Cp4.1LG07g07370 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g07370
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Auxin-responsive protein
Location	Cp4.1LG07: 6283519 .. 6285548 (-)
RNA-Seq Expression	Cp4.1LG07g07370
Synteny	Cp4.1LG07g07370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAACCCATTTCTTCATTTTCTCTCACAAACTAAACCCATGAACACCTTCCACTCTCACACACAATCCCCAGCCGCCGCCGCCGCCGCCGCCGAGTATTTCAAGATGAGGCGGTGGCCGGAGACCCAACTGGGTCCTCCTCCGCTGCAGCAGCAGCAGATGGAGGAGGAGGAGGAGGAGGAGGAGGATTTCGCGGCGGTGATTCCGCCCGTGACGGTGGTTCTTGAAGGGAGAGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTATGAGAGCCTTGCTAAGGCTCTTAGAAGGATGTTCGTTGACGACGATGACGGTGGCGGTGGCGAACCCTCCGGTGAACGGCAGCTGGACTTGGCTAACGCGGTTCCCGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCCGGTGATCTGAATTGGAAGTCAGTACTCTCAATTTCTCTGAATTTATTTATTTATTTATTATTTAAGAAAAAAAAATGGGATTTTTAGAATTAAAAATTTTATATAATACATTAACAAATTTTTATTTTAAAAAATTCTTAATTTTAACAAATTTGCTCTATTTATAGATGTGCTTTAAATTAGGGTAATCTAAGGAATTATTTGATAAAGGATTTAATTTTTTATTTTTAAAAACTCAGATGTTTGTTATAAAATTTCTTAATTCTTTTAGATTATTATTGAAATTTAATTTAAAATTTTAAAATACCTATAAAAACTAATAGAAACTACTCCAAATTCTAATTTTCACCTATATTATTCATAAAATAGTCTTATGGTTAGAAATTAGTAAGAGATTGAGGCCGTGAAACAAAGTCCAAAAAAGACCATATCTCCCCGTGGAGGGTCTTGTTACAAATGGTATCAGAGCATTGAGGAGGCTGTTTTCCAAAGGGTAGACACGAGGCAGTGTGCTAGGAAGGACACTGTCTCCAAAAGGGTGGATTTAGTACACGAGACAGTGTGCCAATAAGGACACTGTACCCTCGATTTAGTACACGAGGCAGTGTGCCAGTAAGGACACTGTCCCCCAAGGGGGTGGATTTAGTACACGAGGCAGCGTGCCATGTCCCGTGCCAGTAAGGACACTGGCCCCAAAGGGGATGGATTTAATGGGGTCTCACATCGATTGGAGAAAGAAACGAGTGCTAGCGAGGGGTGAGCTCTGAAGAGGGTGGATTGTAATGTCGCACATTGGTTGGGGAGGAGAATAAAACATCCTCTATAGGGGTGTGAAAATCTTTCCTAGCAAATCCAAAGACAACAATATCTGCGAGTACCTTTCCTAGCCAATCCAAAGACAACAATATCTGCGAGTGGTGGGCCTGGGTCGTTATTAGAGCATCGAGTAGGCTGTTCCCCAAAGAGGGTAGACACGAGGCAGTGTACAAGTAAAGACGCTGGTCCCAAAAGGGGTGAAATTTGGTGGGAGTCCCACATCGATTGGAGAAAAGAGTGCGAGCGAGGACGCTGAGCCCCGAAAGGGTGGATTGTGATGTCTCACATTTATAAGAGTGTGAAAACCTTCCCCTACCCAACCGTTTTAAAGCGTTCTCGAAAGGGAAAGCCAAAAAGTACAATATCTCCTAGCAGTGGACCTAAGCCGTTACAATATCAATAATGTCGTTTTTTTGTGTTTAAACGACTATGTGAATGAAGTACGGGTTGAAAATTGGCTAATTAATGCAACTTCTTCGTCTTAATCTACAAAATCTCGACCCTTTTATCGACACATGGATAGCTAATTATCACATAAATTGATTAATTTAAAAATAATGTAAATAAAGAGAATAATTAATAACATGAAATTTATGTGTGTGTGTGACAGTGATTTCGTGCGGGTGGCGAAGAGAATTCGAATACTTCCAATAAAAGCAAATTCAAGGAGGGGAAGAGGAAATAATTAAATTATATATTTTATGACAAACCCATCTCTATTATTTAAATATTATCTTATATAATTATCATTTCTTTCATAAAATATGAAAGAAAATAATAATATCT

mRNA sequence

CGAACCCATTTCTTCATTTTCTCTCACAAACTAAACCCATGAACACCTTCCACTCTCACACACAATCCCCAGCCGCCGCCGCCGCCGCCGCCGAGTATTTCAAGATGAGGCGGTGGCCGGAGACCCAACTGGGTCCTCCTCCGCTGCAGCAGCAGCAGATGGAGGAGGAGGAGGAGGAGGAGGAGGATTTCGCGGCGGTGATTCCGCCCGTGACGGTGGTTCTTGAAGGGAGAGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTATGAGAGCCTTGCTAAGGCTCTTAGAAGGATGTTCGTTGACGACGATGACGGTGGCGGTGGCGAACCCTCCGGTGAACGGCAGCTGGACTTGGCTAACGCGGTTCCCGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCCGGTGATCTGAATTGGAATGATTTCGTGCGGGTGGCGAAGAGAATTCGAATACTTCCAATAAAAGCAAATTCAAGGAGGGGAAGAGGAAATAATTAAATTATATATTTTATGACAAACCCATCTCTATTATTTAAATATTATCTTATATAATTATCATTTCTTTCATAAAATATGAAAGAAAATAATAATATCT

Coding sequence (CDS)

ATGAACACCTTCCACTCTCACACACAATCCCCAGCCGCCGCCGCCGCCGCCGCCGAGTATTTCAAGATGAGGCGGTGGCCGGAGACCCAACTGGGTCCTCCTCCGCTGCAGCAGCAGCAGATGGAGGAGGAGGAGGAGGAGGAGGAGGATTTCGCGGCGGTGATTCCGCCCGTGACGGTGGTTCTTGAAGGGAGAGCGATCTGCCAGCGGATCAGCCTCCACAAACATGCAAGCTATGAGAGCCTTGCTAAGGCTCTTAGAAGGATGTTCGTTGACGACGATGACGGTGGCGGTGGCGAACCCTCCGGTGAACGGCAGCTGGACTTGGCTAACGCGGTTCCCGGTCATCTTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCCGGTGATCTGAATTGGAATGATTTCGTGCGGGTGGCGAAGAGAATTCGAATACTTCCAATAAAAGCAAATTCAAGGAGGGGAAGAGGAAATAATTAA

Protein sequence

MNTFHSHTQSPAAAAAAAEYFKMRRWPETQLGPPPLQQQQMEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN

Homology

[Close]

BLAST of Cp4.1LG07g07370 vs. ExPASy Swiss-Prot
Match: Q9FKM7 (Auxin-responsive protein IAA33 OS=Arabidopsis thaliana OX=3702 GN=IAA33 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 8.9e-36
Identity = 75/114 (65.79%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 47  EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQ 106
           E++  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD  D           
Sbjct: 64  EDDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLASALRQMFVDGAD-------STDD 123

Query: 107 LDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 161
           LDL+NA+PGHL+AYED+ENDLLLAGDL W DFVRVAKRIRILP+K N+R+ + N
Sbjct: 124 LDLSNAIPGHLIAYEDMENDLLLAGDLTWKDFVRVAKRIRILPVKGNTRQVKRN 170

[Close]

BLAST of Cp4.1LG07g07370 vs. ExPASy Swiss-Prot
Match: Q6K846 (Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA9 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.8e-10
Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 58  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQLDLANAVPGHL 117
           V V  EG AI +++ L  H+SY+ LA  L RMF  +D  G  + + +   D A    G +
Sbjct: 95  VKVKKEGDAIGRKVDLALHSSYDELAATLARMFPTNDHQGEKKMANDDHGDAA----GPV 154

Query: 118 VAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 149
           V YED + D +L GD+ W+DF R  KR++IL
Sbjct: 155 VTYEDGDGDWMLVGDVPWDDFARSVKRLKIL 181

[Close]

BLAST of Cp4.1LG07g07370 vs. ExPASy Swiss-Prot
Match: Q38831 (Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 2.7e-08
Identity = 32/92 (34.78%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 58  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSG-ERQLDLANAVPGH 117
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G  S   + L L +     
Sbjct: 132 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEF 191

Query: 118 LVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 149
           ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 192 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 223

[Close]

BLAST of Cp4.1LG07g07370 vs. ExPASy Swiss-Prot
Match: Q69VE0 (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA23 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.9e-08
Identity = 38/121 (31.40%), Postives = 60/121 (49.59%), Query Frame = 0


Query: 31  LGPPPLQQQQMEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMF 90
           +G PP++  +     E+    +A    V V ++G    +++ L  HA Y  L +AL  MF
Sbjct: 63  VGWPPVRAYRRNALRED----SARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMF 122

Query: 91  VD---DDDGGGGEPSGERQLDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRI 149
                   GGGG+  G + +DL      ++  YED + D +L GD+ W  FV   KRIR+
Sbjct: 123 ASCLAVRGGGGGDGEGTKLVDLVTGAE-YVPTYEDKDGDWMLVGDVPWKMFVESCKRIRL 178

[Close]

BLAST of Cp4.1LG07g07370 vs. ExPASy Swiss-Prot
Match: P0C128 (Auxin-responsive protein IAA25 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA25 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.0e-07
Identity = 33/90 (36.67%), Postives = 48/90 (53.33%), Query Frame = 0


Query: 58  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQLDLANAVPGHL 117
           V V LEG A+ ++I L  H SY+SL++AL+ MF      G      E Q     +   ++
Sbjct: 146 VKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKRYV 205

Query: 118 VAYEDIENDLLLAGDLNWNDFVRVAKRIRI 148
           + YED E D +L GD+ W  F+   KR+ I
Sbjct: 206 LVYEDNEGDRMLVGDVPWELFIASVKRLYI 235

[Close]

BLAST of Cp4.1LG07g07370 vs. NCBI nr
Match: XP_023538318.1 (auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320 bits (821), Expect = 2.45e-110
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MNTFHSHTQSPAAAAAAAEYFKMRRWPETQLGPPPLQQQQMEEEEEEEEDFAAVIPPVTV 60
           MNTFHSHTQSPAAAAAAAEYFKMRRWPETQLGPPPLQQQQMEEEEEEEEDFAAVIPPVTV
Sbjct: 1   MNTFHSHTQSPAAAAAAAEYFKMRRWPETQLGPPPLQQQQMEEEEEEEEDFAAVIPPVTV 60

Query: 61  VLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQLDLANAVPGHLVAY 120
           VLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQLDLANAVPGHLVAY
Sbjct: 61  VLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQLDLANAVPGHLVAY 120

Query: 121 EDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN 161
           EDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN
Sbjct: 121 EDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN 161

[Close]

BLAST of Cp4.1LG07g07370 vs. NCBI nr
Match: KAG6586078.1 (Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 300 bits (768), Expect = 3.77e-102
Identity = 158/168 (94.05%), Postives = 159/168 (94.64%), Query Frame = 0


Query: 1   MNTFHSHTQSPAAAAAAA-EYFKMRRWPETQLGPPPLQQQQME-EEEEEEEDFAAVIPPV 60
           MNTFHSHTQSPAAAAAAA EYFKMRRWPETQLGPPPLQQQQ   EEEEEEEDFAAVIPPV
Sbjct: 1   MNTFHSHTQSPAAAAAAAAEYFKMRRWPETQLGPPPLQQQQQRMEEEEEEEDFAAVIPPV 60

Query: 61  TVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG-----GGEPSGERQLDLANAV 120
           TVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG     GGEPSG+RQLDLANAV
Sbjct: 61  TVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSGDRQLDLANAV 120

Query: 121 PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN 161
           PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN
Sbjct: 121 PGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN 168

[Close]

BLAST of Cp4.1LG07g07370 vs. NCBI nr
Match: XP_022938283.1 (auxin-responsive protein IAA33 [Cucurbita moschata])

HSP 1 Score: 289 bits (739), Expect = 9.60e-98
Identity = 154/170 (90.59%), Postives = 155/170 (91.18%), Query Frame = 0


Query: 1   MNTFHSHTQSPAAAAAAAEYFKMRRWPETQLGPPPLQQQQM----EEEEEEEEDFAAVIP 60
           MNTFHSHTQSPAAAA   EYFKMRRWPETQLG PPLQQQQ     EEEEEEEEDFAAVIP
Sbjct: 1   MNTFHSHTQSPAAAA---EYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIP 60

Query: 61  PVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG-----GGEPSGERQLDLAN 120
           PVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG     GGEPS +RQLDLAN
Sbjct: 61  PVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLAN 120

Query: 121 AVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN 161
           AVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN
Sbjct: 121 AVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN 167

[Close]

BLAST of Cp4.1LG07g07370 vs. NCBI nr
Match: XP_022969694.1 (auxin-responsive protein IAA33 [Cucurbita maxima])

HSP 1 Score: 286 bits (731), Expect = 1.44e-96
Identity = 153/167 (91.62%), Postives = 156/167 (93.41%), Query Frame = 0


Query: 1   MNTFHSHTQSPAAAAAAAEYFKMRRWPETQLGPPP-LQQQQMEEEEEEEEDFAAVIPPVT 60
           MNTFHSHTQSPAAAAAA EYFKMRRWPETQLGPPP LQQQQ  ++ EEEEDFAAVIPPVT
Sbjct: 1   MNTFHSHTQSPAAAAAA-EYFKMRRWPETQLGPPPPLQQQQ--QQMEEEEDFAAVIPPVT 60

Query: 61  VVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG-----GGEPSGERQLDLANAVP 120
           VVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG     GGEPSG+RQLDLANAVP
Sbjct: 61  VVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGSGGGGEPSGDRQLDLANAVP 120

Query: 121 GHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN 161
           GHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRR RGNN
Sbjct: 121 GHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRRRGNN 164

[Close]

BLAST of Cp4.1LG07g07370 vs. NCBI nr
Match: XP_038890972.1 (auxin-responsive protein IAA33 [Benincasa hispida])

HSP 1 Score: 251 bits (641), Expect = 5.70e-83
Identity = 132/162 (81.48%), Postives = 139/162 (85.80%), Query Frame = 0


Query: 1   MNTFHSHTQSPAAAAAAAEYFKMRRWPETQLGPPPLQQQQMEEEEEEEEDFAAVIPPVTV 60
           MN F S T    AAAAAAE FKMRRWPE ++GPP       + E E EEDFAAVIPPVTV
Sbjct: 1   MNAFQSRTTQSPAAAAAAECFKMRRWPERRVGPP------QQAEGEGEEDFAAVIPPVTV 60

Query: 61  VLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGG--EPSGERQLDLANAVPGHLV 120
           VLEGRAICQRISLHKHASYESLAKALRRMFVDD+DGGGG  E SGERQLDL NAVPGH+V
Sbjct: 61  VLEGRAICQRISLHKHASYESLAKALRRMFVDDEDGGGGGGENSGERQLDLTNAVPGHIV 120

Query: 121 AYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 160
           AYEDIENDLLLAGDLNWNDFVRVAKRIRI+P+KANSRRGRGN
Sbjct: 121 AYEDIENDLLLAGDLNWNDFVRVAKRIRIMPVKANSRRGRGN 156

[Close]

BLAST of Cp4.1LG07g07370 vs. ExPASy TrEMBL
Match: A0A6J1FIF6 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111444417 PE=3 SV=1)

HSP 1 Score: 289 bits (739), Expect = 4.65e-98
Identity = 154/170 (90.59%), Postives = 155/170 (91.18%), Query Frame = 0


Query: 1   MNTFHSHTQSPAAAAAAAEYFKMRRWPETQLGPPPLQQQQM----EEEEEEEEDFAAVIP 60
           MNTFHSHTQSPAAAA   EYFKMRRWPETQLG PPLQQQQ     EEEEEEEEDFAAVIP
Sbjct: 1   MNTFHSHTQSPAAAA---EYFKMRRWPETQLGSPPLQQQQQQMEEEEEEEEEEDFAAVIP 60

Query: 61  PVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG-----GGEPSGERQLDLAN 120
           PVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG     GGEPS +RQLDLAN
Sbjct: 61  PVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGGGGGGEPSCDRQLDLAN 120

Query: 121 AVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN 161
           AVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN
Sbjct: 121 AVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN 167

[Close]

BLAST of Cp4.1LG07g07370 vs. ExPASy TrEMBL
Match: A0A6J1I3D9 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111468644 PE=3 SV=1)

HSP 1 Score: 286 bits (731), Expect = 6.95e-97
Identity = 153/167 (91.62%), Postives = 156/167 (93.41%), Query Frame = 0


Query: 1   MNTFHSHTQSPAAAAAAAEYFKMRRWPETQLGPPP-LQQQQMEEEEEEEEDFAAVIPPVT 60
           MNTFHSHTQSPAAAAAA EYFKMRRWPETQLGPPP LQQQQ  ++ EEEEDFAAVIPPVT
Sbjct: 1   MNTFHSHTQSPAAAAAA-EYFKMRRWPETQLGPPPPLQQQQ--QQMEEEEDFAAVIPPVT 60

Query: 61  VVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG-----GGEPSGERQLDLANAVP 120
           VVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGG     GGEPSG+RQLDLANAVP
Sbjct: 61  VVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGCGSGGGGEPSGDRQLDLANAVP 120

Query: 121 GHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGNN 161
           GHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRR RGNN
Sbjct: 121 GHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRRRGNN 164

[Close]

BLAST of Cp4.1LG07g07370 vs. ExPASy TrEMBL
Match: A0A1S3BRI6 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103492920 PE=3 SV=1)

HSP 1 Score: 229 bits (583), Expect = 1.23e-74
Identity = 122/153 (79.74%), Postives = 131/153 (85.62%), Query Frame = 0


Query: 8   TQSPAAAAAAAEYFKMRRWPETQLGPPPLQQQQMEEEEEEEEDFAAVIPPVTVVLEGRAI 67
           TQSPAAAAAA EYFKM RW E ++GPP          ++ EEDF+AVIPPVTVVLEGRAI
Sbjct: 4   TQSPAAAAAA-EYFKMARWAERRVGPP----------QQAEEDFSAVIPPVTVVLEGRAI 63

Query: 68  CQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQLDLANAVPGHLVAYEDIENDL 127
           CQRISLHKH SYESLAKALRRMFVDDDD G  E SGER+LDL NAVPG++VAYEDIENDL
Sbjct: 64  CQRISLHKHGSYESLAKALRRMFVDDDDEG--EESGERRLDLTNAVPGYIVAYEDIENDL 123

Query: 128 LLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 160
           LLAGDLNWNDFVRVAKRIRILP+KANSRRGR N
Sbjct: 124 LLAGDLNWNDFVRVAKRIRILPVKANSRRGRAN 143

[Close]

BLAST of Cp4.1LG07g07370 vs. ExPASy TrEMBL
Match: A0A0A0LH98 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G059200 PE=3 SV=1)

HSP 1 Score: 226 bits (575), Expect = 2.10e-73
Identity = 121/153 (79.08%), Postives = 129/153 (84.31%), Query Frame = 0


Query: 8   TQSPAAAAAAAEYFKMRRWPETQLGPPPLQQQQMEEEEEEEEDFAAVIPPVTVVLEGRAI 67
           TQSPAAAAAA EYFKM RW + ++ PP          ++ EEDFAAVIPPVTVVLEGRAI
Sbjct: 4   TQSPAAAAAA-EYFKMTRWADRRVSPP----------QQAEEDFAAVIPPVTVVLEGRAI 63

Query: 68  CQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQLDLANAVPGHLVAYEDIENDL 127
           CQRISLHKH SYESLAKALRRMFVDDDD  G E SGER LDL NAVPG++VAYEDIENDL
Sbjct: 64  CQRISLHKHGSYESLAKALRRMFVDDDDNDG-EDSGERGLDLTNAVPGYIVAYEDIENDL 123

Query: 128 LLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 160
           LLAGDLNWNDFVRVAKRIRILP+KANSRRGR N
Sbjct: 124 LLAGDLNWNDFVRVAKRIRILPVKANSRRGRAN 144

[Close]

BLAST of Cp4.1LG07g07370 vs. ExPASy TrEMBL
Match: A0A6J1DKE3 (Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111020871 PE=3 SV=1)

HSP 1 Score: 208 bits (530), Expect = 1.70e-66
Identity = 112/145 (77.24%), Postives = 119/145 (82.07%), Query Frame = 0


Query: 16  AAAEYFKMRRWPETQLGPPPLQQQQMEEEEEEEEDFAAVIPPVTVVLEGRAICQRISLHK 75
           AAAEY K RRWPE +                 EED +AVIP VTVVLEGRAICQRISLHK
Sbjct: 13  AAAEYLKKRRWPERRAVAA-------------EEDVSAVIPAVTVVLEGRAICQRISLHK 72

Query: 76  HASYESLAKALRRMFVDDDDGGGGEP-SGERQLDLANAVPGHLVAYEDIENDLLLAGDLN 135
           HASYESLAKALR MFV +DDGGGG+  SGER+LDL+NAVPGHLVAYEDIENDLLLAGDLN
Sbjct: 73  HASYESLAKALRGMFVPEDDGGGGDSGSGERRLDLSNAVPGHLVAYEDIENDLLLAGDLN 132

Query: 136 WNDFVRVAKRIRILPIKANSRRGRG 159
           WNDFVRVAKRIRILP+KANSRRGRG
Sbjct: 133 WNDFVRVAKRIRILPVKANSRRGRG 144

[Close]

BLAST of Cp4.1LG07g07370 vs. TAIR 10
Match: AT5G57420.1 (indole-3-acetic acid inducible 33 )

HSP 1 Score: 151.4 bits (381), Expect = 6.3e-37
Identity = 75/114 (65.79%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 47  EEEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGERQ 106
           E++  ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD  D           
Sbjct: 64  EDDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLASALRQMFVDGAD-------STDD 123

Query: 107 LDLANAVPGHLVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPIKANSRRGRGN 161
           LDL+NA+PGHL+AYED+ENDLLLAGDL W DFVRVAKRIRILP+K N+R+ + N
Sbjct: 124 LDLSNAIPGHLIAYEDMENDLLLAGDLTWKDFVRVAKRIRILPVKGNTRQVKRN 170

[Close]

BLAST of Cp4.1LG07g07370 vs. TAIR 10
Match: AT2G33310.1 (auxin-induced protein 13 )

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-09
Identity = 32/92 (34.78%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 58  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSG-ERQLDLANAVPGH 117
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G  S   + L L +     
Sbjct: 131 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEF 190

Query: 118 LVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 149
           ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 191 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 222

[Close]

BLAST of Cp4.1LG07g07370 vs. TAIR 10
Match: AT2G33310.2 (auxin-induced protein 13 )

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-09
Identity = 32/92 (34.78%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 58  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSG-ERQLDLANAVPGH 117
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G  S   + L L +     
Sbjct: 132 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEF 191

Query: 118 LVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 149
           ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 192 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 223

[Close]

BLAST of Cp4.1LG07g07370 vs. TAIR 10
Match: AT2G33310.3 (auxin-induced protein 13 )

HSP 1 Score: 60.1 bits (144), Expect = 1.9e-09
Identity = 32/92 (34.78%), Postives = 53/92 (57.61%), Query Frame = 0


Query: 58  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSG-ERQLDLANAVPGH 117
           + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G  G  S   + L L +     
Sbjct: 131 IKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPGTVGLTSQFTKPLRLLDGSSEF 190

Query: 118 LVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 149
           ++ YED E D +L GD+ W  F+   KR+R++
Sbjct: 191 VLTYEDKEGDWMLVGDVPWRMFINSVKRLRVM 222

[Close]

BLAST of Cp4.1LG07g07370 vs. TAIR 10
Match: AT1G04550.2 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 56.2 bits (134), Expect = 2.8e-08
Identity = 32/93 (34.41%), Postives = 50/93 (53.76%), Query Frame = 0


Query: 58  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGGGGEPSGE--RQLDLANAVPG 117
           V V ++G  I +++ +  H+SYE+LA+ L  MF     G  G    E  + L L +    
Sbjct: 127 VKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFF----GMTGTTCREKVKPLRLLDGSSD 186

Query: 118 HLVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL 149
            ++ YED E D +L GD+ W  F+   KR+RI+
Sbjct: 187 FVLTYEDKEGDWMLVGDVPWRMFINSVKRLRIM 215

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g07370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKM7	8.9e-36	65.79	Auxin-responsive protein IAA33 OS=Arabidopsis thaliana OX=3702 GN=IAA33 PE=1 SV=...	[more]
Q6K846	3.8e-10	40.66	Auxin-responsive protein IAA9 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA9 P...	[more]
Q38831	2.7e-08	34.78	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana OX=3702 GN=IAA13 PE=1 SV=...	[more]
Q69VE0	7.9e-08	31.40	Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA23...	[more]
P0C128	3.0e-07	36.67	Auxin-responsive protein IAA25 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA25...	[more]

BLAST of Cp4.1LG07g07370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538318.1	2.45e-110	100.00	auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo]	[more]
KAG6586078.1	3.77e-102	94.05	Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022938283.1	9.60e-98	90.59	auxin-responsive protein IAA33 [Cucurbita moschata]	[more]
XP_022969694.1	1.44e-96	91.62	auxin-responsive protein IAA33 [Cucurbita maxima]	[more]
XP_038890972.1	5.70e-83	81.48	auxin-responsive protein IAA33 [Benincasa hispida]	[more]

BLAST of Cp4.1LG07g07370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FIF6	4.65e-98	90.59	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111444417 PE=3 SV=1	[more]
A0A6J1I3D9	6.95e-97	91.62	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111468644 PE=3 SV=1	[more]
A0A1S3BRI6	1.23e-74	79.74	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103492920 PE=3 SV=1	[more]
A0A0A0LH98	2.10e-73	79.08	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G059200 PE=3 SV=1	[more]
A0A6J1DKE3	1.70e-66	77.24	Auxin-responsive protein OS=Momordica charantia OX=3673 GN=LOC111020871 PE=3 SV=...	[more]

BLAST of Cp4.1LG07g07370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57420.1	6.3e-37	65.79	indole-3-acetic acid inducible 33	[more]
AT2G33310.1	1.9e-09	34.78	auxin-induced protein 13	[more]
AT2G33310.2	1.9e-09	34.78	auxin-induced protein 13	[more]
AT2G33310.3	1.9e-09	34.78	auxin-induced protein 13	[more]
AT1G04550.2	2.8e-08	34.41	AUX/IAA transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 39..148 e-value: 8.2E-15 score: 55.3
None	No IPR available	GENE3D	3.10.20.90		coord: 55..158 e-value: 1.4E-19 score: 71.9
None	No IPR available	PANTHER	PTHR31734:SF7	AUXIN-RESPONSIVE PROTEIN IAA33	coord: 42..157
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 42..157
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 55..152 score: 15.005116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g07370.1	Cp4.1LG07g07370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding