Cp4.1LG07g01860 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGTTCTCATCGGTCCTCCCTCTTTCACCATCCAGGTTGCCTCTTCTTCGTCTTTTGTCAGAGATCGGACCGCTGCTTCTCCGCTCCCGCCGCCGCTGGATCATGCTCTTGATTCGCCTTGGAACTGTTTCAATTCTTTCCGAACTTACGCTGTCCGTAAAGCTCCGGAGGATGAAATCGATTACCGTTCTGATTCCTCTTCCTCGATCGGAGTTCCTGATGGTGATGAGAGCGAGGATGAGAGCATTTCGTCCACTGGTGGAGATCAAGAGGAGGAGGTTCGGAGTAAACTGGATTCAGGATTCGCGTCTCTCGGATCGTTGGAAGAGTCTCTTCCGATTAAGTGAGTCCGAATTTAATTTTACCGTTTCTTTGCGTTTTCTTCCTTTGTTGTTTGATCGATTAACTGATGGAGATAACTTCAATCACTCGATTCGATTAAAATGCTAAAAGACGTTTTCCTCTTCAATCTGCTGGTCTCAAGAGTTCTATTGCATTTTTAAATCAGGAGAGGCTTATCGAGTCACTTTTCTGGAAAATTGAAATCGTTTGCGAATCTAGCAGAGGCGAAATCAGTAAAAGACATTGTGAAACCTGAAAACTCTTTTAATAAGAGAAGAAGAATTTTGATTGCGTCAAAATTGGCTAAGAAATCGTCGTTCTACACCTGGCAGAACCCTAAGTCGATGCCTCTGTTAGCGCTCAGAGAAGTAGATGATGATGATGATGATGATGGCGACGAAGAAGAAAAAAAATCACCTGCTTCATATTCTTCAGAAGATAATGAAGATGAAGATGAAGAACCGAAAATAAAAAGAGTTTCAGATTTTCATCGAAGACGGTTTATGAGCTTCAAGTCGAGATGCTTTTCTCTGGCGGATCTGCAACAGCGGCACCATCAACCACAAGAACATTAA ATGGAGGTTCTCATCGGTCCTCCCTCTTTCACCATCCAGGTTGCCTCTTCTTCGTCTTTTGTCAGAGATCGGACCGCTGCTTCTCCGCTCCCGCCGCCGCTGGATCATGCTCTTGATTCGCCTTGGAACTGTTTCAATTCTTTCCGAACTTACGCTGTCCAGGCGAAATCAGTAAAAGACATTGTGAAACCTGAAAACTCTTTTAATAAGAGAAGAAGAATTTTGATTGCGTCAAAATTGGCTAAGAAATCGTCGTTCTACACCTGGCAGAACCCTAAGTCGATGCCTCTGTTAGCGCTCAGAGAAGTAGATGATGATGATGATGATGATGGCGACGAAGAAGAAAAAAAATCACCTGCTTCATATTCTTCAGAAGATAATGAAGATGAAGATGAAGAACCGAAAATAAAAAGAGTTTCAGATTTTCATCGAAGACGGTTTATGAGCTTCAAGTCGAGATGCTTTTCTCTGGCGGATCTGCAACAGCGGCACCATCAACCACAAGAACATTAA ATGGAGGTTCTCATCGGTCCTCCCTCTTTCACCATCCAGGTTGCCTCTTCTTCGTCTTTTGTCAGAGATCGGACCGCTGCTTCTCCGCTCCCGCCGCCGCTGGATCATGCTCTTGATTCGCCTTGGAACTGTTTCAATTCTTTCCGAACTTACGCTGTCCAGGCGAAATCAGTAAAAGACATTGTGAAACCTGAAAACTCTTTTAATAAGAGAAGAAGAATTTTGATTGCGTCAAAATTGGCTAAGAAATCGTCGTTCTACACCTGGCAGAACCCTAAGTCGATGCCTCTGTTAGCGCTCAGAGAAGTAGATGATGATGATGATGATGATGGCGACGAAGAAGAAAAAAAATCACCTGCTTCATATTCTTCAGAAGATAATGAAGATGAAGATGAAGAACCGAAAATAAAAAGAGTTTCAGATTTTCATCGAAGACGGTTTATGAGCTTCAAGTCGAGATGCTTTTCTCTGGCGGATCTGCAACAGCGGCACCATCAACCACAAGAACATTAA MEVLIGPPSFTIQVASSSSFVRDRTAASPLPPPLDHALDSPWNCFNSFRTYAVQAKSVKDIVKPENSFNKRRRILIASKLAKKSSFYTWQNPKSMPLLALREVDDDDDDDGDEEEKKSPASYSSEDNEDEDEEPKIKRVSDFHRRRFMSFKSRCFSLADLQQRHHQPQEH Homology
BLAST of Cp4.1LG07g01860 vs. NCBI nr
Match: XP_023537797.1 (uncharacterized protein LOC111798715 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 297 bits (760), Expect = 1.56e-99 Identity = 169/251 (67.33%), Postives = 170/251 (67.73%), Query Frame = 0
BLAST of Cp4.1LG07g01860 vs. NCBI nr
Match: XP_022951519.1 (uncharacterized protein LOC111454311 [Cucurbita moschata]) HSP 1 Score: 284 bits (727), Expect = 1.69e-94 Identity = 166/252 (65.87%), Postives = 167/252 (66.27%), Query Frame = 0
BLAST of Cp4.1LG07g01860 vs. NCBI nr
Match: KAG6585427.1 (hypothetical protein SDJN03_18160, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 282 bits (722), Expect = 9.74e-94 Identity = 165/251 (65.74%), Postives = 166/251 (66.14%), Query Frame = 0
BLAST of Cp4.1LG07g01860 vs. NCBI nr
Match: KAG7020348.1 (hypothetical protein SDJN02_17032 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 278 bits (710), Expect = 6.73e-92 Identity = 165/252 (65.48%), Postives = 166/252 (65.87%), Query Frame = 0
BLAST of Cp4.1LG07g01860 vs. NCBI nr
Match: XP_023002480.1 (uncharacterized protein LOC111496305 [Cucurbita maxima]) HSP 1 Score: 269 bits (688), Expect = 1.31e-88 Identity = 161/252 (63.89%), Postives = 163/252 (64.68%), Query Frame = 0
BLAST of Cp4.1LG07g01860 vs. ExPASy TrEMBL
Match: A0A6J1GJ08 (uncharacterized protein LOC111454311 OS=Cucurbita moschata OX=3662 GN=LOC111454311 PE=4 SV=1) HSP 1 Score: 284 bits (727), Expect = 8.18e-95 Identity = 166/252 (65.87%), Postives = 167/252 (66.27%), Query Frame = 0
BLAST of Cp4.1LG07g01860 vs. ExPASy TrEMBL
Match: A0A6J1KP27 (uncharacterized protein LOC111496305 OS=Cucurbita maxima OX=3661 GN=LOC111496305 PE=4 SV=1) HSP 1 Score: 269 bits (688), Expect = 6.32e-89 Identity = 161/252 (63.89%), Postives = 163/252 (64.68%), Query Frame = 0
BLAST of Cp4.1LG07g01860 vs. ExPASy TrEMBL
Match: A0A6J1BUU2 (uncharacterized protein LOC111004943 OS=Momordica charantia OX=3673 GN=LOC111004943 PE=4 SV=1) HSP 1 Score: 188 bits (477), Expect = 5.52e-57 Identity = 121/246 (49.19%), Postives = 136/246 (55.28%), Query Frame = 0
BLAST of Cp4.1LG07g01860 vs. ExPASy TrEMBL
Match: A0A1S3BCK4 (protein ENL-like OS=Cucumis melo OX=3656 GN=LOC103488223 PE=4 SV=1) HSP 1 Score: 179 bits (455), Expect = 1.04e-53 Identity = 117/232 (50.43%), Postives = 133/232 (57.33%), Query Frame = 0
BLAST of Cp4.1LG07g01860 vs. ExPASy TrEMBL
Match: A0A6J1HC13 (uncharacterized protein LOC111462633 OS=Cucurbita moschata OX=3662 GN=LOC111462633 PE=4 SV=1) HSP 1 Score: 181 bits (459), Expect = 1.14e-53 Identity = 121/245 (49.39%), Postives = 131/245 (53.47%), Query Frame = 0
BLAST of Cp4.1LG07g01860 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 85.9 bits (211), Expect = 3.4e-17 Identity = 52/105 (49.52%), Postives = 72/105 (68.57%), Query Frame = 0
BLAST of Cp4.1LG07g01860 vs. TAIR 10
Match: AT2G24550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 4.8e-11 Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = 0
BLAST of Cp4.1LG07g01860 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 64.7 bits (156), Expect = 8.2e-11 Identity = 48/118 (40.68%), Postives = 71/118 (60.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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