Cp4.1LG08g06860 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g06860
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	CS domain-containing protein
Location	Cp4.1LG08: 5242268 .. 5243205 (+)
RNA-Seq Expression	Cp4.1LG08g06860
Synteny	Cp4.1LG08g06860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTATGTTCTGCTAATTTTACTGTTTCTTCACATGTTCCAGTCGTGCATTTGATTATCTTTAGCCATTTCTGATTCTGATTATTCGCCATTTGTTGCGCTTAGAACAATGTGACGTTTTATATTCTTTAAGTTGGAATGATGTTTTCTTTTTTCTGGACCGATGCTTGTAGATGATGTCGTCTGTAATATGTTTGAATGGTTGCAAGACTGGTAAATGTGGGTTGAAATGGATGGAGTTGGGGTTTTGATCGCCTTGGTAGAAGAAGGTAGTAGTCAAGTCATCACCATAGATTTTCTCGTGTATGCAGTAGCCGTAACCCGGAGGTTCTATGGGCTCAGCGTTCTGATAAGCTTTATCTCACTGTTGCTTTACCTGATGCCAAAGATATTTCTGTCAAGTGTGAACCTCACGGGGTTTTCAGCTTCTCAGCGAAGGGGCTGCACGGCGCATCTTTTGACTTCACTTTGGAACTCTTCGGGTCCATAGTGCCTCAGGTGAGCTACTCACTAACATTTTGATGGGTCTATTATTGATCTTACACCATATCTTTTTGTTGAGCATTGTTGGGAGGGAGTCCCACATTGGCTAATTTAGGGAATGATCATGAGTTTATGCTCAAAGTGGACAGTATCATACCATTATGGAGAGTCGTGGTTCTTAGACTACTATATGGGATTTGAACTTTTTAACTTTTAAAAAAAGTGGCATCAATTCTGTGTTATTTTTAGAAGTCCTTTTGCTTAATGCTTATGCATCAGTTCTCTCTTTGCTTGATACAGGGCTGTAAAACTAAGGTTGGTTTGAGGAACATCATTTTCTCTGTACAAAAAGAACAAAAAGGGTGGTGGAAAAGACTGCTGAAAACAGAAGAAAAACCTGCTCCATACTTGAAGGTTGATTGGAGCAAATGGTGTGATGAGGATGAGTCAGAC

mRNA sequence

ATGAGTAGCCGTAACCCGGAGGTTCTATGGGCTCAGCGTTCTGATAAGCTTTATCTCACTGTTGCTTTACCTGATGCCAAAGATATTTCTGTCAAGTGTGAACCTCACGGGGTTTTCAGCTTCTCAGCGAAGGGGCTGCACGGCGCATCTTTTGACTTCACTTTGGAACTCTTCGGGTCCATAGTGCCTCAGGGCTGTAAAACTAAGGTTGGTTTGAGGAACATCATTTTCTCTGTACAAAAAGAACAAAAAGGGTGGTGGAAAAGACTGCTGAAAACAGAAGAAAAACCTGCTCCATACTTGAAGGTTGATTGGAGCAAATGGTGTGATGAGGATGAGTCAGAC

Coding sequence (CDS)

ATGAGTAGCCGTAACCCGGAGGTTCTATGGGCTCAGCGTTCTGATAAGCTTTATCTCACTGTTGCTTTACCTGATGCCAAAGATATTTCTGTCAAGTGTGAACCTCACGGGGTTTTCAGCTTCTCAGCGAAGGGGCTGCACGGCGCATCTTTTGACTTCACTTTGGAACTCTTCGGGTCCATAGTGCCTCAGGGCTGTAAAACTAAGGTTGGTTTGAGGAACATCATTTTCTCTGTACAAAAAGAACAAAAAGGGTGGTGGAAAAGACTGCTGAAAACAGAAGAAAAACCTGCTCCATACTTGAAGGTTGATTGGAGCAAATGGTGTGATGAGGATGAGTCAGAC

Protein sequence

MSSRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAKGLHGASFDFTLELFGSIVPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDESD

Homology

[Close]

BLAST of Cp4.1LG08g06860 vs. ExPASy Swiss-Prot
Match: Q6ID70 (Co-chaperone protein p23-2 OS=Arabidopsis thaliana OX=3702 GN=P23-2 PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 2.6e-45
Identity = 83/111 (74.77%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAKGLHGASFDFTLELFGSIV 62
           SRNPEVLWAQRSDK+YLTVALPDAKDISVKCEP G+FSFSA G  G  F+F+LEL+G I+
Sbjct: 2   SRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIM 61

Query: 63  PQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDE 114
            +  +  VGLRNIIFS+QKE++ WW RLLK+EEKPAPY+KVDW+KWCDEDE
Sbjct: 62  TE-YRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDE 111

[Close]

BLAST of Cp4.1LG08g06860 vs. ExPASy Swiss-Prot
Match: P0C8Z0 (Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_027940 PE=1 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 6.6e-25
Identity = 55/112 (49.11%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSA-KGLHGASFDFTLELFGSI 62
           SR+PEV WAQR DK+Y+TV L DAKD  V  EP GVFSFSA  G  G  ++  LEL   +
Sbjct: 2   SRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDKV 61

Query: 63  VPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDE 114
             +  K  VG+R+I   V+K +  WWK+L++ ++K   ++KVDW KW DED+
Sbjct: 62  NVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDD 113

[Close]

BLAST of Cp4.1LG08g06860 vs. ExPASy Swiss-Prot
Match: Q6YYB0 (Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0359500 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.6e-25
Identity = 55/112 (49.11%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSA-KGLHGASFDFTLELFGSI 62
           SR+PEV WAQR DK+Y+TV L DAKD  V  EP GVFSFSA  G  G  ++  LEL   +
Sbjct: 2   SRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDKV 61

Query: 63  VPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDE 114
             +  K  VG+R+I   V+K +  WWK+L++ ++K   ++KVDW KW DED+
Sbjct: 62  NVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDD 113

[Close]

BLAST of Cp4.1LG08g06860 vs. ExPASy Swiss-Prot
Match: Q9FR62 (Co-chaperone protein p23-1 OS=Brassica napus OX=3708 GN=P23-1 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 5.6e-24
Identity = 54/114 (47.37%), Postives = 70/114 (61.40%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSA-KGLHGASFDFTLELFGSI 62
           SR+P V WAQRSD +Y+TV LPDA+D+ +K EP G F FSA  G     ++  L+L  S+
Sbjct: 2   SRHPTVKWAQRSDWVYITVELPDAEDVKLKLEPEGKFFFSATSGASKTLYEVDLDLLDSV 61

Query: 63  VPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDESD 116
                K  V  R++ + V+K +  WW RL K E K   YLKVDW KW DED+ D
Sbjct: 62  DVNESKASVSSRSVFYLVKKAESKWWNRLTKPEGKHPLYLKVDWDKWVDEDDED 115

[Close]

BLAST of Cp4.1LG08g06860 vs. ExPASy Swiss-Prot
Match: Q8L7U4 (Co-chaperone protein p23-1 OS=Arabidopsis thaliana OX=3702 GN=P23-1 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.9e-20
Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAK-GLHGASFDFTLELFGSI 62
           SR+PEV WA+ ++K++LTV L D KD  V  +P GVF FSAK G     ++  LEL   +
Sbjct: 2   SRHPEVKWAETTEKIFLTVVLADTKDTKVNLDPEGVFDFSAKVGPENHVYELKLELADKV 61

Query: 63  VPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDE 114
             +  K  +G R+I   ++K +   W +LL+  +KP  Y+KVDW KW DED+
Sbjct: 62  NVEESKINIGERSIFCIIEKAEPERWNKLLRV-KKPPHYVKVDWDKWVDEDD 112

[Close]

BLAST of Cp4.1LG08g06860 vs. NCBI nr
Match: XP_023539452.1 (uncharacterized protein At3g03773-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 239 bits (610), Expect = 3.11e-79
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 2   SSRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAKGLHGASFDFTLELFGSI 61
           SSRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAKGLHGASFDFTLELFGSI
Sbjct: 17  SSRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAKGLHGASFDFTLELFGSI 76

Query: 62  VPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDESD 115
           VPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDESD
Sbjct: 77  VPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDESD 130

[Close]

BLAST of Cp4.1LG08g06860 vs. NCBI nr
Match: XP_022934141.1 (uncharacterized protein At3g03773 [Cucurbita moschata] >XP_023526521.1 uncharacterized protein At3g03773-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229 bits (583), Expect = 5.14e-75
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 1   MSSRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAKGLHGASFDFTLELFGS 60
           MSSRNPEVLWAQRSDK+YLTVALPDAKDISVKCEPHG+FSFSAKGL GASFDF+LELFGS
Sbjct: 1   MSSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPHGLFSFSAKGLQGASFDFSLELFGS 60

Query: 61  IVPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDESD 115
           IVP+GCKTKVGLRNII SVQKEQKGWWKRLLKTEEKPAPYLKVDW+KWCDEDESD
Sbjct: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESD 115

[Close]

BLAST of Cp4.1LG08g06860 vs. NCBI nr
Match: XP_022983880.1 (uncharacterized protein At3g03773 [Cucurbita maxima])

HSP 1 Score: 229 bits (583), Expect = 5.14e-75
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 1   MSSRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAKGLHGASFDFTLELFGS 60
           MSSRNPEVLWAQRSDK+YLTVALPDAKDISVKCEPHG+FSFSAKGL GASFDFTLELFGS
Sbjct: 1   MSSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS 60

Query: 61  IVPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDESD 115
           IVP+GCKTKVGLRNII SVQKEQKGWWKRLLK+EEKPAPYLKVDW+KWCDEDESD
Sbjct: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKSEEKPAPYLKVDWNKWCDEDESD 115

[Close]

BLAST of Cp4.1LG08g06860 vs. NCBI nr
Match: XP_022156832.1 (uncharacterized protein At3g03773 isoform X1 [Momordica charantia])

HSP 1 Score: 228 bits (581), Expect = 1.04e-74
Identity = 108/115 (93.91%), Postives = 112/115 (97.39%), Query Frame = 0


Query: 1   MSSRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAKGLHGASFDFTLELFGS 60
           MSSRNPEVLWAQRSDK+YLTVALPDAKDISVKCEPHG+FSFSAKGL GASFDFTLELFGS
Sbjct: 1   MSSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS 60

Query: 61  IVPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDESD 115
           IVP+GCKTKVGLRNII SVQKEQKGWWKRLLKTE KPAPYLKVDW+KWCDEDESD
Sbjct: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEAKPAPYLKVDWNKWCDEDESD 115

[Close]

BLAST of Cp4.1LG08g06860 vs. NCBI nr
Match: KAG7017663.1 (hypothetical protein SDJN02_19529, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226 bits (575), Expect = 3.27e-74
Identity = 107/115 (93.04%), Postives = 112/115 (97.39%), Query Frame = 0


Query: 1   MSSRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAKGLHGASFDFTLELFGS 60
           MSSR PEVLWAQRSDK+YLTVALPDAKDISVKCEPHG+FSFSAKGL GASFDF+LELFGS
Sbjct: 1   MSSRYPEVLWAQRSDKVYLTVALPDAKDISVKCEPHGLFSFSAKGLQGASFDFSLELFGS 60

Query: 61  IVPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDESD 115
           IVP+GCKTKVGLRNII SVQKEQKGWWKRLLKTEEKPAPYLKVDW+KWCDEDESD
Sbjct: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESD 115

[Close]

BLAST of Cp4.1LG08g06860 vs. ExPASy TrEMBL
Match: A0A6J1J757 (uncharacterized protein At3g03773 OS=Cucurbita maxima OX=3661 GN=LOC111482362 PE=4 SV=1)

HSP 1 Score: 229 bits (583), Expect = 2.49e-75
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 1   MSSRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAKGLHGASFDFTLELFGS 60
           MSSRNPEVLWAQRSDK+YLTVALPDAKDISVKCEPHG+FSFSAKGL GASFDFTLELFGS
Sbjct: 1   MSSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS 60

Query: 61  IVPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDESD 115
           IVP+GCKTKVGLRNII SVQKEQKGWWKRLLK+EEKPAPYLKVDW+KWCDEDESD
Sbjct: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKSEEKPAPYLKVDWNKWCDEDESD 115

[Close]

BLAST of Cp4.1LG08g06860 vs. ExPASy TrEMBL
Match: A0A6J1F106 (uncharacterized protein At3g03773 OS=Cucurbita moschata OX=3662 GN=LOC111441403 PE=4 SV=1)

HSP 1 Score: 229 bits (583), Expect = 2.49e-75
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 1   MSSRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAKGLHGASFDFTLELFGS 60
           MSSRNPEVLWAQRSDK+YLTVALPDAKDISVKCEPHG+FSFSAKGL GASFDF+LELFGS
Sbjct: 1   MSSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPHGLFSFSAKGLQGASFDFSLELFGS 60

Query: 61  IVPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDESD 115
           IVP+GCKTKVGLRNII SVQKEQKGWWKRLLKTEEKPAPYLKVDW+KWCDEDESD
Sbjct: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESD 115

[Close]

BLAST of Cp4.1LG08g06860 vs. ExPASy TrEMBL
Match: A0A6J1DT06 (uncharacterized protein At3g03773 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023666 PE=4 SV=1)

HSP 1 Score: 228 bits (581), Expect = 5.02e-75
Identity = 108/115 (93.91%), Postives = 112/115 (97.39%), Query Frame = 0


Query: 1   MSSRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAKGLHGASFDFTLELFGS 60
           MSSRNPEVLWAQRSDK+YLTVALPDAKDISVKCEPHG+FSFSAKGL GASFDFTLELFGS
Sbjct: 1   MSSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGS 60

Query: 61  IVPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDESD 115
           IVP+GCKTKVGLRNII SVQKEQKGWWKRLLKTE KPAPYLKVDW+KWCDEDESD
Sbjct: 61  IVPEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEAKPAPYLKVDWNKWCDEDESD 115

[Close]

BLAST of Cp4.1LG08g06860 vs. ExPASy TrEMBL
Match: A0A0A0LBV6 (CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G822410 PE=4 SV=1)

HSP 1 Score: 225 bits (574), Expect = 5.86e-74
Identity = 105/115 (91.30%), Postives = 112/115 (97.39%), Query Frame = 0


Query: 1   MSSRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAKGLHGASFDFTLELFGS 60
           MSSRNPEVLWAQRSDK+YLTV+LPDAKDISVKCEPHG+FSFSAKGL G+SFDFTLELFGS
Sbjct: 1   MSSRNPEVLWAQRSDKVYLTVSLPDAKDISVKCEPHGLFSFSAKGLQGSSFDFTLELFGS 60

Query: 61  IVPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDESD 115
           IVP+GCKTKV LRNII S+QKEQKGWWKRLLKTEEKPAPYLKVDW+KWCDEDESD
Sbjct: 61  IVPEGCKTKVSLRNIICSIQKEQKGWWKRLLKTEEKPAPYLKVDWNKWCDEDESD 115

[Close]

BLAST of Cp4.1LG08g06860 vs. ExPASy TrEMBL
Match: A0A6J1DRP7 (uncharacterized protein At3g03773 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023666 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 1.14e-73
Identity = 106/113 (93.81%), Postives = 110/113 (97.35%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAKGLHGASFDFTLELFGSIV 62
           SRNPEVLWAQRSDK+YLTVALPDAKDISVKCEPHG+FSFSAKGL GASFDFTLELFGSIV
Sbjct: 2   SRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPHGLFSFSAKGLQGASFDFTLELFGSIV 61

Query: 63  PQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDESD 115
           P+GCKTKVGLRNII SVQKEQKGWWKRLLKTE KPAPYLKVDW+KWCDEDESD
Sbjct: 62  PEGCKTKVGLRNIICSVQKEQKGWWKRLLKTEAKPAPYLKVDWNKWCDEDESD 114

[Close]

BLAST of Cp4.1LG08g06860 vs. TAIR 10
Match: AT3G03773.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 1.8e-46
Identity = 83/111 (74.77%), Postives = 97/111 (87.39%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAKGLHGASFDFTLELFGSIV 62
           SRNPEVLWAQRSDK+YLTVALPDAKDISVKCEP G+FSFSA G  G  F+F+LEL+G I+
Sbjct: 2   SRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIM 61

Query: 63  PQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDE 114
            +  +  VGLRNIIFS+QKE++ WW RLLK+EEKPAPY+KVDW+KWCDEDE
Sbjct: 62  TE-YRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDE 111

[Close]

BLAST of Cp4.1LG08g06860 vs. TAIR 10
Match: AT3G03773.2 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 181.0 bits (458), Expect = 5.3e-46
Identity = 82/110 (74.55%), Postives = 96/110 (87.27%), Query Frame = 0


Query: 4   RNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAKGLHGASFDFTLELFGSIVP 63
           RNPEVLWAQRSDK+YLTVALPDAKDISVKCEP G+FSFSA G  G  F+F+LEL+G I+ 
Sbjct: 57  RNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKIMT 116

Query: 64  QGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDE 114
           +  +  VGLRNIIFS+QKE++ WW RLLK+EEKPAPY+KVDW+KWCDEDE
Sbjct: 117 E-YRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDE 165

[Close]

BLAST of Cp4.1LG08g06860 vs. TAIR 10
Match: AT4G02450.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 98.6 bits (244), Expect = 3.5e-21
Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAK-GLHGASFDFTLELFGSI 62
           SR+PEV WA+ ++K++LTV L D KD  V  +P GVF FSAK G     ++  LEL   +
Sbjct: 2   SRHPEVKWAETTEKIFLTVVLADTKDTKVNLDPEGVFDFSAKVGPENHVYELKLELADKV 61

Query: 63  VPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDE 114
             +  K  +G R+I   ++K +   W +LL+  +KP  Y+KVDW KW DED+
Sbjct: 62  NVEESKINIGERSIFCIIEKAEPERWNKLLRV-KKPPHYVKVDWDKWVDEDD 112

[Close]

BLAST of Cp4.1LG08g06860 vs. TAIR 10
Match: AT4G02450.2 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 98.6 bits (244), Expect = 3.5e-21
Identity = 48/112 (42.86%), Postives = 69/112 (61.61%), Query Frame = 0


Query: 3   SRNPEVLWAQRSDKLYLTVALPDAKDISVKCEPHGVFSFSAK-GLHGASFDFTLELFGSI 62
           SR+PEV WA+ ++K++LTV L D KD  V  +P GVF FSAK G     ++  LEL   +
Sbjct: 2   SRHPEVKWAETTEKIFLTVVLADTKDTKVNLDPEGVFDFSAKVGPENHVYELKLELADKV 61

Query: 63  VPQGCKTKVGLRNIIFSVQKEQKGWWKRLLKTEEKPAPYLKVDWSKWCDEDE 114
             +  K  +G R+I   ++K +   W +LL+  +KP  Y+KVDW KW DED+
Sbjct: 62  NVEESKINIGERSIFCIIEKAEPERWNKLLRV-KKPPHYVKVDWDKWVDEDD 112

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g06860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6ID70	2.6e-45	74.77	Co-chaperone protein p23-2 OS=Arabidopsis thaliana OX=3702 GN=P23-2 PE=1 SV=1	[more]
P0C8Z0	6.6e-25	49.11	Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica OX=39946 GN=OsI...	[more]
Q6YYB0	6.6e-25	49.11	Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q9FR62	5.6e-24	47.37	Co-chaperone protein p23-1 OS=Brassica napus OX=3708 GN=P23-1 PE=1 SV=1	[more]
Q8L7U4	4.9e-20	42.86	Co-chaperone protein p23-1 OS=Arabidopsis thaliana OX=3702 GN=P23-1 PE=1 SV=1	[more]

BLAST of Cp4.1LG08g06860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539452.1	3.11e-79	100.00	uncharacterized protein At3g03773-like [Cucurbita pepo subsp. pepo]	[more]
XP_022934141.1	5.14e-75	93.91	uncharacterized protein At3g03773 [Cucurbita moschata] >XP_023526521.1 uncharact...	[more]
XP_022983880.1	5.14e-75	93.91	uncharacterized protein At3g03773 [Cucurbita maxima]	[more]
XP_022156832.1	1.04e-74	93.91	uncharacterized protein At3g03773 isoform X1 [Momordica charantia]	[more]
KAG7017663.1	3.27e-74	93.04	hypothetical protein SDJN02_19529, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cp4.1LG08g06860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J757	2.49e-75	93.91	uncharacterized protein At3g03773 OS=Cucurbita maxima OX=3661 GN=LOC111482362 PE...	[more]
A0A6J1F106	2.49e-75	93.91	uncharacterized protein At3g03773 OS=Cucurbita moschata OX=3662 GN=LOC111441403 ...	[more]
A0A6J1DT06	5.02e-75	93.91	uncharacterized protein At3g03773 isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A0A0LBV6	5.86e-74	91.30	CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G822410 PE=4 SV=...	[more]
A0A6J1DRP7	1.14e-73	93.81	uncharacterized protein At3g03773 isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]

BLAST of Cp4.1LG08g06860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03773.1	1.8e-46	74.77	HSP20-like chaperones superfamily protein	[more]
AT3G03773.2	5.3e-46	74.55	HSP20-like chaperones superfamily protein	[more]
AT4G02450.1	3.5e-21	42.86	HSP20-like chaperones superfamily protein	[more]
AT4G02450.2	3.5e-21	42.86	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 3..115 e-value: 4.2E-33 score: 116.3
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 5..114
IPR007052	CS domain	PFAM	PF04969	CS	coord: 8..81 e-value: 3.7E-6 score: 27.9
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 3..91 score: 15.932606
None	No IPR available	PANTHER	PTHR22932:SF15	CO-CHAPERONE PROTEIN P23-2	coord: 1..114
None	No IPR available	PANTHER	PTHR22932	TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE	coord: 1..114
None	No IPR available	CDD	cd06465	p23_hB-ind1_like	coord: 6..113 e-value: 6.59567E-43 score: 134.259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g06860.1	Cp4.1LG08g06860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051131	chaperone-mediated protein complex assembly
biological_process	GO:0006457	protein folding
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0051879	Hsp90 protein binding