Cp4.1LG08g06880 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g06880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	50S ribosomal protein L25
Location	Cp4.1LG08: 5222606 .. 5225589 (-)
RNA-Seq Expression	Cp4.1LG08g06880
Synteny	Cp4.1LG08g06880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTAATTAGCATTTTTTTTAAAAAAAATGAAATTTAAACCGAAATGGAAAAGGCCTGTTAGCCCACAGCCCATATTGTGAAAAAAAAGCCGGAAAGAAGGGAGTACATCTTAACCCGCAGGTTCAGTCGACAACTCCAGCCGCCTCACCTCAAACTCTCGCTCTTATTTCACTCCAACGGCGACGGCACCAGCAGCCTGCGGCGAAGTCTCTGTCTCTGTCTCTGCAACCTCTACGGCCGTCTCGACGGAACTCACCTTCTACGAATTGACCTAAATCGGTACAATACCCCTTCAGATTTCTCCACTAAAACCCTCCCTTAAGCCCTTCCGTTCATCCTTCTCCGCCCAATGCTACGCTTCTACCACTCCCCTACTCTCTCAAGAGTCCTCCTCCTCCGGAGGTTTTCCTCCGCTGCCACCGCCACCGCTCCACCCCTTGATTCCGATCCCGAACCTTCATTTTCGTACTTGGAGGGTTTTCCGAAGCCAGATCCGAAGTACGCCGAGACAATCCTCGCCATTCCGCGCTCCATCTCCGGAAAGAACATTTCCGCTAAAGAGCGCAAGGTTGGCCGCGTTCCAAGCATCGTGTTCGAGCAAGAGGACGGTCAGCATGGCGGAAATAAGCGTCTCATATCTGTACGGACTAATCAAATTAGGAAGCTTGTAAATCATCTAGGTCGCTCTTTCTTCCTCTCCAGGCTTTTTGATCTCGAAGTTCGGTCCGAGTTCGAATCCGGGGATATTGTTGAGAAGGTTCGGGTCTTACCTCGGAAGGTACTCTATTATCTTGTCTGTAAGGACTAAATTTCGCTTAGGAACTTTCATGAAATTTCNCCTACCTCGGAAGGTACTCTATTATCTCGTCCTGTAAGGACTAAATTTCGCTTAGGAACTTTCATGAAATTTCCAACTTATTGAGTTTATGAGATGATTTATGAGGAGGATTAGAATAATTGATTGTTTCATGGTCGTAAAGGAGCTGAAAGCATTGTGCACACTGTAGTTTCAATGATCATTATATTTCATGTATATGTTTTGATTAATCAGAAGATAAGAAGATGGGTTTAGTTCAATTTTGATCATAAGTTAGTGTAAGATCTTGTGAGAATACATATAATATAATACCCATTCTGAACTTGCCCCATTCATGTTTGTTCAGATTCATCTTCATGCGGGAACAGATGCACCACTTAATGTTACTTTCATAAGGGCACCTTCACACGCTTTATTAAAAGTTGATGTACCTCTTGTTTTCCGAGGGGAAGATGTATGCCCTGGATTGAGGAAAGGTACTGCTGCAAGACTAAGTTCCTTTTATTTGATTTTCTTTAAAGTCTATAAATGTTATGCAGTAATTTATAAGATTTGAAGATATAATAGCTTTTTGTTCGGGTGGGATTTTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACACCCTTTATAAGAGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGAGAAGCCTAAAGAGAACAATATTTGCTTGTGGTGGGCTTGGGTTGTTATAAATGGTATTATAGCCAGACACCGGGAGATGTGCGAGCGAGAAGGTTGAGCTCCCCGAAGGGGGTGGACACGGGGCGGTGTGCCAGCAAGAACGCTGAATCCCGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGTAGGGCATTTTTGTTTGTACTCCTTTTCTCATTACAAAAAATTCAGAAAAGGAAGTACTTGCATCTTGTTTCTGCATTCGTACTTTCTGAAAAGTTTCTGGTTTTCTTAAAAATGTTCTGGCATTCCTACGAAAAAATTGCGGGCGTCGATCCTGATTATGTTATCTTCAAAGGAGAGAACAATTATATTCTTACTCCTTTAGTGAACATTTTTCTAATGTTTGAAAAATTCTACAGGATCTTATTTGAATACAATTAAGAGGACAGTTAAATACCTTTGCCCTGCTGATATTGTTCCTCCATATATCGATGTCGATCTTAGCGAGTTAGATGTTGGGCAAAAGTTGGTTACGGGTGACCTCAAGGTTCATCCTGCGTTAAAGCTTCTTCGGTCAAAGGACGAGCCTGTTTGTAAGATTGCAGGAGCCCGAGCTTCCGATCAACAAAAGAAATCAAAGTAACTCTGGACTATCAATATCTTAGTTGCTTGGACATTAAAGCTTCTTCTGTTAAAGAAGACGATGTTTGTAAGATTATGGGATCCAGGATTTCATGATCAGTCAAGAAATCTTAATAAATCCCTCCAGATTTTGGTCACCATCGGTTTTAATTTTTTTCTCCCAATACTTCAGAAAGCAATGTACGTTGTTTGTTGTTGGTTCACTAGCATTTATTTGATCTCTCTGTTCACGGAATGCTTGAACTCTGATGAGCAAGAATATTATGATAACTTTTTAGAGGGAGTTTTTAGCTTAATTGGAGGAGGCATTTGTAACATATTATACATTATCTCCTTGAAATTGGTTTCCCGTTGCATTGGATAATGTTATTCAAGGGGCAAATGTTATTGGTTCCTAAA

mRNA sequence

TATTTAATTAGCATTTTTTTTAAAAAAAATGAAATTTAAACCGAAATGGAAAAGGCCTGTTAGCCCACAGCCCATATTGTGAAAAAAAAGCCGGAAAGAAGGGAGTACATCTTAACCCGCAGGTTCAGTCGACAACTCCAGCCGCCTCACCTCAAACTCTCGCTCTTATTTCACTCCAACGGCGACGGCACCAGCAGCCTGCGGCGAAGTCTCTGTCTCTGTCTCTGCAACCTCTACGGCCGTCTCGACGGAACTCACCTTCTACGAATTGACCTAAATCGGTACAATACCCCTTCAGATTTCTCCACTAAAACCCTCCCTTAAGCCCTTCCGTTCATCCTTCTCCGCCCAATGCTACGCTTCTACCACTCCCCTACTCTCTCAAGAGTCCTCCTCCTCCGGAGGTTTTCCTCCGCTGCCACCGCCACCGCTCCACCCCTTGATTCCGATCCCGAACCTTCATTTTCGTACTTGGAGGGTTTTCCGAAGCCAGATCCGAAGTACGCCGAGACAATCCTCGCCATTCCGCGCTCCATCTCCGGAAAGAACATTTCCGCTAAAGAGCGCAAGGTTGGCCGCGTTCCAAGCATCGTGTTCGAGCAAGAGGACGGTCAGCATGGCGGAAATAAGCGTCTCATATCTGTACGGACTAATCAAATTAGGAAGCTTGTAAATCATCTAGGTCGCTCTTTCTTCCTCTCCAGGCTTTTTGATCTCGAAGTTCGGTCCGAGTTCGAATCCGGGGATATTGTTGAGAAGGTTCGGGTCTTACCTCGGAAGATTCATCTTCATGCGGGAACAGATGCACCACTTAATGTTACTTTCATAAGGGCACCTTCACACGCTTTATTAAAAGTTGATGTACCTCTTGTTTTCCGAGGGGAAGATGTATGCCCTGGATTGAGGAAAGGATCTTATTTGAATACAATTAAGAGGACAGTTAAATACCTTTGCCCTGCTGATATTGTTCCTCCATATATCGATGTCGATCTTAGCGAGTTAGATGTTGGGCAAAAGTTGGTTACGGGTGACCTCAAGGTTCATCCTGCGTTAAAGCTTCTTCGGTCAAAGGACGAGCCTGTTTGTAAGATTGCAGGAGCCCGAGCTTCCGATCAACAAAAGAAATCAAAGTAACTCTGGACTATCAATATCTTAGTTGCTTGGACATTAAAGCTTCTTCTGTTAAAGAAGACGATGTTTGTAAGATTATGGGATCCAGGATTTCATGATCAGTCAAGAAATCTTAATAAATCCCTCCAGATTTTGGTCACCATCGGTTTTAATTTTTTTCTCCCAATACTTCAGAAAGCAATGTACGTTGTTTGTTGTTGGTTCACTAGCATTTATTTGATCTCTCTGTTCACGGAATGCTTGAACTCTGATGAGCAAGAATATTATGATAACTTTTTAGAGGGAGTTTTTAGCTTAATTGGAGGAGGCATTTGTAACATATTATACATTATCTCCTTGAAATTGGTTTCCCGTTGCATTGGATAATGTTATTCAAGGGGCAAATGTTATTGGTTCCTAAA

Coding sequence (CDS)

ATGCTACGCTTCTACCACTCCCCTACTCTCTCAAGAGTCCTCCTCCTCCGGAGGTTTTCCTCCGCTGCCACCGCCACCGCTCCACCCCTTGATTCCGATCCCGAACCTTCATTTTCGTACTTGGAGGGTTTTCCGAAGCCAGATCCGAAGTACGCCGAGACAATCCTCGCCATTCCGCGCTCCATCTCCGGAAAGAACATTTCCGCTAAAGAGCGCAAGGTTGGCCGCGTTCCAAGCATCGTGTTCGAGCAAGAGGACGGTCAGCATGGCGGAAATAAGCGTCTCATATCTGTACGGACTAATCAAATTAGGAAGCTTGTAAATCATCTAGGTCGCTCTTTCTTCCTCTCCAGGCTTTTTGATCTCGAAGTTCGGTCCGAGTTCGAATCCGGGGATATTGTTGAGAAGGTTCGGGTCTTACCTCGGAAGATTCATCTTCATGCGGGAACAGATGCACCACTTAATGTTACTTTCATAAGGGCACCTTCACACGCTTTATTAAAAGTTGATGTACCTCTTGTTTTCCGAGGGGAAGATGTATGCCCTGGATTGAGGAAAGGATCTTATTTGAATACAATTAAGAGGACAGTTAAATACCTTTGCCCTGCTGATATTGTTCCTCCATATATCGATGTCGATCTTAGCGAGTTAGATGTTGGGCAAAAGTTGGTTACGGGTGACCTCAAGGTTCATCCTGCGTTAAAGCTTCTTCGGTCAAAGGACGAGCCTGTTTGTAAGATTGCAGGAGCCCGAGCTTCCGATCAACAAAAGAAATCAAAGTAA

Protein sequence

MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSKDEPVCKIAGARASDQQKKSK

Homology

[Close]

BLAST of Cp4.1LG08g06880 vs. ExPASy Swiss-Prot
Match: Q219F9 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain BisB18) OX=316056 GN=rplY PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.9e-20
Identity = 61/187 (32.62%), Postives = 99/187 (52.94%), Query Frame = 0


Query: 57  AIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKR--LISVRTNQIRKLVNHLGRSF 116
           A  R   GK  +  ER+ GRVP +++       G NK    ISV   ++R  +   GR  
Sbjct: 9   ATARPAGGKGAARAERRAGRVPGVIY-------GDNKPPVTISVDDTELRARI-LAGR-- 68

Query: 117 FLSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLV 176
           FL+ +FD+E+          +K RV+PR  HL    D P++V F+R    AL++V VPL 
Sbjct: 69  FLTTIFDVELDG--------QKHRVIPRDFHLDPVRDFPIHVDFLRLGEGALIRVSVPLH 128

Query: 177 FRGEDVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPAL 236
            +  +  PG+++G  +N +  TV+    A+ +P +I+ D+S+LD+G  L   D+ +   +
Sbjct: 129 LKNAEGAPGVKRGGTVNIVTHTVELEAEAESIPQFIEADVSQLDIGSSLHLSDVVLPKGV 177

Query: 237 KLLRSKD 242
           K L  +D
Sbjct: 189 KTLSRED 177

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BLAST of Cp4.1LG08g06880 vs. ExPASy Swiss-Prot
Match: Q3SPM6 (50S ribosomal protein L25 OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=rplY PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-19
Identity = 60/188 (31.91%), Postives = 99/188 (52.66%), Query Frame = 0


Query: 57  AIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNK---RLISVRTNQIRKLVNHLGRS 116
           A  R  SGK  +  ER+ GRVP++++        GNK   + ISV   ++R+ +   GR 
Sbjct: 9   ATARPKSGKGAARAERRAGRVPAVIY--------GNKQPPQPISVEEPELRQRI-LAGR- 68

Query: 117 FFLSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPL 176
            FL+ +FD+ +          +K RV+PR  HL    D P++V F+R    A ++V VPL
Sbjct: 69  -FLTTIFDINLDG--------KKHRVIPRDFHLDPVKDFPIHVDFMRLGEGATIRVSVPL 128

Query: 177 VFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPA 236
                DV PG+++G  +N +   +   C A+ +P +I+ D+  L++   L   DL++ P 
Sbjct: 129 RLLKADVAPGVKRGGTVNLVTHAIDVECAAESIPQFIEADVGALEISHSLHLSDLQLPPG 177

Query: 237 LKLLRSKD 242
           +K L  +D
Sbjct: 189 VKPLARED 177

[Close]

BLAST of Cp4.1LG08g06880 vs. ExPASy Swiss-Prot
Match: Q6N1P8 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) OX=258594 GN=rplY PE=1 SV=3)

HSP 1 Score: 97.1 bits (240), Expect = 3.2e-19
Identity = 58/201 (28.86%), Postives = 102/201 (50.75%), Query Frame = 0


Query: 57  AIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFL 116
           A  R  SGK  +  ER+ GRVP +++       G N+  + +   + ++L   +    FL
Sbjct: 9   ATARPKSGKGAARAERRAGRVPGVIY-------GDNQSPLPISVEE-KELRLRILAGRFL 68

Query: 117 SRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFR 176
           + +FD+ +          +K RV+PR  HL    D P++V F+R  + A ++V VPL  +
Sbjct: 69  TTVFDVVLDG--------KKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLK 128

Query: 177 GEDVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKL 236
           G +V PG+++G   N +  TV+   PA+ +P +I+ D+S LD+G  L   D+ +   +K 
Sbjct: 129 GLEVAPGVKRGGTFNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVKS 188

Query: 237 LRSKDEPVCKIAGARASDQQK 258
           +   D  +  I      ++ K
Sbjct: 189 VSRDDVTLVTIVPPSGYNEDK 193

[Close]

BLAST of Cp4.1LG08g06880 vs. ExPASy Swiss-Prot
Match: B3Q7X4 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain TIE-1) OX=395960 GN=rplY PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.2e-19
Identity = 58/201 (28.86%), Postives = 102/201 (50.75%), Query Frame = 0


Query: 57  AIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFL 116
           A  R  SGK  +  ER+ GRVP +++       G N+  + +   + ++L   +    FL
Sbjct: 9   ATARPKSGKGAARAERRAGRVPGVIY-------GDNQSPLPISVEE-KELRLRILAGRFL 68

Query: 117 SRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFR 176
           + +FD+ +          +K RV+PR  HL    D P++V F+R  + A ++V VPL  +
Sbjct: 69  TTVFDVVLDG--------KKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLK 128

Query: 177 GEDVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKL 236
           G +V PG+++G   N +  TV+   PA+ +P +I+ D+S LD+G  L   D+ +   +K 
Sbjct: 129 GLEVAPGVKRGGTFNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVKS 188

Query: 237 LRSKDEPVCKIAGARASDQQK 258
           +   D  +  I      ++ K
Sbjct: 189 VSRDDVTLVTIVPPSGYNEDK 193

[Close]

BLAST of Cp4.1LG08g06880 vs. ExPASy Swiss-Prot
Match: Q131L9 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain BisB5) OX=316057 GN=rplY PE=3 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 9.4e-19
Identity = 62/205 (30.24%), Postives = 106/205 (51.71%), Query Frame = 0


Query: 57  AIPRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNK--RLISVRTNQIRKLVNHLGRSF 116
           A  R  SGK  +  ER+ GRVP +++       G N+    ISV   ++R  +   GR  
Sbjct: 9   ATARPKSGKGAARAERRAGRVPGVIY-------GDNQPPLPISVEDKELRLRI-LAGR-- 68

Query: 117 FLSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLV 176
           FL+ +FD+ +          +K RV+PR  HL    D P++V F+R  + A ++V VPL 
Sbjct: 69  FLTTVFDVVLDG--------KKHRVIPRDYHLDPVKDFPIHVDFLRLGAGATIRVSVPLH 128

Query: 177 FRGEDVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPAL 236
            +G +  PG+++G   N +  TV    PA+ +P +I+ D+S LD+G  L   D+ +   +
Sbjct: 129 LKGLESAPGVKRGGTFNIVTHTVDLEAPAESIPQFIEADVSTLDIGVSLHLSDIALPNGV 188

Query: 237 KLLRSKDEPVCKIAGARASDQQKKS 260
           K +  +D  +  I      ++++K+
Sbjct: 189 KSVSREDVTLVTIVPPSGFNEEQKA 195

[Close]

BLAST of Cp4.1LG08g06880 vs. NCBI nr
Match: XP_023538842.1 (uncharacterized protein LOC111799648 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 514 bits (1325), Expect = 6.81e-184
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR
Sbjct: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60

Query: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120
           SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF
Sbjct: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
           DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240
           CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240

Query: 241 DEPVCKIAGARASDQQKKSK 260
           DEPVCKIAGARASDQQKKSK
Sbjct: 241 DEPVCKIAGARASDQQKKSK 260

[Close]

BLAST of Cp4.1LG08g06880 vs. NCBI nr
Match: XP_022950760.1 (uncharacterized protein LOC111453766 [Cucurbita moschata] >KAG6596970.1 hypothetical protein SDJN03_10150, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028444.1 rplY [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 513 bits (1322), Expect = 1.95e-183
Identity = 259/260 (99.62%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR
Sbjct: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60

Query: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120
           SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF
Sbjct: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
           DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240
           CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240

Query: 241 DEPVCKIAGARASDQQKKSK 260
           DEPVCKIAGARASDQQ+KSK
Sbjct: 241 DEPVCKIAGARASDQQRKSK 260

[Close]

BLAST of Cp4.1LG08g06880 vs. NCBI nr
Match: XP_022973342.1 (uncharacterized protein LOC111471898 [Cucurbita maxima] >XP_022975177.1 uncharacterized protein LOC111474217 [Cucurbita maxima])

HSP 1 Score: 504 bits (1299), Expect = 6.27e-180
Identity = 253/260 (97.31%), Postives = 258/260 (99.23%), Query Frame = 0


Query: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPK+AETILAIPR
Sbjct: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKFAETILAIPR 60

Query: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120
           SISGKNISAKERKVGR PSIVFEQEDGQHGGNKRLISVRTNQ+RKLVNHLGRSFFLSRLF
Sbjct: 61  SISGKNISAKERKVGRTPSIVFEQEDGQHGGNKRLISVRTNQVRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
           DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240
           CPGLRKGSYLNTIKRTVKYLCPADIVPP+IDVDLSELDVGQKLV GDLKVHPALKLL+SK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPFIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240

Query: 241 DEPVCKIAGARASDQQKKSK 260
           DEPVCKIAGARASDQQ+KSK
Sbjct: 241 DEPVCKIAGARASDQQRKSK 260

[Close]

BLAST of Cp4.1LG08g06880 vs. NCBI nr
Match: XP_038903089.1 (50S ribosomal protein L25 [Benincasa hispida])

HSP 1 Score: 477 bits (1228), Expect = 3.60e-169
Identity = 247/260 (95.00%), Postives = 249/260 (95.77%), Query Frame = 0


Query: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLRFYHSPTLSRVL  RRFSSAATA  P LDS  EP  SYLEGFPKPDPKYAETILAIPR
Sbjct: 1   MLRFYHSPTLSRVL--RRFSSAATA--PVLDSYSEPPLSYLEGFPKPDPKYAETILAIPR 60

Query: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120
           SISGKNISAKERKVGR PSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF
Sbjct: 61  SISGKNISAKERKVGRTPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
           DLEVRSEFESGDIVEKVRVLPRKIHLH+GTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHSGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240
           CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLV GDLKVHPALKLL+SK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240

Query: 241 DEPVCKIAGARASDQQKKSK 260
           DEPVCKIAGARASDQQKKSK
Sbjct: 241 DEPVCKIAGARASDQQKKSK 256

[Close]

BLAST of Cp4.1LG08g06880 vs. NCBI nr
Match: XP_022147798.1 (uncharacterized protein LOC111016648 [Momordica charantia])

HSP 1 Score: 473 bits (1217), Expect = 1.84e-167
Identity = 237/260 (91.15%), Postives = 247/260 (95.00%), Query Frame = 0


Query: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLRFYHSPTL+RVLLLRRFSSAATA    LDSDPEP FSYLE  P+PDPKYAETILA+PR
Sbjct: 1   MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPR 60

Query: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120
           SISGKNISAKERK GR PSIVFEQEDGQHGGNKRLISV TNQIRKLVNHLGRSFFLSRLF
Sbjct: 61  SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
           DLEVR EFESG+I+EKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPL+FRGEDV
Sbjct: 121 DLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240
           CPGLRKGSYLNTIK+TVKYLCPADI+PPYIDVDLSELDVGQKLV GDLKVHPALKLL+SK
Sbjct: 181 CPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240

Query: 241 DEPVCKIAGARASDQQKKSK 260
           DEPVCKIAGAR SDQQ+KSK
Sbjct: 241 DEPVCKIAGARVSDQQRKSK 258

[Close]

BLAST of Cp4.1LG08g06880 vs. ExPASy TrEMBL
Match: A0A6J1GGM6 (uncharacterized protein LOC111453766 OS=Cucurbita moschata OX=3662 GN=LOC111453766 PE=4 SV=1)

HSP 1 Score: 513 bits (1322), Expect = 9.46e-184
Identity = 259/260 (99.62%), Postives = 260/260 (100.00%), Query Frame = 0


Query: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR
Sbjct: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60

Query: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120
           SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF
Sbjct: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
           DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240
           CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240

Query: 241 DEPVCKIAGARASDQQKKSK 260
           DEPVCKIAGARASDQQ+KSK
Sbjct: 241 DEPVCKIAGARASDQQRKSK 260

[Close]

BLAST of Cp4.1LG08g06880 vs. ExPASy TrEMBL
Match: A0A6J1ICC4 (uncharacterized protein LOC111471898 OS=Cucurbita maxima OX=3661 GN=LOC111474217 PE=4 SV=1)

HSP 1 Score: 504 bits (1299), Expect = 3.04e-180
Identity = 253/260 (97.31%), Postives = 258/260 (99.23%), Query Frame = 0


Query: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPK+AETILAIPR
Sbjct: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKFAETILAIPR 60

Query: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120
           SISGKNISAKERKVGR PSIVFEQEDGQHGGNKRLISVRTNQ+RKLVNHLGRSFFLSRLF
Sbjct: 61  SISGKNISAKERKVGRTPSIVFEQEDGQHGGNKRLISVRTNQVRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
           DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV
Sbjct: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240
           CPGLRKGSYLNTIKRTVKYLCPADIVPP+IDVDLSELDVGQKLV GDLKVHPALKLL+SK
Sbjct: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPFIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240

Query: 241 DEPVCKIAGARASDQQKKSK 260
           DEPVCKIAGARASDQQ+KSK
Sbjct: 241 DEPVCKIAGARASDQQRKSK 260

[Close]

BLAST of Cp4.1LG08g06880 vs. ExPASy TrEMBL
Match: A0A6J1D2A7 (uncharacterized protein LOC111016648 OS=Momordica charantia OX=3673 GN=LOC111016648 PE=4 SV=1)

HSP 1 Score: 473 bits (1217), Expect = 8.91e-168
Identity = 237/260 (91.15%), Postives = 247/260 (95.00%), Query Frame = 0


Query: 1   MLRFYHSPTLSRVLLLRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPR 60
           MLRFYHSPTL+RVLLLRRFSSAATA    LDSDPEP FSYLE  P+PDPKYAETILA+PR
Sbjct: 1   MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPR 60

Query: 61  SISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLF 120
           SISGKNISAKERK GR PSIVFEQEDGQHGGNKRLISV TNQIRKLVNHLGRSFFLSRLF
Sbjct: 61  SISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLF 120

Query: 121 DLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDV 180
           DLEVR EFESG+I+EKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPL+FRGEDV
Sbjct: 121 DLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLMFRGEDV 180

Query: 181 CPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSK 240
           CPGLRKGSYLNTIK+TVKYLCPADI+PPYIDVDLSELDVGQKLV GDLKVHPALKLL+SK
Sbjct: 181 CPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSK 240

Query: 241 DEPVCKIAGARASDQQKKSK 260
           DEPVCKIAGAR SDQQ+KSK
Sbjct: 241 DEPVCKIAGARVSDQQRKSK 258

[Close]

BLAST of Cp4.1LG08g06880 vs. ExPASy TrEMBL
Match: A0A5D3DPH9 (50S ribosomal protein L25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007100 PE=4 SV=1)

HSP 1 Score: 464 bits (1194), Expect = 3.30e-164
Identity = 238/262 (90.84%), Postives = 246/262 (93.89%), Query Frame = 0


Query: 1   MLRFYHSPTLSRVLLLRRFSSAATATA--PPLDSDPEPSFSYLEGFPKPDPKYAETILAI 60
           MLRFYHSPTLSRVLL RRFSSAATA A  P LDS  EP FSYLEGFPKPDPKYAETILAI
Sbjct: 1   MLRFYHSPTLSRVLLHRRFSSAATAIATDPALDSVSEPLFSYLEGFPKPDPKYAETILAI 60

Query: 61  PRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSR 120
           PRS SGK I AKERKVGRVPSI+FEQEDGQHGGNKRLISVRTNQI KLV +LGRSFFLSR
Sbjct: 61  PRSTSGKTICAKERKVGRVPSILFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSR 120

Query: 121 LFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGE 180
           LFDLEV S+FESGDIVEKVRVLPR+IHLHAGTDAPLNVTFIRAPSHA+LKVDVPLVFRGE
Sbjct: 121 LFDLEVLSDFESGDIVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGE 180

Query: 181 DVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLR 240
           DVCPGLRKGSYLNTIKRTVKYLCPADI+PPYIDVDLSELDVGQKLV GDLKVHPALKL++
Sbjct: 181 DVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVK 240

Query: 241 SKDEPVCKIAGARASDQQKKSK 260
           SKDEPVCKIAGAR SDQQKKSK
Sbjct: 241 SKDEPVCKIAGARVSDQQKKSK 262

[Close]

BLAST of Cp4.1LG08g06880 vs. ExPASy TrEMBL
Match: A0A1S3B7N9 (50S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103486925 PE=4 SV=1)

HSP 1 Score: 464 bits (1194), Expect = 3.30e-164
Identity = 238/262 (90.84%), Postives = 246/262 (93.89%), Query Frame = 0


Query: 1   MLRFYHSPTLSRVLLLRRFSSAATATA--PPLDSDPEPSFSYLEGFPKPDPKYAETILAI 60
           MLRFYHSPTLSRVLL RRFSSAATA A  P LDS  EP FSYLEGFPKPDPKYAETILAI
Sbjct: 1   MLRFYHSPTLSRVLLHRRFSSAATAIATDPALDSVSEPLFSYLEGFPKPDPKYAETILAI 60

Query: 61  PRSISGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSR 120
           PRS SGK I AKERKVGRVPSI+FEQEDGQHGGNKRLISVRTNQI KLV +LGRSFFLSR
Sbjct: 61  PRSTSGKTICAKERKVGRVPSILFEQEDGQHGGNKRLISVRTNQIVKLVKNLGRSFFLSR 120

Query: 121 LFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGE 180
           LFDLEV S+FESGDIVEKVRVLPR+IHLHAGTDAPLNVTFIRAPSHA+LKVDVPLVFRGE
Sbjct: 121 LFDLEVLSDFESGDIVEKVRVLPRQIHLHAGTDAPLNVTFIRAPSHAVLKVDVPLVFRGE 180

Query: 181 DVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLR 240
           DVCPGLRKGSYLNTIKRTVKYLCPADI+PPYIDVDLSELDVGQKLV GDLKVHPALKL++
Sbjct: 181 DVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLVK 240

Query: 241 SKDEPVCKIAGARASDQQKKSK 260
           SKDEPVCKIAGAR SDQQKKSK
Sbjct: 241 SKDEPVCKIAGARVSDQQKKSK 262

[Close]

BLAST of Cp4.1LG08g06880 vs. TAIR 10
Match: AT4G23620.1 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 375.2 bits (962), Expect = 4.3e-104
Identity = 185/244 (75.82%), Postives = 214/244 (87.70%), Query Frame = 0


Query: 16  LRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPRSISGKNISAKERKVG 75
           LR FS AA A A  LD   E   +YL GFP+PDPK+AETILA+PRS+SGK+ISAKERK G
Sbjct: 16  LRLFSPAANA-ALSLDHIQETQLTYLPGFPRPDPKHAETILAVPRSVSGKSISAKERKAG 75

Query: 76  RVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVRSEFESGDIVE 135
           RVPSI+FEQEDGQHGGNKRLISV+TNQIRKLVNHLG SFFLSRLFD+EVR+E  S +++E
Sbjct: 76  RVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFLSRLFDVEVRAEIGSDEVIE 135

Query: 136 KVRVLPRKIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDVCPGLRKGSYLNTIKR 195
           KVR LPR IHLH+GTDAPLNVTFIRAP  ALLKVD+PLVF G+DV PGL+KG+ LNTIKR
Sbjct: 136 KVRALPRAIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSPGLKKGASLNTIKR 195

Query: 196 TVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSKDEPVCKIAGARASDQ 255
           TVK+LCPA+I+PPYI+VDLS+LD+GQKLV GDLKVHPALKL++SKDEP+ K+AG R +D 
Sbjct: 196 TVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPALKLIKSKDEPIVKVAGGRVTDT 255

Query: 256 QKKS 260
           QKKS
Sbjct: 256 QKKS 258

[Close]

BLAST of Cp4.1LG08g06880 vs. TAIR 10
Match: AT4G23620.2 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 368.2 bits (944), Expect = 5.3e-102
Identity = 186/257 (72.37%), Postives = 215/257 (83.66%), Query Frame = 0


Query: 16  LRRFSSAATATAPPLDSDPEPSFSYLEGFPKPDPKYAETILAIPRSISGKNISAKERKVG 75
           LR FS AA A A  LD   E   +YL GFP+PDPK+AETILA+PRS+SGK+ISAKERK G
Sbjct: 16  LRLFSPAANA-ALSLDHIQETQLTYLPGFPRPDPKHAETILAVPRSVSGKSISAKERKAG 75

Query: 76  RVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHLGRSFFLSRLFDLEVRSEFESGDIVE 135
           RVPSI+FEQEDGQHGGNKRLISV+TNQIRKLVNHLG SFFLSRLFD+EVR+E  S +++E
Sbjct: 76  RVPSIIFEQEDGQHGGNKRLISVQTNQIRKLVNHLGYSFFLSRLFDVEVRAEIGSDEVIE 135

Query: 136 KVRVLPR-------------KIHLHAGTDAPLNVTFIRAPSHALLKVDVPLVFRGEDVCP 195
           KVR LPR             KIHLH+GTDAPLNVTFIRAP  ALLKVD+PLVF G+DV P
Sbjct: 136 KVRALPRAVKSPFLSLMKLIKIHLHSGTDAPLNVTFIRAPPGALLKVDIPLVFIGDDVSP 195

Query: 196 GLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTGDLKVHPALKLLRSKDE 255
           GL+KG+ LNTIKRTVK+LCPA+I+PPYI+VDLS+LD+GQKLV GDLKVHPALKL++SKDE
Sbjct: 196 GLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGDLKVHPALKLIKSKDE 255

Query: 256 PVCKIAGARASDQQKKS 260
           P+ K+AG R +D QKKS
Sbjct: 256 PIVKVAGGRVTDTQKKS 271

[Close]

BLAST of Cp4.1LG08g06880 vs. TAIR 10
Match: AT5G66860.1 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 166.0 bits (419), Expect = 4.0e-41
Identity = 90/203 (44.33%), Postives = 130/203 (64.04%), Query Frame = 0


Query: 53  ETILAIPRSISGKNISAKERKVGRVPSIVFEQE----DGQHGG--NKRLISVRTNQIRKL 112
           +TI AIPR  +G+ +SA++R +GR+P++VF Q     D    G   K+L++    QI+ +
Sbjct: 34  QTIQAIPREATGRGVSARDRTIGRIPAVVFPQSLLDTDASKRGVSRKQLLTADKKQIKSI 93

Query: 113 VNHLGRSFFLSRLFDLEVRSEFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSHAL 172
           ++ +G  FF S  F L++R+   S  +VE  RVLP K+H    T   LN+ F+ A     
Sbjct: 94  IDSVGLPFFCSTTFQLQIRAGQGSSTLVESGRVLPLKVHRDEETGKILNLVFVWADDGEK 153

Query: 173 LKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVTG 232
           LKVDVP+VF+G D CPGL+KG  L TI+ T+K L PA+ +P  I+VD+S LD+  K++  
Sbjct: 154 LKVDVPVVFKGLDHCPGLQKGGNLRTIRSTLKLLGPAEHIPSKIEVDVSNLDIEDKVLLQ 213

Query: 233 DLKVHPALKLLRSKDE--PVCKI 248
           D+  HP+LKLL SK+E  PVCKI
Sbjct: 214 DVVFHPSLKLL-SKNETMPVCKI 235

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g06880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q219F9	2.9e-20	32.62	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain BisB18) OX=31605...	[more]
Q3SPM6	1.1e-19	31.91	50S ribosomal protein L25 OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 1...	[more]
Q6N1P8	3.2e-19	28.86	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CG...	[more]
B3Q7X4	3.2e-19	28.86	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain TIE-1) OX=395960...	[more]
Q131L9	9.4e-19	30.24	50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain BisB5) OX=316057...	[more]

BLAST of Cp4.1LG08g06880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538842.1	6.81e-184	100.00	uncharacterized protein LOC111799648 [Cucurbita pepo subsp. pepo]	[more]
XP_022950760.1	1.95e-183	99.62	uncharacterized protein LOC111453766 [Cucurbita moschata] >KAG6596970.1 hypothet...	[more]
XP_022973342.1	6.27e-180	97.31	uncharacterized protein LOC111471898 [Cucurbita maxima] >XP_022975177.1 uncharac...	[more]
XP_038903089.1	3.60e-169	95.00	50S ribosomal protein L25 [Benincasa hispida]	[more]
XP_022147798.1	1.84e-167	91.15	uncharacterized protein LOC111016648 [Momordica charantia]	[more]

BLAST of Cp4.1LG08g06880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGM6	9.46e-184	99.62	uncharacterized protein LOC111453766 OS=Cucurbita moschata OX=3662 GN=LOC1114537...	[more]
A0A6J1ICC4	3.04e-180	97.31	uncharacterized protein LOC111471898 OS=Cucurbita maxima OX=3661 GN=LOC111474217...	[more]
A0A6J1D2A7	8.91e-168	91.15	uncharacterized protein LOC111016648 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A5D3DPH9	3.30e-164	90.84	50S ribosomal protein L25 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3B7N9	3.30e-164	90.84	50S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103486925 PE=4 SV=1	[more]

BLAST of Cp4.1LG08g06880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23620.1	4.3e-104	75.82	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]
AT4G23620.2	5.3e-102	72.37	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]
AT5G66860.1	4.0e-41	44.33	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029751	Ribosomal protein L25	PFAM	PF01386	Ribosomal_L25p	coord: 57..158 e-value: 4.3E-9 score: 36.7
IPR029751	Ribosomal protein L25	CDD	cd00495	Ribosomal_L25_TL5_CTC	coord: 54..160 e-value: 2.27951E-12 score: 59.4062
IPR037121	Ribosomal protein L25, C-terminal	GENE3D	2.170.120.20	Ribosomal protein L25, beta domain	coord: 165..256 e-value: 1.1E-16 score: 62.9
IPR020056	Ribosomal protein L25/Gln-tRNA synthetase, N-terminal	GENE3D	2.40.240.10	Ribosomal Protein L25; Chain P	coord: 54..161 e-value: 5.7E-8 score: 34.8
IPR020057	Ribosomal protein L25, beta domain	PFAM	PF14693	Ribosomal_TL5_C	coord: 167..250 e-value: 1.7E-19 score: 69.9
None	No IPR available	PANTHER	PTHR33284:SF4	BNAA01G13300D PROTEIN	coord: 11..258
None	No IPR available	PANTHER	PTHR33284	RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN	coord: 11..258
IPR011035	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily	SUPERFAMILY	50715	Ribosomal protein L25-like	coord: 60..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g06880.1	Cp4.1LG08g06880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome