Cp4.1LG07g04590 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG07g04590
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionHistone-lysine N-methyltransferase
LocationCp4.1LG07: 2882381 .. 2882665 (-)
RNA-Seq ExpressionCp4.1LG07g04590
SyntenyCp4.1LG07g04590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCTATATCACCTCAGTCTTATCCTGTCGGAGATCAAGAGAAGGAGAAGACGGTGGCAGACGCGGCGGCAGGCCCAGATGTGACGAGGCATATTCGGTTGAAGTCTTCCCATTCCACCCAAGTACTGGAGAAGGCGGTGGTGCTGCGGCGGATCCGACAGCGGAAGCGTGTTAACAAGTTCCGGGCAGTGGTCGGAGCTCTGTTCAGTTCGCCTTTCGGCGACAAAACCGGCGAGGCTCGTCAGAGAAAATGGGTGGATGAACCCTTCACTTCACTCTAG

mRNA sequence

ATGGCGGCTATATCACCTCAGTCTTATCCTGTCGGAGATCAAGAGAAGGAGAAGACGGTGGCAGACGCGGCGGCAGGCCCAGATGTGACGAGGCATATTCGGTTGAAGTCTTCCCATTCCACCCAAGTACTGGAGAAGGCGGTGGTGCTGCGGCGGATCCGACAGCGGAAGCGTGTTAACAAGTTCCGGGCAGTGGTCGGAGCTCTGTTCAGTTCGCCTTTCGGCGACAAAACCGGCGAGGCTCGTCAGAGAAAATGGGTGGATGAACCCTTCACTTCACTCTAG

Coding sequence (CDS)

ATGGCGGCTATATCACCTCAGTCTTATCCTGTCGGAGATCAAGAGAAGGAGAAGACGGTGGCAGACGCGGCGGCAGGCCCAGATGTGACGAGGCATATTCGGTTGAAGTCTTCCCATTCCACCCAAGTACTGGAGAAGGCGGTGGTGCTGCGGCGGATCCGACAGCGGAAGCGTGTTAACAAGTTCCGGGCAGTGGTCGGAGCTCTGTTCAGTTCGCCTTTCGGCGACAAAACCGGCGAGGCTCGTCAGAGAAAATGGGTGGATGAACCCTTCACTTCACTCTAG

Protein sequence

MAAISPQSYPVGDQEKEKTVADAAAGPDVTRHIRLKSSHSTQVLEKAVVLRRIRQRKRVNKFRAVVGALFSSPFGDKTGEARQRKWVDEPFTSL
Homology
BLAST of Cp4.1LG07g04590 vs. NCBI nr
Match: KAG6585633.1 (hypothetical protein SDJN03_18366, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020540.1 hypothetical protein SDJN02_17225, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 176 bits (447), Expect = 1.89e-55
Identity = 89/94 (94.68%), Postives = 92/94 (97.87%), Query Frame = 0

Query: 1  MAAISPQSYPVGDQEKEKTVADAAAGPDVTRHIRLKSSHSTQVLEKAVVLRRIRQRKRVN 60
          MAA+SP SYPVGDQEK+KTVADAAA PDVTRHIRLKSSHSTQVLEKAVVLRRIRQRKRVN
Sbjct: 1  MAAVSPHSYPVGDQEKDKTVADAAASPDVTRHIRLKSSHSTQVLEKAVVLRRIRQRKRVN 60

Query: 61 KFRAVVGALFSSPFGDKTGEARQRKWVDEPFTSL 94
          KF+AVVGALFSSPFGDKTGEARQRKWVDEPFTSL
Sbjct: 61 KFQAVVGALFSSPFGDKTGEARQRKWVDEPFTSL 94

BLAST of Cp4.1LG07g04590 vs. NCBI nr
Match: KAG6598407.1 (hypothetical protein SDJN03_08185, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 120 bits (301), Expect = 4.51e-33
Identity = 72/103 (69.90%), Postives = 76/103 (73.79%), Query Frame = 0

Query: 1   MAAISPQSYPV-----GDQEK---EKTVADAAAGPDVTRHIRLKSSHSTQV-LEKAVVLR 60
           MAA+SP    V     G QE+   E     AA GPDVTRHI +KSS STQV LEKAVVLR
Sbjct: 1   MAAMSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRSTQVSLEKAVVLR 60

Query: 61  RIRQRKRVNKFRAVVGALFSSPFGDKTGEARQRKWVDEPFTSL 94
           RIR RKRVNKF+AVVGALFSSPF DK  E RQRKWVDEPFTSL
Sbjct: 61  RIRHRKRVNKFQAVVGALFSSPFADKADETRQRKWVDEPFTSL 103

BLAST of Cp4.1LG07g04590 vs. NCBI nr
Match: KAA0065270.1 (hypothetical protein E6C27_scaffold82G006120 [Cucumis melo var. makuwa])

HSP 1 Score: 119 bits (299), Expect = 9.08e-33
Identity = 71/103 (68.93%), Postives = 76/103 (73.79%), Query Frame = 0

Query: 1   MAAISPQSYPV-----GDQEKEK--TVADAAAGPDVTRHIRLKSS--HSTQVLEKAVVLR 60
           MAA+SP+ Y V     GDQ + +  T   AA GP VTRHI +KSS  HS Q LEKAVVLR
Sbjct: 1   MAAMSPRPYSVEKKIDGDQVEAEIETEVSAALGPAVTRHIVVKSSPSHSNQALEKAVVLR 60

Query: 61  RIRQRKRVNKFRAVVGALFSSPFGDKTGEARQRKWVDEPFTSL 94
           RIRQRKRVNK RA VGALFSSPF DKT E  QRKWVDEPFTSL
Sbjct: 61  RIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 103

BLAST of Cp4.1LG07g04590 vs. NCBI nr
Match: KGN62559.1 (hypothetical protein Csa_022598 [Cucumis sativus])

HSP 1 Score: 106 bits (264), Expect = 2.29e-27
Identity = 71/113 (62.83%), Postives = 75/113 (66.37%), Query Frame = 0

Query: 1   MAAISPQSYPV-----GDQ-----EKEKTVADAAA---GPDVTRHIRLKSSHST------ 60
           MAA+SPQ Y V     GDQ     E E   A A A   GP VTRHI +KSS S+      
Sbjct: 1   MAAMSPQPYSVEKKIAGDQVEAEIETESAAAGAGADALGPAVTRHIVVKSSSSSSSYQSN 60

Query: 61  QVLEKAVVLRRIRQRKRVNKFRAVVGALFSSPFGDKTGEARQRKWVDEPFTSL 94
           Q LEKAVVLRRIRQRKRVNK RA VGALFSSPF DKT    +RKWVDEPFTSL
Sbjct: 61  QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKT----ERKWVDEPFTSL 109

BLAST of Cp4.1LG07g04590 vs. NCBI nr
Match: KAG7029360.1 (Wall-associated receptor kinase-like 14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 92.0 bits (227), Expect = 3.20e-19
Identity = 59/89 (66.29%), Postives = 63/89 (70.79%), Query Frame = 0

Query: 1  MAAISPQSYPV-----GDQEK---EKTVADAAAGPDVTRHIRLKSSHSTQV-LEKAVVLR 60
          MAA+SP    V     G QE+   E     AA GPDVTRHI +KSS STQV LEKAVVLR
Sbjct: 1  MAAMSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRSTQVSLEKAVVLR 60

Query: 61 RIRQRKRVNKFRAVVGALFSSPFGDKTGE 80
          RIR RKRVNKF+AVVGALFSSPF DK  E
Sbjct: 61 RIRHRKRVNKFQAVVGALFSSPFADKADE 89

BLAST of Cp4.1LG07g04590 vs. ExPASy TrEMBL
Match: A0A5A7VDJ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006120 PE=4 SV=1)

HSP 1 Score: 119 bits (299), Expect = 4.40e-33
Identity = 71/103 (68.93%), Postives = 76/103 (73.79%), Query Frame = 0

Query: 1   MAAISPQSYPV-----GDQEKEK--TVADAAAGPDVTRHIRLKSS--HSTQVLEKAVVLR 60
           MAA+SP+ Y V     GDQ + +  T   AA GP VTRHI +KSS  HS Q LEKAVVLR
Sbjct: 1   MAAMSPRPYSVEKKIDGDQVEAEIETEVSAALGPAVTRHIVVKSSPSHSNQALEKAVVLR 60

Query: 61  RIRQRKRVNKFRAVVGALFSSPFGDKTGEARQRKWVDEPFTSL 94
           RIRQRKRVNK RA VGALFSSPF DKT E  QRKWVDEPFTSL
Sbjct: 61  RIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 103

BLAST of Cp4.1LG07g04590 vs. ExPASy TrEMBL
Match: A0A0A0LNJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360760 PE=4 SV=1)

HSP 1 Score: 106 bits (264), Expect = 1.11e-27
Identity = 71/113 (62.83%), Postives = 75/113 (66.37%), Query Frame = 0

Query: 1   MAAISPQSYPV-----GDQ-----EKEKTVADAAA---GPDVTRHIRLKSSHST------ 60
           MAA+SPQ Y V     GDQ     E E   A A A   GP VTRHI +KSS S+      
Sbjct: 1   MAAMSPQPYSVEKKIAGDQVEAEIETESAAAGAGADALGPAVTRHIVVKSSSSSSSYQSN 60

Query: 61  QVLEKAVVLRRIRQRKRVNKFRAVVGALFSSPFGDKTGEARQRKWVDEPFTSL 94
           Q LEKAVVLRRIRQRKRVNK RA VGALFSSPF DKT    +RKWVDEPFTSL
Sbjct: 61  QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKT----ERKWVDEPFTSL 109

BLAST of Cp4.1LG07g04590 vs. ExPASy TrEMBL
Match: A0A2N9G0R5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20842 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.66e-13
Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 0

Query: 29  VTRHIRLKSSHSTQVLEKAVVLRRIRQRKRVNKFRAVVGALFSSPFGDKTGEA--RQRKW 88
           VT H+ +K +HSTQ L+K VVLRRIRQRKRVNK +A   AL SSPF  K  +    ++KW
Sbjct: 38  VTSHLYIKPTHSTQPLDKEVVLRRIRQRKRVNKVKATFQALVSSPFSAKPDKVSVHKKKW 97

Query: 89  VDEPFTSL 94
            D+ F +L
Sbjct: 98  ADDAFAAL 105

BLAST of Cp4.1LG07g04590 vs. ExPASy TrEMBL
Match: A0A498HNN1 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_012832 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.18e-13
Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = 0

Query: 11  VGDQEKEKTVADAAAGPDVTRHIRLKSSHSTQVLEKAVVLRRIRQRKRVNKFRAVVGALF 70
           +G +E++K  A+      V+ H+ +K +H++Q L+K VVLRRIRQRKRVN+ RA + AL 
Sbjct: 25  IGLKEEQKEPAETYEHNYVSSHVHIKPTHTSQPLDKEVVLRRIRQRKRVNRVRAALQALL 84

Query: 71  SSPFGDKTGEARQRKWVDEPFTS 93
           SSP    +   ++ KWVD+ F S
Sbjct: 85  SSP---SSPSVQENKWVDDAFAS 104

BLAST of Cp4.1LG07g04590 vs. ExPASy TrEMBL
Match: A0A7J7D397 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW11G00807 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.63e-13
Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = 0

Query: 10  PVGDQEKEKTVADAAAGPDVTRHIRLKSSHSTQVLEKAVVLRRIRQRKRVNKFRAVVGAL 69
           P+ DQE      D      VT H+ LK +H+TQ L++ VVLRRIR RKRVNK +A + +L
Sbjct: 21  PIEDQE------DPEISNSVTTHLYLKPAHTTQTLDREVVLRRIRNRKRVNKIKAALLSL 80

Query: 70  FSSPFGDKTGEAR--QRKWVDEPFTSL 94
           F SP   +T +    +++WVD+ F +L
Sbjct: 81  FGSPISSETEKTSVDKKRWVDDAFAAL 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6585633.11.89e-5594.68hypothetical protein SDJN03_18366, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6598407.14.51e-3369.90hypothetical protein SDJN03_08185, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0065270.19.08e-3368.93hypothetical protein E6C27_scaffold82G006120 [Cucumis melo var. makuwa][more]
KGN62559.12.29e-2762.83hypothetical protein Csa_022598 [Cucumis sativus][more]
KAG7029360.13.20e-1966.29Wall-associated receptor kinase-like 14, partial [Cucurbita argyrosperma subsp. ... [more]
Match NameE-valueIdentityDescription
A0A5A7VDJ54.40e-3368.93Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LNJ01.11e-2762.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360760 PE=4 SV=1[more]
A0A2N9G0R53.66e-1354.41Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20842 PE=4 SV=1[more]
A0A498HNN15.18e-1344.58Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_012832 PE=4 SV=1[more]
A0A7J7D3976.63e-1343.68Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW11G00807 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR35324BNAA08G03750D PROTEINcoord: 15..94
NoneNo IPR availablePANTHERPTHR35324:SF4BNAA08G03750D PROTEINcoord: 15..94

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g04590.1Cp4.1LG07g04590.1mRNA