
Cp4.1LG08g04990 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTGAAATCAGTATTGTTTGTCTGCGTGATGGTTGCTGCCATGGGAGCTCCATTAATGGTGGTGGAAGCTCAGCTTGGGTCCATTGGCAGTCTTCTTAGCCTTACCAGAATCCAAGGAACTGTCTTTTGCACTGCCAATGGCAACATCGGCACCAATGGCACCGCCACTCCTGCCTTCCCGAGTAAGTTATTTTCAAACTAGTTGAGCTATGTTCAAATTGGCAAACTGGTTATATACGTATACATTTTTCATGCAGATGCAGCCGTGCAACTGCAATGTGGAAACGGAAACGTTGTGTCGACTGCAACAACAAACAGCGCGGGAGTGTTTTCGATTCTGTTAGATCCACTACAGCTCCTTCTCTCTTCACTCACCTCCAACTGTAGCGTCGTAGTGAACACGCCACTGTCGAGCTGCAACGCAACGTTACCCTCTGTCGGGAATTTGGTTTCGGCGTTGAATTTGGTCGGAATGACATTTCAGGGACTCCTCCGTATAACCAACATCATCCCCACGGGATTCATGTTCCAGCCATCTACATAA ATGGTATTGTTTGTCTGCGTGATGGTTGCTGCCATGGGAGCTCCATTAATGGTGGTGGAAGCTCAGCTTGGGTCCATTGGCAGTCTTCTTAGCCTTACCAGAATCCAAGGAACTGTCTTTTGCACTGCCAATGGCAACATCGGCACCAATGGCACCGCCACTCCTGCCTTCCCGAATGCAGCCGTGCAACTGCAATGTGGAAACGGAAACGTTGTGTCGACTGCAACAACAAACAGCGCGGGAGTGTTTTCGATTCTGTTAGATCCACTACAGCTCCTTCTCTCTTCACTCACCTCCAACTGTAGCGTCGTAGTGAACACGCCACTGTCGAGCTGCAACGCAACGTTACCCTCTGTCGGGAATTTGGTTTCGGCGTTGAATTTGGTCGGAATGACATTTCAGGGACTCCTCCGTATAACCAACATCATCCCCACGGGATTCATGTTCCAGCCATCTACATAA ATGGTATTGTTTGTCTGCGTGATGGTTGCTGCCATGGGAGCTCCATTAATGGTGGTGGAAGCTCAGCTTGGGTCCATTGGCAGTCTTCTTAGCCTTACCAGAATCCAAGGAACTGTCTTTTGCACTGCCAATGGCAACATCGGCACCAATGGCACCGCCACTCCTGCCTTCCCGAATGCAGCCGTGCAACTGCAATGTGGAAACGGAAACGTTGTGTCGACTGCAACAACAAACAGCGCGGGAGTGTTTTCGATTCTGTTAGATCCACTACAGCTCCTTCTCTCTTCACTCACCTCCAACTGTAGCGTCGTAGTGAACACGCCACTGTCGAGCTGCAACGCAACGTTACCCTCTGTCGGGAATTTGGTTTCGGCGTTGAATTTGGTCGGAATGACATTTCAGGGACTCCTCCGTATAACCAACATCATCCCCACGGGATTCATGTTCCAGCCATCTACATAA MVLFVCVMVAAMGAPLMVVEAQLGSIGSLLSLTRIQGTVFCTANGNIGTNGTATPAFPNAAVQLQCGNGNVVSTATTNSAGVFSILLDPLQLLLSSLTSNCSVVVNTPLSSCNATLPSVGNLVSALNLVGMTFQGLLRITNIIPTGFMFQPST Homology
BLAST of Cp4.1LG08g04990 vs. ExPASy Swiss-Prot
Match: Q56S59 (Phylloplanin OS=Nicotiana tabacum OX=4097 PE=1 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.7e-20 Identity = 63/139 (45.32%), Postives = 85/139 (61.15%), Query Frame = 0
BLAST of Cp4.1LG08g04990 vs. NCBI nr
Match: XP_023522114.1 (phylloplanin-like [Cucurbita pepo subsp. pepo] >XP_023540360.1 phylloplanin-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 287 bits (735), Expect = 2.00e-97 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Cp4.1LG08g04990 vs. NCBI nr
Match: KAG6597529.1 (hypothetical protein SDJN03_10709, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028986.1 hypothetical protein SDJN02_10169 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 280 bits (717), Expect = 1.11e-94 Identity = 149/152 (98.03%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of Cp4.1LG08g04990 vs. NCBI nr
Match: XP_022937971.1 (phylloplanin-like [Cucurbita moschata]) HSP 1 Score: 280 bits (716), Expect = 1.58e-94 Identity = 149/152 (98.03%), Postives = 150/152 (98.68%), Query Frame = 0
BLAST of Cp4.1LG08g04990 vs. NCBI nr
Match: XP_022973793.1 (phylloplanin-like [Cucurbita maxima]) HSP 1 Score: 248 bits (633), Expect = 7.08e-82 Identity = 132/152 (86.84%), Postives = 136/152 (89.47%), Query Frame = 0
BLAST of Cp4.1LG08g04990 vs. NCBI nr
Match: XP_038903470.1 (phylloplanin-like [Benincasa hispida]) HSP 1 Score: 211 bits (537), Expect = 2.87e-67 Identity = 111/151 (73.51%), Postives = 124/151 (82.12%), Query Frame = 0
BLAST of Cp4.1LG08g04990 vs. ExPASy TrEMBL
Match: A0A6J1FBV3 (phylloplanin-like OS=Cucurbita moschata OX=3662 GN=LOC111444198 PE=4 SV=1) HSP 1 Score: 280 bits (716), Expect = 7.65e-95 Identity = 149/152 (98.03%), Postives = 150/152 (98.68%), Query Frame = 0
BLAST of Cp4.1LG08g04990 vs. ExPASy TrEMBL
Match: A0A6J1IE70 (phylloplanin-like OS=Cucurbita maxima OX=3661 GN=LOC111472350 PE=4 SV=1) HSP 1 Score: 248 bits (633), Expect = 3.43e-82 Identity = 132/152 (86.84%), Postives = 136/152 (89.47%), Query Frame = 0
BLAST of Cp4.1LG08g04990 vs. ExPASy TrEMBL
Match: A0A6J1C7T1 (phylloplanin-like OS=Momordica charantia OX=3673 GN=LOC111009161 PE=4 SV=1) HSP 1 Score: 199 bits (507), Expect = 4.65e-63 Identity = 104/146 (71.23%), Postives = 122/146 (83.56%), Query Frame = 0
BLAST of Cp4.1LG08g04990 vs. ExPASy TrEMBL
Match: A0A5B7BLH4 (Putative Pollen Ole e 1 allergen and extensin family protein OS=Davidia involucrata OX=16924 GN=Din_039271 PE=4 SV=1) HSP 1 Score: 198 bits (504), Expect = 1.47e-62 Identity = 103/149 (69.13%), Postives = 119/149 (79.87%), Query Frame = 0
BLAST of Cp4.1LG08g04990 vs. ExPASy TrEMBL
Match: A0A5J5C4T7 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_000611 PE=4 SV=1) HSP 1 Score: 197 bits (501), Expect = 4.20e-62 Identity = 101/149 (67.79%), Postives = 118/149 (79.19%), Query Frame = 0
BLAST of Cp4.1LG08g04990 vs. TAIR 10
Match: AT3G16660.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32 Identity = 75/125 (60.00%), Postives = 94/125 (75.20%), Query Frame = 0
BLAST of Cp4.1LG08g04990 vs. TAIR 10
Match: AT3G16670.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 108.2 bits (269), Expect = 5.8e-24 Identity = 69/148 (46.62%), Postives = 95/148 (64.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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