Cp4.1LG08g02700 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g02700
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-type domain-containing protein
Location	Cp4.1LG08: 2619244 .. 2623702 (+)
RNA-Seq Expression	Cp4.1LG08g02700
Synteny	Cp4.1LG08g02700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAGGACAAAGAGCAACGAAGATTGCAAATATAGAATAATTTCGAGGAAAGGTGGTCGCAAGGATGTAAAGTTTTTCAAACAAAACACCTCTACATATATGGAATGGAAACCAAGATTGCTTTTATATCGATTGCCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCCTTTCCCGTCTCTTTTTGCTCTCCGATTCTTCTTCCTCCGCTTCGCCTCTGCAAGTTTCTTGCGGTTTCTCGTTCGATCCTCCCGCTCCTGCCGCTGTTCGCCGTTCCGTCTTCCGCCAGGTATGATCTCTGTTACTATTTTGTTCATGCTACTGTTTTATTGCTTCAAATCATGCTTTCCTCTCTGTGATTTCCTTTTGGTGTTTGTTCTTGGTGATTCGATTCGGTTTGTACTTGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTNTCGATTATTGACAGTTCTGCGTGGTTCGGGTGAGGATTCGAGTTCGTAACTCTTGAATGATGGCCGGTTGGAGGTTTTAGCATGTTTGGTTTAGATTTAAGAAGCTGATTATTTGAATAGTTTGTACAACGGTTCAATTTCGTTTAGGGTTTTGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNGGTTAGGTCGTGAAATCTTTAGCGATGTATTAGCTAAATTTGGGGCTTTATTTTTTTAGCATATTTTCTGGGACCGTGATTGGGGGAAAATAATAATTTATGTTCTTTTTAAGCTGTAATAGTTCTGCCTTGGATGCAATTGGTAAAGTATAATGTCGATACAGACCGTGGTAACGAATTTGATTTGCATCCCGCTTTTACGATCACGCTTGTCTCTTTATTTATATATATATATATATATATATATATATATANTGTCGTCCAACGATCTTCTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNCAGAATTCTAATAAATGAAGAACGTAAAATTTAGAATTTCTCTATGTTTTTAAAATTTGGCCAAGATTTTTATTTTTGTTACTTTTTTTTATAAATCACGAACTAGAAAATGTAAGTACGAATAGCTTAGTTTATATAAGTTTAATTTTCAACATAGAAAATAAAATTTGAATCATTGGCTTCGTATATTAAATCGGTCAAGTGTTCCTTTTTTTCATAAGATAAATAGATTTTCATTTGGGTATCCTACTACTATTCAGCTGGATGGTATTCTTGTCGTCGAAATCATTCACCGAGATCAGTCGATGATGCGCAAAGGAAGAAAATTCTTTTATCCTTTTAATTTTTGGATGTTTAACTCATTTATTCAATTCATCGTGGACTTCTTGGGAATTACATTAGTGGTGATTCAAAGATTTTTGGACCCGAATCACTTTGCCATTTATGTGGATGATTCTATTGTTGTAGGTTTGAAAGATAAAGGAAAGGCTGTTGGAATGAGCTTTCAAAGTAGAAATGATCTACAGGAATGGAGTGCAAGAGTTGTTGAGCGAGGAACAGTAATGGACTTCGACCTAAATTGCCCACCTCCAGATGAGTGCATTGATCCAACTGGCCCTCATCAGGAAGCAACACAGTACTACAATCATTACCAAGGACAAGCTATGGACAATCCCGAGTTTGTCGACGAGGACATTGCTATAATCTCCCCTAGGAAATTTGCTGAGGTATGTGATATTTTGGTAAATAATTTGAGCGTGTTTCTAACTAGGCCATATAAGAGGATTAACATGGTGACATATTTTTTAGGCCAGGAAGAACTTTAGACGAAACCACTTTGAGAGTAGCTGTGGTGTTGCCATTAGACGTAATGGTGCTTTCTCAGGTTTGTAGCCTTTTCTTTTCTAAGTCTTAAGCTTCTCTATTTGCATTTCAGTTGTTGATTATCTCTCAGGTAGTCTAGCTACATTGCCATTTCCCAACATTTTCTGCCTTTCTGGCAAACTTGAGATGTTGATTGAGGATGTACTTGCATTTTTGGATCATCCTTTTTACTTTTCAGTGTGGCGGAGTCTTCTATATTCTGGATTCAAAAGACTGTTAGAATGAAACTTCAGTGCATATTATGATTATATTTAGTTAGGTAAGAGGAGTTTTGTGAGATCTCACATCGGTTGGAGAGGGGAATGAAATCTTCCTTAGAAGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACCGTGATGCTGACGGCAATACATTAGCGGTGGTCTTGGGCTATTACAAATGGTATCAGAGTCAGACACTGGGCAGTGTGTCAACGAGGACATTGGGCCCTCAAGGGGGGTCGATTGTGAGATCTCACATCAATTGGAGAGGGGAACGAAGCATTCCTCATAAGGATGTGGAAACCTCTCCCTAGTAGACGCGTTTTTAAATCATGAGGTTGACGGCGATACGTAATGGGCTGAAGCGGACAATATCTACTAGCGGTGGGCTTGATCTATTACAAGTTTCAATTTTATGAAATTAGATTTCCAAGTTCTTCGCATGCAGGCTATTGTATTAAAGTTTTCGTATCTTGTCATTAGGACTACTTTGCTTCCTCAGTATGGAACCAAGCATTAGGACTACAGTGAGATCAATTAACAAATTTATTATCGTTTGTTACTCTGTTGCCAATCTGCATATGTTTTCTTATTAACCCGTCTTCAACTATTTTGCAGATTTAACGAGTTTGGCCCCTTTTACAATTTGGCCGCCCCTTACAAACCGCAATAACGTATCTATACAAGAACAAACGATTCACAACTTGGACCTTTGCTTAAGCTGCGAAAGCAGTAGTAAAGCCACAAAGGTAATACTTGATTGAACGGATTATTATTTGCTCTCAAATTTTTGGAGTTGCCTTGCCTGTTCATCGTTCAAATCTTTGGCTGCCGTTTTTCTGTCTATATTGAAACTGAATATATGTGTTCTGAAGAATTGAGTCCATTTGATAAAAAATTCATAATTGATCGTTGCGTTTAGAAAAAATGTGATCGTTTACCGAAGATTTATTATCTCTTTTTTGCTAACAGAAGTATTAGCCAAATGGGAAAAAAAATGAAAAAGAACTTTTCGGAACCACTGTTTTTAGTTTAAATACACTTTCAGCTAGCGAGTATGTTCCGTTATCCGTTCACATCTTCTTGATATCAATTAGGTGGTGGAAATATAGCAGCCAGCAGCTCTAGGAAAATCTTCAGTCAAGTTTTGATCCATAAAGCTAAAAAAAACTGTTTGATTAATCGCCTGTAAATTTGGATTATCCTTTAGATGCACGTTCCTCTCAGGGTCGATATGGTCTAATCGAAGTCCTCCGGTGCAAACATCCCAACCAATCTATTACAGTCTTCTAGAATAGTTTTTTCTCCTCGGATGCTGTCTCATAATATGATCTCCGTAGAATTTGCTTCATCTTGTGCAAGTTTCTGTAAAGGCCATGTATTGTTCTTAGCCAAGATTGCATGTGTTGGAGTCAAATTTGTACTTAGCTTCATTCATTCCTTGGAAAAACTAGTTTACCAATGTGCTGCTACCGTTTTAATCGTTGGACGTACGTGAAATAATAATTTTTCTCGCACATCCAACGGTATAAATCCGACAGTCATATCGTGCCAGCATTCTTTCCATCTATCAGTGAAATTGCCATCGGCACGAACTTGGCCGATTGTTTTGGCGAACTCGTAACCAGCTTCAAGACCATGAAACATTTAAGGTTCAATCCCTAATGAGGTTATATCTGAAGTAGATCTTTGATGTTTCTCAATCTTATGCAATTCACTTGGATTTTGCTAGCAATTACATCATTTAAACATCATTTTCCATCCCGATTTCTTTCTTCGAGCTTGAAACTAACTGTAAACTCTGTTATTGCAGGCAACAATTGACACAGACATCCCTTCTGCACTTGCACAAACTAGCAGCAGCCTCCCACCTGCAGCAGCCTCGGGTTTGCGGTGCGCGATCTGCATAGAAGCATTGGTTGAAGAAACAACAACCAAATGCGGGCACGTTTTCTGCAAGAGTTGCATCGAAACAGCCATAGCTACCCAGCACAGATGTCCTATATGTCGGCGTAAGCTTCGAAAACGAGATATTATCCGAATTTACCTACCGTTTTGAACATGAAAAATATGAATACAAATAAAAGAATATTGCATCTGTATTCTTTTTCTGATGACGAACTAGGCTTGTACTACTTGCACACAGTTGCATTAACAACAAGTATAGATTTCTTCATTTCTTTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATTCGTCATCTGTTGTATTGAATCGAAACTACAAACAAAAATTTAAAAATCTCTTCGGTGAGGTGTTTGTTTGTTTGTTTGTATTTGGTTGGATGATTCATTCAAAATTGTTTATTTATTAGTGAATTAATTT

mRNA sequence

AAGAGGACAAAGAGCAACGAAGATTGCAAATATAGAATAATTTCGAGGAAAGGTGGTCGCAAGGATGTAAAGTTTTTCAAACAAAACACCTCTACATATATGGAATGGAAACCAAGATTGCTTTTATATCGATTGCCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCCTTTCCCGTCTCTTTTTGCTCTCCGATTCTTCTTCCTCCGCTTCGCCTCTGCAAGTTTCTTGCGGTTTCTCGTTCGATCCTCCCGCTCCTGCCGCTGTTCGCCGTTCCGTCTTCCGCCAGCTGGATGGTATTCTTGTCGTCGAAATCATTCACCGAGATCAGTCGATGATGCGCAAAGGAAGAAAATTCTTTTATCCTTTTAATTTTTGGATGTTTAACTCATTTATTCAATTCATCGTGGACTTCTTGGGAATTACATTAGTGGTGATTCAAAGATTTTTGGACCCGAATCACTTTGCCATTTATGTGGATGATTCTATTGTTGTAGGTTTGAAAGATAAAGGAAAGGCTGTTGGAATGAGCTTTCAAAGTAGAAATGATCTACAGGAATGGAGTGCAAGAGTTGTTGAGCGAGGAACAGTAATGGACTTCGACCTAAATTGCCCACCTCCAGATGAGTGCATTGATCCAACTGGCCCTCATCAGGAAGCAACACAGTACTACAATCATTACCAAGGACAAGCTATGGACAATCCCGAGTTTGTCGACGAGGACATTGCTATAATCTCCCCTAGGAAATTTGCTGAGGCCAGGAAGAACTTTAGACGAAACCACTTTGAGAGTAGCTGTGGTGTTGCCATTAGACGTAATGGTGCTTTCTCAGATTTAACGAGTTTGGCCCCTTTTACAATTTGGCCGCCCCTTACAAACCGCAATAACGTATCTATACAAGAACAAACGATTCACAACTTGGACCTTTGCTTAAGCTGCGAAAGCAGTAGTAAAGCCACAAAGGCAACAATTGACACAGACATCCCTTCTGCACTTGCACAAACTAGCAGCAGCCTCCCACCTGCAGCAGCCTCGGGTTTGCGGTGCGCGATCTGCATAGAAGCATTGGTTGAAGAAACAACAACCAAATGCGGGCACGTTTTCTGCAAGAGTTGCATCGAAACAGCCATAGCTACCCAGCACAGATGTCCTATATGTCGGCGTAAGCTTCGAAAACGAGATATTATCCGAATTTACCTACCGTTTTGAACATGAAAAATATGAATACAAATAAAAGAATATTGCATCTGTATTCTTTTTCTGATGACGAACTAGGCTTGTACTACTTGCACACAGTTGCATTAACAACAAGTATAGATTTCTTCATTTCTTTGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATTCGTCATCTGTTGTATTGAATCGAAACTACAAACAAAAATTTAAAAATCTCTTCGGTGAGGTGTTTGTTTGTTTGTTTGTATTTGGTTGGATGATTCATTCAAAATTGTTTATTTATTAGTGAATTAATTT

Coding sequence (CDS)

ATGGAAACCAAGATTGCTTTTATATCGATTGCCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCCTTTCCCGTCTCTTTTTGCTCTCCGATTCTTCTTCCTCCGCTTCGCCTCTGCAAGTTTCTTGCGGTTTCTCGTTCGATCCTCCCGCTCCTGCCGCTGTTCGCCGTTCCGTCTTCCGCCAGCTGGATGGTATTCTTGTCGTCGAAATCATTCACCGAGATCAGTCGATGATGCGCAAAGGAAGAAAATTCTTTTATCCTTTTAATTTTTGGATGTTTAACTCATTTATTCAATTCATCGTGGACTTCTTGGGAATTACATTAGTGGTGATTCAAAGATTTTTGGACCCGAATCACTTTGCCATTTATGTGGATGATTCTATTGTTGTAGGTTTGAAAGATAAAGGAAAGGCTGTTGGAATGAGCTTTCAAAGTAGAAATGATCTACAGGAATGGAGTGCAAGAGTTGTTGAGCGAGGAACAGTAATGGACTTCGACCTAAATTGCCCACCTCCAGATGAGTGCATTGATCCAACTGGCCCTCATCAGGAAGCAACACAGTACTACAATCATTACCAAGGACAAGCTATGGACAATCCCGAGTTTGTCGACGAGGACATTGCTATAATCTCCCCTAGGAAATTTGCTGAGGCCAGGAAGAACTTTAGACGAAACCACTTTGAGAGTAGCTGTGGTGTTGCCATTAGACGTAATGGTGCTTTCTCAGATTTAACGAGTTTGGCCCCTTTTACAATTTGGCCGCCCCTTACAAACCGCAATAACGTATCTATACAAGAACAAACGATTCACAACTTGGACCTTTGCTTAAGCTGCGAAAGCAGTAGTAAAGCCACAAAGGCAACAATTGACACAGACATCCCTTCTGCACTTGCACAAACTAGCAGCAGCCTCCCACCTGCAGCAGCCTCGGGTTTGCGGTGCGCGATCTGCATAGAAGCATTGGTTGAAGAAACAACAACCAAATGCGGGCACGTTTTCTGCAAGAGTTGCATCGAAACAGCCATAGCTACCCAGCACAGATGTCCTATATGTCGGCGTAAGCTTCGAAAACGAGATATTATCCGAATTTACCTACCGTTTTGA

Protein sequence

METKIAFISIAASSSSSSSSSSSPLSRLFLLSDSSSSASPLQVSCGFSFDPPAPAAVRRSVFRQLDGILVVEIIHRDQSMMRKGRKFFYPFNFWMFNSFIQFIVDFLGITLVVIQRFLDPNHFAIYVDDSIVVGLKDKGKAVGMSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTNRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF

Homology

[Close]

BLAST of Cp4.1LG08g02700 vs. ExPASy Swiss-Prot
Match: P87176 (E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=slx8 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.2e-05
Identity = 38/129 (29.46%), Postives = 62/129 (48.06%), Query Frame = 0


Query: 252 PFTIWPPLTNRNNVSIQEQTIHNLDLCLSCESS-------------SKATKATIDTDIPS 311
           P ++   LTN N++  Q  TI ++ + L+ E+S                T A I+ + PS
Sbjct: 132 PASVENSLTNVNSIHAQPTTISDM-IDLTDETSYDPRKQKFEQGKNPSTTNAEIEKEEPS 191

Query: 312 ALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIAT---QHRCPICR 365
                 SS      +  +C IC+++    + T CGH+FC  CI +A+ T     +CP+CR
Sbjct: 192 KKQVVPSS---QRLADYKCVICLDSPENLSCTPCGHIFCNFCILSALGTTAATQKCPVCR 251

[Close]

BLAST of Cp4.1LG08g02700 vs. ExPASy Swiss-Prot
Match: Q9D9R0 (E3 ubiquitin-protein ligase RNF125 OS=Mus musculus OX=10090 GN=Rnf125 PE=2 SV=3)

HSP 1 Score: 50.8 bits (120), Expect = 3.8e-05
Identity = 28/77 (36.36%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 284 SSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIET 343
           SS ++K+   +  P  L ++  S  P   +   C++C+E L +   T+CGHVFC+SCI T
Sbjct: 6   SSDSSKSAPASATPRTLERSGDSELP--ITSFDCSVCLEVLHQPVRTRCGHVFCRSCIAT 65

Query: 344 AIATQHR--CPICRRKL 359
           +I   ++  CP CR  L
Sbjct: 66  SIKNNNKWTCPYCRAYL 80

[Close]

BLAST of Cp4.1LG08g02700 vs. ExPASy Swiss-Prot
Match: Q96EQ8 (E3 ubiquitin-protein ligase RNF125 OS=Homo sapiens OX=9606 GN=RNF125 PE=1 SV=4)

HSP 1 Score: 50.1 bits (118), Expect = 6.4e-05
Identity = 22/52 (42.31%), Postives = 31/52 (59.62%), Query Frame = 0


Query: 308 PPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIA-TQHRCPICRRKL 359
           P    +   CA+C+E L +   T+CGHVFC+SCI T++   +  CP CR  L
Sbjct: 28  PELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCIATSLKNNKWTCPYCRAYL 79

[Close]

BLAST of Cp4.1LG08g02700 vs. ExPASy Swiss-Prot
Match: Q17RB8 (LON peptidase N-terminal domain and RING finger protein 1 OS=Homo sapiens OX=9606 GN=LONRF1 PE=1 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 1.1e-04
Identity = 18/48 (37.50%), Postives = 28/48 (58.33%), Query Frame = 0


Query: 313 SGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRK 361
           S   C++C+    E  TT CGH FCK+C+E  +     CP+C+  L++
Sbjct: 475 SDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKE 522

[Close]

BLAST of Cp4.1LG08g02700 vs. ExPASy Swiss-Prot
Match: D3YY23 (LON peptidase N-terminal domain and RING finger protein 1 OS=Mus musculus OX=10090 GN=Lonrf1 PE=1 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 1.1e-04
Identity = 18/48 (37.50%), Postives = 28/48 (58.33%), Query Frame = 0


Query: 313 SGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRK 361
           S   C++C+    E  TT CGH FCK+C+E  +     CP+C+  L++
Sbjct: 464 SDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHAPYCPLCKESLKE 511

[Close]

BLAST of Cp4.1LG08g02700 vs. NCBI nr
Match: XP_023540616.1 (uncharacterized protein LOC111800927 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 726 bits (1873), Expect = 1.02e-263
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0


Query: 1   METKIAFISIAASSSSSSSSSSSPLSRLFLLSDSSSSASPLQVSCGFSFDPPAPAAVRRS 60
           METKIAFISIAASSSSSSSSSSSPLSRLFLLSDSSSSASPLQVSCGFSFDPPAPAAVRRS
Sbjct: 1   METKIAFISIAASSSSSSSSSSSPLSRLFLLSDSSSSASPLQVSCGFSFDPPAPAAVRRS 60

Query: 61  VFRQLDGILVVEIIHRDQSMMRKGRKFFYPFNFWMFNSFIQFIVDFLGITLVVIQRFLDP 120
           VFRQLDGILVVEIIHRDQSMMRKGRKFFYPFNFWMFNSFIQFIVDFLGITLVVIQRFLDP
Sbjct: 61  VFRQLDGILVVEIIHRDQSMMRKGRKFFYPFNFWMFNSFIQFIVDFLGITLVVIQRFLDP 120

Query: 121 NHFAIYVDDSIVVGLKDKGKAVGMSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECID 180
           NHFAIYVDDSIVVGLKDKGKAVGMSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECID
Sbjct: 121 NHFAIYVDDSIVVGLKDKGKAVGMSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECID 180

Query: 181 PTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRR 240
           PTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRR
Sbjct: 181 PTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRR 240

Query: 241 NGAFSDLTSLAPFTIWPPLTNRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSAL 300
           NGAFSDLTSLAPFTIWPPLTNRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSAL
Sbjct: 241 NGAFSDLTSLAPFTIWPPLTNRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSAL 300

Query: 301 AQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRK 360
           AQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRK
Sbjct: 301 AQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRK 360

Query: 361 RDIIRIYLPF 370
           RDIIRIYLPF
Sbjct: 361 RDIIRIYLPF 370

[Close]

BLAST of Cp4.1LG08g02700 vs. NCBI nr
Match: KAG7028749.1 (hypothetical protein SDJN02_09930, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 471 bits (1212), Expect = 3.14e-164
Identity = 230/231 (99.57%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 140 KAVGMSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQA 199
           KAVGMSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQA
Sbjct: 66  KAVGMSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQA 125

Query: 200 MDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPL 259
           MDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPL
Sbjct: 126 MDNPEFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPL 185

Query: 260 TNRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAI 319
           T+RNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAI
Sbjct: 186 TDRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAI 245

Query: 320 CIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF 370
           CIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF
Sbjct: 246 CIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF 296

[Close]

BLAST of Cp4.1LG08g02700 vs. NCBI nr
Match: XP_022935007.1 (uncharacterized protein LOC111441975 [Cucurbita moschata])

HSP 1 Score: 464 bits (1193), Expect = 1.99e-162
Identity = 226/227 (99.56%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 144 MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNP 203
           MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNP
Sbjct: 1   MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNP 60

Query: 204 EFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTNRN 263
           EFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLT+RN
Sbjct: 61  EFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTDRN 120

Query: 264 NVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEA 323
           NVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEA
Sbjct: 121 NVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEA 180

Query: 324 LVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF 370
           LVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF
Sbjct: 181 LVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF 227

[Close]

BLAST of Cp4.1LG08g02700 vs. NCBI nr
Match: XP_022974776.1 (E3 ubiquitin-protein ligase BRE1-like [Cucurbita maxima])

HSP 1 Score: 450 bits (1157), Expect = 6.01e-157
Identity = 220/227 (96.92%), Postives = 224/227 (98.68%), Query Frame = 0


Query: 144 MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNP 203
           MSFQSRNDLQEWSARVVERGTVMDFDLN PPPDECIDPTGPHQEATQYYNHYQGQAMDNP
Sbjct: 1   MSFQSRNDLQEWSARVVERGTVMDFDLNFPPPDECIDPTGPHQEATQYYNHYQGQAMDNP 60

Query: 204 EFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTNRN 263
           EFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDL+SLAPFTIWP LT+RN
Sbjct: 61  EFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLSSLAPFTIWPTLTSRN 120

Query: 264 NVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEA 323
           NVSIQEQTIHNLDLCLSCESSSKATKATIDT IPSALAQTSSSLPPAA+SGLRCAIC+EA
Sbjct: 121 NVSIQEQTIHNLDLCLSCESSSKATKATIDTGIPSALAQTSSSLPPAASSGLRCAICMEA 180

Query: 324 LVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF 370
           LVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF
Sbjct: 181 LVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF 227

[Close]

BLAST of Cp4.1LG08g02700 vs. NCBI nr
Match: KAG6597278.1 (E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 418 bits (1074), Expect = 1.15e-144
Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 0


Query: 166 MDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNF 225
           MDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISP KFAEARKNF
Sbjct: 1   MDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPTKFAEARKNF 60

Query: 226 RRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTNRNNVSIQEQTIHNLDLCLSCESSS 285
           RRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLT+RNNVSIQEQTIHNLDLCLSCESSS
Sbjct: 61  RRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTDRNNVSIQEQTIHNLDLCLSCESSS 120

Query: 286 KATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAI 345
           KATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAI
Sbjct: 121 KATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAI 180

Query: 346 ATQHRCPICRRKLRKRDIIRIYLPF 370
           ATQHRCPICRRKLRKRDIIRIYLPF
Sbjct: 181 ATQHRCPICRRKLRKRDIIRIYLPF 205

[Close]

BLAST of Cp4.1LG08g02700 vs. ExPASy TrEMBL
Match: A0A6J1F4D6 (uncharacterized protein LOC111441975 OS=Cucurbita moschata OX=3662 GN=LOC111441975 PE=4 SV=1)

HSP 1 Score: 464 bits (1193), Expect = 9.65e-163
Identity = 226/227 (99.56%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 144 MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNP 203
           MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNP
Sbjct: 1   MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNP 60

Query: 204 EFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTNRN 263
           EFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLT+RN
Sbjct: 61  EFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTDRN 120

Query: 264 NVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEA 323
           NVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEA
Sbjct: 121 NVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEA 180

Query: 324 LVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF 370
           LVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF
Sbjct: 181 LVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF 227

[Close]

BLAST of Cp4.1LG08g02700 vs. ExPASy TrEMBL
Match: A0A6J1ICB2 (E3 ubiquitin-protein ligase BRE1-like OS=Cucurbita maxima OX=3661 GN=LOC111473500 PE=4 SV=1)

HSP 1 Score: 450 bits (1157), Expect = 2.91e-157
Identity = 220/227 (96.92%), Postives = 224/227 (98.68%), Query Frame = 0


Query: 144 MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNP 203
           MSFQSRNDLQEWSARVVERGTVMDFDLN PPPDECIDPTGPHQEATQYYNHYQGQAMDNP
Sbjct: 1   MSFQSRNDLQEWSARVVERGTVMDFDLNFPPPDECIDPTGPHQEATQYYNHYQGQAMDNP 60

Query: 204 EFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTNRN 263
           EFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDL+SLAPFTIWP LT+RN
Sbjct: 61  EFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNGAFSDLSSLAPFTIWPTLTSRN 120

Query: 264 NVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEA 323
           NVSIQEQTIHNLDLCLSCESSSKATKATIDT IPSALAQTSSSLPPAA+SGLRCAIC+EA
Sbjct: 121 NVSIQEQTIHNLDLCLSCESSSKATKATIDTGIPSALAQTSSSLPPAASSGLRCAICMEA 180

Query: 324 LVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF 370
           LVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF
Sbjct: 181 LVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF 227

[Close]

BLAST of Cp4.1LG08g02700 vs. ExPASy TrEMBL
Match: A0A6J1D1D9 (E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like OS=Momordica charantia OX=3673 GN=LOC111016128 PE=4 SV=1)

HSP 1 Score: 374 bits (961), Expect = 2.38e-127
Identity = 186/233 (79.83%), Postives = 202/233 (86.70%), Query Frame = 0


Query: 144 MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNP 203
           MS Q RNDL EW+ARVVER TVMDFDLNCPPPDECI+PTGP +EA Q++NH+Q QA DNP
Sbjct: 1   MSIQGRNDLHEWNARVVERRTVMDFDLNCPPPDECINPTGPREEAAQFFNHHQRQATDNP 60

Query: 204 EFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRN------GAFSDLTSLAPFTIWP 263
           + VDEDIAIISPRKFAEARKNFRRNHF+SSCGVA+R N      GA SD+TS  PFTIWP
Sbjct: 61  DVVDEDIAIISPRKFAEARKNFRRNHFDSSCGVAVRVNANTEVYGALSDVTSWPPFTIWP 120

Query: 264 PLTNRNNVSIQEQTIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLRC 323
           PLT  NNVSI+EQTIHNLDLCLS ESSS+A     DTDIPSALAQ+SS +PPAA S LRC
Sbjct: 121 PLTINNNVSIREQTIHNLDLCLSSESSSRARTKATDTDIPSALAQSSSIIPPAAPS-LRC 180

Query: 324 AICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF 370
           AICIE LVEETTTKCGHVFC++CIETAIATQHRCPICRRKLRKRDIIRIYLPF
Sbjct: 181 AICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPF 232

[Close]

BLAST of Cp4.1LG08g02700 vs. ExPASy TrEMBL
Match: A0A5A7U158 (E3 ubiquitin-protein ligase RNF4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002840 PE=4 SV=1)

HSP 1 Score: 351 bits (900), Expect = 3.93e-118
Identity = 182/234 (77.78%), Postives = 194/234 (82.91%), Query Frame = 0


Query: 144 MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNP 203
           MS QS NDL +WSARV+ER TV+DFDLNCPPPDECIDPTGP  EA QYYNHYQGQA D  
Sbjct: 1   MSIQSSNDLHDWSARVIERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQATDA- 60

Query: 204 EFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNG------AFSDLTSLAPFTIWP 263
             +DEDIAIISPRKFAEARKNFRRNHFES  G  IRRNG      A SD+T+  PFTIW 
Sbjct: 61  --IDEDIAIISPRKFAEARKNFRRNHFESGYGAVIRRNGNTEVYGALSDVTTWPPFTIWS 120

Query: 264 PLTNRNNVSIQEQ-TIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLR 323
           PLT  NNVS+QEQ TIHNLDL LSCESSS+ATKA  DTDIPS LA  SSS+PP   + LR
Sbjct: 121 PLTISNNVSLQEQQTIHNLDLRLSCESSSRATKAKTDTDIPSTLAL-SSSIPPTDRT-LR 180

Query: 324 CAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF 370
           CAICIE LVEETTTKCGHVFC++CIETAIATQHRCPICRRKLRKRDIIRIYLPF
Sbjct: 181 CAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPF 229

[Close]

BLAST of Cp4.1LG08g02700 vs. ExPASy TrEMBL
Match: A0A1S3AW86 (uncharacterized protein LOC103483470 OS=Cucumis melo OX=3656 GN=LOC103483470 PE=4 SV=1)

HSP 1 Score: 351 bits (900), Expect = 3.93e-118
Identity = 182/234 (77.78%), Postives = 194/234 (82.91%), Query Frame = 0


Query: 144 MSFQSRNDLQEWSARVVERGTVMDFDLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNP 203
           MS QS NDL +WSARV+ER TV+DFDLNCPPPDECIDPTGP  EA QYYNHYQGQA D  
Sbjct: 1   MSIQSSNDLHDWSARVIERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQATDA- 60

Query: 204 EFVDEDIAIISPRKFAEARKNFRRNHFESSCGVAIRRNG------AFSDLTSLAPFTIWP 263
             +DEDIAIISPRKFAEARKNFRRNHFES  G  IRRNG      A SD+T+  PFTIW 
Sbjct: 61  --IDEDIAIISPRKFAEARKNFRRNHFESGYGAVIRRNGNTEVYGALSDVTTWPPFTIWS 120

Query: 264 PLTNRNNVSIQEQ-TIHNLDLCLSCESSSKATKATIDTDIPSALAQTSSSLPPAAASGLR 323
           PLT  NNVS+QEQ TIHNLDL LSCESSS+ATKA  DTDIPS LA  SSS+PP   + LR
Sbjct: 121 PLTISNNVSLQEQQTIHNLDLRLSCESSSRATKAKTDTDIPSTLAL-SSSIPPTDRT-LR 180

Query: 324 CAICIEALVEETTTKCGHVFCKSCIETAIATQHRCPICRRKLRKRDIIRIYLPF 370
           CAICIE LVEETTTKCGHVFC++CIETAIATQHRCPICRRKLRKRDIIRIYLPF
Sbjct: 181 CAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPF 229

[Close]

BLAST of Cp4.1LG08g02700 vs. TAIR 10
Match: AT5G48655.2 (RING/U-box superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 5.4e-15
Identity = 55/201 (27.36%), Postives = 93/201 (46.27%), Query Frame = 0


Query: 169 DLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRN 228
           DLN  P D+                      M + + +++D+   S   FAEA+   R  
Sbjct: 20  DLNAVPVDQEGTSASVRTLTVPITPSQPAPTMIDVDAIEDDVIESSASAFAEAKSKSRN- 79

Query: 229 HFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTNRNNVSIQEQTIHNLDLCLSCESSSKAT 288
                     RR     D+ S    T +P      N+S + + I + +  + CE +S   
Sbjct: 80  ---------ARRRPLMVDVES-GGTTRFPA-----NISNKRRRIPSSESVIDCEHAS--- 139

Query: 289 KATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQ 348
               + ++ S ++++ +  PP       C IC+    EE +TKCGH+FCK CI+ AI+ Q
Sbjct: 140 -VNDEVNMSSRVSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQ 199

Query: 349 HRCPICRRKLRKRDIIRIYLP 370
            +CP CR+K+  +++IR++LP
Sbjct: 200 GKCPTCRKKVTAKELIRVFLP 200

[Close]

BLAST of Cp4.1LG08g02700 vs. TAIR 10
Match: AT5G48655.1 (RING/U-box superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 5.4e-15
Identity = 55/201 (27.36%), Postives = 93/201 (46.27%), Query Frame = 0


Query: 169 DLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRN 228
           DLN  P D+                      M + + +++D+   S   FAEA+   R  
Sbjct: 20  DLNAVPVDQEGTSASVRTLTVPITPSQPAPTMIDVDAIEDDVIESSASAFAEAKSKSRN- 79

Query: 229 HFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTNRNNVSIQEQTIHNLDLCLSCESSSKAT 288
                     RR     D+ S    T +P      N+S + + I + +  + CE +S   
Sbjct: 80  ---------ARRRPLMVDVES-GGTTRFPA-----NISNKRRRIPSSESVIDCEHAS--- 139

Query: 289 KATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQ 348
               + ++ S ++++ +  PP       C IC+    EE +TKCGH+FCK CI+ AI+ Q
Sbjct: 140 -VNDEVNMSSRVSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQ 199

Query: 349 HRCPICRRKLRKRDIIRIYLP 370
            +CP CR+K+  +++IR++LP
Sbjct: 200 GKCPTCRKKVTAKELIRVFLP 200

[Close]

BLAST of Cp4.1LG08g02700 vs. TAIR 10
Match: AT5G48655.3 (RING/U-box superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 5.4e-15
Identity = 55/201 (27.36%), Postives = 93/201 (46.27%), Query Frame = 0


Query: 169 DLNCPPPDECIDPTGPHQEATQYYNHYQGQAMDNPEFVDEDIAIISPRKFAEARKNFRRN 228
           DLN  P D+                      M + + +++D+   S   FAEA+   R  
Sbjct: 20  DLNAVPVDQEGTSASVRTLTVPITPSQPAPTMIDVDAIEDDVIESSASAFAEAKSKSRN- 79

Query: 229 HFESSCGVAIRRNGAFSDLTSLAPFTIWPPLTNRNNVSIQEQTIHNLDLCLSCESSSKAT 288
                     RR     D+ S    T +P      N+S + + I + +  + CE +S   
Sbjct: 80  ---------ARRRPLMVDVES-GGTTRFPA-----NISNKRRRIPSSESVIDCEHAS--- 139

Query: 289 KATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAIATQ 348
               + ++ S ++++ +  PP       C IC+    EE +TKCGH+FCK CI+ AI+ Q
Sbjct: 140 -VNDEVNMSSRVSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQ 199

Query: 349 HRCPICRRKLRKRDIIRIYLP 370
            +CP CR+K+  +++IR++LP
Sbjct: 200 GKCPTCRKKVTAKELIRVFLP 200

[Close]

BLAST of Cp4.1LG08g02700 vs. TAIR 10
Match: AT3G07200.1 (RING/U-box superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 3.3e-12
Identity = 29/84 (34.52%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 286 KATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAI 345
           ++ + ++D+   +   ++ +  PP       C IC+    +E +TKCGH+FCK CI+ A+
Sbjct: 96  RSDQTSVDSVELNKPRKSKAVAPPVEEPKFSCPICLCPFTQEVSTKCGHIFCKKCIKNAL 155

Query: 346 ATQHRCPICRRKLRKRDIIRIYLP 370
           + Q +CP CR+K+  +D+IR++LP
Sbjct: 156 SLQAKCPTCRKKITVKDLIRVFLP 179

[Close]

BLAST of Cp4.1LG08g02700 vs. TAIR 10
Match: AT3G07200.2 (RING/U-box superfamily protein )

HSP 1 Score: 70.5 bits (171), Expect = 3.3e-12
Identity = 29/84 (34.52%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 286 KATKATIDTDIPSALAQTSSSLPPAAASGLRCAICIEALVEETTTKCGHVFCKSCIETAI 345
           ++ + ++D+   +   ++ +  PP       C IC+    +E +TKCGH+FCK CI+ A+
Sbjct: 96  RSDQTSVDSVELNKPRKSKAVAPPVEEPKFSCPICLCPFTQEVSTKCGHIFCKKCIKNAL 155

Query: 346 ATQHRCPICRRKLRKRDIIRIYLP 370
           + Q +CP CR+K+  +D+IR++LP
Sbjct: 156 SLQAKCPTCRKKITVKDLIRVFLP 179

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g02700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P87176	2.2e-05	29.46	E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8 OS=Schizosaccharomyces...	[more]
Q9D9R0	3.8e-05	36.36	E3 ubiquitin-protein ligase RNF125 OS=Mus musculus OX=10090 GN=Rnf125 PE=2 SV=3	[more]
Q96EQ8	6.4e-05	42.31	E3 ubiquitin-protein ligase RNF125 OS=Homo sapiens OX=9606 GN=RNF125 PE=1 SV=4	[more]
Q17RB8	1.1e-04	37.50	LON peptidase N-terminal domain and RING finger protein 1 OS=Homo sapiens OX=960...	[more]
D3YY23	1.1e-04	37.50	LON peptidase N-terminal domain and RING finger protein 1 OS=Mus musculus OX=100...	[more]

BLAST of Cp4.1LG08g02700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540616.1	1.02e-263	100.00	uncharacterized protein LOC111800927 [Cucurbita pepo subsp. pepo]	[more]
KAG7028749.1	3.14e-164	99.57	hypothetical protein SDJN02_09930, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022935007.1	1.99e-162	99.56	uncharacterized protein LOC111441975 [Cucurbita moschata]	[more]
XP_022974776.1	6.01e-157	96.92	E3 ubiquitin-protein ligase BRE1-like [Cucurbita maxima]	[more]
KAG6597278.1	1.15e-144	99.02	E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG08g02700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4D6	9.65e-163	99.56	uncharacterized protein LOC111441975 OS=Cucurbita moschata OX=3662 GN=LOC1114419...	[more]
A0A6J1ICB2	2.91e-157	96.92	E3 ubiquitin-protein ligase BRE1-like OS=Cucurbita maxima OX=3661 GN=LOC11147350...	[more]
A0A6J1D1D9	2.38e-127	79.83	E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like OS=Momordica char...	[more]
A0A5A7U158	3.93e-118	77.78	E3 ubiquitin-protein ligase RNF4-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3AW86	3.93e-118	77.78	uncharacterized protein LOC103483470 OS=Cucumis melo OX=3656 GN=LOC103483470 PE=...	[more]

BLAST of Cp4.1LG08g02700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48655.2	5.4e-15	27.36	RING/U-box superfamily protein	[more]
AT5G48655.1	5.4e-15	27.36	RING/U-box superfamily protein	[more]
AT5G48655.3	5.4e-15	27.36	RING/U-box superfamily protein	[more]
AT3G07200.1	3.3e-12	34.52	RING/U-box superfamily protein	[more]
AT3G07200.2	3.3e-12	34.52	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 317..354 e-value: 2.6E-5 score: 33.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 317..355 score: 13.182669
None	No IPR available	PFAM	PF13923	zf-C3HC4_2	coord: 316..354 e-value: 8.2E-11 score: 41.5
None	No IPR available	PANTHER	PTHR47094:SF12	ELFLESS, ISOFORM B	coord: 146..369
None	No IPR available	PANTHER	PTHR47094	ELFLESS, ISOFORM B	coord: 146..369
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 313..367
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 302..369 e-value: 3.0E-17 score: 63.8
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 332..341

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g02700.1	Cp4.1LG08g02700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding