAACTGGAGAGAAATGCGATGGGTTTGGTGATGCACGTAAGGTGTTTGATGAAAAGACTGGGGTTGGGGAAACTAGTTTAAGTGATTCCAGTTCTGATTTGTTGTCATCGGAAGCAACAGGGCATGAAGGGCAGAGCCATGAGGAAGAGTCGTCGTTGTCGTCTTCTTCGTCGACTTTAATGGGGTGGCCTCTTCACCGGACGGCGGCTGAAGAGCGCAATTTTGACGACCAACAACTGGAAACACAAGTGTCACCAGTGTCAGGTATGTCTCTATTTACATCCAAATTTATAAGTAGTAAAATATTTGAACAAACTTGTAATTGTGGGAAAATAAGAAGCAAAAGAGGAATTTTGTTGAATTTGATGTGTTGTGGGGTTGCAGAGACAGAGATGATGAAGGAGAGGTTTGCAAAGCTGCTACTGGGAGAAGACATGTCAGGGTGTGGCAATGGAGTCTCTACTGCTTTGGCCATATCTAATGCCATCACCAATCTCTGTGGTATGCCCTCTCTTCATAAATTTTCATTACTTTTATACAAAGCTCTCATGCTTTGGTCGTCCAACATGAACTTGCAGCCACTCTATTCGGACAACTATGGAGATTACAACCTTTAGCCCCTCACATAAAAGCAATGTGGCAAAGAGAAATGGAATTGCTGCTATCTGTTACCAACCACATCGTCCAACTGATACCCCTTTCCCAAACATTCCCAGATGGAACCAAACTCGAGGTCCAAATTCAATACACATTTCTTAATCATCTCTTTTCCCAAATCCCATCATGATCTTCCTTCTTTGGCTCATCAGATAATGACTTCCCGCCCTCGTTCAGATCTCTACGTCAGTCTCCCAGCTCTTCGTAAGCTAGACCACATGCTGCTCGTAAGTGCTACGTATTCATCTTTGTATGTAAATTTGTTGGATGATGAAAGTTCCATGTCTGCTCATTTAGGGAATGATCATGGATTTATAATCAAGGAATACTCTCTCCATTGGTATAAGGCCTTTTGGGAAGCCCAAAGTAAAGCCACGAGAGCTTATTCTTAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCGTCTAATGATACGTGGTATCAGAGCCATGCTCTAAACTTAGTCGTGCCAATAGATTGGTAAATTCTCAAATGTCGAACAAAGGACTCCAAAAGAAAAGGAGTCGAGCCTCCTCGAAGGCAGTAAAAAATGACTAAGACTCCAAAGGAGTCGAGCCTCAATTAAGGGGAGGCGTACTTTGTTCGAAGGGAGGTGTTGGATGATGAAAGTCCCACATCGGCTATACTCTTTCCATTGGTATGAGGCCTTTTAAGGAAGTCCAAAGCAAAGCCACGAGAGTTTATGCTCAAAGTGGACGATATCATACCATGGTGGAGAGTCGGGTTCGTCTAACAAAATTAAATTTAAATTTGGTGTCATTTTGCAGGATATATTGGATAGTTTCGTTGACTCTGAGTTCTGGTACGTTGATCAAGGGATTCTTGCCGCCGCCGACGCCGATAGGTCTTCCTCGCGGCAAGAGGACAAGTGGTGGCTTCCGATCCCCAGAGTCCCGAGTGGATCAGGCCTCTCTGAAGCTGCAAGAAGGCAGCTGCAGCACAAGCGCGACAGCACTAACCAAATTCTCAAAGCTGTCATGGCTATCAACTCCCTTACTCTGGCCGACATGGATGTCCCTGCTTCATATCTGGAGGCAATTCCAAAAGTAAGCCAATTTTAAGTTTACAATCACTTCCCTTTCTGGGTTGAGTCTCAATTTAAGCATTAATCAATTTCAGAATGGACGAGGCAGCTTAGGAGAAGAAATTTACAGGTACATTTCGTCGGACGAATTTTCCCCTGTTTACGTATTGCAATGTCTAGATATCTCCTCCGAACACCAAGCCGTGGAGATAGCCAACCGAGTGGAGGCCGCAATGTACGCATGGCGGAATTCATCACGTTCCACTTCAAAATCGTCATGGGAAATGCTGAAAGAATTGGTAGTGGATGCAGAGAAGAGCCAAGTATTTGCAGAGAGAGCAGAGTCCTTACTCTTGTTCCTCAAACAACAGTTCCCCAATCTCCCTCAAACCAGCCTAGACATGAGTAAAATCCAATTCAACAAGGTCCAATTATCTCAATTTCCCACTTCAAATCTTCTACGAACACGATCTGAATTGGGTTGGTTTTGTTTCAGGATGTGGGGAAGGCCATTTTGGAGAGCTACTCAAGAGTGCTGGAGAGCTTGGCGTTCAACATTGTGGCTCGTATTGACGATTTGGTTTATGTGGATGATCTGACGAAGCATTCCGATCAAATTCCGGGGATTTCCCAACTGGGAGTTAGTGGTCGGATTCAATTCCCGGTGCCATTTTCCAGCTCCCCGTTCACCAAACCCAGTTTTTCGGCTGTGGATCTTGTTACCCTTGCCAAGGGTGGAACGCGATCGCCGATTCACAAAGATATGGTTCAACAACCAGAAAAATGTAAGTAGAACAGAGGACAAGATTATTAAATTTCAAAGATATGTAACATAATCTTTAATTGTATTACAAGGGTAAGGTTCACTTCTAAAAAGCATTTAATAGTGGTGAGTATCCTCACTTTTTACACAACAGTCCCAGGTTCCATCCTTGGCGATGAATATTTTCTTGTAAAAAGAATTTTATTTTATGAAAACGTTCGATTATCAAAATATTGTTGTAGTAACGCAGTGATTATCTTTGCCTCTAGAGGAGGCGACA

mRNA sequence

ATGGACTTGATTTTCACCCACCAAGAAGAGAGACAACCTGTTCCAATTACCAATCATTCGCTTAACCGCACTGCCTCCGATCGTTTCAACCCATTCTTAACTCTGAGCTGCTGGGTTTCCAAATCTTCTCAAAAACTGCGTCATAGGGCTCGATTTTCATCTGGGTTTTGCTGCGGAGGGATGGAATACAAGGGAATGGTGGTGAATAACTCTACGTTTTGTTCTTCCCCTGTTTTTCTTGAACAAGTTGCGATCGAAACTGGAGAGAAATGCGATGGGTTTGGTGATGCACGTAAGGTGTTTGATGAAAAGACTGGGGTTGGGGAAACTAGTTTAAGTGATTCCAGTTCTGATTTGTTGTCATCGGAAGCAACAGGGCATGAAGGGCAGAGCCATGAGGAAGAGTCGTCGTTGTCGTCTTCTTCGTCGACTTTAATGGGGTGGCCTCTTCACCGGACGGCGGCTGAAGAGCGCAATTTTGACGACCAACAACTGGAAACACAAGATGTGGGGAAGGCCATTTTGGAGAGCTACTCAAGAGTGCTGGAGAGCTTGGCGTTCAACATTGTGGCTCGTATTGACGATTTGGTTTATGTGGATGATCTGACGAAGCATTCCGATCAAATTCCGGGGATTTCCCAACTGGGAGTTAGTGGTCGGATTCAATTCCCGGTGCCATTTTCCAGCTCCCCGTTCACCAAACCCAGTTTTTCGGCTGTGGATCTTGTTACCCTTGCCAAGGGTGGAACGCGATCGCCGATTCACAAAGATATGGTTCAACAACCAGAAAAATGTAAGTAGAACAGAGGACAAGATTATTAAATTTCAAAGATATGTAACATAATCTTTAATTGTATTACAAGGGTAAGGTTCACTTCTAAAAAGCATTTAATAGTGGTGAGTATCCTCACTTTTTACACAACAGTCCCAGGTTCCATCCTTGGCGATGAATATTTTCTTGTAAAAAGAATTTTATTTTATGAAAACGTTCGATTATCAAAATATTGTTGTAGTAACGCAGTGATTATCTTTGCCTCTAGAGGAGGCGACA

Coding sequence (CDS)

ATGGACTTGATTTTCACCCACCAAGAAGAGAGACAACCTGTTCCAATTACCAATCATTCGCTTAACCGCACTGCCTCCGATCGTTTCAACCCATTCTTAACTCTGAGCTGCTGGGTTTCCAAATCTTCTCAAAAACTGCGTCATAGGGCTCGATTTTCATCTGGGTTTTGCTGCGGAGGGATGGAATACAAGGGAATGGTGGTGAATAACTCTACGTTTTGTTCTTCCCCTGTTTTTCTTGAACAAGTTGCGATCGAAACTGGAGAGAAATGCGATGGGTTTGGTGATGCACGTAAGGTGTTTGATGAAAAGACTGGGGTTGGGGAAACTAGTTTAAGTGATTCCAGTTCTGATTTGTTGTCATCGGAAGCAACAGGGCATGAAGGGCAGAGCCATGAGGAAGAGTCGTCGTTGTCGTCTTCTTCGTCGACTTTAATGGGGTGGCCTCTTCACCGGACGGCGGCTGAAGAGCGCAATTTTGACGACCAACAACTGGAAACACAAGATGTGGGGAAGGCCATTTTGGAGAGCTACTCAAGAGTGCTGGAGAGCTTGGCGTTCAACATTGTGGCTCGTATTGACGATTTGGTTTATGTGGATGATCTGACGAAGCATTCCGATCAAATTCCGGGGATTTCCCAACTGGGAGTTAGTGGTCGGATTCAATTCCCGGTGCCATTTTCCAGCTCCCCGTTCACCAAACCCAGTTTTTCGGCTGTGGATCTTGTTACCCTTGCCAAGGGTGGAACGCGATCGCCGATTCACAAAGATATGGTTCAACAACCAGAAAAATGTAAGTAG

Protein sequence

MDLIFTHQEERQPVPITNHSLNRTASDRFNPFLTLSCWVSKSSQKLRHRARFSSGFCCGGMEYKGMVVNNSTFCSSPVFLEQVAIETGEKCDGFGDARKVFDEKTGVGETSLSDSSSDLLSSEATGHEGQSHEEESSLSSSSSTLMGWPLHRTAAEERNFDDQQLETQDVGKAILESYSRVLESLAFNIVARIDDLVYVDDLTKHSDQIPGISQLGVSGRIQFPVPFSSSPFTKPSFSAVDLVTLAKGGTRSPIHKDMVQQPEKCK

Homology

[Close]

BLAST of Cp4.1LG08g11990 vs. ExPASy Swiss-Prot
Match: Q9LZN0 (Rop guanine nucleotide exchange factor 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF7 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.2e-13
Identity = 48/77 (62.34%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 168 QDVGKAILESYSRVLESLAFNIVARIDDLVYVDDLTKH-SDQIPGISQLGVSGR-----I 227
           +D+GK+ILESYSRVLESLAFNIVARIDDL++VDDLT+H SDQIP  + LG +G      I
Sbjct: 398 KDIGKSILESYSRVLESLAFNIVARIDDLLFVDDLTRHSSDQIP--TTLGNNGNDAPKSI 457

Query: 228 QFPVPFSSSPFTKPSFS 239
             PV    S +T PS+S
Sbjct: 458 AVPV----SNYTTPSYS 468

[Close]

BLAST of Cp4.1LG08g11990 vs. ExPASy Swiss-Prot
Match: F4K295 (Rop guanine nucleotide exchange factor 5 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF5 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 7.3e-11
Identity = 59/165 (35.76%), Postives = 90/165 (54.55%), Query Frame = 0


Query: 104 KTGVGETSLSDSSSDLLSSEATGHEGQSHEEESSLSSSSSTLMGWPLHR-TAAEERNFDD 163
           +T +G  + + S++  L+ E       + ++   L   S TL+     R  +  + + D 
Sbjct: 369 QTKLGVNNNTSSTTPKLTWEMVKELMAAGDKRGLLVERSETLLRCLKQRFPSLTQTSLDI 428

Query: 164 QQLE-TQDVGKAILESYSRVLESLAFNIVARIDDLVYVDDLTKHSDQIPGISQLGVSGRI 223
            +++  +D+GK+ILESYSR LESLA NI+ARIDDL+YVDDLTK SD    +S   VS  I
Sbjct: 429 SKIQWNKDIGKSILESYSRALESLASNIIARIDDLLYVDDLTKQSDDNNLLSSPAVSSII 488

Query: 224 Q----FPVPF----SSSPF-----TKPSFSAVDLVTLAKGGTRSP 254
                 P+P+    S +P+     T P FS   +++  KG  R+P
Sbjct: 489 AHKKVVPLPYLISASGTPYRTSFSTTPGFSP-SMISPKKGERRTP 532

[Close]

BLAST of Cp4.1LG08g11990 vs. ExPASy Swiss-Prot
Match: Q93ZY2 (Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF1 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 4.8e-10
Identity = 46/111 (41.44%), Postives = 65/111 (58.56%), Query Frame = 0


Query: 168 QDVGKAILESYSRVLESLAFNIVARIDDLVYVDDLTKHS----DQIPGISQLGVSGRIQF 227
           +DVG++ILESYSRV+ES+AFNI ARIDD++YVDD  + S    + +   S  G++ +  F
Sbjct: 420 KDVGQSILESYSRVMESMAFNITARIDDVLYVDDAMRRSISVTESLSLFSINGLNPQKAF 479

Query: 228 PVPFS--SSPFTKPSFS--------AVDLVTLAKGGTRSPIHKDMVQQPEK 265
            V  S   SPF  P+ S        A  L ++ + GTR    K +V + EK
Sbjct: 480 SVQSSPHGSPFATPALSVASRSPRRAPPLYSVKRNGTR---EKGIVGETEK 527

[Close]

BLAST of Cp4.1LG08g11990 vs. ExPASy Swiss-Prot
Match: A4IJ27 (Rop guanine nucleotide exchange factor 3 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF3 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.2e-07
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 0


Query: 168 QDVGKAILESYSRVLESLAFNIVARIDDLVYVDDLTKHSD 208
           +DVGKA+LESYSRVLE LAFNIVA IDD++YVD   + S+
Sbjct: 434 KDVGKAVLESYSRVLEGLAFNIVAWIDDVLYVDKTMRGSE 473

[Close]

BLAST of Cp4.1LG08g11990 vs. ExPASy Swiss-Prot
Match: Q9LQ89 (Rop guanine nucleotide exchange factor 2 OS=Arabidopsis thaliana OX=3702 GN=ROPGEF2 PE=1 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 6.4e-07
Identity = 27/33 (81.82%), Postives = 31/33 (93.94%), Query Frame = 0


Query: 168 QDVGKAILESYSRVLESLAFNIVARIDDLVYVD 201
           +DVGKA+LESYSRVLE LAFNIVA IDD++YVD
Sbjct: 446 KDVGKAVLESYSRVLEGLAFNIVAWIDDVLYVD 478

[Close]

BLAST of Cp4.1LG08g11990 vs. NCBI nr
Match: KAG6596384.1 (Rop guanine nucleotide exchange factor 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 431 bits (1107), Expect = 1.39e-147
Identity = 257/458 (56.11%), Postives = 263/458 (57.42%), Query Frame = 0


Query: 1   MDLIFTHQEERQPVPITNHSLNRTASDRFNPFLTLSCWVSKSSQKLRHRARFSSGFCCGG 60
           MDLIFTHQEERQPVPITNHSLNR+ SDRFNPFLTLSCWVSKSSQKLRHRARFS+GFCCGG
Sbjct: 1   MDLIFTHQEERQPVPITNHSLNRSGSDRFNPFLTLSCWVSKSSQKLRHRARFSTGFCCGG 60

Query: 61  MEYKGMVVNNSTFCSSPVFLEQVAIETGEKCDGFGDARKVFDEKTGVGETSLSDSSSDLL 120
           MEYKGMVVNNSTFCSSPVFLE+VAIETGEKCDGFGDARKVFDEKTGVGE+SLSDSSSDLL
Sbjct: 61  MEYKGMVVNNSTFCSSPVFLEEVAIETGEKCDGFGDARKVFDEKTGVGESSLSDSSSDLL 120

Query: 121 SSEATGHEGQSHEEESSLSSSSSTLMGWPLHRTAAEERNFDDQQLETQ------------ 180
           SSEATGHEGQSHEEESS SSSSSTLMGWPLHRTAAEERNFD +QLETQ            
Sbjct: 121 SSEATGHEGQSHEEESS-SSSSSTLMGWPLHRTAAEERNFDGRQLETQVSPVSGILAAAD 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ADRSSSRQEDKWWLPIPRVPSGSGLSEAARRQLQHKRDSTNQILKAVMAINSLTLADMDV 240

Query: 241 ------------------------------------------------------------ 266
                                                                       
Sbjct: 241 PASYLEALPKNGRGSLGEEIYRYISSDEFSPVYVLECLDISSEHQAVEIANRVEAAMYAW 300

[Close]

BLAST of Cp4.1LG08g11990 vs. NCBI nr
Match: XP_023540059.1 (rop guanine nucleotide exchange factor 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398 bits (1022), Expect = 7.13e-133
Identity = 266/590 (45.08%), Postives = 266/590 (45.08%), Query Frame = 0


Query: 1   MDLIFTHQEERQPVPITNHSLNRTASDRFNPFLTLSCWVSKSSQKLRHRARFSSGFCCGG 60
           MDLIFTHQEERQPVPITNHSLNRTASDRFNPFLTLSCWVSKSSQKLRHRARFSSGFCCGG
Sbjct: 1   MDLIFTHQEERQPVPITNHSLNRTASDRFNPFLTLSCWVSKSSQKLRHRARFSSGFCCGG 60

Query: 61  MEYKGMVVNNSTFCSSPVFLEQVAIETGEKCDGFGDARKVFDEKTGVGETSLSDSSSDLL 120
           MEYKGMVVNNSTFCSSPVFLEQVAIETGEKCDGFGDARKVFDEKTGVGETSLSDSSSDLL
Sbjct: 61  MEYKGMVVNNSTFCSSPVFLEQVAIETGEKCDGFGDARKVFDEKTGVGETSLSDSSSDLL 120

Query: 121 SSEATGHEGQSHEEESSLSSSSSTLMGWPLHRTAAEERNFDDQQLETQ------------ 180
           SSEATGHEGQSHEEESSLSSSSSTLMGWPLHRTAAEERNFDDQQLETQ            
Sbjct: 121 SSEATGHEGQSHEEESSLSSSSSTLMGWPLHRTAAEERNFDDQQLETQVSPVSETEMMKE 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 RFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLQPLAPHIKAMWQREMELL 240

Query: 241 ------------------------------------------------------------ 266
                                                                       
Sbjct: 241 LSVTNHIVQLIPLSQTFPDGTKLEIMTSRPRSDLYVSLPALRKLDHMLLDILDSFVDSEF 300

[Close]

BLAST of Cp4.1LG08g11990 vs. NCBI nr
Match: KAG6596381.1 (Rop guanine nucleotide exchange factor 7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027930.1 Rop guanine nucleotide exchange factor 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 380 bits (975), Expect = 8.56e-126
Identity = 257/590 (43.56%), Postives = 263/590 (44.58%), Query Frame = 0


Query: 1   MDLIFTHQEERQPVPITNHSLNRTASDRFNPFLTLSCWVSKSSQKLRHRARFSSGFCCGG 60
           MDLIFTHQEERQPVPITNHSLNR+ SDRFNPFLTLSCWVSKSSQKLRHRARFS+GFCCGG
Sbjct: 1   MDLIFTHQEERQPVPITNHSLNRSGSDRFNPFLTLSCWVSKSSQKLRHRARFSTGFCCGG 60

Query: 61  MEYKGMVVNNSTFCSSPVFLEQVAIETGEKCDGFGDARKVFDEKTGVGETSLSDSSSDLL 120
           MEYKGMVVNNSTFCSSPVFLE+VAIETGEKCDGFGDARKVFDEKTGVGE+SLSDSSSDLL
Sbjct: 61  MEYKGMVVNNSTFCSSPVFLEEVAIETGEKCDGFGDARKVFDEKTGVGESSLSDSSSDLL 120

Query: 121 SSEATGHEGQSHEEESSLSSSSSTLMGWPLHRTAAEERNFDDQQLETQ------------ 180
           SSEATGHEGQSHEEESS SSSSSTLMGWPLHRTAAEERNFD +QLETQ            
Sbjct: 121 SSEATGHEGQSHEEESS-SSSSSTLMGWPLHRTAAEERNFDGRQLETQVSPVSETEMMKE 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 RFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLQPLAPHIKAMWQREMELL 240

Query: 241 ------------------------------------------------------------ 266
                                                                       
Sbjct: 241 LSVTNHIVQLIPVSQTFPDGTKLEIMTSRPRSDLYVSLPALRKLDHMLLDILDSFVDSEF 300

[Close]

BLAST of Cp4.1LG08g11990 vs. NCBI nr
Match: XP_022941762.1 (rop guanine nucleotide exchange factor 7-like [Cucurbita moschata])

HSP 1 Score: 380 bits (975), Expect = 8.56e-126
Identity = 257/590 (43.56%), Postives = 263/590 (44.58%), Query Frame = 0


Query: 1   MDLIFTHQEERQPVPITNHSLNRTASDRFNPFLTLSCWVSKSSQKLRHRARFSSGFCCGG 60
           MDLIFTHQEERQPVPITNHSLNR+ SDRFNPFLTLSCWVSKSSQKLRHRARFS+GFCCGG
Sbjct: 1   MDLIFTHQEERQPVPITNHSLNRSGSDRFNPFLTLSCWVSKSSQKLRHRARFSTGFCCGG 60

Query: 61  MEYKGMVVNNSTFCSSPVFLEQVAIETGEKCDGFGDARKVFDEKTGVGETSLSDSSSDLL 120
           MEYKGMVVNNSTFCSSPVFLE+VAIETGEKCDGFGDARKVFDEKTGVGE+SLSDSSSDLL
Sbjct: 61  MEYKGMVVNNSTFCSSPVFLEEVAIETGEKCDGFGDARKVFDEKTGVGESSLSDSSSDLL 120

Query: 121 SSEATGHEGQSHEEESSLSSSSSTLMGWPLHRTAAEERNFDDQQLETQ------------ 180
           SSEATGHEGQSHEEESS SSSSSTLMGWPLHRTAAEERNFD +QLETQ            
Sbjct: 121 SSEATGHEGQSHEEESS-SSSSSTLMGWPLHRTAAEERNFDGRQLETQVSPVSETEMMKE 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 RFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLQPLASHIKAMWQREMELL 240

Query: 241 ------------------------------------------------------------ 266
                                                                       
Sbjct: 241 LSVTNHIVQLIPVSQTFPDGTKLEIMTSRPRSDLYVSLPALRKLDHMLLDILDSFVDSAF 300

[Close]

BLAST of Cp4.1LG08g11990 vs. NCBI nr
Match: XP_022971231.1 (rop guanine nucleotide exchange factor 7-like [Cucurbita maxima])

HSP 1 Score: 364 bits (934), Expect = 1.33e-119
Identity = 251/590 (42.54%), Postives = 259/590 (43.90%), Query Frame = 0


Query: 1   MDLIFTHQEERQPVPITNHSLNRTASDRFNPFLTLSCWVSKSSQKLRHRARFSSGFCCGG 60
           MDLIFTHQEER+PVPITNHSLNR +SDRFNPFLTLS WVSKS+QKLRHRARFS+GFCCGG
Sbjct: 1   MDLIFTHQEEREPVPITNHSLNRISSDRFNPFLTLSYWVSKSAQKLRHRARFSTGFCCGG 60

Query: 61  MEYKGMVVNNSTFCSSPVFLEQVAIETGEKCDGFGDARKVFDEKTGVGETSLSDSSSDLL 120
           MEYKGMVVNNSTFCSSPVFLE+VAIETGEKCDGFGDA KVFDEK+GVGE+SLSDSS DLL
Sbjct: 61  MEYKGMVVNNSTFCSSPVFLEEVAIETGEKCDGFGDALKVFDEKSGVGESSLSDSSPDLL 120

Query: 121 SSEATGHEGQSHEEE-SSLSSSSSTLMGWPLHRTAAEERNFDDQQLETQ----------- 180
           SSEATGHEGQSHEEE SS SSSSSTLMGWPLHRTAAEERNFDD+QLETQ           
Sbjct: 121 SSEATGHEGQSHEEEPSSSSSSSSTLMGWPLHRTAAEERNFDDRQLETQVSPVSETEMMK 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ERFAKLLLGEDMSGCGNGVSTALAISNAITNLCASLFGQLWRLQPLAPHKKAMWQREMEL 240

Query: 241 ------------------------------------------------------------ 266
                                                                       
Sbjct: 241 LLSVTNHIVQLIPISQTFPDGTKLEIMTSRPRSDLYVSLPALRKLDRMLLDILDSFVDSE 300

[Close]

BLAST of Cp4.1LG08g11990 vs. ExPASy TrEMBL
Match: A0A6J1FND9 (rop guanine nucleotide exchange factor 7-like OS=Cucurbita moschata OX=3662 GN=LOC111447031 PE=4 SV=1)

HSP 1 Score: 380 bits (975), Expect = 4.14e-126
Identity = 257/590 (43.56%), Postives = 263/590 (44.58%), Query Frame = 0


Query: 1   MDLIFTHQEERQPVPITNHSLNRTASDRFNPFLTLSCWVSKSSQKLRHRARFSSGFCCGG 60
           MDLIFTHQEERQPVPITNHSLNR+ SDRFNPFLTLSCWVSKSSQKLRHRARFS+GFCCGG
Sbjct: 1   MDLIFTHQEERQPVPITNHSLNRSGSDRFNPFLTLSCWVSKSSQKLRHRARFSTGFCCGG 60

Query: 61  MEYKGMVVNNSTFCSSPVFLEQVAIETGEKCDGFGDARKVFDEKTGVGETSLSDSSSDLL 120
           MEYKGMVVNNSTFCSSPVFLE+VAIETGEKCDGFGDARKVFDEKTGVGE+SLSDSSSDLL
Sbjct: 61  MEYKGMVVNNSTFCSSPVFLEEVAIETGEKCDGFGDARKVFDEKTGVGESSLSDSSSDLL 120

Query: 121 SSEATGHEGQSHEEESSLSSSSSTLMGWPLHRTAAEERNFDDQQLETQ------------ 180
           SSEATGHEGQSHEEESS SSSSSTLMGWPLHRTAAEERNFD +QLETQ            
Sbjct: 121 SSEATGHEGQSHEEESS-SSSSSTLMGWPLHRTAAEERNFDGRQLETQVSPVSETEMMKE 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 RFAKLLLGEDMSGCGNGVSTALAISNAITNLCATLFGQLWRLQPLASHIKAMWQREMELL 240

Query: 241 ------------------------------------------------------------ 266
                                                                       
Sbjct: 241 LSVTNHIVQLIPVSQTFPDGTKLEIMTSRPRSDLYVSLPALRKLDHMLLDILDSFVDSAF 300

[Close]

BLAST of Cp4.1LG08g11990 vs. ExPASy TrEMBL
Match: A0A6J1I2R8 (rop guanine nucleotide exchange factor 7-like OS=Cucurbita maxima OX=3661 GN=LOC111470019 PE=4 SV=1)

HSP 1 Score: 364 bits (934), Expect = 6.45e-120
Identity = 251/590 (42.54%), Postives = 259/590 (43.90%), Query Frame = 0


Query: 1   MDLIFTHQEERQPVPITNHSLNRTASDRFNPFLTLSCWVSKSSQKLRHRARFSSGFCCGG 60
           MDLIFTHQEER+PVPITNHSLNR +SDRFNPFLTLS WVSKS+QKLRHRARFS+GFCCGG
Sbjct: 1   MDLIFTHQEEREPVPITNHSLNRISSDRFNPFLTLSYWVSKSAQKLRHRARFSTGFCCGG 60

Query: 61  MEYKGMVVNNSTFCSSPVFLEQVAIETGEKCDGFGDARKVFDEKTGVGETSLSDSSSDLL 120
           MEYKGMVVNNSTFCSSPVFLE+VAIETGEKCDGFGDA KVFDEK+GVGE+SLSDSS DLL
Sbjct: 61  MEYKGMVVNNSTFCSSPVFLEEVAIETGEKCDGFGDALKVFDEKSGVGESSLSDSSPDLL 120

Query: 121 SSEATGHEGQSHEEE-SSLSSSSSTLMGWPLHRTAAEERNFDDQQLETQ----------- 180
           SSEATGHEGQSHEEE SS SSSSSTLMGWPLHRTAAEERNFDD+QLETQ           
Sbjct: 121 SSEATGHEGQSHEEEPSSSSSSSSTLMGWPLHRTAAEERNFDDRQLETQVSPVSETEMMK 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ERFAKLLLGEDMSGCGNGVSTALAISNAITNLCASLFGQLWRLQPLAPHKKAMWQREMEL 240

Query: 241 ------------------------------------------------------------ 266
                                                                       
Sbjct: 241 LLSVTNHIVQLIPISQTFPDGTKLEIMTSRPRSDLYVSLPALRKLDRMLLDILDSFVDSE 300

[Close]

BLAST of Cp4.1LG08g11990 vs. ExPASy TrEMBL
Match: A0A6J1CWY5 (rop guanine nucleotide exchange factor 7-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015048 PE=4 SV=1)

HSP 1 Score: 164 bits (414), Expect = 1.26e-42
Identity = 109/204 (53.43%), Postives = 131/204 (64.22%), Query Frame = 0


Query: 1   MDLIFTHQE-ERQPVPITNHSL-----NRTASDRFNPFLTLSCWVSKSSQKLRHRARFSS 60
           MD+ F HQE ER P+   NHSL     N    D  NPF  L  WV KS++K+     F S
Sbjct: 1   MDVNFAHQEQERVPIRFRNHSLKLCLPNLVNHDCSNPFSILRRWVWKSARKV-----FPS 60

Query: 61  GFCCGGMEYKGMVVNNSTFCSSPVFLEQVAIETG--------EKCDGFGDARKVFDEKTG 120
           GFCC G+EYKGMVVNNSTFCSSP FLE+VA+E          EKCD FG+A KVFDEK G
Sbjct: 61  GFCCRGLEYKGMVVNNSTFCSSPAFLEEVAMEIRVEDKEGKEEKCDMFGNAHKVFDEKRG 120

Query: 121 VGETSLSDSSSDLLSSEATGHEGQSHEEESSLSSSSSTLMGWPLHRTAAEER-----NFD 180
            GE S S SSSDLL+SEATG    SH+EESS    SSTLMGWPL++T  EE      +FD
Sbjct: 121 DGE-SASSSSSDLLTSEATG----SHDEESS----SSTLMGWPLNQTVGEEGGGDKLHFD 180

Query: 181 DQQLETQDVGKA---ILESYSRVL 182
           D++LE +    +   I+E +S++L
Sbjct: 181 DRELEREASSVSEMEIMERFSKLL 190

[Close]

BLAST of Cp4.1LG08g11990 vs. ExPASy TrEMBL
Match: A0A6J1CV30 (rop guanine nucleotide exchange factor 7-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015048 PE=4 SV=1)

HSP 1 Score: 164 bits (414), Expect = 1.61e-42
Identity = 109/204 (53.43%), Postives = 131/204 (64.22%), Query Frame = 0


Query: 1   MDLIFTHQE-ERQPVPITNHSL-----NRTASDRFNPFLTLSCWVSKSSQKLRHRARFSS 60
           MD+ F HQE ER P+   NHSL     N    D  NPF  L  WV KS++K+     F S
Sbjct: 1   MDVNFAHQEQERVPIRFRNHSLKLCLPNLVNHDCSNPFSILRRWVWKSARKV-----FPS 60

Query: 61  GFCCGGMEYKGMVVNNSTFCSSPVFLEQVAIETG--------EKCDGFGDARKVFDEKTG 120
           GFCC G+EYKGMVVNNSTFCSSP FLE+VA+E          EKCD FG+A KVFDEK G
Sbjct: 61  GFCCRGLEYKGMVVNNSTFCSSPAFLEEVAMEIRVEDKEGKEEKCDMFGNAHKVFDEKRG 120

Query: 121 VGETSLSDSSSDLLSSEATGHEGQSHEEESSLSSSSSTLMGWPLHRTAAEER-----NFD 180
            GE S S SSSDLL+SEATG    SH+EESS    SSTLMGWPL++T  EE      +FD
Sbjct: 121 DGE-SASSSSSDLLTSEATG----SHDEESS----SSTLMGWPLNQTVGEEGGGDKLHFD 180

Query: 181 DQQLETQDVGKA---ILESYSRVL 182
           D++LE +    +   I+E +S++L
Sbjct: 181 DRELEREASSVSEMEIMERFSKLL 190

[Close]

BLAST of Cp4.1LG08g11990 vs. ExPASy TrEMBL
Match: A0A5D3DP03 (Rop guanine nucleotide exchange factor 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001280 PE=4 SV=1)

HSP 1 Score: 147 bits (371), Expect = 7.37e-37
Identity = 98/197 (49.75%), Postives = 123/197 (62.44%), Query Frame = 0


Query: 1   MDLIFTHQEERQPVPITNHSLNRTASDRFNPFLTLSCWVSKSSQKLRHRARFSSGFCCGG 60
           MDL FTHQ+  +P+P+TNHS   T SD FNPF  L  WVSKS++KL HRAR S+GFCC G
Sbjct: 1   MDLTFTHQQHIEPIPLTNHS--PTPSDCFNPFSNLGNWVSKSARKLCHRARSSTGFCCRG 60

Query: 61  MEYKGMVVNNSTFCSSPVFLEQVAIETG---EKCDGFGDARKVFDEKTGVGETSLSDSSS 120
           +EY+GMVVNNS F      LE VA+E     EKCD F +ARKV DEKT       S+SSS
Sbjct: 61  LEYRGMVVNNSAF------LEVVAMEIEAKEEKCDVFENARKVSDEKT------ASNSSS 120

Query: 121 DLLSSEATGH--EGQSHEEESSLSSSSSTL---------MGWPLHRTAAE-ERNFDDQQL 180
           DLL S  T    E  S +EESS SSSSS+          MGWPLH+   E E +  ++++
Sbjct: 121 DLLKSVETEEVEEQSSKDEESSSSSSSSSSSSSSTSAASMGWPLHKRVGEGEEDGVEKEV 180

Query: 181 ETQDVGKAILESYSRVL 182
            T    + + E +S++L
Sbjct: 181 STDSEMEMMKERFSKLL 183

[Close]

BLAST of Cp4.1LG08g11990 vs. TAIR 10
Match: AT5G02010.1 (RHO guanyl-nucleotide exchange factor 7 )

HSP 1 Score: 78.6 bits (192), Expect = 8.6e-15
Identity = 48/77 (62.34%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 168 QDVGKAILESYSRVLESLAFNIVARIDDLVYVDDLTKH-SDQIPGISQLGVSGR-----I 227
           +D+GK+ILESYSRVLESLAFNIVARIDDL++VDDLT+H SDQIP  + LG +G      I
Sbjct: 398 KDIGKSILESYSRVLESLAFNIVARIDDLLFVDDLTRHSSDQIP--TTLGNNGNDAPKSI 457

Query: 228 QFPVPFSSSPFTKPSFS 239
             PV    S +T PS+S
Sbjct: 458 AVPV----SNYTTPSYS 468

[Close]

BLAST of Cp4.1LG08g11990 vs. TAIR 10
Match: AT5G05940.1 (ROP guanine nucleotide exchange factor 5 )

HSP 1 Score: 69.3 bits (168), Expect = 5.2e-12
Identity = 59/165 (35.76%), Postives = 90/165 (54.55%), Query Frame = 0


Query: 104 KTGVGETSLSDSSSDLLSSEATGHEGQSHEEESSLSSSSSTLMGWPLHR-TAAEERNFDD 163
           +T +G  + + S++  L+ E       + ++   L   S TL+     R  +  + + D 
Sbjct: 369 QTKLGVNNNTSSTTPKLTWEMVKELMAAGDKRGLLVERSETLLRCLKQRFPSLTQTSLDI 428

Query: 164 QQLE-TQDVGKAILESYSRVLESLAFNIVARIDDLVYVDDLTKHSDQIPGISQLGVSGRI 223
            +++  +D+GK+ILESYSR LESLA NI+ARIDDL+YVDDLTK SD    +S   VS  I
Sbjct: 429 SKIQWNKDIGKSILESYSRALESLASNIIARIDDLLYVDDLTKQSDDNNLLSSPAVSSII 488

Query: 224 Q----FPVPF----SSSPF-----TKPSFSAVDLVTLAKGGTRSP 254
                 P+P+    S +P+     T P FS   +++  KG  R+P
Sbjct: 489 AHKKVVPLPYLISASGTPYRTSFSTTPGFSP-SMISPKKGERRTP 532

[Close]

BLAST of Cp4.1LG08g11990 vs. TAIR 10
Match: AT4G38430.1 (rho guanyl-nucleotide exchange factor 1 )

HSP 1 Score: 66.6 bits (161), Expect = 3.4e-11
Identity = 46/111 (41.44%), Postives = 65/111 (58.56%), Query Frame = 0


Query: 168 QDVGKAILESYSRVLESLAFNIVARIDDLVYVDDLTKHS----DQIPGISQLGVSGRIQF 227
           +DVG++ILESYSRV+ES+AFNI ARIDD++YVDD  + S    + +   S  G++ +  F
Sbjct: 420 KDVGQSILESYSRVMESMAFNITARIDDVLYVDDAMRRSISVTESLSLFSINGLNPQKAF 479

Query: 228 PVPFS--SSPFTKPSFS--------AVDLVTLAKGGTRSPIHKDMVQQPEK 265
            V  S   SPF  P+ S        A  L ++ + GTR    K +V + EK
Sbjct: 480 SVQSSPHGSPFATPALSVASRSPRRAPPLYSVKRNGTR---EKGIVGETEK 527

[Close]

BLAST of Cp4.1LG08g11990 vs. TAIR 10
Match: AT4G00460.2 (RHO guanyl-nucleotide exchange factor 3 )

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-08
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 0


Query: 168 QDVGKAILESYSRVLESLAFNIVARIDDLVYVDDLTKHSD 208
           +DVGKA+LESYSRVLE LAFNIVA IDD++YVD   + S+
Sbjct: 434 KDVGKAVLESYSRVLEGLAFNIVAWIDDVLYVDKTMRGSE 473

[Close]

BLAST of Cp4.1LG08g11990 vs. TAIR 10
Match: AT1G01700.1 (RHO guanyl-nucleotide exchange factor 2 )

HSP 1 Score: 56.2 bits (134), Expect = 4.6e-08
Identity = 27/33 (81.82%), Postives = 31/33 (93.94%), Query Frame = 0


Query: 168 QDVGKAILESYSRVLESLAFNIVARIDDLVYVD 201
           +DVGKA+LESYSRVLE LAFNIVA IDD++YVD
Sbjct: 446 KDVGKAVLESYSRVLEGLAFNIVAWIDDVLYVD 478

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g11990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZN0	1.2e-13	62.34	Rop guanine nucleotide exchange factor 7 OS=Arabidopsis thaliana OX=3702 GN=ROPG...	[more]
F4K295	7.3e-11	35.76	Rop guanine nucleotide exchange factor 5 OS=Arabidopsis thaliana OX=3702 GN=ROPG...	[more]
Q93ZY2	4.8e-10	41.44	Rop guanine nucleotide exchange factor 1 OS=Arabidopsis thaliana OX=3702 GN=ROPG...	[more]
A4IJ27	2.2e-07	70.00	Rop guanine nucleotide exchange factor 3 OS=Arabidopsis thaliana OX=3702 GN=ROPG...	[more]
Q9LQ89	6.4e-07	81.82	Rop guanine nucleotide exchange factor 2 OS=Arabidopsis thaliana OX=3702 GN=ROPG...	[more]

BLAST of Cp4.1LG08g11990 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596384.1	1.39e-147	56.11	Rop guanine nucleotide exchange factor 7, partial [Cucurbita argyrosperma subsp....	[more]
XP_023540059.1	7.13e-133	45.08	rop guanine nucleotide exchange factor 7-like [Cucurbita pepo subsp. pepo]	[more]
KAG6596381.1	8.56e-126	43.56	Rop guanine nucleotide exchange factor 7, partial [Cucurbita argyrosperma subsp....	[more]
XP_022941762.1	8.56e-126	43.56	rop guanine nucleotide exchange factor 7-like [Cucurbita moschata]	[more]
XP_022971231.1	1.33e-119	42.54	rop guanine nucleotide exchange factor 7-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG08g11990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FND9	4.14e-126	43.56	rop guanine nucleotide exchange factor 7-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1I2R8	6.45e-120	42.54	rop guanine nucleotide exchange factor 7-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1CWY5	1.26e-42	53.43	rop guanine nucleotide exchange factor 7-like isoform X2 OS=Momordica charantia ...	[more]
A0A6J1CV30	1.61e-42	53.43	rop guanine nucleotide exchange factor 7-like isoform X1 OS=Momordica charantia ...	[more]
A0A5D3DP03	7.37e-37	49.75	Rop guanine nucleotide exchange factor 7-like OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Cp4.1LG08g11990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02010.1	8.6e-15	62.34	RHO guanyl-nucleotide exchange factor 7	[more]
AT5G05940.1	5.2e-12	35.76	ROP guanine nucleotide exchange factor 5	[more]
AT4G38430.1	3.4e-11	41.44	rho guanyl-nucleotide exchange factor 1	[more]
AT4G00460.2	1.6e-08	70.00	RHO guanyl-nucleotide exchange factor 3	[more]
AT1G01700.1	4.6e-08	81.82	RHO guanyl-nucleotide exchange factor 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005512	PRONE domain	PFAM	PF03759	PRONE	coord: 167..204 e-value: 1.9E-14 score: 53.3
IPR005512	PRONE domain	PROSITE	PS51334	PRONE	coord: 1..210 score: 14.250391
None	No IPR available	GENE3D	1.20.58.2010	PRONE domain, subdomain 1	coord: 127..210 e-value: 1.3E-14 score: 56.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..145
None	No IPR available	PANTHER	PTHR33101:SF1	ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 5	coord: 168..256
IPR038937	Rop guanine nucleotide exchange factor	PANTHER	PTHR33101	ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1	coord: 168..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g11990.1	Cp4.1LG08g11990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005085	guanyl-nucleotide exchange factor activity