Cp4.1LG07g08760 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g08760
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Pre-mRNA-splicing factor 38
Location	Cp4.1LG07: 7904808 .. 7909242 (+)
RNA-Seq Expression	Cp4.1LG07g08760
Synteny	Cp4.1LG07g08760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTCGTGAGTCGCAAGACTCATTGTGCCATCCTCTCGCCGTCCGGCGTCTGAATTAGGGTTTCGATCAATCTTCTCCGTCGATTTACCTGCAACAATACTGATTTCGCCGATTTATAGCTAGTGGTTATGGCTAATCGTACGGATCCAGCTGCGAAAAGTATAAGGGGAACGAACCCGCAGAACCTGGTGGAGAAAATTCTTCGCTCGAAGATCTACCAGAACACTTACTGGAAGGAGCAGTGTTTTGGTTTGACGGCGGAGACATTGGTTGACAAGGCCATGGAGCTTGACCACCTCGGCGGTACACATGGTGGCAACCGCAAGCCTACGCCGTTCATGTGTCTCGTTATGAAGATGCTCCAGATTCAGCCGGAGAAGGAAATCGTTATCGAGTTCATCAAGAACGAAGACTACAAGTAATTGTTATTGTCATTTTAGTTTTCATTTAGCAGAACCTCTTCCTTTTGGTTAACTAGAAGCGTTGAGGAGTAGAGTGAATTGGAGGGAATATTTCAATTGTTTGTTTTATGGAGTTGAAAGAAGCCGTGATTTTGGGAAATTACTGCGAAGCTTGTGAAAATAATTACTTGTAGGTTTGGAAGCTTCTGCGGTTGATCAGTGAATCGGAAATTAAGGATAGTGAATGATCTAAGAACTTGTTGTTTGGGCATTATCTTTGGTAATTGTGATTTGATAAGCATAAGAAATGGATGAACTAATAGGACATGGTTGGTTGAGCTAACTGAAGCTATTTGGAAATGGGTTCTGTATTTCTTGTTGTACTATGGTTCTTAAAGTTGTTATTAACTCGCCTTAGTTTGCAACGATTGCTTTTATACTGTGTGGTTTTGAAAATGAATAGTTTGCAACGATTGCTTTTATACTTTTTTTTTCTTGCTTTGGACATAGATACGTTCGGGTCCTTGGTGCCTTTTACTTGCGTCTCACTGGGACTGATGTTGATGTGTATCGCTACCTGGAGCCTCTGTACAATGACTATCGGAAATTGAGGAGACAATTAGCTGATGGATGTAAATGCTGGGCCTCGTGTTGAATTTTATCTAATTGGTCATTTTGAACTTGATCGCCTCTCTAAGAAAAACTTTATGAACTTGATCTTATTTTTATCAGGTTTTTCTTTAACTCACGTGGATGAAGTCATTGATGAACTTCTTACTAAAGATTATTCGTGTGACATTGCTCTTCCACGTGTCAAGAAAAGGTATGGTACTGGTACTCACGTGGCTATTTTCCAGTCAAGTTATTTTGTAAGTGAAAGTTGATGATGTCTTATTAAAATCAGAGCCTTAGGAGAAAATGCAATATTCATTGTTTGACAAACAGAAATACATGGTCACAAGTTCTAAATGTTTCTGTTCTGTTTTCTCTCTCCCTTTATATGTCTCTAGTGTTCAATTTTTAATGCTGTGCTTCTTCTTGAAGTAACGGAAGTATGGTACACTTTGAAATTGCAGATGGAACCTTGAATCTACTGGTTCACTGCCCGCAAGGAAAAGTGCTTTAGAAGATGACTTTGAGGAGGAGGAAGAAAAAGAGGACGTTGAGCCAATTAATGACGCATTAGAAGATGAGATTCATGAGAAGGTATAAACGCCATTATCTGCTGTACGAAAATGTGCACCTAGTTTGCATTTTCTTATCCTTAGTAACTTTTTTTTTTTGATAAGAGATCCTTAGTAACTTTTTTGATACCTGGCATCTACAGAATTATTATCGAGGGAGAAGTCCTGCGCGGGAGAGAAATAAAGACAGAAGGCGTGATAGCCACAGACACAGGTCCAATCCCCTGTCTTCAGTTTTTTGGTTTCTTCTTCGTCCCTCGCCTCTTATTGATGAATTTTTTAATATTTTCTATTGTGGAGTGCACCATTAATTGAAATTCCAGTCTATTAGCTATCTTCATTTCGTAAATTACATAATTTTTCATTGAATGTGAACAATAATGTTCAAGACCAGAATCAACAATTTTAAACTCACAATTTGTATTTTATTTGAAGCCTTTTGTTGATAATTCAATTCTCTTAGTAGAGTTGGCGTTGGTGACCATTTAAAAATTAGATCAAACAAAGATTGGAGATGAATAGAAGGTTGGAATGTAGGCGTTGGTAAGCATAGAGGGGCTAGAAAGAAAAGTCAAGGTCGGTATACAAAACAAGGGGTTTGGGAACGAATCCTGTTCACACAAAAACTCTTCCTTTAGTTGAGACTTAGCATCTGAGCTTCCTCCATCTTAGTATACTAACTTAGCTTATTAGCCGTCACTCTATAAGTCCTTGTCTGTAGTTAGGGTTGAACTCTCTTTTTTGTTGGACATTTTTTTGGTATGCTCTTGTATTTTTTTTCGTTTTTCTCAATAAGAACATATTTCGTAAAAAAAGAAAAAAGGAATGGAATTTGTGGCACGGCATGAAGTTATTTGCTTGGTCTGGAAAATCCATTTCATTGTCCATCTTGGGATTGAGTTTAGTTTTGAATTCTAAATATTTAAAAATTGAGTATTTGACCGGAAGAAAGAAAGATCTTTTGCCCTTTTGACCACCTTGTGTAGGTCAAACTGAATGCTAAGTTGATTTTGGTTTTTTTACCATACAACTTATGTGAAAATAAAGATAATTCTTTGTTTGTTCTTGACATGGTAGGTTAATTAAATCAAATGAACCCTGTCTTGATCTGGCTCTATCTAAACTGATTTTGATGCACACTGAAAAAAAAACCCAGCTTTTTAATTACATAGTTGGAAGCAGTTGAAATTTTTTATTTTTGGATTGCTATCCATACTGATCAAATTAAACGTTCACATGTTTTCTGTCACAACCATGGCATTTCAAGCCATTGGTTGCTTGCTGGCTTCCTACAGTAAATTCTCAAGATCCTGCCAGGTTTCTCTGTACTGACAGTGTGCAGCTGAGAAGTATGATGGATCGTACAAATTCTTGTCAAAGTGATCTCATTTTTTCAATTTTATTTTTGTATGGCTTTCAATGGTTATCCTGGTGACCACAACTGAGAACTATCTTATGTTTTGTTTTTGTTTTTACTTTTAGCTTTTTTATGATTCGTTTTTCGGGCACCGTCAAGTTTATATTTGATCTTCTTCTTCCCAAAGGTTCTACCAATTCTGCTTTTACAGTGAAATTACCTGTTTGTGCAGCTAGCATAGGATATTTTATTCTCCATCTTTTGATCATGAAATCCTTGTCTATGATGCGCTATTTGGTTGCACTTCTGGGATGTCTTTACTGCATCGTTCCATTGAGCGAGGAACAATTTTGATCTCTTGACACCCTGTCTTCTTGTATGTAATCACAGGGACCGAGATTATGATAGAGACCGGGATTACGACAGAGACTATGATAGAGATTGGGGACGTGGAAGGGAAAGAGACAGGGACAGAGATCGAGATAGGGACAGGGATAGGGGTAGGGATAGGGACAGAGATAGGGATCGCTATCGCCTAAGGGATGATAAGGAATATAGCAGAGATCGAGACAGGGAAAGGGAAGGCAGGGAGCGGGAGAGGCGAGACAGAGATCATCATGGTAGGAGGAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAGGATCGGGAGGATGGGGAATACCGCAAGAGAAATGCCCGTAGCAGTGCCAGCCCGAGACGAAGGGATGGGGCCGAGGATAGAGACGAGCCAAAGAGGAAGAAAGAAAAGAAGGAGAAGAAAGAAGGTGGTGCAGGTGAGGAGGATCCGGAGATTGCTGAATGGAATAGGATACGTGCTTCTCTTGGACTGGCACCTCTCAAGTAGATGATTTTTCATCCAACAGTTTCAATGATCTGTGAGTAAATTCTGTTGCACAAGTGAGCAGCTTGTTATACTCTTTAATTCTATGTAGCATTAAGGTTCTGATTTCTGTATAATATGCTCTGCAGGTTTATCCTTTGTTGAATGTTACTAGAAACCACATTTTAAAATATTGCAGTGCTGCCGCAGGTGAACTCCCTCCGCCCTCTTGTCCGAGGGCTAAACATAGAAATCGGGTTTCATATCAAGTCTGGTCTTAGTTCAACTAGTTAAGATATATACCTACCTTTAAAATTCCAGTGGTAGAAAAGTAAGTTAACAAATTAGTTGCGATTGTTGTCTGTTTTTAACTTTAGAATCGCTAACAAATTAGTTGCAATTGTTGTCTGTTTTTAACTTTAGAATTGCGTTTTTCGTGTCTTTTTTCTAATTTTTTCAATTTGTTTTAGTATGGTGTTTTGTTCAATCAGTCCAATCTTTGATCGTTGTTTCTATCAACGAAAAAGTTCTCTGATTCATAGATCGAATTATAATGGACGAGTCTTGGATCATTCAATTACGTATTATCAAATTTTTTTCTTCATTTAACTCGGATATTTCTTTCAATTCAACTAATCGAATTGGGTTTCT

mRNA sequence

TAATTCGTGAGTCGCAAGACTCATTGTGCCATCCTCTCGCCGTCCGGCGTCTGAATTAGGGTTTCGATCAATCTTCTCCGTCGATTTACCTGCAACAATACTGATTTCGCCGATTTATAGCTAGTGGTTATGGCTAATCGTACGGATCCAGCTGCGAAAAGTATAAGGGGAACGAACCCGCAGAACCTGGTGGAGAAAATTCTTCGCTCGAAGATCTACCAGAACACTTACTGGAAGGAGCAGTGTTTTGGTTTGACGGCGGAGACATTGGTTGACAAGGCCATGGAGCTTGACCACCTCGGCGGTACACATGGTGGCAACCGCAAGCCTACGCCGTTCATGTGTCTCGTTATGAAGATGCTCCAGATTCAGCCGGAGAAGGAAATCGTTATCGAGTTCATCAAGAACGAAGACTACAAATACGTTCGGGTCCTTGGTGCCTTTTACTTGCGTCTCACTGGGACTGATGTTGATGTGTATCGCTACCTGGAGCCTCTGTACAATGACTATCGGAAATTGAGGAGACAATTAGCTGATGGATGTTTTTCTTTAACTCACGTGGATGAAGTCATTGATGAACTTCTTACTAAAGATTATTCGTGTGACATTGCTCTTCCACGTGTCAAGAAAAGATGGAACCTTGAATCTACTGGTTCACTGCCCGCAAGGAAAAGTGCTTTAGAAGATGACTTTGAGGAGGAGGAAGAAAAAGAGGACGTTGAGCCAATTAATGACGCATTAGAAGATGAGATTCATGAGAAGAATTATTATCGAGGGAGAAGTCCTGCGCGGGAGAGAAATAAAGACAGAAGGCGTGATAGCCACAGACACAGGGACCGAGATTATGATAGAGACCGGGATTACGACAGAGACTATGATAGAGATTGGGGACGTGGAAGGGAAAGAGACAGGGACAGAGATCGAGATAGGGACAGGGATAGGGGTAGGGATAGGGACAGAGATAGGGATCGCTATCGCCTAAGGGATGATAAGGAATATAGCAGAGATCGAGACAGGGAAAGGGAAGGCAGGGAGCGGGAGAGGCGAGACAGAGATCATCATGGTAGGAGGAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAGGATCGGGAGGATGGGGAATACCGCAAGAGAAATGCCCGTAGCAGTGCCAGCCCGAGACGAAGGGATGGGGCCGAGGATAGAGACGAGCCAAAGAGGAAGAAAGAAAAGAAGGAGAAGAAAGAAGGTGGTGCAGGTGAGGAGGATCCGGAGATTGCTGAATGGAATAGGATACGTGCTTCTCTTGGACTGGCACCTCTCAAGTAGATGATTTTTCATCCAACAGTTTCAATGATCTGTTTATCCTTTGTTGAATGTTACTAGAAACCACATTTTAAAATATTGCAGTGCTGCCGCAGGTGAACTCCCTCCGCCCTCTTGTCCGAGGGCTAAACATAGAAATCGGGTTTCATATCAAGTCTGGTCTTAGTTCAACTAGTTAAGATATATACCTACCTTTAAAATTCCAGTGGTAGAAAAGTAAGTTAACAAATTAGTTGCGATTGTTGTCTGTTTTTAACTTTAGAATCGCTAACAAATTAGTTGCAATTGTTGTCTGTTTTTAACTTTAGAATTGCGTTTTTCGTGTCTTTTTTCTAATTTTTTCAATTTGTTTTAGTATGGTGTTTTGTTCAATCAGTCCAATCTTTGATCGTTGTTTCTATCAACGAAAAAGTTCTCTGATTCATAGATCGAATTATAATGGACGAGTCTTGGATCATTCAATTACGTATTATCAAATTTTTTTCTTCATTTAACTCGGATATTTCTTTCAATTCAACTAATCGAATTGGGTTTCT

Coding sequence (CDS)

ATGGCTAATCGTACGGATCCAGCTGCGAAAAGTATAAGGGGAACGAACCCGCAGAACCTGGTGGAGAAAATTCTTCGCTCGAAGATCTACCAGAACACTTACTGGAAGGAGCAGTGTTTTGGTTTGACGGCGGAGACATTGGTTGACAAGGCCATGGAGCTTGACCACCTCGGCGGTACACATGGTGGCAACCGCAAGCCTACGCCGTTCATGTGTCTCGTTATGAAGATGCTCCAGATTCAGCCGGAGAAGGAAATCGTTATCGAGTTCATCAAGAACGAAGACTACAAATACGTTCGGGTCCTTGGTGCCTTTTACTTGCGTCTCACTGGGACTGATGTTGATGTGTATCGCTACCTGGAGCCTCTGTACAATGACTATCGGAAATTGAGGAGACAATTAGCTGATGGATGTTTTTCTTTAACTCACGTGGATGAAGTCATTGATGAACTTCTTACTAAAGATTATTCGTGTGACATTGCTCTTCCACGTGTCAAGAAAAGATGGAACCTTGAATCTACTGGTTCACTGCCCGCAAGGAAAAGTGCTTTAGAAGATGACTTTGAGGAGGAGGAAGAAAAAGAGGACGTTGAGCCAATTAATGACGCATTAGAAGATGAGATTCATGAGAAGAATTATTATCGAGGGAGAAGTCCTGCGCGGGAGAGAAATAAAGACAGAAGGCGTGATAGCCACAGACACAGGGACCGAGATTATGATAGAGACCGGGATTACGACAGAGACTATGATAGAGATTGGGGACGTGGAAGGGAAAGAGACAGGGACAGAGATCGAGATAGGGACAGGGATAGGGGTAGGGATAGGGACAGAGATAGGGATCGCTATCGCCTAAGGGATGATAAGGAATATAGCAGAGATCGAGACAGGGAAAGGGAAGGCAGGGAGCGGGAGAGGCGAGACAGAGATCATCATGGTAGGAGGAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAGGATCGGGAGGATGGGGAATACCGCAAGAGAAATGCCCGTAGCAGTGCCAGCCCGAGACGAAGGGATGGGGCCGAGGATAGAGACGAGCCAAAGAGGAAGAAAGAAAAGAAGGAGAAGAAAGAAGGTGGTGCAGGTGAGGAGGATCCGGAGATTGCTGAATGGAATAGGATACGTGCTTCTCTTGGACTGGCACCTCTCAAGTAG

Protein sequence

MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGTHGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYLEPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPARKSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPARERNKDRRRDSHRHRDRDYDRDRDYDRDYDRDWGRGRERDRDRDRDRDRDRGRDRDRDRDRYRLRDDKEYSRDRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRNARSSASPRRRDGAEDRDEPKRKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK

Homology

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BLAST of Cp4.1LG07g08760 vs. ExPASy Swiss-Prot
Match: Q8LB54 (Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana OX=3702 GN=PRP38 PE=1 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 2.0e-126
Identity = 268/395 (67.85%), Postives = 308/395 (77.97%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDP AK+IRGTNPQNLVEKI+R+KIYQ+T+WKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
            GG+RKPTPF+CL++KMLQIQPEKEIV+EFIKN+DYKYVR+LGAFYLRLTGTDVDVYRYL
Sbjct: 61  FGGSRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
           EPLYNDYRK+R++L+DG FSLTHVDEVI+ELLTKDYSCDIA+PR+KKRW LE  G L  R
Sbjct: 121 EPLYNDYRKVRQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSP--ARERNKDRRRDSHRHRDRD 240
           KS LEDDFEEEEEKE+ E I D  EDE+ +    R +SP   RER++DRRRDSHRHRDRD
Sbjct: 181 KSVLEDDFEEEEEKEENEGIADGSEDEMDQ----RRKSPERERERDRDRRRDSHRHRDRD 240

Query: 241 YDRDRDYDRDYDRDWGRGRERDRDRDRDRDRDRGRDRDRDRDRYRLRDDKEYSRDRDRER 300
           YDRD D DRD+DRD+ R R   RDRDR+RDRD  R+RDRDR+           R RDRER
Sbjct: 241 YDRDYDMDRDHDRDYERERGHGRDRDRERDRDHYRERDRDRE-----------RGRDRER 300

Query: 301 EGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRNARSSASPRRRDGAEDRDEPKRK 360
           + R+R RR            RSRSRS+DR+  E               D   DR+EPK+K
Sbjct: 301 DRRDRARR------------RSRSRSRDRKRHE--------------TDDVRDREEPKKK 354

Query: 361 KEKKEK-KEGGAGEEDPEIAEWNRIRASLGLAPLK 393
           KEKKEK KE G    +PEIAE NR+RASLG+ PL+
Sbjct: 361 KEKKEKMKEDGTDHPNPEIAEMNRLRASLGMKPLR 354

[Close]

BLAST of Cp4.1LG07g08760 vs. ExPASy Swiss-Prot
Match: Q7JVL3 (Pre-mRNA-splicing factor 38 OS=Drosophila melanogaster OX=7227 GN=Prp38 PE=1 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.8e-66
Identity = 171/326 (52.45%), Postives = 216/326 (66.26%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   AK++ GTNPQ L+EKI+RS+IY + YWKEQCF LTAE LVDKAMEL  +GG 
Sbjct: 1   MANRTVKEAKNVHGTNPQYLIEKIIRSRIYDSKYWKEQCFALTAELLVDKAMELRFVGGV 60

Query: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGN KPT F+CL +KMLQIQPEK+IV+EFIKNE++KYVR LGAFYLRLTG  +D Y+YL
Sbjct: 61  YGGNIKPTQFLCLTLKMLQIQPEKDIVVEFIKNEEFKYVRALGAFYLRLTGAALDCYKYL 120

Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
           EPLY D RKLRRQ   G F + ++DE IDELL  D  CDI LPR++KR  LE    +  +
Sbjct: 121 EPLYIDNRKLRRQNRAGQFEIVYMDEYIDELLRNDRVCDIILPRIQKRSILEENNEIEPK 180

Query: 181 KSALEDDFEEE--EEKEDVEPINDALEDEIHEKNYYRGRSPARERNKDRRRDS---HRHR 240
            S L++D ++E   ++E  +  N   E+    +   R RS +R R+++R R S   +  R
Sbjct: 181 VSVLDEDLDDELPSDEEKADETNRPKENSTAVRRPRRVRSKSRSRSRERERRSGQGNSAR 240

Query: 241 DRDYDRDRDYDRDYDRDWGRGRERD-RDRDRDRDRDRGRDRDRDRDRYRLRDDKEYSRDR 300
            RDY    D   DYDR   R R RD  + D DR ++ GR  DR+R+R      +E  RD 
Sbjct: 241 SRDY---YDELEDYDRQRNRVRNRDTHNEDYDRRQNNGR-HDRERERQDRDSIRERERDG 300

Query: 301 DREREGRERER-RDRDHHGRRRSHSR 320
           DR+R  RERER RDR  H +R   SR
Sbjct: 301 DRDRRDRERERERDRGRHDQRERDSR 322

[Close]

BLAST of Cp4.1LG07g08760 vs. ExPASy Swiss-Prot
Match: Q0P5I6 (Pre-mRNA-splicing factor 38A OS=Bos taurus OX=9913 GN=PRPF38A PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.2e-63
Identity = 159/317 (50.16%), Postives = 206/317 (64.98%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A SI GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL  +GG 
Sbjct: 1   MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV 60

Query: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR+LGA Y+RLTGT +D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL 120

Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
           EPLYNDYRK++ Q  +G F L HVDE IDELL  +  CDI LPR++KR+ LE    L  R
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDALE---DEIHEKNYYRG-----RSPARERNKDRRRDSH 240
            SALE+D ++ E  E+ E  ++ LE      H +  YR      RSP     + R R S 
Sbjct: 181 VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSR-SP 240

Query: 241 RHRDRDYDRDRDYDRDYDRDWGRGRERDRDRDRDRDRDRGRDRDRDRDRYRLRDDKEYSR 300
           R R R   R     R   R+  R +   R R R RDR R R R +    +R    + +S+
Sbjct: 241 RRRSRSPKRRSPSPR---RERHRSKSPRRHRSRSRDR-RHRSRSKSPGHHRSHRHRSHSK 300

Query: 301 DRDREREGRERERRDRD 310
             +R ++  ++ RR  +
Sbjct: 301 SPERSKKSHKKSRRGNE 312

[Close]

BLAST of Cp4.1LG07g08760 vs. ExPASy Swiss-Prot
Match: Q8NAV1 (Pre-mRNA-splicing factor 38A OS=Homo sapiens OX=9606 GN=PRPF38A PE=1 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.2e-63
Identity = 159/317 (50.16%), Postives = 206/317 (64.98%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A SI GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL  +GG 
Sbjct: 1   MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV 60

Query: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR+LGA Y+RLTGT +D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL 120

Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
           EPLYNDYRK++ Q  +G F L HVDE IDELL  +  CDI LPR++KR+ LE    L  R
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDALE---DEIHEKNYYRG-----RSPARERNKDRRRDSH 240
            SALE+D ++ E  E+ E  ++ LE      H +  YR      RSP     + R R S 
Sbjct: 181 VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSR-SP 240

Query: 241 RHRDRDYDRDRDYDRDYDRDWGRGRERDRDRDRDRDRDRGRDRDRDRDRYRLRDDKEYSR 300
           R R R   R     R   R+  R +   R R R RDR R R R +    +R    + +S+
Sbjct: 241 RRRSRSPKRRSPSPR---RERHRSKSPRRHRSRSRDR-RHRSRSKSPGHHRSHRHRSHSK 300

Query: 301 DRDREREGRERERRDRD 310
             +R ++  ++ RR  +
Sbjct: 301 SPERSKKSHKKSRRGNE 312

[Close]

BLAST of Cp4.1LG07g08760 vs. ExPASy Swiss-Prot
Match: Q8HXH6 (Pre-mRNA-splicing factor 38A OS=Macaca fascicularis OX=9541 GN=PRPF38A PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.2e-63
Identity = 159/317 (50.16%), Postives = 206/317 (64.98%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A SI GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL  +GG 
Sbjct: 1   MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV 60

Query: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR+LGA Y+RLTGT +D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL 120

Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
           EPLYNDYRK++ Q  +G F L HVDE IDELL  +  CDI LPR++KR+ LE    L  R
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDALE---DEIHEKNYYRG-----RSPARERNKDRRRDSH 240
            SALE+D ++ E  E+ E  ++ LE      H +  YR      RSP     + R R S 
Sbjct: 181 VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSR-SP 240

Query: 241 RHRDRDYDRDRDYDRDYDRDWGRGRERDRDRDRDRDRDRGRDRDRDRDRYRLRDDKEYSR 300
           R R R   R     R   R+  R +   R R R RDR R R R +    +R    + +S+
Sbjct: 241 RRRSRSPKRRSPSPR---RERHRSKSPRRHRSRSRDR-RHRSRSKSPGHHRSHRHRSHSK 300

Query: 301 DRDREREGRERERRDRD 310
             +R ++  ++ RR  +
Sbjct: 301 SPERSKKSHKKSRRGNE 312

[Close]

BLAST of Cp4.1LG07g08760 vs. NCBI nr
Match: XP_023537588.1 (pre-mRNA-splicing factor 38-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 729 bits (1881), Expect = 3.42e-264
Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
           EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPARERNKDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPARERNKDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPARERNKDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRGRDRDRDRDRYRLRDDKEYSRDRDREREG 300
           RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRGRDRDRDRDRYRLRDDKEYSRDRDREREG
Sbjct: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRGRDRDRDRDRYRLRDDKEYSRDRDREREG 300

Query: 301 RERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRNARSSASPRRRDGAEDRDEPKRKKE 360
           RERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRNARSSASPRRRDGAEDRDEPKRKKE
Sbjct: 301 RERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRNARSSASPRRRDGAEDRDEPKRKKE 360

Query: 361 KKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 392
           KKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 KKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 392

[Close]

BLAST of Cp4.1LG07g08760 vs. NCBI nr
Match: KAG7021069.1 (Pre-mRNA-splicing factor 38 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 709 bits (1829), Expect = 4.02e-256
Identity = 388/401 (96.76%), Postives = 390/401 (97.26%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
           EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPARERNKDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSP RER+KDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRGRDRDR--------DRDRYRLRDDKEYSR 300
           RDRDYDRDYDRDWGRGRERDRDRDRDRDRDR RDRDR        DRDRYRLRDDKEYSR
Sbjct: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300

Query: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRNARSSASPRRRDGAEDR 360
           DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKR+ARSSASPRRRDGAEDR
Sbjct: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR 360

Query: 361 DEPKRKKEKKEKKEGGA-GEEDPEIAEWNRIRASLGLAPLK 392
           DEPKRKKEKKEKKEGGA GEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 DEPKRKKEKKEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK 401

[Close]

BLAST of Cp4.1LG07g08760 vs. NCBI nr
Match: XP_022965789.1 (pre-mRNA-splicing factor 38-like [Cucurbita maxima] >XP_022965790.1 pre-mRNA-splicing factor 38-like [Cucurbita maxima])

HSP 1 Score: 706 bits (1823), Expect = 2.74e-255
Identity = 385/396 (97.22%), Postives = 388/396 (97.98%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
           EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPARERNKDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSP RER+KDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDR----GRDRDRDRDRYRLRDDKEYSRDRDR 300
           RDRDYDRDYDRD GRGRERDRDRDRDRDRDR    GRDRDRDRDRYRLRDDKEYSRDRD 
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRDRDRDRDRDRDRGRDRDRDRDRYRLRDDKEYSRDRDG 300

Query: 301 EREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRNARSSASPRRRDGAEDRDEPK 360
           EREGRERERRDRDHHGRRRSHSR+RSRSKDREDGEYRKR+AR SASPRRRDGAEDRDEPK
Sbjct: 301 EREGRERERRDRDHHGRRRSHSRNRSRSKDREDGEYRKRHARCSASPRRRDGAEDRDEPK 360

Query: 361 RKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 392
           RKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 RKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 396

[Close]

BLAST of Cp4.1LG07g08760 vs. NCBI nr
Match: XP_022937574.1 (pre-mRNA-splicing factor 38-like [Cucurbita moschata] >XP_022937575.1 pre-mRNA-splicing factor 38-like [Cucurbita moschata])

HSP 1 Score: 706 bits (1822), Expect = 4.51e-255
Identity = 386/400 (96.50%), Postives = 388/400 (97.00%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
           EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPARERNKDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSP RER+KDRR DSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRHDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRGRDRDR--------DRDRYRLRDDKEYSR 300
           RDRDYDRDYDRD GRGRERDRDRDRDRDRDR RDRDR        DRDRYRLRDDKEYSR
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300

Query: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRNARSSASPRRRDGAEDR 360
           DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKR+ARSSASPRRRDGAEDR
Sbjct: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR 360

Query: 361 DEPKRKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 392
           DEPKRKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 DEPKRKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 400

[Close]

BLAST of Cp4.1LG07g08760 vs. NCBI nr
Match: KAG6586235.1 (Pre-mRNA-splicing factor 38, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 703 bits (1815), Expect = 5.46e-254
Identity = 387/401 (96.51%), Postives = 389/401 (97.01%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
           EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPARERNKDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSP RER+KDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRGRDRDR--------DRDRYRLRDDKEYSR 300
           RDRDYDRDYDRD GRGRERDRDRDRDRDRDR RDRDR        DRDRYRLRDDKEYSR
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300

Query: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRNARSSASPRRRDGAEDR 360
           DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKR+ARSSASPRRRDGAEDR
Sbjct: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR 360

Query: 361 DEPKRKKEKKEKKEGGA-GEEDPEIAEWNRIRASLGLAPLK 392
           DEPKRKKEKKEKKEGGA GEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 DEPKRKKEKKEKKEGGAAGEEDPEIAEWNRIRASLGLAPLK 401

[Close]

BLAST of Cp4.1LG07g08760 vs. ExPASy TrEMBL
Match: A0A6J1HPQ9 (Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111465574 PE=3 SV=1)

HSP 1 Score: 706 bits (1823), Expect = 1.32e-255
Identity = 385/396 (97.22%), Postives = 388/396 (97.98%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
           EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPARERNKDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSP RER+KDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDR----GRDRDRDRDRYRLRDDKEYSRDRDR 300
           RDRDYDRDYDRD GRGRERDRDRDRDRDRDR    GRDRDRDRDRYRLRDDKEYSRDRD 
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRDRDRDRDRDRDRGRDRDRDRDRYRLRDDKEYSRDRDG 300

Query: 301 EREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRNARSSASPRRRDGAEDRDEPK 360
           EREGRERERRDRDHHGRRRSHSR+RSRSKDREDGEYRKR+AR SASPRRRDGAEDRDEPK
Sbjct: 301 EREGRERERRDRDHHGRRRSHSRNRSRSKDREDGEYRKRHARCSASPRRRDGAEDRDEPK 360

Query: 361 RKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 392
           RKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 RKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 396

[Close]

BLAST of Cp4.1LG07g08760 vs. ExPASy TrEMBL
Match: A0A6J1FBK8 (Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111443943 PE=3 SV=1)

HSP 1 Score: 706 bits (1822), Expect = 2.18e-255
Identity = 386/400 (96.50%), Postives = 388/400 (97.00%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
           EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPARERNKDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSP RER+KDRR DSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRHDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRGRDRDR--------DRDRYRLRDDKEYSR 300
           RDRDYDRDYDRD GRGRERDRDRDRDRDRDR RDRDR        DRDRYRLRDDKEYSR
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRDRDRDRDRDRDRDRGRDRDRDRDRDRYRLRDDKEYSR 300

Query: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRNARSSASPRRRDGAEDR 360
           DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKR+ARSSASPRRRDGAEDR
Sbjct: 301 DRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAEDR 360

Query: 361 DEPKRKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 392
           DEPKRKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 DEPKRKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 400

[Close]

BLAST of Cp4.1LG07g08760 vs. ExPASy TrEMBL
Match: A0A1S3BXB0 (Pre-mRNA-splicing factor 38 OS=Cucumis melo OX=3656 GN=LOC103494470 PE=3 SV=1)

HSP 1 Score: 666 bits (1719), Expect = 9.58e-240
Identity = 364/398 (91.46%), Postives = 381/398 (95.73%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
           EPLYNDYRKLRR+L+DGCFSL+HVDEVIDELLTKDYSCDIALPRVKKRW LES+GSLP R
Sbjct: 121 EPLYNDYRKLRRKLSDGCFSLSHVDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPARERNKDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKE+ EPIND+LED+IHEKNYYRGRSP RER++DRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRGRDRDR------DRDRYRLRDDKEYSRDR 300
           RDRDYDRDYDRD GRGRERDRDR+RDRDR+R RDRDR      DRDRYRLRD+KEY RDR
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRERDRDRDRERERDRDRDRYRLRDEKEYGRDR 300

Query: 301 DREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRNARSSASPRRRDGAEDRDE 360
           DREREGRERERRDRD  GRRRSHSRSRSRSKDREDGEYRKR++RSS SPRRRDG EDR+E
Sbjct: 301 DREREGRERERRDRDR-GRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDGVEDREE 360

Query: 361 PKRKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 392
           PK+KKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 PKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 397

[Close]

BLAST of Cp4.1LG07g08760 vs. ExPASy TrEMBL
Match: A0A6J1G4M6 (Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111450740 PE=3 SV=1)

HSP 1 Score: 659 bits (1699), Expect = 1.15e-236
Identity = 366/400 (91.50%), Postives = 378/400 (94.50%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
           EPLYNDYRKLRR+LADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRW LESTGSLPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPARERNKDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKEDVEPIND+LED+IHEKNYYRGRSP RER++DRRRDSHRHRDRDY+
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240

Query: 241 RDRDYDRDYDRDWGRGRERDRDR----DRDRDRDRGRDRDRDRDRYRLRDDKEYSRDRDR 300
           RDRD DRDYDRD GRGRERDRDR    DRDRDRDR RDRDRDRDRY LRD+KEY RDRDR
Sbjct: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDR 300

Query: 301 EREGRERER----RDRDHHGRRRSHSRSRSRSKDREDGEYRKRNARSSASPRRRDGAEDR 360
           EREGRERER    RDRD  GRRRSHSRSRSRSKDREDGEYRKR+ RSS SPRRR+GAEDR
Sbjct: 301 EREGRERERERERRDRDR-GRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRNGAEDR 360

Query: 361 DEPKRKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 392
           +EPKRKKEKKEKK  GAGEEDPEIAEWNRIRASLG+APLK
Sbjct: 361 EEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 399

[Close]

BLAST of Cp4.1LG07g08760 vs. ExPASy TrEMBL
Match: A0A6J1KGY3 (Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111493773 PE=3 SV=1)

HSP 1 Score: 643 bits (1658), Expect = 1.50e-230
Identity = 356/396 (89.90%), Postives = 372/396 (93.94%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAK+IRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKNIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
           EPLYNDYRKLRR+LADGCFSLTH+DEVIDELLTKDYSCDIALPRVKKRW LES+GSLPAR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHMDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPAR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPARERNKDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKEDVEPIND+LE +IHEKNYYRGRSP RER++DRRRDSHRHRDRDY+
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDSLEGDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240

Query: 241 RDRDYDRDYDRDWGRGRERDRDRDRDRDRDRGRDRDRDRDRYRLRDDKEYSRDRDREREG 300
           RDRD DRD     GRGRERDRDR+RDRDRDR RDRDRDRDRY LRD+KEY RDRDREREG
Sbjct: 241 RDRDIDRDR----GRGRERDRDRERDRDRDRDRDRDRDRDRYHLRDEKEYGRDRDREREG 300

Query: 301 RERER----RDRDHHGRRRSHSRSRSRSKDREDGEYRKRNARSSASPRRRDGAEDRDEPK 360
           RERER    RDRD  GRRRSHSRSRSRSKDREDGEYRKR+ RSS SPRRR+G EDR+EPK
Sbjct: 301 RERERERERRDRDR-GRRRSHSRSRSRSKDREDGEYRKRHTRSSVSPRRRNGVEDREEPK 360

Query: 361 RKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 392
           RKKEKKEKK  GAGEEDPEIAEWNRIRASLG+APLK
Sbjct: 361 RKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 391

[Close]

BLAST of Cp4.1LG07g08760 vs. TAIR 10
Match: AT2G40650.1 (PRP38 family protein )

HSP 1 Score: 453.8 bits (1166), Expect = 1.5e-127
Identity = 268/395 (67.85%), Postives = 308/395 (77.97%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDP AK+IRGTNPQNLVEKI+R+KIYQ+T+WKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
            GG+RKPTPF+CL++KMLQIQPEKEIV+EFIKN+DYKYVR+LGAFYLRLTGTDVDVYRYL
Sbjct: 61  FGGSRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180
           EPLYNDYRK+R++L+DG FSLTHVDEVI+ELLTKDYSCDIA+PR+KKRW LE  G L  R
Sbjct: 121 EPLYNDYRKVRQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR 180

Query: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSP--ARERNKDRRRDSHRHRDRD 240
           KS LEDDFEEEEEKE+ E I D  EDE+ +    R +SP   RER++DRRRDSHRHRDRD
Sbjct: 181 KSVLEDDFEEEEEKEENEGIADGSEDEMDQ----RRKSPERERERDRDRRRDSHRHRDRD 240

Query: 241 YDRDRDYDRDYDRDWGRGRERDRDRDRDRDRDRGRDRDRDRDRYRLRDDKEYSRDRDRER 300
           YDRD D DRD+DRD+ R R   RDRDR+RDRD  R+RDRDR+           R RDRER
Sbjct: 241 YDRDYDMDRDHDRDYERERGHGRDRDRERDRDHYRERDRDRE-----------RGRDRER 300

Query: 301 EGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRNARSSASPRRRDGAEDRDEPKRK 360
           + R+R RR            RSRSRS+DR+  E               D   DR+EPK+K
Sbjct: 301 DRRDRARR------------RSRSRSRDRKRHE--------------TDDVRDREEPKKK 354

Query: 361 KEKKEK-KEGGAGEEDPEIAEWNRIRASLGLAPLK 393
           KEKKEK KE G    +PEIAE NR+RASLG+ PL+
Sbjct: 361 KEKKEKMKEDGTDHPNPEIAEMNRLRASLGMKPLR 354

[Close]

BLAST of Cp4.1LG07g08760 vs. TAIR 10
Match: AT5G37370.1 (PRP38 family protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.7e-06
Identity = 105/352 (29.83%), Postives = 164/352 (46.59%), Query Frame = 0


Query: 18  QNLVEKILRSKIYQNTYWKEQCFGL-TAETLVDKAM-ELDHLGGTHGGN-RKPTPFMCLV 77
           ++L+EK+L   I  + Y+KE  +GL T   ++D+   +++H+    GGN R P+   CL+
Sbjct: 12  ESLLEKVLSMNILSSDYFKE-LYGLKTYHEVIDEIYNQVNHVEPWMGGNCRGPSTAYCLL 71

Query: 78  MKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYLEPLYNDYRKLRRQL 137
            K   ++   + +   +K+ D  Y+R +G  YLR       ++ + EP    Y K   + 
Sbjct: 72  YKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYVADAKTLWTWYEP----YIKDDEEF 131

Query: 138 ADGCFS-LTHVDEVIDELLTKDYSCDIALPRV------KKRWNLESTGSLPARKSALEDD 197
           + G    +T +   + +LL   Y  D   PR+      +   NLE   +LP + S    D
Sbjct: 132 SPGSNGRMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQIVSNLEKM-NLPTKPSGSTGD 191

Query: 198 FEEEEEKEDVEP------INDALEDEIHEKNYYRGRSPAR-------ERN---KDRRRDS 257
                E     P      ++ +       +   RG SP R       +RN   + ++R  
Sbjct: 192 MTRGSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSP 251

Query: 258 HRHRDRDYDRDRDYDRDYDRDWGRGRERDRDRDRDRDRDRGRDRDRDRDRYRLRDDKEYS 317
            R + RDY  DRD D          R+R+R+R++DR+R+RGRDR R+R+R       +Y 
Sbjct: 252 RRSQSRDYYSDRDSD----------RQREREREKDRERERGRDRYRERER-------DYG 311

Query: 318 RDRDREREGRERERR-----DRDHHGRR-RSHSRSRSRSKDREDGEYRKRNA 338
            DR   R+   R RR     DR  H RR RS SRSRSRS   E     KR++
Sbjct: 312 NDRRSRRDYDSRSRRNDYEDDRSRHDRRSRSRSRSRSRSVQIEREPTPKRDS 340

[Close]

BLAST of Cp4.1LG07g08760 vs. TAIR 10
Match: AT5G37370.2 (PRP38 family protein )

HSP 1 Score: 48.1 bits (113), Expect = 1.8e-05
Identity = 99/345 (28.70%), Postives = 160/345 (46.38%), Query Frame = 0


Query: 18  QNLVEKILRSKIYQNTYWKEQCFGL-TAETLVDKAM-ELDHLGGTHGGN-RKPTPFMCLV 77
           ++L+EK+L   I  + Y+KE  +GL T   ++D+   +++H+    GGN R P+   CL+
Sbjct: 12  ESLLEKVLSMNILSSDYFKE-LYGLKTYHEVIDEIYNQVNHVEPWMGGNCRGPSTAYCLL 71

Query: 78  MKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYLEPLYNDYRKLRRQL 137
            K   ++   + +   +K+ D  Y+R +G  YLR       ++ + EP   D  +     
Sbjct: 72  YKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYVADAKTLWTWYEPYIKDDEEFSPG- 131

Query: 138 ADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPARKSALEDDFEEEEEK 197
           ++G  +   V    D L  +     I +P +++  +     +LP + S    D     E 
Sbjct: 132 SNGRMTTMGVYYYFDTLFPR-----IPVPVMRQIVSNLEKMNLPTKPSGSTGDMTRGSED 191

Query: 198 EDVEP------INDALEDEIHEKNYYRGRSPAR-------ERN---KDRRRDSHRHRDRD 257
               P      ++ +       +   RG SP R       +RN   + ++R   R + RD
Sbjct: 192 TARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRD 251

Query: 258 YDRDRDYDRDYDRDWGRGRERDRDRDRDRDRDRGRDRDRDRDRYRLRDDKEYSRDRDRER 317
           Y  DRD D          R+R+R+R++DR+R+RGRDR R+R+R       +Y  DR   R
Sbjct: 252 YYSDRDSD----------RQREREREKDRERERGRDRYRERER-------DYGNDRRSRR 311

Query: 318 EGRERERR-----DRDHHGRR-RSHSRSRSRSKDREDGEYRKRNA 338
           +   R RR     DR  H RR RS SRSRSRS   E     KR++
Sbjct: 312 DYDSRSRRNDYEDDRSRHDRRSRSRSRSRSRSVQIEREPTPKRDS 332

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g08760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB54	2.0e-126	67.85	Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana OX=3702 GN=PRP38 PE=1 SV=1	[more]
Q7JVL3	1.8e-66	52.45	Pre-mRNA-splicing factor 38 OS=Drosophila melanogaster OX=7227 GN=Prp38 PE=1 SV=...	[more]
Q0P5I6	3.2e-63	50.16	Pre-mRNA-splicing factor 38A OS=Bos taurus OX=9913 GN=PRPF38A PE=2 SV=1	[more]
Q8NAV1	3.2e-63	50.16	Pre-mRNA-splicing factor 38A OS=Homo sapiens OX=9606 GN=PRPF38A PE=1 SV=1	[more]
Q8HXH6	3.2e-63	50.16	Pre-mRNA-splicing factor 38A OS=Macaca fascicularis OX=9541 GN=PRPF38A PE=2 SV=1	[more]

BLAST of Cp4.1LG07g08760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537588.1	3.42e-264	100.00	pre-mRNA-splicing factor 38-like [Cucurbita pepo subsp. pepo]	[more]
KAG7021069.1	4.02e-256	96.76	Pre-mRNA-splicing factor 38 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022965789.1	2.74e-255	97.22	pre-mRNA-splicing factor 38-like [Cucurbita maxima] >XP_022965790.1 pre-mRNA-spl...	[more]
XP_022937574.1	4.51e-255	96.50	pre-mRNA-splicing factor 38-like [Cucurbita moschata] >XP_022937575.1 pre-mRNA-s...	[more]
KAG6586235.1	5.46e-254	96.51	Pre-mRNA-splicing factor 38, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG07g08760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HPQ9	1.32e-255	97.22	Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111465574 PE=3 SV=...	[more]
A0A6J1FBK8	2.18e-255	96.50	Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111443943 PE=3 S...	[more]
A0A1S3BXB0	9.58e-240	91.46	Pre-mRNA-splicing factor 38 OS=Cucumis melo OX=3656 GN=LOC103494470 PE=3 SV=1	[more]
A0A6J1G4M6	1.15e-236	91.50	Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111450740 PE=3 S...	[more]
A0A6J1KGY3	1.50e-230	89.90	Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111493773 PE=3 SV=...	[more]

BLAST of Cp4.1LG07g08760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40650.1	1.5e-127	67.85	PRP38 family protein	[more]
AT5G37370.1	1.7e-06	29.83	PRP38 family protein	[more]
AT5G37370.2	1.8e-05	28.70	PRP38 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005037	Pre-mRNA-splicing factor 38	PFAM	PF03371	PRP38	coord: 10..173 e-value: 2.2E-61 score: 206.8
IPR005037	Pre-mRNA-splicing factor 38	PANTHER	PTHR23142	UNCHARACTERIZED	coord: 1..385
IPR024767	Pre-mRNA-splicing factor 38, C-terminal	PFAM	PF12871	PRP38_assoc	coord: 180..273 e-value: 2.9E-7 score: 31.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..392
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 322..379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..241
None	No IPR available	PANTHER	PTHR23142:SF1	PRE-MRNA-SPLICING FACTOR 38A	coord: 1..385

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g08760.1	Cp4.1LG07g08760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071011	precatalytic spliceosome