Cp4.1LG07g04900 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g04900
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	GATA type zinc finger transcription factor family protein
Location	Cp4.1LG07: 3427026 .. 3428430 (+)
RNA-Seq Expression	Cp4.1LG07g04900
Synteny	Cp4.1LG07g04900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATCTCCATTCTTTCTTTCTGTTCCTAAAACGTTAGTATCAGTTCATTTTAGTCGATCTCTTCACTTATGGCTAACTCTAAGAACTAGAGTTTAAAAGTAACTTAAAAAGCAAGCATGTATGGCCCCACGTACGAATAATTTCAATCGACTGATACGTTATACGAATTTTTCGTTAGAACATATGATAATACAGAAACCAAACAATAATTTGAACTCTAAGAAACAATTTCTAAAATAATAATCAGTACTAATCAGATTTATTGTTAAATTTATCATCAATGAATCCTAATCCAAAATAAAGCTATTGTCCACGTACCTGTCATCATGATTGTTTGCTTCCCCCACTGAAATTATATATCCTTTGCTTCATTTTTTCCTATTCTTCCAAACAAAGCTCATTTCTTTCACTGAAGCCTCCACAGAGAAGAAGAAACCTTCACTGCAAGACAATGGCATTTGCAGGCACAACCCAGAAGTGTATGGCTTGTGAAAAGACCGTCTATCTCGTCGACAAGTTGACCGCTGATAACCGTGTCTACCACAAAGCCTGCTTCAGATGTCACCATTGCAAAGGAACTCTCAAGGTAAGATGGGCACTGGTTTTTGTTCCTCTTTTTTGTCTGTGGCTAATGAAGAAGCTGGAAGTTTGAAACTCAAGTTGTTCATCGGTTTTCAGCTCAGCAACTACAATTCCTTTGAAGGGGTTCTTTACTGCAGGCCACACTTTGATCAGATCTTTAAGAGGACTGGTAGTCTTGACAAAAGCTTTGAAGGTACAAAATTCTTGTTTGAATGGAACTGATTCTTCAGGTTCTTCAGGTTTCGATGCTAATTCTCTGTCGGATCTGTTTCTTTTTCGTGTTTTTAGGGACACCCAAGATCGTAAAACCAGAGAAACCGATCGATGGCGAGGTAATTCCTTGTTTCCCTTGAGCTTGTTACCTGAAGAATTTATTATATCTTTCCCATTAATCTCGAAAACGCATCAACAGAAACGGGCAGCGAGCAAGGTTGCTAACATGTTCGATGGAACAAGAGATAAATGTCTTGGCTGTAATAACACCGTCTTTCCAATAGAAAAGGTAACGACAAGACCCGAGTTTTTCTTCTTCCTCCTTTCGTTTCGTTAACTCAATGAGCAAATCCGATCTCTGTCATATGGTTTCTGTTTCAAGGTTACTGTGAATGGAATTCCATACCATAAAACTTGCTTCAAATGCTGTCATGGAGGATGCACGATCAGCCCTTCAAACTACATCGCTCACGAGGGGCGACTTTACTGCAAGCACCACCATATCCAACTGATCAAGGAGAAAGGAAACTTGAGTCAGCTTGAAGGAGACCATGAAAAGATAACAAGGGAGAAAATCAATGGTGGAGAGGTGGCTTCTGAGGCCTGA

mRNA sequence

ATGCCATCTCCATTCTTTCTTTCTGTTCCTAAAACCTCATTTCTTTCACTGAAGCCTCCACAGAGAAGAAGAAACCTTCACTGCAAGACAATGGCATTTGCAGGCACAACCCAGAAGTGTATGGCTTGTGAAAAGACCGTCTATCTCGTCGACAAGTTGACCGCTGATAACCGTGTCTACCACAAAGCCTGCTTCAGATGTCACCATTGCAAAGGAACTCTCAAGCTCAGCAACTACAATTCCTTTGAAGGGGTTCTTTACTGCAGGCCACACTTTGATCAGATCTTTAAGAGGACTGGTAGTCTTGACAAAAGCTTTGAAGGGACACCCAAGATCGTAAAACCAGAGAAACCGATCGATGGCGAGAAACGGGCAGCGAGCAAGGTTGCTAACATGTTCGATGGAACAAGAGATAAATGTCTTGGCTGTAATAACACCGTCTTTCCAATAGAAAAGGTTACTGTGAATGGAATTCCATACCATAAAACTTGCTTCAAATGCTGTCATGGAGGATGCACGATCAGCCCTTCAAACTACATCGCTCACGAGGGGCGACTTTACTGCAAGCACCACCATATCCAACTGATCAAGGAGAAAGGAAACTTGAGTCAGCTTGAAGGAGACCATGAAAAGATAACAAGGGAGAAAATCAATGGTGGAGAGGTGGCTTCTGAGGCCTGA

Coding sequence (CDS)

ATGCCATCTCCATTCTTTCTTTCTGTTCCTAAAACCTCATTTCTTTCACTGAAGCCTCCACAGAGAAGAAGAAACCTTCACTGCAAGACAATGGCATTTGCAGGCACAACCCAGAAGTGTATGGCTTGTGAAAAGACCGTCTATCTCGTCGACAAGTTGACCGCTGATAACCGTGTCTACCACAAAGCCTGCTTCAGATGTCACCATTGCAAAGGAACTCTCAAGCTCAGCAACTACAATTCCTTTGAAGGGGTTCTTTACTGCAGGCCACACTTTGATCAGATCTTTAAGAGGACTGGTAGTCTTGACAAAAGCTTTGAAGGGACACCCAAGATCGTAAAACCAGAGAAACCGATCGATGGCGAGAAACGGGCAGCGAGCAAGGTTGCTAACATGTTCGATGGAACAAGAGATAAATGTCTTGGCTGTAATAACACCGTCTTTCCAATAGAAAAGGTTACTGTGAATGGAATTCCATACCATAAAACTTGCTTCAAATGCTGTCATGGAGGATGCACGATCAGCCCTTCAAACTACATCGCTCACGAGGGGCGACTTTACTGCAAGCACCACCATATCCAACTGATCAAGGAGAAAGGAAACTTGAGTCAGCTTGAAGGAGACCATGAAAAGATAACAAGGGAGAAAATCAATGGTGGAGAGGTGGCTTCTGAGGCCTGA

Protein sequence

MPSPFFLSVPKTSFLSLKPPQRRRNLHCKTMAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPIEKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITREKINGGEVASEA

Homology

[Close]

BLAST of Cp4.1LG07g04900 vs. ExPASy Swiss-Prot
Match: Q94JX5 (LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=1 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 9.1e-95
Identity = 154/187 (82.35%), Postives = 173/187 (92.51%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           MAFAGTTQKCMAC+KTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HFDQ FKRTGSL+KSFEGTPKI KP++P++GE+ A +KV+NMF GTR+KC+GC+ TV+PI
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 210
           EKV+VNG  YHK+CFKC HGGCTISPSNYIAHEG+LYCKHHHIQLIKEKGNLSQLEG  E
Sbjct: 121 EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGE 180

Query: 211 KITREKI 218
              ++K+
Sbjct: 181 NAAKDKV 187

[Close]

BLAST of Cp4.1LG07g04900 vs. ExPASy Swiss-Prot
Match: P29675 (Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.3e-77
Identity = 126/175 (72.00%), Postives = 148/175 (84.57%), Query Frame = 0


Query: 32  AFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 91
           +F GTTQKC  CEKTVYLVDKL A+ RVYHKACFRCHHC  TLKLSN+NSF+GV+YCR H
Sbjct: 3   SFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHH 62

Query: 92  FDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPIE 151
           FDQ+FKRTGSL+KSF+GTPK  KPE+    E ++A+++++ F+GTRDKC  C   V+PIE
Sbjct: 63  FDQLFKRTGSLEKSFDGTPKF-KPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYPIE 122

