Cp4.1LG07g06710 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g06710
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	LEA_2 domain-containing protein
Location	Cp4.1LG07: 5490603 .. 5492414 (+)
RNA-Seq Expression	Cp4.1LG07g06710
Synteny	Cp4.1LG07g06710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAAAACAAAAGTGAAAGAGACAGAGACACAACCAAGCCAAAACAAATCCCCCTCAACAACATGAGCTCCACTACTAACCAACCAGATCAATCATCATCATCATCATCCACCATTGTCCAGCCACCAAAACGAGGTAGCTCCAATGGGCAGCATAGGACAACAAACCGGACAAGGCTATTGAGAATCATAGGAAGAAGCATGTTGGGCTTAATGGTCCTTGTCGGGCTTGCACTAGTTACTTGTTGGCTTGTTGTGACCCCCAAGAAACCAGTTTTCAGCTTGGAAAGAGGCGTTGTTACACTCCATAGTTTAACCGACAGGAAGCTCAATGCCTCCGTTTCTTTCCACATTAGAAGCTTCAACCCCAACAAGAAAGCCGCCATCCACATTGATTATATGACGATGACAATCAATGAGATGGGCAGGATGTTCGAGATGGTCGTGTGCAACTTCTCCCAGGTGCCGGGAAACCTAACCGTCTTGTCCCCGACCATTCCTATCGACTTCGTATACCCATTGCCTCGGTTGCAAGAGAAGGTGAAGTTTGATGGGATCAGTCCCGAGCTTCAATTGTCGGCAAACATCAGGTATAAACATTCGACTTATGTTCCTTGTACTCCACGATTTCAAATTATATTTTACTTTCAAATACTTATCTTCTCCTCCCCAACGGATGGAGGATTATTGAAAGTGAGTCTCACATTGGTTAATTTAGTGGAAGATTATGGGTTTATAAGTGTGGAATACTATCTCCATTGGTACAAGTCATTTTGGGAAAGCCCAAAACAAAGCCATGAGAGCTTACGCTCAAACGGACAATATCATACCATTGTGGAGATCCGTGATTCCTAACACGGATGTGTGATCTCATAATCTAGCTCCGATCTCCTCAAAGTTTTTAAAATGCGATTGTCTCTTTGAGCTCTCCCGAGTGTTTCGTTCTCCTCCTCCCCAATTGGTGGCACATCACCTCATGTTACCTGTCTTTGTGGTTCAATCTTCTTGCTGGGATATCGCCCAATGTCTAGCTCCGATACCATTTGTAACTGCTCAAACCTATACTCGTAGATATTGTCCTCCACCCCTTTCGGGGCCCAACACCTTGCTGGTGGCACATCGCTTCATGTCCACTTGCCTTTGTGGCTCAACCTCCTTGCTGGCACATCACCCGATGTCTAGCTCCGATACCATTTGTAACTACCAAGCCTACACTAGCAGATATTGTCCTCTTCGGACTTTCTCTTTCGGGCTTACTTTGATTCCATTTGTAAATGCCCAAACCTACCGCTAGTAGATATTGCTTTCTTTAAACTTTTTCTTTCGAGTTTTCCCTTAAAGTTTTTAAAACGCATCTGCTACGGAGAGGTTTCCACACCCTTATAAATGGTGTTTCGTTCTCCTCACCCACCGATGTTGGATCTCACAAACTTGGTCAGATTTAGCCTAATTTAATACAATTTTAACCTAAATTATAATTTTCTCTCTAAATTAATTAATTTAAAAATACAATATATGACAAATTTATAACATTTTCCCAACTTTCTTGATTCAAATTAGCTTATACTTAAATTATAATTTTCTTTCTAAACTTCTAAATTGAGTTCGTATAAAAGAAACATGACGAAATGTAAAATTTTGTCTTTTTCTAAGAATTTATGGTCTTGTCTCTATTAGATACATTATTAATGGATGGATATCAAAACGTCGATCGATGGAGATCTATTGTAATCGTCATATGCTTAAGATCAATGGTTCGACACCTTTGGATAATATCAAATGCAATGTGGATCTTTGAGATTTGATCAGGC

mRNA sequence

AAAAGAAAACAAAAGTGAAAGAGACAGAGACACAACCAAGCCAAAACAAATCCCCCTCAACAACATGAGCTCCACTACTAACCAACCAGATCAATCATCATCATCATCATCCACCATTGTCCAGCCACCAAAACGAGGTAGCTCCAATGGGCAGCATAGGACAACAAACCGGACAAGGCTATTGAGAATCATAGGAAGAAGCATGTTGGGCTTAATGGTCCTTGTCGGGCTTGCACTAGTTACTTGTTGGCTTGTTGTGACCCCCAAGAAACCAGTTTTCAGCTTGGAAAGAGGCGTTGTTACACTCCATAGTTTAACCGACAGGAAGCTCAATGCCTCCGTTTCTTTCCACATTAGAAGCTTCAACCCCAACAAGAAAGCCGCCATCCACATTGATTATATGACGATGACAATCAATGAGATGGGCAGGATGTTCGAGATGGTCGTGTGCAACTTCTCCCAGGTGCCGGGAAACCTAACCGTCTTGTCCCCGACCATTCCTATCGACTTCGTATACCCATTGCCTCGGTTGCAAGAGAAGGTGAAGTTTGATGGGATCAGTCCCGAGCTTCAATTGTCGGCAAACATCAGATACATTATTAATGGATGGATATCAAAACGTCGATCGATGGAGATCTATTGTAATCGTCATATGCTTAAGATCAATGGTTCGACACCTTTGGATAATATCAAATGCAATGTGGATCTTTGAGATTTGATCAGGC

Coding sequence (CDS)

ATGAGCTCCACTACTAACCAACCAGATCAATCATCATCATCATCATCCACCATTGTCCAGCCACCAAAACGAGGTAGCTCCAATGGGCAGCATAGGACAACAAACCGGACAAGGCTATTGAGAATCATAGGAAGAAGCATGTTGGGCTTAATGGTCCTTGTCGGGCTTGCACTAGTTACTTGTTGGCTTGTTGTGACCCCCAAGAAACCAGTTTTCAGCTTGGAAAGAGGCGTTGTTACACTCCATAGTTTAACCGACAGGAAGCTCAATGCCTCCGTTTCTTTCCACATTAGAAGCTTCAACCCCAACAAGAAAGCCGCCATCCACATTGATTATATGACGATGACAATCAATGAGATGGGCAGGATGTTCGAGATGGTCGTGTGCAACTTCTCCCAGGTGCCGGGAAACCTAACCGTCTTGTCCCCGACCATTCCTATCGACTTCGTATACCCATTGCCTCGGTTGCAAGAGAAGGTGAAGTTTGATGGGATCAGTCCCGAGCTTCAATTGTCGGCAAACATCAGATACATTATTAATGGATGGATATCAAAACGTCGATCGATGGAGATCTATTGTAATCGTCATATGCTTAAGATCAATGGTTCGACACCTTTGGATAATATCAAATGCAATGTGGATCTTTGA

Protein sequence

MSSTTNQPDQSSSSSSTIVQPPKRGSSNGQHRTTNRTRLLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYMTMTINEMGRMFEMVVCNFSQVPGNLTVLSPTIPIDFVYPLPRLQEKVKFDGISPELQLSANIRYIINGWISKRRSMEIYCNRHMLKINGSTPLDNIKCNVDL

Homology

[Close]

BLAST of Cp4.1LG07g06710 vs. ExPASy Swiss-Prot
Match: Q8VZ13 (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.2e-05
Identity = 46/173 (26.59%), Postives = 84/173 (48.55%), Query Frame = 0


Query: 42  IIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSL--TDRKLNASVSFHIRS 101
           I+   +LGL  LVGLA++  +L + PK+ ++++E   V   ++   D  +NA  S+ I+S
Sbjct: 41  IVALVLLGL--LVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKS 100

Query: 102 FNPNKKAAIHIDYMTM-TINEMGRMFEMVVCNFSQVPGNLT-----VLSPTIPIDFVYPL 161
           +NP K  ++    M + T +    +    +  F Q P N T     ++S  + +      
Sbjct: 101 YNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNAR 160

Query: 162 PRLQEKVKFDGISPELQLSANIRYIINGWI--SKRRSMEIYCNRHMLKINGST 205
               EK K   I  E+ ++A + Y    WI  S+RR+++  C   M+ +  S+
Sbjct: 161 DLRAEKSK-GTIEMEVYITARVSY--KTWIFRSRRRTLKAVCTPVMINVTSSS 208

[Close]

BLAST of Cp4.1LG07g06710 vs. NCBI nr
Match: XP_023537505.1 (uncharacterized protein LOC111798522 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 421 bits (1081), Expect = 3.38e-148
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MSSTTNQPDQSSSSSSTIVQPPKRGSSNGQHRTTNRTRLLRIIGRSMLGLMVLVGLALVT 60
           MSSTTNQPDQSSSSSSTIVQPPKRGSSNGQHRTTNRTRLLRIIGRSMLGLMVLVGLALVT
Sbjct: 1   MSSTTNQPDQSSSSSSTIVQPPKRGSSNGQHRTTNRTRLLRIIGRSMLGLMVLVGLALVT 60

Query: 61  CWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYMTMTINEM 120
           CWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYMTMTINEM
Sbjct: 61  CWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYMTMTINEM 120

Query: 121 GRMFEMVVCNFSQVPGNLTVLSPTIPIDFVYPLPRLQEKVKFDGISPELQLSANIRYIIN 180
           GRMFEMVVCNFSQVPGNLTVLSPTIPIDFVYPLPRLQEKVKFDGISPELQLSANIRYIIN
Sbjct: 121 GRMFEMVVCNFSQVPGNLTVLSPTIPIDFVYPLPRLQEKVKFDGISPELQLSANIRYIIN 180

Query: 181 GWISKRRSMEIYCNRHMLKINGSTPLDNIKCNVDL 215
           GWISKRRSMEIYCNRHMLKINGSTPLDNIKCNVDL
Sbjct: 181 GWISKRRSMEIYCNRHMLKINGSTPLDNIKCNVDL 215

[Close]

BLAST of Cp4.1LG07g06710 vs. NCBI nr
Match: XP_022937554.1 (uncharacterized protein LOC111443928 [Cucurbita moschata])

HSP 1 Score: 393 bits (1010), Expect = 2.26e-137
Identity = 203/215 (94.42%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 1   MSSTTNQPDQSSSSSSTIVQPPKRGSSNGQHRTTNRTRLLRIIGRSMLGLMVLVGLALVT 60
           MSSTTNQPDQ+SSSSST VQPPKR SS GQHRTTNRTR+LRIIGRSMLGLMVLVGLALVT
Sbjct: 1   MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVT 60

Query: 61  CWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYMTMTINEM 120
           CWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYM MTINEM
Sbjct: 61  CWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYMMMTINEM 120

Query: 121 GRMFEMVVCNFSQVPGNLTVLSPTIPIDFVYPLPRLQEKVKFDGISPELQLSANIRYIIN 180
           GR FEMV+ NFSQVPGNL VLSPTIPIDFVYPLPRLQEKVKFDGISPEL LSANIRYIIN
Sbjct: 121 GRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIIN 180

Query: 181 GWISKRRSMEIYCNRHMLKINGSTPLDNIKCNVDL 215
           GWISKRR MEIYCNRHMLKINGSTPLDNIKCNVDL
Sbjct: 181 GWISKRRLMEIYCNRHMLKINGSTPLDNIKCNVDL 215

[Close]

BLAST of Cp4.1LG07g06710 vs. NCBI nr
Match: KAG6586015.1 (hypothetical protein SDJN03_18748, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 390 bits (1003), Expect = 2.63e-136
Identity = 201/215 (93.49%), Postives = 205/215 (95.35%), Query Frame = 0


Query: 1   MSSTTNQPDQSSSSSSTIVQPPKRGSSNGQHRTTNRTRLLRIIGRSMLGLMVLVGLALVT 60
           MSSTTNQPDQ+SSSSSTIV+PPKR SS GQHRTTNRTR+LRIIGRSMLGLMVLVGLALVT
Sbjct: 1   MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVT 60

Query: 61  CWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYMTMTINEM 120
           CWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYM MTINEM
Sbjct: 61  CWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYMMMTINEM 120

Query: 121 GRMFEMVVCNFSQVPGNLTVLSPTIPIDFVYPLPRLQEKVKFDGISPELQLSANIRYIIN 180
           GR FEMV+ NFSQVPGNL VLSPTIPIDFVYPLPRLQEKVKFDGISPEL  SANIRYIIN
Sbjct: 121 GRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHFSANIRYIIN 180

Query: 181 GWISKRRSMEIYCNRHMLKINGSTPLDNIKCNVDL 215
           GWISK R MEIYCNRHMLKINGSTPLDNIKCNVDL
Sbjct: 181 GWISKSRLMEIYCNRHMLKINGSTPLDNIKCNVDL 215

[Close]

BLAST of Cp4.1LG07g06710 vs. NCBI nr
Match: XP_022969530.1 (uncharacterized protein LOC111468519 [Cucurbita maxima])

HSP 1 Score: 390 bits (1001), Expect = 5.31e-136
Identity = 200/215 (93.02%), Postives = 205/215 (95.35%), Query Frame = 0


Query: 1   MSSTTNQPDQSSSSSSTIVQPPKRGSSNGQHRTTNRTRLLRIIGRSMLGLMVLVGLALVT 60
           MSST+ QPDQ+SSSSSTIVQPPKR SSNGQHRTTNRTR+LRIIGRSMLGLMVLVGLALVT
Sbjct: 1   MSSTSKQPDQASSSSSTIVQPPKRASSNGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVT 60

Query: 61  CWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYMTMTINEM 120
           CWLVVTPKKPVFSLERGVVTLH LTDRKLNASVSFHIRSFNPNKKAAIHIDYM MTINEM
Sbjct: 61  CWLVVTPKKPVFSLERGVVTLHRLTDRKLNASVSFHIRSFNPNKKAAIHIDYMMMTINEM 120

Query: 121 GRMFEMVVCNFSQVPGNLTVLSPTIPIDFVYPLPRLQEKVKFDGISPELQLSANIRYIIN 180
           GR FEMV+ NFSQVPGNLTVLSPTIPIDFVYPLPRLQEKVKFDGISPEL LSA IRYIIN
Sbjct: 121 GRKFEMVMRNFSQVPGNLTVLSPTIPIDFVYPLPRLQEKVKFDGISPELYLSAGIRYIIN 180

Query: 181 GWISKRRSMEIYCNRHMLKINGSTPLDNIKCNVDL 215
           GW+SK R MEIYCNRHMLKINGSTPLDNIKCNVDL
Sbjct: 181 GWVSKPRLMEIYCNRHMLKINGSTPLDNIKCNVDL 215

[Close]

BLAST of Cp4.1LG07g06710 vs. NCBI nr
Match: KAG7037378.1 (hypothetical protein SDJN02_01003, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 379 bits (974), Expect = 5.80e-132
Identity = 198/215 (92.09%), Postives = 202/215 (93.95%), Query Frame = 0


Query: 1   MSSTTNQPDQSSSSSSTIVQPPKRGSSNGQHRTTNRTRLLRIIGRSMLGLMVLVGLALVT 60
           MSSTTNQPDQ+SSSSSTIV+PPKR SS GQHRTTNRTR+LRIIGRSMLGLMVLVGLALVT
Sbjct: 1   MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVT 60

Query: 61  CWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYMTMTINEM 120
           CWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYM MTINEM
Sbjct: 61  CWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYMMMTINEM 120

Query: 121 GRMFEMVVCNFSQVPGNLTVLSPTIPIDFVYPLPRLQEKVKFDGISPELQLSANIRYIIN 180
           GR FEMV+ NFSQVPGNL VLSPTIPIDFVYPLPRLQEKVKFDGISPEL L     YIIN
Sbjct: 121 GRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIIN 180

Query: 181 GWISKRRSMEIYCNRHMLKINGSTPLDNIKCNVDL 215
           GWISKRR MEIYCNRHMLKINGSTPLDNIKCNVDL
Sbjct: 181 GWISKRRLMEIYCNRHMLKINGSTPLDNIKCNVDL 210

[Close]

BLAST of Cp4.1LG07g06710 vs. ExPASy TrEMBL
Match: A0A6J1FBI3 (uncharacterized protein LOC111443928 OS=Cucurbita moschata OX=3662 GN=LOC111443928 PE=4 SV=1)

HSP 1 Score: 393 bits (1010), Expect = 1.09e-137
Identity = 203/215 (94.42%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 1   MSSTTNQPDQSSSSSSTIVQPPKRGSSNGQHRTTNRTRLLRIIGRSMLGLMVLVGLALVT 60
           MSSTTNQPDQ+SSSSST VQPPKR SS GQHRTTNRTR+LRIIGRSMLGLMVLVGLALVT
Sbjct: 1   MSSTTNQPDQASSSSSTTVQPPKRESSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVT 60

Query: 61  CWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYMTMTINEM 120
           CWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYM MTINEM
Sbjct: 61  CWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYMMMTINEM 120

Query: 121 GRMFEMVVCNFSQVPGNLTVLSPTIPIDFVYPLPRLQEKVKFDGISPELQLSANIRYIIN 180
           GR FEMV+ NFSQVPGNL VLSPTIPIDFVYPLPRLQEKVKFDGISPEL LSANIRYIIN
Sbjct: 121 GRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLSANIRYIIN 180

Query: 181 GWISKRRSMEIYCNRHMLKINGSTPLDNIKCNVDL 215
           GWISKRR MEIYCNRHMLKINGSTPLDNIKCNVDL
Sbjct: 181 GWISKRRLMEIYCNRHMLKINGSTPLDNIKCNVDL 215

[Close]

BLAST of Cp4.1LG07g06710 vs. ExPASy TrEMBL
Match: A0A6J1I064 (uncharacterized protein LOC111468519 OS=Cucurbita maxima OX=3661 GN=LOC111468519 PE=4 SV=1)

HSP 1 Score: 390 bits (1001), Expect = 2.57e-136
Identity = 200/215 (93.02%), Postives = 205/215 (95.35%), Query Frame = 0


Query: 1   MSSTTNQPDQSSSSSSTIVQPPKRGSSNGQHRTTNRTRLLRIIGRSMLGLMVLVGLALVT 60
           MSST+ QPDQ+SSSSSTIVQPPKR SSNGQHRTTNRTR+LRIIGRSMLGLMVLVGLALVT
Sbjct: 1   MSSTSKQPDQASSSSSTIVQPPKRASSNGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVT 60

Query: 61  CWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYMTMTINEM 120
           CWLVVTPKKPVFSLERGVVTLH LTDRKLNASVSFHIRSFNPNKKAAIHIDYM MTINEM
Sbjct: 61  CWLVVTPKKPVFSLERGVVTLHRLTDRKLNASVSFHIRSFNPNKKAAIHIDYMMMTINEM 120

Query: 121 GRMFEMVVCNFSQVPGNLTVLSPTIPIDFVYPLPRLQEKVKFDGISPELQLSANIRYIIN 180
           GR FEMV+ NFSQVPGNLTVLSPTIPIDFVYPLPRLQEKVKFDGISPEL LSA IRYIIN
Sbjct: 121 GRKFEMVMRNFSQVPGNLTVLSPTIPIDFVYPLPRLQEKVKFDGISPELYLSAGIRYIIN 180

Query: 181 GWISKRRSMEIYCNRHMLKINGSTPLDNIKCNVDL 215
           GW+SK R MEIYCNRHMLKINGSTPLDNIKCNVDL
Sbjct: 181 GWVSKPRLMEIYCNRHMLKINGSTPLDNIKCNVDL 215

[Close]

BLAST of Cp4.1LG07g06710 vs. ExPASy TrEMBL
Match: A0A6J1HJ52 (uncharacterized protein At1g08160-like OS=Cucurbita moschata OX=3662 GN=LOC111464936 PE=4 SV=1)

HSP 1 Score: 239 bits (610), Expect = 7.88e-77
Identity = 117/210 (55.71%), Postives = 159/210 (75.71%), Query Frame = 0


Query: 6   NQPDQSSSSSSTIVQPPKRGSSNGQHRTTNRTRLLRIIGRSMLGLMVLVGLALVTCWLVV 65
           N  +++SSS+++I++ PK  S   QH T  RT+L+RIIGRS+L +M LVGLA+V CWLVV
Sbjct: 4   NTQEEASSSTTSIIEAPKPSSYGQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVV 63

Query: 66  TPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYMTMTINEMGRMFE 125
            PK P   LE G VT HSLTDRKLNAS+SF I+S+NPNK+A+IH+D M MT+++MG+ F 
Sbjct: 64  FPKTPNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFI 123

Query: 126 MVVCNFSQVPGNLTVLSPTIPIDFVYPLPRLQEKVKFDGISPELQLSANIRYIINGWISK 185
             +  F+Q PGN T L+PT+ ++F+YP  ++++ +  DG++PEL  SA++ YI+  W SK
Sbjct: 124 TTIPTFTQPPGNQTFLNPTVEVNFIYPFGQMKDLMLSDGLNPELHFSAHVSYIVEKWASK 183

Query: 186 RRSMEIYCNRHMLKINGSTPLDNIKCNVDL 215
           RRS+EIYC+R  LKINGSTP DN KC VDL
Sbjct: 184 RRSLEIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]

BLAST of Cp4.1LG07g06710 vs. ExPASy TrEMBL
Match: A0A6J1I0B9 (uncharacterized protein At1g08160-like OS=Cucurbita maxima OX=3661 GN=LOC111469334 PE=4 SV=1)

HSP 1 Score: 236 bits (601), Expect = 1.83e-75
Identity = 115/206 (55.83%), Postives = 157/206 (76.21%), Query Frame = 0


Query: 10  QSSSSSSTIVQPPKRGSSNGQHRTTNRTRLLRIIGRSMLGLMVLVGLALVTCWLVVTPKK 69
           ++SSSS++I++ PK      QH T  RT+L+RIIGRS+L +M LVGLA+V CWLVV PK 
Sbjct: 8   EASSSSTSIIEAPKPSYYAQQHGTAKRTKLMRIIGRSLLAVMFLVGLAIVICWLVVFPKT 67

Query: 70  PVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHIDYMTMTINEMGRMFEMVVC 129
           P   LE G VT HSLTDRKLNAS+SF I+S+NPNK+A+IH+D M MT+++MG+ F   + 
Sbjct: 68  PNLILENGHVTPHSLTDRKLNASISFTIKSYNPNKRASIHMDSMKMTLDDMGQTFITTIP 127

Query: 130 NFSQVPGNLTVLSPTIPIDFVYPLPRLQEKVKFDGISPELQLSANIRYIINGWISKRRSM 189
            F+Q+PGN T L+PT+ ++F+YP  ++++ +  +G++PEL  SA++ YI+  W SKRRS+
Sbjct: 128 TFTQLPGNQTFLTPTVEVNFIYPFGQMKDLMLSNGLNPELHFSAHVSYIVEKWASKRRSL 187

Query: 190 EIYCNRHMLKINGSTPLDNIKCNVDL 215
           EIYC+R  LKINGSTP DN KC VDL
Sbjct: 188 EIYCDRVRLKINGSTPFDNTKCKVDL 213

[Close]

BLAST of Cp4.1LG07g06710 vs. ExPASy TrEMBL
Match: A0A0A0LSV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1)

HSP 1 Score: 192 bits (487), Expect = 3.43e-58
Identity = 93/186 (50.00%), Postives = 131/186 (70.43%), Query Frame = 0


Query: 30  QHRTTNRTRLLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKL 89
           +H T  RTR+LRI GR++LGLM+LV +A++ CWL+V P+ P   +E G V  HSLTDRKL
Sbjct: 27  KHGTAKRTRVLRITGRTLLGLMILVAIAMIICWLIVFPRNPDIIVETGQVIPHSLTDRKL 86

Query: 90  NASVSFHIRSFNPNKKAAIHIDYMTMTINEMGRMFEMVVCNFSQVPGNLTVLSPTIPIDF 149
           NA+++F + S+NPNKKA+I +D M M +++MG  F   + +F+Q P N TVL+ TI  +F
Sbjct: 87  NATIAFTVTSYNPNKKASIRMDSMRMIVSDMGLSFWSDIPSFTQPPKNKTVLTSTIQGNF 146

Query: 150 VYPLPRLQEKVKFDGISPELQLSANIRYIINGWISKRRSMEIYCNRHMLKINGSTPLDNI 209
           +YP   ++E +K +GISPEL+ SA + YI+  W S+ R +E+YC+   LK N ST  DN 
Sbjct: 147 IYPFGHMKELMKLEGISPELRFSAKVSYIMERWTSRDRLVEVYCDSLRLKFNDSTVFDNK 206

Query: 210 KCNVDL 215
           KC VDL
Sbjct: 207 KCKVDL 212

[Close]

BLAST of Cp4.1LG07g06710 vs. TAIR 10
Match: AT1G08160.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-06
Identity = 46/173 (26.59%), Postives = 84/173 (48.55%), Query Frame = 0


Query: 42  IIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSL--TDRKLNASVSFHIRS 101
           I+   +LGL  LVGLA++  +L + PK+ ++++E   V   ++   D  +NA  S+ I+S
Sbjct: 41  IVALVLLGL--LVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKS 100

Query: 102 FNPNKKAAIHIDYMTM-TINEMGRMFEMVVCNFSQVPGNLT-----VLSPTIPIDFVYPL 161
           +NP K  ++    M + T +    +    +  F Q P N T     ++S  + +      
Sbjct: 101 YNPEKHVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHNVALSKFNAR 160

Query: 162 PRLQEKVKFDGISPELQLSANIRYIINGWI--SKRRSMEIYCNRHMLKINGST 205
               EK K   I  E+ ++A + Y    WI  S+RR+++  C   M+ +  S+
Sbjct: 161 DLRAEKSK-GTIEMEVYITARVSY--KTWIFRSRRRTLKAVCTPVMINVTSSS 208

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g06710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZ13	2.2e-05	26.59	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana OX=3702 GN=At1g08160 P...	[more]

BLAST of Cp4.1LG07g06710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537505.1	3.38e-148	100.00	uncharacterized protein LOC111798522 [Cucurbita pepo subsp. pepo]	[more]
XP_022937554.1	2.26e-137	94.42	uncharacterized protein LOC111443928 [Cucurbita moschata]	[more]
KAG6586015.1	2.63e-136	93.49	hypothetical protein SDJN03_18748, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022969530.1	5.31e-136	93.02	uncharacterized protein LOC111468519 [Cucurbita maxima]	[more]
KAG7037378.1	5.80e-132	92.09	hypothetical protein SDJN02_01003, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cp4.1LG07g06710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FBI3	1.09e-137	94.42	uncharacterized protein LOC111443928 OS=Cucurbita moschata OX=3662 GN=LOC1114439...	[more]
A0A6J1I064	2.57e-136	93.02	uncharacterized protein LOC111468519 OS=Cucurbita maxima OX=3661 GN=LOC111468519...	[more]
A0A6J1HJ52	7.88e-77	55.71	uncharacterized protein At1g08160-like OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1I0B9	1.83e-75	55.83	uncharacterized protein At1g08160-like OS=Cucurbita maxima OX=3661 GN=LOC1114693...	[more]
A0A0A0LSV0	3.43e-58	50.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G134270 PE=4 SV=1	[more]

BLAST of Cp4.1LG07g06710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08160.1	1.6e-06	26.59	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	PANTHER	PTHR31852:SF5	GB\|AAF18257.1	coord: 30..214
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 30..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g06710.1	Cp4.1LG07g06710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane