Cp4.1LG08g02630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG08g02630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein RALF-like 24
Location	Cp4.1LG08: 2669575 .. 2669961 (-)
RNA-Seq Expression	Cp4.1LG08g02630
Synteny	Cp4.1LG08g02630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAACCCACCACTCTGTTCTTCCTTCTTTCCATCCTCCTCCTTCCACTCACTTTCCTTCAAACCCTTTTCCCCTTCTGCGATGCTGTTCTTGATCTCAGATCTTTGAAGGGCAACCAAATCGATTTAATGCCCAAAGGGGTTTGCAATCAGAAGATCGGAGAGTGCTTAACAGAGCCAGAAATGGAATCGGAGATCAGTAGGCGAGTGTTGATGATGCAGAAGAGGTATATAAGCTATGAAACTCTTAGAAGGGATATGGTTCCTTGTTCTAGACCAGGGGTTTCTTATTATGAATGCCATCCTGGTCCGGCGAATTCGTATGATCGAGGGTGCGAGGTTATTACTAGATGTGCTAGAGATGTGCATGATATAAACACTTGA

mRNA sequence

ATGGCAAAACCCACCACTCTGTTCTTCCTTCTTTCCATCCTCCTCCTTCCACTCACTTTCCTTCAAACCCTTTTCCCCTTCTGCGATGCTGTTCTTGATCTCAGATCTTTGAAGGGCAACCAAATCGATTTAATGCCCAAAGGGGTTTGCAATCAGAAGATCGGAGAGTGCTTAACAGAGCCAGAAATGGAATCGGAGATCAGTAGGCGAGTGTTGATGATGCAGAAGAGGTATATAAGCTATGAAACTCTTAGAAGGGATATGGTTCCTTGTTCTAGACCAGGGGTTTCTTATTATGAATGCCATCCTGGTCCGGCGAATTCGTATGATCGAGGGTGCGAGGTTATTACTAGATGTGCTAGAGATGTGCATGATATAAACACTTGA

Coding sequence (CDS)

ATGGCAAAACCCACCACTCTGTTCTTCCTTCTTTCCATCCTCCTCCTTCCACTCACTTTCCTTCAAACCCTTTTCCCCTTCTGCGATGCTGTTCTTGATCTCAGATCTTTGAAGGGCAACCAAATCGATTTAATGCCCAAAGGGGTTTGCAATCAGAAGATCGGAGAGTGCTTAACAGAGCCAGAAATGGAATCGGAGATCAGTAGGCGAGTGTTGATGATGCAGAAGAGGTATATAAGCTATGAAACTCTTAGAAGGGATATGGTTCCTTGTTCTAGACCAGGGGTTTCTTATTATGAATGCCATCCTGGTCCGGCGAATTCGTATGATCGAGGGTGCGAGGTTATTACTAGATGTGCTAGAGATGTGCATGATATAAACACTTGA

Protein sequence

MAKPTTLFFLLSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT

Homology

[Close]

BLAST of Cp4.1LG08g02630 vs. ExPASy Swiss-Prot
Match: Q2HIM9 (Protein RALF-like 31 OS=Arabidopsis thaliana OX=3702 GN=RALFL31 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 9.6e-25
Identity = 55/78 (70.51%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 51  NQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYD 110
           N  IGE   E  M +EISRRVLM QKRYI YETLRRDMVPC +PG SYY+C  G ANSY 
Sbjct: 38  NSIIGE--DEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGASYYDCRSGQANSYS 97

Query: 111 RGCEVITRCARDVHDINT 129
           RGC+ ITRCARD +DINT
Sbjct: 98  RGCDTITRCARDTNDINT 113

[Close]

BLAST of Cp4.1LG08g02630 vs. ExPASy Swiss-Prot
Match: Q9LK37 (Protein RALF-like 24 OS=Arabidopsis thaliana OX=3702 GN=RALFL24 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.6e-24
Identity = 65/118 (55.08%), Postives = 79/118 (66.95%), Query Frame = 0


Query: 11  LSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPEMESEISRR 70
           L+++ L L  LQT        + + S+ G +ID M     N  IGE   E  M SEISRR
Sbjct: 5   LALVYLSLLCLQTHLSI-SVTVPIPSVNG-EIDAMLNR--NGVIGEEEGEEMMPSEISRR 64

Query: 71  VLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT 129
           V+MM+K+YISYETLRRDMVPC +PG SYY C  G AN+Y+RGC VITRCARD +DI T
Sbjct: 65  VMMMRKQYISYETLRRDMVPCQKPGASYYACRSGQANAYNRGCSVITRCARDTNDIKT 118

[Close]

BLAST of Cp4.1LG08g02630 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.9e-15
Identity = 41/76 (53.95%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 48  GVCNQKIGECLTEP---EMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG 107
           G C   IGEC+ E    E++SE +RR+L   K+YISY  L+++ VPCSR G SYY C PG
Sbjct: 39  GGCKGSIGECIAEEEEFELDSESNRRIL-ATKKYISYGALQKNSVPCSRRGASYYNCKPG 98

Query: 108 -PANSYDRGCEVITRC 120
             AN Y RGC  ITRC
Sbjct: 99  AQANPYSRGCSAITRC 113

[Close]

BLAST of Cp4.1LG08g02630 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.0e-14
Identity = 46/86 (53.49%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 43  DLMP-KGVCNQKIGECL-----TEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGV 102
           D +P +  CN  I EC       E EM+SEI+RR+L   K YISY  LRR+ VPCSR G 
Sbjct: 32  DFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRILATTK-YISYGALRRNTVPCSRRGA 91

Query: 103 SYYECHPG-PANSYDRGCEVITRCAR 122
           SYY C  G  AN Y RGC  ITRC R
Sbjct: 92  SYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of Cp4.1LG08g02630 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.4e-14
Identity = 48/125 (38.40%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 1   MAKPTTLFFLLSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60
           M     ++ +++IL + ++ +++   F D++  +R+   +         C   I EC+ E
Sbjct: 1   MTNTRAIYAVIAILAIVISAVESTGDFGDSLDFVRAGSSSLF-----SGCTGSIAECIAE 60

Query: 61  P---EMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVI 120
               E +S+ISRR+L  QK+YISY  +RR+ VPCSR G SYY C  G  AN Y RGC  I
Sbjct: 61  EEEMEFDSDISRRIL-AQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTI 119

Query: 121 TRCAR 122
           TRC R
Sbjct: 121 TRCRR 119

[Close]

BLAST of Cp4.1LG08g02630 vs. NCBI nr
Match: XP_023539976.1 (protein RALF-like 31 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 263 bits (672), Expect = 1.09e-88
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MAKPTTLFFLLSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60
           MAKPTTLFFLLSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE
Sbjct: 1   MAKPTTLFFLLSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60

Query: 61  PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120
           PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA
Sbjct: 61  PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120

Query: 121 RDVHDINT 128
           RDVHDINT
Sbjct: 121 RDVHDINT 128

[Close]

BLAST of Cp4.1LG08g02630 vs. NCBI nr
Match: XP_022946007.1 (protein RALF-like 24 [Cucurbita moschata])

HSP 1 Score: 256 bits (655), Expect = 4.27e-86
Identity = 124/128 (96.88%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 1   MAKPTTLFFLLSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60
           MAKPTTLFFLLSILLLPLTFLQTLFP CDAVLDLRSLKGNQIDL+PKGVCNQKIGECLTE
Sbjct: 1   MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTE 60

Query: 61  PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120
           PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA
Sbjct: 61  PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120

Query: 121 RDVHDINT 128
           RDVHD+ T
Sbjct: 121 RDVHDVKT 128

[Close]

BLAST of Cp4.1LG08g02630 vs. NCBI nr
Match: KAG7028741.1 (Protein RALF-like 31, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 250 bits (639), Expect = 1.54e-83
Identity = 121/126 (96.03%), Postives = 123/126 (97.62%), Query Frame = 0


Query: 1   MAKPTTLFFLLSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60
           MAKPTTLFFLLSIL LPLTFLQTLFP CDAVLDLRS KGNQIDL+PKGVCNQKIGECLTE
Sbjct: 1   MAKPTTLFFLLSILFLPLTFLQTLFPLCDAVLDLRSSKGNQIDLIPKGVCNQKIGECLTE 60

Query: 61  PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120
           PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA
Sbjct: 61  PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120

Query: 121 RDVHDI 126
           RDVHD+
Sbjct: 121 RDVHDL 126

[Close]

BLAST of Cp4.1LG08g02630 vs. NCBI nr
Match: XP_022974738.1 (protein RALF-like 24 [Cucurbita maxima])

HSP 1 Score: 245 bits (625), Expect = 1.50e-81
Identity = 123/128 (96.09%), Postives = 124/128 (96.88%), Query Frame = 0


Query: 1   MAKPTTLFFLLSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60
           MAKPT LFFLLSI LLPL FLQT FPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE
Sbjct: 1   MAKPT-LFFLLSI-LLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60

Query: 61  PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120
           P+MESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA
Sbjct: 61  PQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120

Query: 121 RDVHDINT 128
           RDVHDINT
Sbjct: 121 RDVHDINT 126

[Close]

BLAST of Cp4.1LG08g02630 vs. NCBI nr
Match: KAG6582492.1 (Protein RALF-like 24, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018876.1 Protein RALF-like 24, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 228 bits (580), Expect = 1.10e-74
Identity = 112/128 (87.50%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 1   MAKPTTLFFLLSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60
           M  PT LFFL SI LLPL FLQT F FCDA+LDLRSLKG++ID+M KGVCNQKIGECLTE
Sbjct: 1   MPNPT-LFFLFSI-LLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTE 60

Query: 61  PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120
           PEMESE+SRRVLMMQK+YISY+TLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA
Sbjct: 61  PEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120

Query: 121 RDVHDINT 128
           RDVHDINT
Sbjct: 121 RDVHDINT 126

[Close]

BLAST of Cp4.1LG08g02630 vs. ExPASy TrEMBL
Match: A0A6J1G2H2 (protein RALF-like 24 OS=Cucurbita moschata OX=3662 GN=LOC111450186 PE=3 SV=1)

HSP 1 Score: 256 bits (655), Expect = 2.06e-86
Identity = 124/128 (96.88%), Postives = 126/128 (98.44%), Query Frame = 0


Query: 1   MAKPTTLFFLLSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60
           MAKPTTLFFLLSILLLPLTFLQTLFP CDAVLDLRSLKGNQIDL+PKGVCNQKIGECLTE
Sbjct: 1   MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTE 60

Query: 61  PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120
           PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA
Sbjct: 61  PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120

Query: 121 RDVHDINT 128
           RDVHD+ T
Sbjct: 121 RDVHDVKT 128

[Close]

BLAST of Cp4.1LG08g02630 vs. ExPASy TrEMBL
Match: A0A6J1IH73 (protein RALF-like 24 OS=Cucurbita maxima OX=3661 GN=LOC111473473 PE=3 SV=1)

HSP 1 Score: 245 bits (625), Expect = 7.28e-82
Identity = 123/128 (96.09%), Postives = 124/128 (96.88%), Query Frame = 0


Query: 1   MAKPTTLFFLLSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60
           MAKPT LFFLLSI LLPL FLQT FPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE
Sbjct: 1   MAKPT-LFFLLSI-LLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60

Query: 61  PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120
           P+MESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA
Sbjct: 61  PQMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120

Query: 121 RDVHDINT 128
           RDVHDINT
Sbjct: 121 RDVHDINT 126

[Close]

BLAST of Cp4.1LG08g02630 vs. ExPASy TrEMBL
Match: A0A1S3AWQ1 (protein RALF-like 24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483460 PE=3 SV=1)

HSP 1 Score: 224 bits (571), Expect = 1.34e-73
Identity = 106/128 (82.81%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MAKPTTLFFLLSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60
           MAK   LFF L  ++ PL FLQT F FCDA+LDLRS KG+++D+M KGVCNQKIGECLT+
Sbjct: 1   MAKSLFLFFFLFSIIFPLVFLQTHFSFCDAILDLRSFKGSEMDVMAKGVCNQKIGECLTD 60

Query: 61  PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120
           PEMESEISRRVLMMQK+YISY+TLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA
Sbjct: 61  PEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120

Query: 121 RDVHDINT 128
           RDVHDINT
Sbjct: 121 RDVHDINT 128

[Close]

BLAST of Cp4.1LG08g02630 vs. ExPASy TrEMBL
Match: A0A5D3CZU4 (Protein RALF-like 24 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002970 PE=3 SV=1)

HSP 1 Score: 224 bits (571), Expect = 1.34e-73
Identity = 106/128 (82.81%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MAKPTTLFFLLSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60
           MAK   LFF L  ++ PL FLQT F FCDA+LDLRS KG+++D+M KGVCNQKIGECLT+
Sbjct: 1   MAKSLFLFFFLFSIIFPLVFLQTHFSFCDAILDLRSFKGSEMDVMAKGVCNQKIGECLTD 60

Query: 61  PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120
           PEMESEISRRVLMMQK+YISY+TLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA
Sbjct: 61  PEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120

Query: 121 RDVHDINT 128
           RDVHDINT
Sbjct: 121 RDVHDINT 128

[Close]

BLAST of Cp4.1LG08g02630 vs. ExPASy TrEMBL
Match: A0A0A0L7V8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129640 PE=3 SV=1)

HSP 1 Score: 223 bits (567), Expect = 5.27e-73
Identity = 107/128 (83.59%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 1   MAKPTTLFFLLSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60
           MAK   LFFL SI + PL FLQT F FCDA+LDLRS KG+++++M KGVCNQKIGECLT+
Sbjct: 1   MAKSLFLFFLFSI-IFPLVFLQTHFSFCDAILDLRSFKGSEMEVMAKGVCNQKIGECLTD 60

Query: 61  PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120
           PEMESEISRRVLMMQK+YISY+TLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA
Sbjct: 61  PEMESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120

Query: 121 RDVHDINT 128
           RDVHDINT
Sbjct: 121 RDVHDINT 127

[Close]

BLAST of Cp4.1LG08g02630 vs. TAIR 10
Match: AT4G13950.1 (ralf-like 31 )

HSP 1 Score: 114.4 bits (285), Expect = 6.8e-26
Identity = 55/78 (70.51%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 51  NQKIGECLTEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYD 110
           N  IGE   E  M +EISRRVLM QKRYI YETLRRDMVPC +PG SYY+C  G ANSY 
Sbjct: 38  NSIIGE--DEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGASYYDCRSGQANSYS 97

Query: 111 RGCEVITRCARDVHDINT 129
           RGC+ ITRCARD +DINT
Sbjct: 98  RGCDTITRCARDTNDINT 113

[Close]

BLAST of Cp4.1LG08g02630 vs. TAIR 10
Match: AT3G23805.1 (ralf-like 24 )

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-25
Identity = 65/118 (55.08%), Postives = 79/118 (66.95%), Query Frame = 0


Query: 11  LSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPEMESEISRR 70
           L+++ L L  LQT        + + S+ G +ID M     N  IGE   E  M SEISRR
Sbjct: 5   LALVYLSLLCLQTHLSI-SVTVPIPSVNG-EIDAMLNR--NGVIGEEEGEEMMPSEISRR 64

Query: 71  VLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT 129
           V+MM+K+YISYETLRRDMVPC +PG SYY C  G AN+Y+RGC VITRCARD +DI T
Sbjct: 65  VMMMRKQYISYETLRRDMVPCQKPGASYYACRSGQANAYNRGCSVITRCARDTNDIKT 118

[Close]

BLAST of Cp4.1LG08g02630 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-15
Identity = 46/86 (53.49%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 43  DLMP-KGVCNQKIGECL-----TEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGV 102
           D +P +  CN  I EC       E EM+SEI+RR+L   K YISY  LRR+ VPCSR G 
Sbjct: 32  DFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRILATTK-YISYGALRRNTVPCSRRGA 91

Query: 103 SYYECHPG-PANSYDRGCEVITRCAR 122
           SYY C  G  AN Y RGC  ITRC R
Sbjct: 92  SYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of Cp4.1LG08g02630 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-15
Identity = 48/125 (38.40%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 1   MAKPTTLFFLLSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60
           M     ++ +++IL + ++ +++   F D++  +R+   +         C   I EC+ E
Sbjct: 1   MTNTRAIYAVIAILAIVISAVESTGDFGDSLDFVRAGSSSLF-----SGCTGSIAECIAE 60

Query: 61  P---EMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVI 120
               E +S+ISRR+L  QK+YISY  +RR+ VPCSR G SYY C  G  AN Y RGC  I
Sbjct: 61  EEEMEFDSDISRRIL-AQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTI 119

Query: 121 TRCAR 122
           TRC R
Sbjct: 121 TRCRR 119

[Close]

BLAST of Cp4.1LG08g02630 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 78.2 bits (191), Expect = 5.4e-15
Identity = 40/73 (54.79%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 50  CNQKIGECL--TEPEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPG-PA 109
           C+  I EC+   E EM+SEI+RR+L   K YISY++L+R+ VPCSR G SYY C  G  A
Sbjct: 47  CHGSIAECIGAEEEEMDSEINRRILATTK-YISYQSLKRNSVPCSRRGASYYNCQNGAQA 106

Query: 110 NSYDRGCEVITRC 120
           N Y RGC  I RC
Sbjct: 107 NPYSRGCSKIARC 118

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g02630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2HIM9	9.6e-25	70.51	Protein RALF-like 31 OS=Arabidopsis thaliana OX=3702 GN=RALFL31 PE=3 SV=1	[more]
Q9LK37	1.6e-24	55.08	Protein RALF-like 24 OS=Arabidopsis thaliana OX=3702 GN=RALFL24 PE=3 SV=1	[more]
Q945T0	6.9e-15	53.95	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q8L9P8	2.0e-14	53.49	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q9MA62	3.4e-14	38.40	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of Cp4.1LG08g02630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023539976.1	1.09e-88	100.00	protein RALF-like 31 [Cucurbita pepo subsp. pepo]	[more]
XP_022946007.1	4.27e-86	96.88	protein RALF-like 24 [Cucurbita moschata]	[more]
KAG7028741.1	1.54e-83	96.03	Protein RALF-like 31, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022974738.1	1.50e-81	96.09	protein RALF-like 24 [Cucurbita maxima]	[more]
KAG6582492.1	1.10e-74	87.50	Protein RALF-like 24, partial [Cucurbita argyrosperma subsp. sororia] >KAG701887...	[more]

BLAST of Cp4.1LG08g02630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2H2	2.06e-86	96.88	protein RALF-like 24 OS=Cucurbita moschata OX=3662 GN=LOC111450186 PE=3 SV=1	[more]
A0A6J1IH73	7.28e-82	96.09	protein RALF-like 24 OS=Cucurbita maxima OX=3661 GN=LOC111473473 PE=3 SV=1	[more]
A0A1S3AWQ1	1.34e-73	82.81	protein RALF-like 24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483460 PE=3 SV=...	[more]
A0A5D3CZU4	1.34e-73	82.81	Protein RALF-like 24 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0L7V8	5.27e-73	83.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129640 PE=3 SV=1	[more]

BLAST of Cp4.1LG08g02630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13950.1	6.8e-26	70.51	ralf-like 31	[more]
AT3G23805.1	1.2e-25	55.08	ralf-like 24	[more]
AT4G15800.1	1.4e-15	53.49	ralf-like 33	[more]
AT3G05490.1	2.4e-15	38.40	ralf-like 22	[more]
AT1G02900.1	5.4e-15	54.79	rapid alkalinization factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 60..121 e-value: 4.9E-28 score: 97.9
None	No IPR available	PANTHER	PTHR33136:SF36	PROTEIN RALF-LIKE 31	coord: 9..125
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 9..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g02630.1	Cp4.1LG08g02630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region