Query: 152 KVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLE 207
           +V V+G  YH+ CFKCCHGGCTISPSNYIAHEGRLYCKHHHIQL K+KGN SQLE
Sbjct: 123 RVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYSQLE 176

[Close]

BLAST of Cp4.1LG07g04900 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.5e-60
Identity = 106/175 (60.57%), Postives = 127/175 (72.57%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           M+F GT QKC ACEKTVY V+ L+AD   YHKACF+C HCK  L+LSNY+S EGV+YCRP
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HF+Q+FK +GS  K+F+   K +  +KP     R  S++A MF GT+DKC  C  TV+PI
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPL-TDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPI 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 206
           EKVTV    YHK+CFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 EKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 174

[Close]

BLAST of Cp4.1LG07g04900 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 6.8e-58
Identity = 102/175 (58.29%), Postives = 126/175 (72.00%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           M+F GT QKC ACEKTVY V+ L+AD   YHK+CF+C HCK  L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HF+Q+FK +GS +K+F+   K    +K      R  S+VA  F GT++KC  C+ TV+PI
Sbjct: 61  HFEQLFKESGSFNKNFQSPAK--SADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPI 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 206
           EKVTV    YHK+CFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 173

[Close]

BLAST of Cp4.1LG07g04900 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 6.0e-54
Identity = 95/190 (50.00%), Postives = 127/190 (66.84%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           M+F GT  KC AC+KTVY++D LT +   YHK+CFRC HCKGTL +SNY+S +GVLYC+P
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HF+Q+FK +G+  K+F+      K EKP D   R  SK+++ F GT+DKC  C  TV+P+
Sbjct: 61  HFEQLFKESGNYSKNFQAG----KTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPL 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 210
           EKVT+ G  YHKTCF+C H GC ++ S+Y +  G LYCK H  QL  EKG+ + +     
Sbjct: 121 EKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAA 180

Query: 211 KITREKINGG 221
              R   +GG
Sbjct: 181 NHRRSASSGG 186

[Close]

BLAST of Cp4.1LG07g04900 vs. NCBI nr
Match: KAG7020611.1 (LIM domain-containing protein WLIM1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 457 bits (1175), Expect = 9.77e-162
Identity = 215/222 (96.85%), Postives = 217/222 (97.75%), Query Frame = 0


Query: 5   FFLSVPKTSFLSLKPPQRRRNLHCKTMAFAGTTQKCMACEKTVYLVDKLTADNRVYHKAC 64
           F  S  ++SFLSLKPPQRRRNLHCKTMAFAGTTQKCMACEKTVYLVDKLTADNRVYHKAC
Sbjct: 32  FSYSSKQSSFLSLKPPQRRRNLHCKTMAFAGTTQKCMACEKTVYLVDKLTADNRVYHKAC 91

Query: 65  FRCHHCKGTLKLSNYNSFEGVLYCRPHFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKR 124
           FRCHHCKGTLKLSNYNSFEGVLYCRPHFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKR
Sbjct: 92  FRCHHCKGTLKLSNYNSFEGVLYCRPHFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKR 151

Query: 125 AASKVANMFDGTRDKCLGCNNTVFPIEKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEG 184
           AASKVANMF GTRDKCLGCNNTVFPIEKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEG
Sbjct: 152 AASKVANMFGGTRDKCLGCNNTVFPIEKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEG 211

Query: 185 RLYCKHHHIQLIKEKGNLSQLEGDHEKITREKINGGEVASEA 226
           RLYCKHHHIQLIKEKGNLSQLEGDHEKITREKINGGEVASEA
Sbjct: 212 RLYCKHHHIQLIKEKGNLSQLEGDHEKITREKINGGEVASEA 253

[Close]

BLAST of Cp4.1LG07g04900 vs. NCBI nr
Match: XP_023538291.1 (LIM domain-containing protein WLIM1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 419 bits (1078), Expect = 7.65e-148
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 210
           EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 211 KITREKINGGEVASEA 226
           KITREKINGGEVASEA
Sbjct: 181 KITREKINGGEVASEA 196

[Close]

BLAST of Cp4.1LG07g04900 vs. NCBI nr
Match: XP_022951261.1 (LIM domain-containing protein WLIM1-like [Cucurbita moschata] >KAG6585708.1 LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 417 bits (1071), Expect = 8.93e-147
Identity = 195/196 (99.49%), Postives = 195/196 (99.49%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMF GTRDKCLGCNNTVFPI
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFGGTRDKCLGCNNTVFPI 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 210
           EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 211 KITREKINGGEVASEA 226
           KITREKINGGEVASEA
Sbjct: 181 KITREKINGGEVASEA 196

[Close]

BLAST of Cp4.1LG07g04900 vs. NCBI nr
Match: XP_023002619.1 (LIM domain-containing protein WLIM1 [Cucurbita maxima])

HSP 1 Score: 415 bits (1066), Expect = 5.17e-146
Identity = 194/196 (98.98%), Postives = 195/196 (99.49%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMF GTRDKCLGC+NTVFPI
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFGGTRDKCLGCHNTVFPI 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 210
           EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 211 KITREKINGGEVASEA 226
           KITREKINGGEVASEA
Sbjct: 181 KITREKINGGEVASEA 196

[Close]

BLAST of Cp4.1LG07g04900 vs. NCBI nr
Match: XP_022131363.1 (LIM domain-containing protein WLIM1-like [Momordica charantia])

HSP 1 Score: 397 bits (1020), Expect = 5.52e-139
Identity = 185/197 (93.91%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           MAFAGTTQKCMACEKTVYLVDKLTADNR+YHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HFDQ+FKRTGSLDKSFEGTPKIVKPEKPIDGEK  A+KVA+MF GTRDKCLGCNNTV+P 
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPIDGEKPTANKVASMFGGTRDKCLGCNNTVYPT 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 210
           EKVTVNG PYHK+CFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 211 KIT-REKINGGEVASEA 226
           KIT REKINGGEVASEA
Sbjct: 181 KITAREKINGGEVASEA 197

[Close]

BLAST of Cp4.1LG07g04900 vs. ExPASy TrEMBL
Match: A0A6J1GH23 (LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111454152 PE=4 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 4.32e-147
Identity = 195/196 (99.49%), Postives = 195/196 (99.49%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMF GTRDKCLGCNNTVFPI
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFGGTRDKCLGCNNTVFPI 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 210
           EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 211 KITREKINGGEVASEA 226
           KITREKINGGEVASEA
Sbjct: 181 KITREKINGGEVASEA 196

[Close]

BLAST of Cp4.1LG07g04900 vs. ExPASy TrEMBL
Match: A0A6J1KQZ1 (LIM domain-containing protein WLIM1 OS=Cucurbita maxima OX=3661 GN=LOC111496423 PE=4 SV=1)

HSP 1 Score: 415 bits (1066), Expect = 2.50e-146
Identity = 194/196 (98.98%), Postives = 195/196 (99.49%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMF GTRDKCLGC+NTVFPI
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFGGTRDKCLGCHNTVFPI 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 210
           EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 211 KITREKINGGEVASEA 226
           KITREKINGGEVASEA
Sbjct: 181 KITREKINGGEVASEA 196

[Close]

BLAST of Cp4.1LG07g04900 vs. ExPASy TrEMBL
Match: A0A6J1BT53 (LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC111004606 PE=4 SV=1)

HSP 1 Score: 397 bits (1020), Expect = 2.67e-139
Identity = 185/197 (93.91%), Postives = 191/197 (96.95%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           MAFAGTTQKCMACEKTVYLVDKLTADNR+YHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HFDQ+FKRTGSLDKSFEGTPKIVKPEKPIDGEK  A+KVA+MF GTRDKCLGCNNTV+P 
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPIDGEKPTANKVASMFGGTRDKCLGCNNTVYPT 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 210
           EKVTVNG PYHK+CFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 211 KIT-REKINGGEVASEA 226
           KIT REKINGGEVASEA
Sbjct: 181 KITAREKINGGEVASEA 197

[Close]

BLAST of Cp4.1LG07g04900 vs. ExPASy TrEMBL
Match: A0A1S3BBD7 (LIM domain-containing protein WLIM1 OS=Cucumis melo OX=3656 GN=LOC103487830 PE=4 SV=1)

HSP 1 Score: 390 bits (1001), Expect = 2.18e-136
Identity = 184/198 (92.93%), Postives = 191/198 (96.46%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           MAFAGTTQKCMACEKTVYLVDKLTADNR+YHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPID EK  A+KVA+MF GTRDKCLGC+NTV+P 
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEKPTANKVASMFGGTRDKCLGCDNTVYPT 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 210
           EKVTVNGIPYHK+CFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 211 KIT-REKINGGEV-ASEA 226
           KIT +EKINGGEV ASEA
Sbjct: 181 KITAKEKINGGEVVASEA 198

[Close]

BLAST of Cp4.1LG07g04900 vs. ExPASy TrEMBL
Match: A0A6J1K7W9 (LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC111492481 PE=4 SV=1)

HSP 1 Score: 386 bits (991), Expect = 7.04e-135
Identity = 179/197 (90.86%), Postives = 187/197 (94.92%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           MAFAGTTQKCMACEKTVYLVDKLTADNR+YHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HFDQ+FKRTGSLDKSFEGTPKIVKPEKP+D EK  A KVA+MF GTRDKCLGCNNTV+P 
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPVDSEKPTAKKVASMFGGTRDKCLGCNNTVYPT 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 210
           EKVTVNG PYHK+CFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE
Sbjct: 121 EKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 180

Query: 211 KI-TREKINGGEVASEA 226
           KI ++EKING  VASEA
Sbjct: 181 KIPSKEKINGEAVASEA 197

[Close]

BLAST of Cp4.1LG07g04900 vs. TAIR 10
Match: AT1G10200.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 347.8 bits (891), Expect = 6.5e-96
Identity = 154/187 (82.35%), Postives = 173/187 (92.51%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           MAFAGTTQKCMAC+KTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HFDQ FKRTGSL+KSFEGTPKI KP++P++GE+ A +KV+NMF GTR+KC+GC+ TV+PI
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHE 210
           EKV+VNG  YHK+CFKC HGGCTISPSNYIAHEG+LYCKHHHIQLIKEKGNLSQLEG  E
Sbjct: 121 EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGE 180

Query: 211 KITREKI 218
              ++K+
Sbjct: 181 NAAKDKV 187

[Close]

BLAST of Cp4.1LG07g04900 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 233.4 bits (594), Expect = 1.8e-61
Identity = 106/175 (60.57%), Postives = 127/175 (72.57%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           M+F GT QKC ACEKTVY V+ L+AD   YHKACF+C HCK  L+LSNY+S EGV+YCRP
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HF+Q+FK +GS  K+F+   K +  +KP     R  S++A MF GT+DKC  C  TV+PI
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPL-TDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPI 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 206
           EKVTV    YHK+CFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 EKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 174

[Close]

BLAST of Cp4.1LG07g04900 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 225.3 bits (573), Expect = 4.8e-59
Identity = 102/175 (58.29%), Postives = 126/175 (72.00%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           M+F GT QKC ACEKTVY V+ L+AD   YHK+CF+C HCK  L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HF+Q+FK +GS +K+F+   K    +K      R  S+VA  F GT++KC  C+ TV+PI
Sbjct: 61  HFEQLFKESGSFNKNFQSPAK--SADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPI 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 206
           EKVTV    YHK+CFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 173

[Close]

BLAST of Cp4.1LG07g04900 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 225.3 bits (573), Expect = 4.8e-59
Identity = 102/175 (58.29%), Postives = 126/175 (72.00%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           M+F GT QKC ACEKTVY V+ L+AD   YHK+CF+C HCK  L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HF+Q+FK +GS +K+F+   K    +K      R  S+VA  F GT++KC  C+ TV+PI
Sbjct: 61  HFEQLFKESGSFNKNFQSPAK--SADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPI 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 206
           EKVTV    YHK+CFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 173

[Close]

BLAST of Cp4.1LG07g04900 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 225.3 bits (573), Expect = 4.8e-59
Identity = 102/175 (58.29%), Postives = 126/175 (72.00%), Query Frame = 0


Query: 31  MAFAGTTQKCMACEKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 90
           M+F GT QKC ACEKTVY V+ L+AD   YHK+CF+C HCK  L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 91  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDGEKRAASKVANMFDGTRDKCLGCNNTVFPI 150
           HF+Q+FK +GS +K+F+   K    +K      R  S+VA  F GT++KC  C+ TV+PI
Sbjct: 61  HFEQLFKESGSFNKNFQSPAK--SADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPI 120

Query: 151 EKVTVNGIPYHKTCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQL 206
           EKVTV    YHK+CFKC HGGC ISPSNY A EG LYCKHH  QL KEKG+ + L
Sbjct: 121 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHL 173

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g04900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JX5	9.1e-95	82.35	LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=...	[more]
P29675	2.3e-77	72.00	Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1	[more]
O04193	2.5e-60	60.57	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q9M047	6.8e-58	58.29	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O80839	6.0e-54	50.00	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]

BLAST of Cp4.1LG07g04900 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020611.1	9.77e-162	96.85	LIM domain-containing protein WLIM1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023538291.1	7.65e-148	100.00	LIM domain-containing protein WLIM1 [Cucurbita pepo subsp. pepo]	[more]
XP_022951261.1	8.93e-147	99.49	LIM domain-containing protein WLIM1-like [Cucurbita moschata] >KAG6585708.1 LIM ...	[more]
XP_023002619.1	5.17e-146	98.98	LIM domain-containing protein WLIM1 [Cucurbita maxima]	[more]
XP_022131363.1	5.52e-139	93.91	LIM domain-containing protein WLIM1-like [Momordica charantia]	[more]

BLAST of Cp4.1LG07g04900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GH23	4.32e-147	99.49	LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KQZ1	2.50e-146	98.98	LIM domain-containing protein WLIM1 OS=Cucurbita maxima OX=3661 GN=LOC111496423 ...	[more]
A0A6J1BT53	2.67e-139	93.91	LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A1S3BBD7	2.18e-136	92.93	LIM domain-containing protein WLIM1 OS=Cucumis melo OX=3656 GN=LOC103487830 PE=4...	[more]
A0A6J1K7W9	7.04e-135	90.86	LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of Cp4.1LG07g04900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10200.1	6.5e-96	82.35	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	1.8e-61	60.57	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	4.8e-59	58.29	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	4.8e-59	58.29	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	4.8e-59	58.29	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 139..191 e-value: 1.3E-10 score: 51.3 coord: 39..91 e-value: 1.2E-10 score: 51.4
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 140..194 e-value: 2.7E-10 score: 40.3 coord: 40..93 e-value: 5.3E-10 score: 39.4
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 40..74
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 138..198 score: 11.8306
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 38..98 score: 13.0879
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 34..104 e-value: 7.2E-19 score: 69.7 coord: 135..204 e-value: 2.1E-16 score: 61.8
None	No IPR available	PANTHER	PTHR24206:SF92	GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 31..215
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 31..215
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 36..98 e-value: 8.47156E-41 score: 131.818
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 140..200 e-value: 2.74903E-37 score: 122.964
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 166..205
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 132..165
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 66..106
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 33..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g04900.1	Cp4.1LG07g04900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding