Cp4.1LG08g03430 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g03430
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-H2 finger protein ATL16
Location	Cp4.1LG08: 2056645 .. 2057616 (-)
RNA-Seq Expression	Cp4.1LG08g03430
Synteny	Cp4.1LG08g03430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTCTTCCCCCAACTCAAATCTTCCCATTACCTTCCTCCATTTCCGCCGCCAATTCCTTCCCATTCCGACTCCACCAGCTTCCCCATTATCGCCATTGCCATCATCGGAATTCTCGCCACCGCCTTCTTGCTCCTCAGCTACTACGTTTTCGTCATCAATTGCTGCCTCAACTGGCACCGCATCGATCTCCTCCGCCGTCTCCCCCTCTCCTCGAGGCGCCGCCGTCCACCTCCCACCACTCCTTCTCCACCCATTCACACCAGGGGTCTCGACGAATCGGTCATTAGATCAATCCCTTTAGTTCAATACAAGAATTCAATACCCAGAGGAAAAACCTCGTCGGAATGCTCTGTTTGTTTGAGTGAATTTGGAGAGGATGAAACGGTGAGAATCATTCCCATTTGTTCACATCTTTTCCACATTGATTGCATCGACATTTGGCTGCAAAACAATCCCAATTGCCCATTATGTCGAACCACCATTTCCAGCTCTGCTCTGTTTCATCGATTTCCCCTGCCAACCTCCTCGCCGGCGGATCCAATCGGCGGTGGAAATGAAAGAGACTTCGTAGTAATTGAATTGGGTGGGATTAGAAACGACCCATCTGGTCAATTGTCACAAGAACGACCAAATTCAGGGGAATGTCCGGCGACAGCCGGAAAATTAGAACAGGGGAAGAAGCGGCGGAAGCTGCAGAAAGTGACGAGTTTAGGAGATGAGTCGATTGACACTAGAGAGAAAGACGAGAGGTTTTGTGTTCAGCCGATTAGACGGTCGGTTTCGATGGACTCGTCGGCGGAACGACAGATGTATTTGGCAGTGCAGGCGGCGCTGCGTGGAAGTACGGCGAGCCCCGGCGGCGATGGGTGTAATGGAAGAGGGAGGAGGTCTCTGTTTTCGTTTGGGAATGGGATGAGTTGCAGAAATGGCGTTGAAGTTCAGGCGGTGCGGTTGGAAGAGAGTTAG

mRNA sequence

ATGGAGTTCTTCCCCCAACTCAAATCTTCCCATTACCTTCCTCCATTTCCGCCGCCAATTCCTTCCCATTCCGACTCCACCAGCTTCCCCATTATCGCCATTGCCATCATCGGAATTCTCGCCACCGCCTTCTTGCTCCTCAGCTACTACGTTTTCGTCATCAATTGCTGCCTCAACTGGCACCGCATCGATCTCCTCCGCCGTCTCCCCCTCTCCTCGAGGCGCCGCCGTCCACCTCCCACCACTCCTTCTCCACCCATTCACACCAGGGGTCTCGACGAATCGGTCATTAGATCAATCCCTTTAGTTCAATACAAGAATTCAATACCCAGAGGAAAAACCTCGTCGGAATGCTCTGTTTGTTTGAGTGAATTTGGAGAGGATGAAACGGTGAGAATCATTCCCATTTGTTCACATCTTTTCCACATTGATTGCATCGACATTTGGCTGCAAAACAATCCCAATTGCCCATTATGTCGAACCACCATTTCCAGCTCTGCTCTGTTTCATCGATTTCCCCTGCCAACCTCCTCGCCGGCGGATCCAATCGGCGGTGGAAATGAAAGAGACTTCGTAGTAATTGAATTGGGTGGGATTAGAAACGACCCATCTGGTCAATTGTCACAAGAACGACCAAATTCAGGGGAATGTCCGGCGACAGCCGGAAAATTAGAACAGGGGAAGAAGCGGCGGAAGCTGCAGAAAGTGACGAGTTTAGGAGATGAGTCGATTGACACTAGAGAGAAAGACGAGAGGTTTTGTGTTCAGCCGATTAGACGGTCGGTTTCGATGGACTCGTCGGCGGAACGACAGATGTATTTGGCAGTGCAGGCGGCGCTGCGTGGAAGTACGGCGAGCCCCGGCGGCGATGGGTGTAATGGAAGAGGGAGGAGGTCTCTGTTTTCGTTTGGGAATGGGATGAGTTGCAGAAATGGCGTTGAAGTTCAGGCGGTGCGGTTGGAAGAGAGTTAG

Coding sequence (CDS)

ATGGAGTTCTTCCCCCAACTCAAATCTTCCCATTACCTTCCTCCATTTCCGCCGCCAATTCCTTCCCATTCCGACTCCACCAGCTTCCCCATTATCGCCATTGCCATCATCGGAATTCTCGCCACCGCCTTCTTGCTCCTCAGCTACTACGTTTTCGTCATCAATTGCTGCCTCAACTGGCACCGCATCGATCTCCTCCGCCGTCTCCCCCTCTCCTCGAGGCGCCGCCGTCCACCTCCCACCACTCCTTCTCCACCCATTCACACCAGGGGTCTCGACGAATCGGTCATTAGATCAATCCCTTTAGTTCAATACAAGAATTCAATACCCAGAGGAAAAACCTCGTCGGAATGCTCTGTTTGTTTGAGTGAATTTGGAGAGGATGAAACGGTGAGAATCATTCCCATTTGTTCACATCTTTTCCACATTGATTGCATCGACATTTGGCTGCAAAACAATCCCAATTGCCCATTATGTCGAACCACCATTTCCAGCTCTGCTCTGTTTCATCGATTTCCCCTGCCAACCTCCTCGCCGGCGGATCCAATCGGCGGTGGAAATGAAAGAGACTTCGTAGTAATTGAATTGGGTGGGATTAGAAACGACCCATCTGGTCAATTGTCACAAGAACGACCAAATTCAGGGGAATGTCCGGCGACAGCCGGAAAATTAGAACAGGGGAAGAAGCGGCGGAAGCTGCAGAAAGTGACGAGTTTAGGAGATGAGTCGATTGACACTAGAGAGAAAGACGAGAGGTTTTGTGTTCAGCCGATTAGACGGTCGGTTTCGATGGACTCGTCGGCGGAACGACAGATGTATTTGGCAGTGCAGGCGGCGCTGCGTGGAAGTACGGCGAGCCCCGGCGGCGATGGGTGTAATGGAAGAGGGAGGAGGTCTCTGTTTTCGTTTGGGAATGGGATGAGTTGCAGAAATGGCGTTGAAGTTCAGGCGGTGCGGTTGGAAGAGAGTTAG

Protein sequence

MEFFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRIDLLRRLPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSVCLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPADPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATAGKLEQGKKRRKLQKVTSLGDESIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSLFSFGNGMSCRNGVEVQAVRLEES

Homology

[Close]

BLAST of Cp4.1LG08g03430 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.5e-74
Identity = 177/356 (49.72%), Postives = 224/356 (62.92%), Query Frame = 0


Query: 7   LKSSHYLPPFPPPI--PSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRID 66
           L+   + PP PPPI   + S  TSFPI+A+A+IGILATAFLL+SYYVFVI CCLNWHRID
Sbjct: 10  LRDLSFPPPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRID 69

Query: 67  LLRRLPLSSRRR--RPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRG---------- 126
           +L R  LS RRR  + P    SP + +RGLDESVIR+IP+ ++K    +           
Sbjct: 70  ILGRFSLSRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEE 129

Query: 127 ---KTSSECSVCLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALF 186
              K S ECSVCLSEF ++E +RIIP CSHLFHIDCID+WLQNN NCPLCRT +S    F
Sbjct: 130 EEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSF 189

Query: 187 --HRFPLPTSSPADPIGGGNERDFVVIELGGI----RNDP-SGQL--SQERPNSG----- 246
              R   P++SP + +    E ++VVIELG      R+ P  G+L   QER NSG     
Sbjct: 190 PPDRVSAPSTSPENLVMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNE 249

Query: 247 ----ECPATAGKLEQG---KKRRKLQKVTSLGDESIDTRE-KDERF-CVQPIRRSVSMDS 306
                   +  KL++G   +K RKL K+TS+GDE ID R  KDE+F  +QPIRRS+SMDS
Sbjct: 250 NTQNSISPSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDS 309

Query: 307 SAERQMYLAVQAALR-----------GSTASPGGDGCNGRGRRSLFSFGNGMSCRN 312
           SA+RQ+YLAVQ A+R           G  +S  G+  N + +RS FSFG+    R+
Sbjct: 310 SADRQLYLAVQEAIRKNREVLVVGDGGGCSSSSGNVSNSKVKRSFFSFGSSRRSRS 365

[Close]

BLAST of Cp4.1LG08g03430 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.0e-62
Identity = 161/360 (44.72%), Postives = 199/360 (55.28%), Query Frame = 0


Query: 15  PFPPPIPS-----------HSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRI 74
           P PPP PS            S  T+FPI+AIA+IGILATAFLL+SYY+FVI CCLNWH+I
Sbjct: 16  PPPPPPPSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQI 75

Query: 75  DLLRRLPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYK------NSIPRGKTSSE 134
           D+ RR   SS +   P    SP    RGLDES IR+IP+ ++K          + K S E
Sbjct: 76  DIFRRRRRSSDQN--PLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQE 135

Query: 135 CSVCLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTS 194
           CSVCL+EF EDE +RIIP C H+FHIDCIDIWLQ N NCPLCRT++S  A F    +  S
Sbjct: 136 CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLI--S 195

Query: 195 SPADP---------------IGGGNERDFVVIELGGIRNDPSGQL-------SQERPNSG 254
           +P+ P               +  G + DFVVIELG    +    +        QER  S 
Sbjct: 196 APSSPRENSPHSRNRNLEPGLVLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSN 255

Query: 255 E------------CPATAGKLEQGKKRRKLQKVTSLGDESIDTREKDERFC-VQPIRRSV 312
           E             P   G     KK RK  KVTS+GDE IDTR KD  F  +QPIRRS+
Sbjct: 256 EVSTGNSPKSVSPLPIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSI 315

[Close]

BLAST of Cp4.1LG08g03430 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-24
Identity = 92/299 (30.77%), Postives = 145/299 (48.49%), Query Frame = 0


Query: 16  FPPPIP-------SHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRIDLLRR 75
           FPPP P       S S S+SF  + IA+IGIL +A +L+SYY  +   C   H+      
Sbjct: 34  FPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSET 93

Query: 76  LPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSVCLSEFGED 135
           L L+        +T     +  GL+ES+I+SI + +YK+        S+CSVCLSEF E+
Sbjct: 94  LNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSG-DGFVDGSDCSVCLSEFEEN 153

Query: 136 ETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPADPIGGGNE 195
           E++R++P C+H FH+ CID WL+++ NCPLCR  ++            ++P   +G   +
Sbjct: 154 ESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTG----------VNNPTASVG---Q 213

Query: 196 RDFVVIELGGIRNDPSGQLSQERPNSGECPATAG---------KLEQGKKRRKLQKVTSL 255
              VV+         +G +S+   N     +  G          LE G +    +    L
Sbjct: 214 NVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIEDLEIGSRNSDARSELQL 273

Query: 256 GDESIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRR 299
            +E  +T+++D      PIRRSVS++S     + +++   LR      G  G  G  +R
Sbjct: 274 PEERRETKDEDS----LPIRRSVSLNSG----VVVSIADVLREIEDEEGESGGVGTSQR 310

[Close]

BLAST of Cp4.1LG08g03430 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 4.6e-23
Identity = 98/321 (30.53%), Postives = 149/321 (46.42%), Query Frame = 0


Query: 16  FPPPIP-----SHSDSTSFPI---IAIAIIGILATAFLLLSYYVFVINCCLNWHRIDLLR 75
           FPPP P     + +D +S P+   + IAIIG+LA+AFLL+SYY F+   C     +  LR
Sbjct: 34  FPPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLASAFLLVSYYTFISKYC---GTVSSLR 93

Query: 76  RLPLSS--------------------RRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYKN 135
                S                    + R       SPP    GLDE++I  I + +Y+ 
Sbjct: 94  GRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVSPP---SGLDETLINKITVCKYRR 153

Query: 136 SIPRGKTSSECSVCLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSA 195
                 T ++CSVCL EF + E++R++P CSH FH  CID WL+++ NCPLCR  I+   
Sbjct: 154 GDGFVHT-TDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITFVT 213

Query: 196 LFHRFPLPTSSPADPIGGGNERDFVVIELGGIRN-DPSGQLSQERPNSGECPATAGKLEQ 255
           +    P P        GG N  + VV+ + G+ N     Q +  R ++ +    A  + +
Sbjct: 214 VGLASPEPEGCAPGETGGDNTHEVVVV-MDGLENLCEEQQEAVSRASTADDDHDAKDVAE 273

Query: 256 GKKR-------RKLQKVTSLGDESIDTREKDERFCVQPI-RRSVSMDSSAERQMYLAVQA 300
           G +        R+       G  S D   +D R C+  + + S+  + +A R+  L    
Sbjct: 274 GMEEANGAAEIREEGSPPKRGASSFDL-HRDNRMCIADVLQESMEDELTAARESGLLAGG 333

[Close]

BLAST of Cp4.1LG08g03430 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 3.3e-21
Identity = 68/174 (39.08%), Postives = 98/174 (56.32%), Query Frame = 0


Query: 16  FPPPIPS-------HSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCC----------- 75
           FPPP PS        S S+ F  + IA+IGILA+AF+L+SYY  +   C           
Sbjct: 37  FPPP-PSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTS 96

Query: 76  -LNWHRIDLLRRLPLSSRRRRPPPTTPSPPI---HTRGLDESVIRSIPLVQYKNSIPRGK 135
               +RI        ++       T P+  I      GLDES+I+SI + +Y+  +    
Sbjct: 97  AAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYR-KMDGFV 156

Query: 136 TSSECSVCLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSA 168
            SS+CSVCLSEF E+E++R++P C+H FH+ CID WL+++ NCPLCR  I +S+
Sbjct: 157 ESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSS 208

[Close]

BLAST of Cp4.1LG08g03430 vs. NCBI nr
Match: XP_023540628.1 (RING-H2 finger protein ATL16 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 649 bits (1675), Expect = 3.98e-235
Identity = 323/323 (100.00%), Postives = 323/323 (100.00%), Query Frame = 0


Query: 1   MEFFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           MEFFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW
Sbjct: 1   MEFFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSV 120
           HRIDLLRRLPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSV
Sbjct: 61  HRIDLLRRLPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180

Query: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATAGKLEQGKKRRKLQKVTSLG 240
           DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATAGKLEQGKKRRKLQKVTSLG
Sbjct: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATAGKLEQGKKRRKLQKVTSLG 240

Query: 241 DESIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300
           DESIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL
Sbjct: 241 DESIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300

Query: 301 FSFGNGMSCRNGVEVQAVRLEES 323
           FSFGNGMSCRNGVEVQAVRLEES
Sbjct: 301 FSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of Cp4.1LG08g03430 vs. NCBI nr
Match: KAG7028833.1 (RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 633 bits (1632), Expect = 1.43e-228
Identity = 316/323 (97.83%), Postives = 317/323 (98.14%), Query Frame = 0


Query: 1   MEFFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           ME FPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW
Sbjct: 1   MELFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSV 120
           HRIDLLRRL LSSRRRRPPPTT SPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSV
Sbjct: 61  HRIDLLRRLSLSSRRRRPPPTTHSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSS LFHRFPLPTSSPA
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSTLFHRFPLPTSSPA 180

Query: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATAGKLEQGKKRRKLQKVTSLG 240
           DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPAT GKLEQGKKRRKLQKVTSLG
Sbjct: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRRKLQKVTSLG 240

Query: 241 DESIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300
           DE IDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGC+GRGRRSL
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCHGRGRRSL 300

Query: 301 FSFGNGMSCRNGVEVQAVRLEES 323
           FSFGNGMSCRNGVEVQAVRLEES
Sbjct: 301 FSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of Cp4.1LG08g03430 vs. NCBI nr
Match: XP_022942390.1 (RING-H2 finger protein ATL16 [Cucurbita moschata])

HSP 1 Score: 630 bits (1626), Expect = 1.17e-227
Identity = 316/323 (97.83%), Postives = 316/323 (97.83%), Query Frame = 0


Query: 1   MEFFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           ME FPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW
Sbjct: 1   MESFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSV 120
           HRIDLLRRL LSSRRRRPPPTT SPPIHTRGLDESVIRSIPLVQYKNSI RGKTSSECSV
Sbjct: 61  HRIDLLRRLSLSSRRRRPPPTTHSPPIHTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSS LFHRFPLPTSSPA
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSTLFHRFPLPTSSPA 180

Query: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATAGKLEQGKKRRKLQKVTSLG 240
           DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPA AGKLEQGKKRRKLQKVTSLG
Sbjct: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPAAAGKLEQGKKRRKLQKVTSLG 240

Query: 241 DESIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300
           DE IDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300

Query: 301 FSFGNGMSCRNGVEVQAVRLEES 323
           FSFGNGMSCRNGVEVQAVRLEES
Sbjct: 301 FSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of Cp4.1LG08g03430 vs. NCBI nr
Match: XP_022975064.1 (RING-H2 finger protein ATL16-like [Cucurbita maxima])

HSP 1 Score: 616 bits (1588), Expect = 7.27e-222
Identity = 310/323 (95.98%), Postives = 312/323 (96.59%), Query Frame = 0


Query: 1   MEFFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           MEFFPQ+KSS YLPPFPPP PSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW
Sbjct: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSV 120
           HRIDLLRRL LSSRRRRP P T SPPI TRGLDESVIRSIPLVQYKNSI RGKTSSECSV
Sbjct: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180

Query: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATAGKLEQGKKRRKLQKVTSLG 240
           +PIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPAT GKLEQGKKR KLQKVTSLG
Sbjct: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240

Query: 241 DESIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300
           DE IDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300

Query: 301 FSFGNGMSCRNGVEVQAVRLEES 323
           FSFGNGMSCRNGVEVQAVRLEES
Sbjct: 301 FSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of Cp4.1LG08g03430 vs. NCBI nr
Match: XP_038877360.1 (RING-H2 finger protein ATL16 [Benincasa hispida])

HSP 1 Score: 517 bits (1331), Expect = 1.12e-182
Identity = 263/327 (80.43%), Postives = 285/327 (87.16%), Query Frame = 0


Query: 1   MEFFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           M+FF ++++S ++PPFPPP   +   +SFPII IAIIGILATA LLLSYYVFVINCCLNW
Sbjct: 1   MDFFTKIRTSQHIPPFPPPNLPNPSHSSFPIIVIAIIGILATALLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSV 120
           HRIDLLRRL  SS RR P PT  SP I  RGLD+SVIRSIPL+QYK S+P+ KTSSEC+V
Sbjct: 61  HRIDLLRRLSPSSTRRLPSPTAYSPAIENRGLDDSVIRSIPLLQYKKSVPKEKTSSECAV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEF EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSS LFHRFPLP+SSP 
Sbjct: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSVLFHRFPLPSSSPE 180

Query: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATAGKLEQGKKRRKLQKVTSLG 240
           DPIGGG ERDFVVIELGG RNDPSGQ SQ+R +SGE PA  GKLEQGKKRRKLQKVTSLG
Sbjct: 181 DPIGGGGERDFVVIELGGNRNDPSGQFSQDRASSGELPA--GKLEQGKKRRKLQKVTSLG 240

Query: 241 DESIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAAL----RGSTASPGGDGCNGRG 300
           DE IDTR+KDE+FC+QPIRRSVSMDSSAERQMYLAVQAAL    RGS  SPGGDGCNGRG
Sbjct: 241 DEWIDTRQKDEQFCIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSAVSPGGDGCNGRG 300

Query: 301 RRSLFSFGNGMSCRNGVEVQAVRLEES 323
           RRSLFSFGNG SCRN V+VQ VRLEE+
Sbjct: 301 RRSLFSFGNGRSCRNAVQVQPVRLEEN 325

[Close]

BLAST of Cp4.1LG08g03430 vs. ExPASy TrEMBL
Match: A0A6J1FW76 (RING-H2 finger protein ATL16 OS=Cucurbita moschata OX=3662 GN=LOC111447447 PE=4 SV=1)

HSP 1 Score: 630 bits (1626), Expect = 5.68e-228
Identity = 316/323 (97.83%), Postives = 316/323 (97.83%), Query Frame = 0


Query: 1   MEFFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           ME FPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW
Sbjct: 1   MESFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSV 120
           HRIDLLRRL LSSRRRRPPPTT SPPIHTRGLDESVIRSIPLVQYKNSI RGKTSSECSV
Sbjct: 61  HRIDLLRRLSLSSRRRRPPPTTHSPPIHTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSS LFHRFPLPTSSPA
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSTLFHRFPLPTSSPA 180

Query: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATAGKLEQGKKRRKLQKVTSLG 240
           DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPA AGKLEQGKKRRKLQKVTSLG
Sbjct: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPAAAGKLEQGKKRRKLQKVTSLG 240

Query: 241 DESIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300
           DE IDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300

Query: 301 FSFGNGMSCRNGVEVQAVRLEES 323
           FSFGNGMSCRNGVEVQAVRLEES
Sbjct: 301 FSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of Cp4.1LG08g03430 vs. ExPASy TrEMBL
Match: A0A6J1IJC3 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111474033 PE=4 SV=1)

HSP 1 Score: 616 bits (1588), Expect = 3.52e-222
Identity = 310/323 (95.98%), Postives = 312/323 (96.59%), Query Frame = 0


Query: 1   MEFFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           MEFFPQ+KSS YLPPFPPP PSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW
Sbjct: 1   MEFFPQIKSSQYLPPFPPPNPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSV 120
           HRIDLLRRL LSSRRRRP P T SPPI TRGLDESVIRSIPLVQYKNSI RGKTSSECSV
Sbjct: 61  HRIDLLRRLSLSSRRRRPAPNTHSPPIDTRGLDESVIRSIPLVQYKNSIARGKTSSECSV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA
Sbjct: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180

Query: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATAGKLEQGKKRRKLQKVTSLG 240
           +PIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPAT GKLEQGKKR KLQKVTSLG
Sbjct: 181 EPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATTGKLEQGKKRWKLQKVTSLG 240

Query: 241 DESIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300
           DE IDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL
Sbjct: 241 DEWIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRRSL 300

Query: 301 FSFGNGMSCRNGVEVQAVRLEES 323
           FSFGNGMSCRNGVEVQAVRLEES
Sbjct: 301 FSFGNGMSCRNGVEVQAVRLEES 323

[Close]

BLAST of Cp4.1LG08g03430 vs. ExPASy TrEMBL
Match: A0A5D3D010 (RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001510 PE=4 SV=1)

HSP 1 Score: 505 bits (1300), Expect = 2.55e-178
Identity = 262/327 (80.12%), Postives = 280/327 (85.63%), Query Frame = 0


Query: 1   MEFFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           M+FF ++K+S ++PPFPPP PSHS   SFPIIAIAIIGIL TAFLLLSYYVFVINCCLNW
Sbjct: 1   MDFFTKIKTSQHIPPFPPPNPSHS---SFPIIAIAIIGILVTAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSV 120
           HR DL+RRL  SS RR P PT  SP   TRGLDESVIRSIPL+ YK S+P  KT SEC+V
Sbjct: 61  HRFDLIRRLSPSSTRRLPSPTAYSPAFETRGLDESVIRSIPLLHYKKSMPNEKTLSECAV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEF EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSS LFHRFPLP+SSP 
Sbjct: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVLFHRFPLPSSSPE 180

Query: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATAGKLEQGKKRRKLQKVTSLG 240
           DPIG G ERDFVVIELGGIRNDPSGQ SQER NS E PA   KLEQGKK +KLQKVTSLG
Sbjct: 181 DPIGAGGERDFVVIELGGIRNDPSGQFSQERANSRELPAV--KLEQGKKWQKLQKVTSLG 240

Query: 241 DESIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAAL----RGSTASPGGDGCNGRG 300
           DE IDTREKDE+F +QPIRRSVSMDSSAERQMYLAVQAAL    RGS  SPGGDGCNGRG
Sbjct: 241 DEWIDTREKDEQFFIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSEVSPGGDGCNGRG 300

Query: 301 RRSLFSFGNGMSCRNGVEVQAVRLEES 323
           RRSLFSFGNG SCR+ V+VQ VRLEE+
Sbjct: 301 RRSLFSFGNGRSCRSSVQVQPVRLEEN 322

[Close]

BLAST of Cp4.1LG08g03430 vs. ExPASy TrEMBL
Match: A0A1S3AWQ9 (RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103483603 PE=4 SV=1)

HSP 1 Score: 505 bits (1300), Expect = 2.55e-178
Identity = 262/327 (80.12%), Postives = 280/327 (85.63%), Query Frame = 0


Query: 1   MEFFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           M+FF ++K+S ++PPFPPP PSHS   SFPIIAIAIIGIL TAFLLLSYYVFVINCCLNW
Sbjct: 1   MDFFTKIKTSQHIPPFPPPNPSHS---SFPIIAIAIIGILVTAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSV 120
           HR DL+RRL  SS RR P PT  SP   TRGLDESVIRSIPL+ YK S+P  KT SEC+V
Sbjct: 61  HRFDLIRRLSPSSTRRLPSPTAYSPAFETRGLDESVIRSIPLLHYKKSMPNEKTLSECAV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEF EDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRT+ISSS LFHRFPLP+SSP 
Sbjct: 121 CLSEFEEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTSISSSVLFHRFPLPSSSPE 180

Query: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATAGKLEQGKKRRKLQKVTSLG 240
           DPIG G ERDFVVIELGGIRNDPSGQ SQER NS E PA   KLEQGKK +KLQKVTSLG
Sbjct: 181 DPIGAGGERDFVVIELGGIRNDPSGQFSQERANSRELPAV--KLEQGKKWQKLQKVTSLG 240

Query: 241 DESIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAAL----RGSTASPGGDGCNGRG 300
           DE IDTREKDE+F +QPIRRSVSMDSSAERQMYLAVQAAL    RGS  SPGGDGCNGRG
Sbjct: 241 DEWIDTREKDEQFFIQPIRRSVSMDSSAERQMYLAVQAALQQSRRGSEVSPGGDGCNGRG 300

Query: 301 RRSLFSFGNGMSCRNGVEVQAVRLEES 323
           RRSLFSFGNG SCR+ V+VQ VRLEE+
Sbjct: 301 RRSLFSFGNGRSCRSSVQVQPVRLEEN 322

[Close]

BLAST of Cp4.1LG08g03430 vs. ExPASy TrEMBL
Match: A0A0A0L8B0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135640 PE=4 SV=1)

HSP 1 Score: 496 bits (1277), Expect = 8.09e-175
Identity = 256/327 (78.29%), Postives = 277/327 (84.71%), Query Frame = 0


Query: 1   MEFFPQLKSSHYLPPFPPPIPSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNW 60
           M+FF ++K+S ++PPFPPP PSHS   SFPIIAIAIIGIL TAFLLLSYYVFVINCCLNW
Sbjct: 1   MDFFTKIKTSQHIPPFPPPNPSHS---SFPIIAIAIIGILVTAFLLLSYYVFVINCCLNW 60

Query: 61  HRIDLLRRLPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSV 120
           HR DL+RRL  SS R  P PT  SP +HTRGLDESVIRSIPL+ Y  S+P  KTSSEC+V
Sbjct: 61  HRFDLIRRLSPSSTRPLPSPTAYSPALHTRGLDESVIRSIPLLHYNKSMPNHKTSSECAV 120

Query: 121 CLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPA 180
           CLSEF E ETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSS LFH FPLP+SSP 
Sbjct: 121 CLSEFQEHETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSLLFHPFPLPSSSPE 180

Query: 181 DPIGGGNERDFVVIELGGIRNDPSGQLSQERPNSGECPATAGKLEQGKKRRKLQKVTSLG 240
           DPI    ERDF+VIELGGIRN PSGQ SQER NS E PA   KLEQGKK +KLQKVTSLG
Sbjct: 181 DPIAAATERDFLVIELGGIRNHPSGQFSQERANSRELPAV--KLEQGKKWQKLQKVTSLG 240

Query: 241 DESIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALR----GSTASPGGDGCNGRG 300
           DE IDTREKDE+FC+QPIRRSVSMDSSAERQMY+AVQAAL+    G+  SPGGDGCNGRG
Sbjct: 241 DEWIDTREKDEQFCIQPIRRSVSMDSSAERQMYVAVQAALQQSRHGNEVSPGGDGCNGRG 300

Query: 301 RRSLFSFGNGMSCRNGVEVQAVRLEES 323
           RRSLFSFGNG SCRN V+VQ VRLEE+
Sbjct: 301 RRSLFSFGNGRSCRNAVQVQPVRLEEN 322

[Close]

BLAST of Cp4.1LG08g03430 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 280.4 bits (716), Expect = 1.8e-75
Identity = 177/356 (49.72%), Postives = 224/356 (62.92%), Query Frame = 0


Query: 7   LKSSHYLPPFPPPI--PSHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRID 66
           L+   + PP PPPI   + S  TSFPI+A+A+IGILATAFLL+SYYVFVI CCLNWHRID
Sbjct: 10  LRDLSFPPPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRID 69

Query: 67  LLRRLPLSSRRR--RPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRG---------- 126
           +L R  LS RRR  + P    SP + +RGLDESVIR+IP+ ++K    +           
Sbjct: 70  ILGRFSLSRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEE 129

Query: 127 ---KTSSECSVCLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALF 186
              K S ECSVCLSEF ++E +RIIP CSHLFHIDCID+WLQNN NCPLCRT +S    F
Sbjct: 130 EEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSF 189

Query: 187 --HRFPLPTSSPADPIGGGNERDFVVIELGGI----RNDP-SGQL--SQERPNSG----- 246
              R   P++SP + +    E ++VVIELG      R+ P  G+L   QER NSG     
Sbjct: 190 PPDRVSAPSTSPENLVMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNE 249

Query: 247 ----ECPATAGKLEQG---KKRRKLQKVTSLGDESIDTRE-KDERF-CVQPIRRSVSMDS 306
                   +  KL++G   +K RKL K+TS+GDE ID R  KDE+F  +QPIRRS+SMDS
Sbjct: 250 NTQNSISPSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDS 309

Query: 307 SAERQMYLAVQAALR-----------GSTASPGGDGCNGRGRRSLFSFGNGMSCRN 312
           SA+RQ+YLAVQ A+R           G  +S  G+  N + +RS FSFG+    R+
Sbjct: 310 SADRQLYLAVQEAIRKNREVLVVGDGGGCSSSSGNVSNSKVKRSFFSFGSSRRSRS 365

[Close]

BLAST of Cp4.1LG08g03430 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 241.9 bits (616), Expect = 7.1e-64
Identity = 161/360 (44.72%), Postives = 199/360 (55.28%), Query Frame = 0


Query: 15  PFPPPIPS-----------HSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRI 74
           P PPP PS            S  T+FPI+AIA+IGILATAFLL+SYY+FVI CCLNWH+I
Sbjct: 16  PPPPPPPSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQI 75

Query: 75  DLLRRLPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYK------NSIPRGKTSSE 134
           D+ RR   SS +   P    SP    RGLDES IR+IP+ ++K          + K S E
Sbjct: 76  DIFRRRRRSSDQN--PLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQE 135

Query: 135 CSVCLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTS 194
           CSVCL+EF EDE +RIIP C H+FHIDCIDIWLQ N NCPLCRT++S  A F    +  S
Sbjct: 136 CSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLI--S 195

Query: 195 SPADP---------------IGGGNERDFVVIELGGIRNDPSGQL-------SQERPNSG 254
           +P+ P               +  G + DFVVIELG    +    +        QER  S 
Sbjct: 196 APSSPRENSPHSRNRNLEPGLVLGGDDDFVVIELGASNGNNRESVRNIDFLTEQERVTSN 255

Query: 255 E------------CPATAGKLEQGKKRRKLQKVTSLGDESIDTREKDERFC-VQPIRRSV 312
           E             P   G     KK RK  KVTS+GDE IDTR KD  F  +QPIRRS+
Sbjct: 256 EVSTGNSPKSVSPLPIKFGNRGMYKKERKFHKVTSMGDECIDTRGKDGHFGEIQPIRRSI 315

[Close]

BLAST of Cp4.1LG08g03430 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 115.2 bits (287), Expect = 1.0e-25
Identity = 92/299 (30.77%), Postives = 145/299 (48.49%), Query Frame = 0


Query: 16  FPPPIP-------SHSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCCLNWHRIDLLRR 75
           FPPP P       S S S+SF  + IA+IGIL +A +L+SYY  +   C   H+      
Sbjct: 34  FPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSET 93

Query: 76  LPLSSRRRRPPPTTPSPPIHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSVCLSEFGED 135
           L L+        +T     +  GL+ES+I+SI + +YK+        S+CSVCLSEF E+
Sbjct: 94  LNLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYKSG-DGFVDGSDCSVCLSEFEEN 153

Query: 136 ETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSALFHRFPLPTSSPADPIGGGNE 195
           E++R++P C+H FH+ CID WL+++ NCPLCR  ++            ++P   +G   +
Sbjct: 154 ESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFVTG----------VNNPTASVG---Q 213

Query: 196 RDFVVIELGGIRNDPSGQLSQERPNSGECPATAG---------KLEQGKKRRKLQKVTSL 255
              VV+         +G +S+   N     +  G          LE G +    +    L
Sbjct: 214 NVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIEDLEIGSRNSDARSELQL 273

Query: 256 GDESIDTREKDERFCVQPIRRSVSMDSSAERQMYLAVQAALRGSTASPGGDGCNGRGRR 299
            +E  +T+++D      PIRRSVS++S     + +++   LR      G  G  G  +R
Sbjct: 274 PEERRETKDEDS----LPIRRSVSLNSG----VVVSIADVLREIEDEEGESGGVGTSQR 310

[Close]

BLAST of Cp4.1LG08g03430 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 2.3e-22
Identity = 68/174 (39.08%), Postives = 98/174 (56.32%), Query Frame = 0


Query: 16  FPPPIPS-------HSDSTSFPIIAIAIIGILATAFLLLSYYVFVINCC----------- 75
           FPPP PS        S S+ F  + IA+IGILA+AF+L+SYY  +   C           
Sbjct: 37  FPPP-PSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTS 96

Query: 76  -LNWHRIDLLRRLPLSSRRRRPPPTTPSPPI---HTRGLDESVIRSIPLVQYKNSIPRGK 135
               +RI        ++       T P+  I      GLDES+I+SI + +Y+  +    
Sbjct: 97  AAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYR-KMDGFV 156

Query: 136 TSSECSVCLSEFGEDETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSA 168
            SS+CSVCLSEF E+E++R++P C+H FH+ CID WL+++ NCPLCR  I +S+
Sbjct: 157 ESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSS 208

[Close]

BLAST of Cp4.1LG08g03430 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 3.7e-20
Identity = 48/104 (46.15%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 87  IHTRGLDESVIRSIPLVQYKNSIPRGKTSSECSVCLSEFGEDETVRIIPICSHLFHIDCI 146
           +H  GLD+++I ++P+  YK  I   K   +C+VCL EF ED+ +R++P CSH FHIDCI
Sbjct: 114 LHDSGLDQALIDALPVFLYK-EIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCI 173

Query: 147 DIWLQNNPNCPLCRTTISSSALFHRFPLPTSS----PADPIGGG 187
           D WL +N  CPLCR T+ S  L H+F  P  +      D  GGG
Sbjct: 174 DTWLLSNSTCPLCRGTLFS--LGHQFEYPDFNFGFFAGDDGGGG 214

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g03430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSW9	2.5e-74	49.72	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
P93823	1.0e-62	44.72	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q9LF64	1.4e-24	30.77	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q7XLY8	4.6e-23	30.53	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q9SRQ8	3.3e-21	39.08	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]

BLAST of Cp4.1LG08g03430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540628.1	3.98e-235	100.00	RING-H2 finger protein ATL16 [Cucurbita pepo subsp. pepo]	[more]
KAG7028833.1	1.43e-228	97.83	RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022942390.1	1.17e-227	97.83	RING-H2 finger protein ATL16 [Cucurbita moschata]	[more]
XP_022975064.1	7.27e-222	95.98	RING-H2 finger protein ATL16-like [Cucurbita maxima]	[more]
XP_038877360.1	1.12e-182	80.43	RING-H2 finger protein ATL16 [Benincasa hispida]	[more]

BLAST of Cp4.1LG08g03430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FW76	5.68e-228	97.83	RING-H2 finger protein ATL16 OS=Cucurbita moschata OX=3662 GN=LOC111447447 PE=4 ...	[more]
A0A6J1IJC3	3.52e-222	95.98	RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111474033 PE...	[more]
A0A5D3D010	2.55e-178	80.12	RING-H2 finger protein ATL16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3AWQ9	2.55e-178	80.12	RING-H2 finger protein ATL16 OS=Cucumis melo OX=3656 GN=LOC103483603 PE=4 SV=1	[more]
A0A0A0L8B0	8.09e-175	78.29	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135640 P...	[more]

BLAST of Cp4.1LG08g03430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43420.1	1.8e-75	49.72	RING/U-box superfamily protein	[more]
AT1G04360.1	7.1e-64	44.72	RING/U-box superfamily protein	[more]
AT5G17600.1	1.0e-25	30.77	RING/U-box superfamily protein	[more]
AT3G03550.1	2.3e-22	39.08	RING/U-box superfamily protein	[more]
AT1G23980.1	3.7e-20	46.15	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 118..159 e-value: 1.2E-6 score: 38.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 117..160 e-value: 9.5E-13 score: 48.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 118..160 score: 12.282736
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 84..166 e-value: 7.4E-22 score: 78.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..242
None	No IPR available	PANTHER	PTHR46913:SF1	RING-H2 FINGER PROTEIN ATL16	coord: 18..313
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 117..160 e-value: 2.92244E-17 score: 72.3345
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 117..165
IPR044600	RING-H2 finger protein ATL1/ATL16	PANTHER	PTHR46913	RING-H2 FINGER PROTEIN ATL16	coord: 18..313

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g03430.1	Cp4.1LG08g03430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity