Cp4.1LG07g01930 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g01930
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	gibberellin 3-beta-dioxygenase 1-like
Location	Cp4.1LG07: 1733401 .. 1734131 (+)
RNA-Seq Expression	Cp4.1LG07g01930
Synteny	Cp4.1LG07g01930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACGTACACAATTAGAGTTTACCACTCTATGCATATAAATTAGGGCTTACCACTTACCCGTTCAAATATTTTCGTAGTTTAAACTAAATTTGAGATTAAAATATATTTCTATACACCATCATTAAAATATTCGTACTAGAAGTGAAACTCTCGGTATTGTTTATCACAAAAATCTAATTAATTACATAAACTCATATTATCTTTTATTGAATATACGTCGAACTATTTTTATCCTGCTCATTACTTTTTTTTTTTTTTTTTTTTTTTACTCGGGTAAGTCCTACACCGCCCTCCAACTGAACTCGTATCCACCGTGCCCTGATCCAGACCAAGTCATGGGCCTTGCTGCCCACACCGACACCTCCCTCTTCACCATCGTTCACCAGGCATGCAATGACGGCCTCCAAATCTTCAAAGACAAAGCAGGCTGGATTCCGTTGTCTCCGATGAGAGGTTCTTTCGTTGTCAACGTTGGCGACCTTCTCCACATTATGTCGAACGGGCGGTTTCGGAGCATTCTTCATCGGGTTACGATACAAGGGAAGAAGGTGCATAGATTTTCATTGGCATATTTCTATTATCCACCACCTTATTTATATATTACACCTCATTGCAAGGCATTGAGTGAATCACCACAAACTCCTCTCTATCGGTGTGTGAGTGTGAAAGAATATTTCACCATGAAGGCCAAAAACAATGGGGAGGGACTTTCTACCATCAAAATATGA

mRNA sequence

ATGCACTCCTACACCGCCCTCCAACTGAACTCGTATCCACCGTGCCCTGATCCAGACCAAGTCATGGGCCTTGCTGCCCACACCGACACCTCCCTCTTCACCATCGTTCACCAGGCATGCAATGACGGCCTCCAAATCTTCAAAGACAAAGCAGGCTGGATTCCGTTGTCTCCGATGAGAGGTTCTTTCGTTGTCAACGTTGGCGACCTTCTCCACATTATGTCGAACGGGCGGTTTCGGAGCATTCTTCATCGGGTTACGATACAAGGGAAGAAGGTGCATAGATTTTCATTGGCATATTTCTATTATCCACCACCTTATTTATATATTACACCTCATTGCAAGGCATTGAGTGAATCACCACAAACTCCTCTCTATCGGTGTGTGAGTGTGAAAGAATATTTCACCATGAAGGCCAAAAACAATGGGGAGGGACTTTCTACCATCAAAATATGA

Coding sequence (CDS)

ATGCACTCCTACACCGCCCTCCAACTGAACTCGTATCCACCGTGCCCTGATCCAGACCAAGTCATGGGCCTTGCTGCCCACACCGACACCTCCCTCTTCACCATCGTTCACCAGGCATGCAATGACGGCCTCCAAATCTTCAAAGACAAAGCAGGCTGGATTCCGTTGTCTCCGATGAGAGGTTCTTTCGTTGTCAACGTTGGCGACCTTCTCCACATTATGTCGAACGGGCGGTTTCGGAGCATTCTTCATCGGGTTACGATACAAGGGAAGAAGGTGCATAGATTTTCATTGGCATATTTCTATTATCCACCACCTTATTTATATATTACACCTCATTGCAAGGCATTGAGTGAATCACCACAAACTCCTCTCTATCGGTGTGTGAGTGTGAAAGAATATTTCACCATGAAGGCCAAAAACAATGGGGAGGGACTTTCTACCATCAAAATATGA

Protein sequence

MHSYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGSFVVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQTPLYRCVSVKEYFTMKAKNNGEGLSTIKI

Homology

[Close]

BLAST of Cp4.1LG07g01930 vs. ExPASy Swiss-Prot
Match: O24648 (Gibberellin 3-beta-dioxygenase 1 OS=Pisum sativum OX=3888 GN=LE PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.1e-35
Identity = 72/146 (49.32%), Postives = 99/146 (67.81%), Query Frame = 0


Query: 6   ALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGSFVV 65
           ALQLNSYP CPDPD  MGLA HTD++  TI+ Q    GLQ+ ++ +GWI + P++G  VV
Sbjct: 210 ALQLNSYPSCPDPDHAMGLAPHTDSTFLTILSQNDISGLQVNREGSGWITVPPLQGGLVV 269

Query: 66  NVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQTPL 125
           NVGDL HI+SNG + S+LHRV +   +  RFS+AY Y PP  + I PH K +  + + PL
Sbjct: 270 NVGDLFHILSNGLYPSVLHRVLVNRTR-QRFSVAYLYGPPSNVEICPHAKLIGPT-KPPL 329

Query: 126 YRCVSVKEYFTMKAKNNGEGLSTIKI 152
           YR V+  EY   KAK+  + LS++++
Sbjct: 330 YRSVTWNEYLGTKAKHFNKALSSVRL 353

[Close]

BLAST of Cp4.1LG07g01930 vs. ExPASy Swiss-Prot
Match: Q9ZT84 (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana OX=3702 GN=GA3OX2 PE=1 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 6.6e-33
Identity = 70/144 (48.61%), Postives = 98/144 (68.06%), Query Frame = 0


Query: 7   LQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGSFVVN 66
           +QLN YP CP+PD+ MGLAAHTD++L TI++Q    GLQ+F+D  GW+   P+ GS VVN
Sbjct: 205 IQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQNNTAGLQVFRDDVGWVTAPPVPGSLVVN 264

Query: 67  VGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQTPLY 126
           VGDLLHI++NG F S+LHR  +   +  RFS+AY + PP  + I+P  K L +  Q+PLY
Sbjct: 265 VGDLLHILTNGIFPSVLHRARVNHVR-SRFSMAYLWGPPSDIMISPLPK-LVDPLQSPLY 324

Query: 127 RCVSVKEYFTMKAKNNGEGLSTIK 151
             ++ K+Y   KA +  + LS I+
Sbjct: 325 PSLTWKQYLATKATHFNQSLSIIR 346

[Close]

BLAST of Cp4.1LG07g01930 vs. ExPASy Swiss-Prot
Match: Q39103 (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana OX=3702 GN=GA3OX1 PE=1 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 1.5e-32
Identity = 70/145 (48.28%), Postives = 98/145 (67.59%), Query Frame = 0


Query: 6   ALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGSFVV 65
           ALQLN YP CP+PD+ MGLAAHTD++L TI++Q    GLQ+F+D  GW+ + P  GS VV
Sbjct: 211 ALQLNHYPVCPEPDRAMGLAAHTDSTLLTILYQNNTAGLQVFRDDLGWVTVPPFPGSLVV 270

Query: 66  NVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQTPL 125
           NVGDL HI+SNG F+S+LHR  +   +  R S+A+ + P   + I+P  K +S   ++PL
Sbjct: 271 NVGDLFHILSNGLFKSVLHRARVNQTRA-RLSVAFLWGPQSDIKISPVPKLVS-PVESPL 330

Query: 126 YRCVSVKEYFTMKAKNNGEGLSTIK 151
           Y+ V+ KEY   KA +  + LS I+
Sbjct: 331 YQSVTWKEYLRTKATHFNKALSMIR 353

[Close]

BLAST of Cp4.1LG07g01930 vs. ExPASy Swiss-Prot
Match: Q9C971 (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana OX=3702 GN=GA3OX4 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.1e-27
Identity = 59/147 (40.14%), Postives = 96/147 (65.31%), Query Frame = 0


Query: 6   ALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGSFVV 65
           A++LN YP CP+P++ MGLAAHTD+++ TI+HQ+   GLQ+F++++GW+ + P  G  VV
Sbjct: 206 AIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSNTGGLQVFREESGWVTVEPAPGVLVV 265

Query: 66  NVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFY-YPPPYLYITPHCKALSESPQTP 125
           N+GDL HI+SNG+  S++HR  +   +  R S+AY +  P   + I P  K L+   +  
Sbjct: 266 NIGDLFHILSNGKIPSVVHRAKVNHTR-SRISIAYLWGGPAGDVQIAPISK-LTGPAEPS 325

Query: 126 LYRCVSVKEYFTMKAKNNGEGLSTIKI 152
           LYR ++ KEY  +K +   + +  I++
Sbjct: 326 LYRSITWKEYLQIKYEVFDKAMDAIRV 350

[Close]

BLAST of Cp4.1LG07g01930 vs. ExPASy Swiss-Prot
Match: Q9SVS8 (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana OX=3702 GN=GA3OX3 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.1e-26
Identity = 67/147 (45.58%), Postives = 89/147 (60.54%), Query Frame = 0


Query: 7   LQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQI---FKDKAGWIPLSPMRGSF 66
           LQLNSYP CPDP   MGLA HTD+SL TI++Q    GL+I    ++ + WI + P+ GS 
Sbjct: 206 LQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGNIPGLEIESPQEEGSRWIGVEPIEGSL 265

Query: 67  VVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQT 126
           VV +GDL HI+SNG+FRS +HR  +  K  HR S AYF  PP  L I P     S+    
Sbjct: 266 VVIMGDLSHIISNGQFRSTMHRAVV-NKTHHRVSAAYFAGPPKNLQIGP---LTSDKNHP 325

Query: 127 PLYRCVSVKEYFTMKAKNNGEGLSTIK 151
           P+YR +  +EY   KA +  + L+  +
Sbjct: 326 PIYRRLIWEEYLAAKATHFNKALTLFR 348

[Close]

BLAST of Cp4.1LG07g01930 vs. NCBI nr
Match: XP_023522671.1 (gibberellin 3-beta-dioxygenase 1-like, partial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312 bits (800), Expect = 3.54e-107
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 3   SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGS 62
           SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGS
Sbjct: 22  SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGS 81

Query: 63  FVVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQ 122
           FVVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQ
Sbjct: 82  FVVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQ 141

Query: 123 TPLYRCVSVKEYFTMKAKNNGEGLSTIKI 151
           TPLYRCVSVKEYFTMKAKNNGEGLSTIKI
Sbjct: 142 TPLYRCVSVKEYFTMKAKNNGEGLSTIKI 170

[Close]

BLAST of Cp4.1LG07g01930 vs. NCBI nr
Match: XP_023537854.1 (gibberellin 3-beta-dioxygenase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312 bits (800), Expect = 1.19e-104
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 3   SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGS 62
           SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGS
Sbjct: 193 SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGS 252

Query: 63  FVVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQ 122
           FVVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQ
Sbjct: 253 FVVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQ 312

Query: 123 TPLYRCVSVKEYFTMKAKNNGEGLSTIKI 151
           TPLYRCVSVKEYFTMKAKNNGEGLSTIKI
Sbjct: 313 TPLYRCVSVKEYFTMKAKNNGEGLSTIKI 341

[Close]

BLAST of Cp4.1LG07g01930 vs. NCBI nr
Match: XP_022951873.1 (gibberellin 3-beta-dioxygenase 1-like [Cucurbita moschata])

HSP 1 Score: 308 bits (789), Expect = 5.58e-103
Identity = 145/149 (97.32%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 3   SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGS 62
           SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGW+PLSPMRGS
Sbjct: 193 SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGS 252

Query: 63  FVVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQ 122
           FVVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYI+PHCK LSESPQ
Sbjct: 253 FVVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYISPHCKPLSESPQ 312

Query: 123 TPLYRCVSVKEYFTMKAKNNGEGLSTIKI 151
           TPLYRCVSVKEYFTMKAKNNGEGLST+KI
Sbjct: 313 TPLYRCVSVKEYFTMKAKNNGEGLSTVKI 341

[Close]

BLAST of Cp4.1LG07g01930 vs. NCBI nr
Match: KAG6585440.1 (Gibberellin 3-beta-dioxygenase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 303 bits (776), Expect = 5.26e-101
Identity = 144/149 (96.64%), Postives = 147/149 (98.66%), Query Frame = 0


Query: 3   SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGS 62
           SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGW+PLSPMRGS
Sbjct: 193 SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGS 252

Query: 63  FVVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQ 122
           FVVNVGDLLHIMSNGRF+SILHRVTIQGKKVHRFSLAYFYYPPPYLYI+PH K LSESPQ
Sbjct: 253 FVVNVGDLLHIMSNGRFQSILHRVTIQGKKVHRFSLAYFYYPPPYLYISPHSKPLSESPQ 312

Query: 123 TPLYRCVSVKEYFTMKAKNNGEGLSTIKI 151
           TPLYRCVSVKEYFTMKAKNNGEGLSTIKI
Sbjct: 313 TPLYRCVSVKEYFTMKAKNNGEGLSTIKI 341

[Close]

BLAST of Cp4.1LG07g01930 vs. NCBI nr
Match: XP_023002882.1 (gibberellin 3-beta-dioxygenase 1-like [Cucurbita maxima])

HSP 1 Score: 297 bits (761), Expect = 9.96e-99
Identity = 140/149 (93.96%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 3   SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGS 62
           SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQ CNDGLQIFKD+A W+PLSPMRGS
Sbjct: 193 SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQVCNDGLQIFKDRASWVPLSPMRGS 252

Query: 63  FVVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQ 122
           FVVNVGDLLHIMSNGRF SILHRVTIQGKKVHRFSLAYFYYPPPYLYI+PHCK LSESPQ
Sbjct: 253 FVVNVGDLLHIMSNGRFPSILHRVTIQGKKVHRFSLAYFYYPPPYLYISPHCKPLSESPQ 312

Query: 123 TPLYRCVSVKEYFTMKAKNNGEGLSTIKI 151
            PLYRCVSV+EYFTMKAKNNGEGLSTIKI
Sbjct: 313 APLYRCVSVEEYFTMKAKNNGEGLSTIKI 341

[Close]

BLAST of Cp4.1LG07g01930 vs. ExPASy TrEMBL
Match: A0A6J1GIY0 (gibberellin 3-beta-dioxygenase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454608 PE=3 SV=1)

HSP 1 Score: 308 bits (789), Expect = 2.70e-103
Identity = 145/149 (97.32%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 3   SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGS 62
           SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGW+PLSPMRGS
Sbjct: 193 SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWVPLSPMRGS 252

Query: 63  FVVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQ 122
           FVVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYI+PHCK LSESPQ
Sbjct: 253 FVVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYISPHCKPLSESPQ 312

Query: 123 TPLYRCVSVKEYFTMKAKNNGEGLSTIKI 151
           TPLYRCVSVKEYFTMKAKNNGEGLST+KI
Sbjct: 313 TPLYRCVSVKEYFTMKAKNNGEGLSTVKI 341

[Close]

BLAST of Cp4.1LG07g01930 vs. ExPASy TrEMBL
Match: A0A6J1KKU0 (gibberellin 3-beta-dioxygenase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496619 PE=3 SV=1)

HSP 1 Score: 297 bits (761), Expect = 4.82e-99
Identity = 140/149 (93.96%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 3   SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGS 62
           SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQ CNDGLQIFKD+A W+PLSPMRGS
Sbjct: 193 SYTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQVCNDGLQIFKDRASWVPLSPMRGS 252

Query: 63  FVVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQ 122
           FVVNVGDLLHIMSNGRF SILHRVTIQGKKVHRFSLAYFYYPPPYLYI+PHCK LSESPQ
Sbjct: 253 FVVNVGDLLHIMSNGRFPSILHRVTIQGKKVHRFSLAYFYYPPPYLYISPHCKPLSESPQ 312

Query: 123 TPLYRCVSVKEYFTMKAKNNGEGLSTIKI 151
            PLYRCVSV+EYFTMKAKNNGEGLSTIKI
Sbjct: 313 APLYRCVSVEEYFTMKAKNNGEGLSTIKI 341

[Close]

BLAST of Cp4.1LG07g01930 vs. ExPASy TrEMBL
Match: A0A6J1BUZ4 (gibberellin 3-beta-dioxygenase 1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111004962 PE=3 SV=1)

HSP 1 Score: 253 bits (645), Expect = 1.99e-81
Identity = 120/148 (81.08%), Postives = 132/148 (89.19%), Query Frame = 0


Query: 4   YTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGSF 63
           YTAL+LNSYPPCPDP QVMGLAAHTDTSLFTI+HQA  DGLQ+FKD+ GWIPLSPM G+ 
Sbjct: 197 YTALRLNSYPPCPDPSQVMGLAAHTDTSLFTILHQARIDGLQVFKDEVGWIPLSPMSGTL 256

Query: 64  VVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQT 123
           VVN+GDLLHI+SNGRFRSILHRV IQGK+ HR S+AYFYYPP  LYI+PHC  LSESPQT
Sbjct: 257 VVNIGDLLHILSNGRFRSILHRVVIQGKE-HRLSMAYFYYPPNELYISPHCNPLSESPQT 316

Query: 124 PLYRCVSVKEYFTMKAKNNGEGLSTIKI 151
           PLYRCV V+EYF+MKAKN G GLSTIKI
Sbjct: 317 PLYRCVKVREYFSMKAKNMGRGLSTIKI 343

[Close]

BLAST of Cp4.1LG07g01930 vs. ExPASy TrEMBL
Match: A0A6J1BSK2 (gibberellin 3-beta-dioxygenase 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004962 PE=3 SV=1)

HSP 1 Score: 253 bits (645), Expect = 2.39e-81
Identity = 120/148 (81.08%), Postives = 132/148 (89.19%), Query Frame = 0


Query: 4   YTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGSF 63
           YTAL+LNSYPPCPDP QVMGLAAHTDTSLFTI+HQA  DGLQ+FKD+ GWIPLSPM G+ 
Sbjct: 203 YTALRLNSYPPCPDPSQVMGLAAHTDTSLFTILHQARIDGLQVFKDEVGWIPLSPMSGTL 262

Query: 64  VVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQT 123
           VVN+GDLLHI+SNGRFRSILHRV IQGK+ HR S+AYFYYPP  LYI+PHC  LSESPQT
Sbjct: 263 VVNIGDLLHILSNGRFRSILHRVVIQGKE-HRLSMAYFYYPPNELYISPHCNPLSESPQT 322

Query: 124 PLYRCVSVKEYFTMKAKNNGEGLSTIKI 151
           PLYRCV V+EYF+MKAKN G GLSTIKI
Sbjct: 323 PLYRCVKVREYFSMKAKNMGRGLSTIKI 349

[Close]

BLAST of Cp4.1LG07g01930 vs. ExPASy TrEMBL
Match: Q9LM06 (Putative gibberellin 3 beta hydroxylase OS=Citrullus lanatus OX=3654 GN=WGA3H PE=2 SV=1)

HSP 1 Score: 239 bits (610), Expect = 4.71e-76
Identity = 113/148 (76.35%), Postives = 127/148 (85.81%), Query Frame = 0


Query: 4   YTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGSF 63
           Y AL+LNSYPPCPDP +VMGLAAHTDTSLFTIVHQA +DGLQ+FKD  GW+PLSPM G+ 
Sbjct: 202 YMALRLNSYPPCPDPSRVMGLAAHTDTSLFTIVHQARHDGLQVFKDGTGWVPLSPMSGTL 261

Query: 64  VVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQT 123
           +VNVGD+LHI+SNGRF SILHRV I   K HRFSLAYFY PP  LYI+P+CK LSESPQ 
Sbjct: 262 IVNVGDILHILSNGRFPSILHRVMIHENKEHRFSLAYFYDPPGDLYISPYCKPLSESPQI 321

Query: 124 PLYRCVSVKEYFTMKAKNNGEGLSTIKI 151
           PLYRCV+VKEYFT+KAK  G+GLS IKI
Sbjct: 322 PLYRCVNVKEYFTIKAKKEGKGLSAIKI 349

[Close]

BLAST of Cp4.1LG07g01930 vs. TAIR 10
Match: AT1G80340.1 (gibberellin 3-oxidase 2 )

HSP 1 Score: 141.7 bits (356), Expect = 4.7e-34
Identity = 70/144 (48.61%), Postives = 98/144 (68.06%), Query Frame = 0


Query: 7   LQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGSFVVN 66
           +QLN YP CP+PD+ MGLAAHTD++L TI++Q    GLQ+F+D  GW+   P+ GS VVN
Sbjct: 205 IQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQNNTAGLQVFRDDVGWVTAPPVPGSLVVN 264

Query: 67  VGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQTPLY 126
           VGDLLHI++NG F S+LHR  +   +  RFS+AY + PP  + I+P  K L +  Q+PLY
Sbjct: 265 VGDLLHILTNGIFPSVLHRARVNHVR-SRFSMAYLWGPPSDIMISPLPK-LVDPLQSPLY 324

Query: 127 RCVSVKEYFTMKAKNNGEGLSTIK 151
             ++ K+Y   KA +  + LS I+
Sbjct: 325 PSLTWKQYLATKATHFNQSLSIIR 346

[Close]

BLAST of Cp4.1LG07g01930 vs. TAIR 10
Match: AT1G15550.1 (gibberellin 3-oxidase 1 )

HSP 1 Score: 140.6 bits (353), Expect = 1.0e-33
Identity = 70/145 (48.28%), Postives = 98/145 (67.59%), Query Frame = 0


Query: 6   ALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGSFVV 65
           ALQLN YP CP+PD+ MGLAAHTD++L TI++Q    GLQ+F+D  GW+ + P  GS VV
Sbjct: 211 ALQLNHYPVCPEPDRAMGLAAHTDSTLLTILYQNNTAGLQVFRDDLGWVTVPPFPGSLVV 270

Query: 66  NVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQTPL 125
           NVGDL HI+SNG F+S+LHR  +   +  R S+A+ + P   + I+P  K +S   ++PL
Sbjct: 271 NVGDLFHILSNGLFKSVLHRARVNQTRA-RLSVAFLWGPQSDIKISPVPKLVS-PVESPL 330

Query: 126 YRCVSVKEYFTMKAKNNGEGLSTIK 151
           Y+ V+ KEY   KA +  + LS I+
Sbjct: 331 YQSVTWKEYLRTKATHFNKALSMIR 353

[Close]

BLAST of Cp4.1LG07g01930 vs. TAIR 10
Match: AT1G80330.1 (gibberellin 3-oxidase 4 )

HSP 1 Score: 124.4 bits (311), Expect = 7.8e-29
Identity = 59/147 (40.14%), Postives = 96/147 (65.31%), Query Frame = 0


Query: 6   ALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQIFKDKAGWIPLSPMRGSFVV 65
           A++LN YP CP+P++ MGLAAHTD+++ TI+HQ+   GLQ+F++++GW+ + P  G  VV
Sbjct: 206 AIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSNTGGLQVFREESGWVTVEPAPGVLVV 265

Query: 66  NVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFY-YPPPYLYITPHCKALSESPQTP 125
           N+GDL HI+SNG+  S++HR  +   +  R S+AY +  P   + I P  K L+   +  
Sbjct: 266 NIGDLFHILSNGKIPSVVHRAKVNHTR-SRISIAYLWGGPAGDVQIAPISK-LTGPAEPS 325

Query: 126 LYRCVSVKEYFTMKAKNNGEGLSTIKI 152
           LYR ++ KEY  +K +   + +  I++
Sbjct: 326 LYRSITWKEYLQIKYEVFDKAMDAIRV 350

[Close]

BLAST of Cp4.1LG07g01930 vs. TAIR 10
Match: AT4G21690.1 (gibberellin 3-oxidase 3 )

HSP 1 Score: 120.2 bits (300), Expect = 1.5e-27
Identity = 67/147 (45.58%), Postives = 89/147 (60.54%), Query Frame = 0


Query: 7   LQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACNDGLQI---FKDKAGWIPLSPMRGSF 66
           LQLNSYP CPDP   MGLA HTD+SL TI++Q    GL+I    ++ + WI + P+ GS 
Sbjct: 206 LQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGNIPGLEIESPQEEGSRWIGVEPIEGSL 265

Query: 67  VVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQT 126
           VV +GDL HI+SNG+FRS +HR  +  K  HR S AYF  PP  L I P     S+    
Sbjct: 266 VVIMGDLSHIISNGQFRSTMHRAVV-NKTHHRVSAAYFAGPPKNLQIGP---LTSDKNHP 325

Query: 127 PLYRCVSVKEYFTMKAKNNGEGLSTIK 151
           P+YR +  +EY   KA +  + L+  +
Sbjct: 326 PIYRRLIWEEYLAAKATHFNKALTLFR 348

[Close]

BLAST of Cp4.1LG07g01930 vs. TAIR 10
Match: AT1G78550.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 2.6e-24
Identity = 57/133 (42.86%), Postives = 86/133 (64.66%), Query Frame = 0


Query: 4   YTALQLNSYPPCPDPDQVMGLAAHTDTSLFTIVHQACN-DGLQIFKDKAGWIPLSPMRGS 63
           + ++++N YPPCP PDQVMGL  H+D +  TI+ Q    +GLQI KD   W+ + P+R +
Sbjct: 208 WQSIKINYYPPCPQPDQVMGLTQHSDAAGLTILLQVNQVEGLQIKKD-GKWVVVKPLRDA 267

Query: 64  FVVNVGDLLHIMSNGRFRSILHRVTIQGKKVHRFSLAYFYYPPPYLYITPHCKALSESPQ 123
            VVNVG++L I++NGR+RSI HR  +  +K  R S+A F+ P     I P  K+L +  +
Sbjct: 268 LVVNVGEILEIITNGRYRSIEHRAVVNSEK-ERLSVAMFHSPGKETIIRP-AKSLVDRQK 327

Query: 124 TPLYRCVSVKEYF 136
             L++ +S +EYF
Sbjct: 328 QCLFKSMSTQEYF 337

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g01930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24648	4.1e-35	49.32	Gibberellin 3-beta-dioxygenase 1 OS=Pisum sativum OX=3888 GN=LE PE=1 SV=1	[more]
Q9ZT84	6.6e-33	48.61	Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana OX=3702 GN=GA3OX2 PE=1 ...	[more]
Q39103	1.5e-32	48.28	Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana OX=3702 GN=GA3OX1 PE=1 ...	[more]
Q9C971	1.1e-27	40.14	Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana OX=3702 GN=GA3OX4 PE=1 ...	[more]
Q9SVS8	2.1e-26	45.58	Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana OX=3702 GN=GA3OX3 PE=2 ...	[more]

BLAST of Cp4.1LG07g01930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023522671.1	3.54e-107	100.00	gibberellin 3-beta-dioxygenase 1-like, partial [Cucurbita pepo subsp. pepo]	[more]
XP_023537854.1	1.19e-104	100.00	gibberellin 3-beta-dioxygenase 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022951873.1	5.58e-103	97.32	gibberellin 3-beta-dioxygenase 1-like [Cucurbita moschata]	[more]
KAG6585440.1	5.26e-101	96.64	Gibberellin 3-beta-dioxygenase 1, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023002882.1	9.96e-99	93.96	gibberellin 3-beta-dioxygenase 1-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG07g01930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GIY0	2.70e-103	97.32	gibberellin 3-beta-dioxygenase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454...	[more]
A0A6J1KKU0	4.82e-99	93.96	gibberellin 3-beta-dioxygenase 1-like OS=Cucurbita maxima OX=3661 GN=LOC11149661...	[more]
A0A6J1BUZ4	1.99e-81	81.08	gibberellin 3-beta-dioxygenase 1-like isoform X2 OS=Momordica charantia OX=3673 ...	[more]
A0A6J1BSK2	2.39e-81	81.08	gibberellin 3-beta-dioxygenase 1-like isoform X1 OS=Momordica charantia OX=3673 ...	[more]
Q9LM06	4.71e-76	76.35	Putative gibberellin 3 beta hydroxylase OS=Citrullus lanatus OX=3654 GN=WGA3H PE...	[more]

BLAST of Cp4.1LG07g01930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80340.1	4.7e-34	48.61	gibberellin 3-oxidase 2	[more]
AT1G15550.1	1.0e-33	48.28	gibberellin 3-oxidase 1	[more]
AT1G80330.1	7.8e-29	40.14	gibberellin 3-oxidase 4	[more]
AT4G21690.1	1.5e-27	45.58	gibberellin 3-oxidase 3	[more]
AT1G78550.1	2.6e-24	42.86	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044861	Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain	PFAM	PF03171	2OG-FeII_Oxy	coord: 7..102 e-value: 5.0E-26 score: 91.1
IPR027443	Isopenicillin N synthase-like superfamily	GENE3D	2.60.120.330		coord: 1..149 e-value: 1.2E-41 score: 145.0
None	No IPR available	PANTHER	PTHR47991:SF77	GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE	coord: 4..142
None	No IPR available	PANTHER	PTHR47991	OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE	coord: 4..142
None	No IPR available	SUPERFAMILY	51197	Clavaminate synthase-like	coord: 3..147
IPR005123	Oxoglutarate/iron-dependent dioxygenase	PROSITE	PS51471	FE2OG_OXY	coord: 3..104 score: 12.072969

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g01930.1	Cp4.1LG07g01930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0051213	dioxygenase activity
molecular_function	GO:0046872	metal ion binding