Cp4.1LG07g01720 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g01720
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Ribosomal RNA small subunit methyltransferase A
Location	Cp4.1LG07: 1033627 .. 1034139 (+)
RNA-Seq Expression	Cp4.1LG07g01720
Synteny	Cp4.1LG07g01720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGTGGCATTTCCCCAACTCTCCTGGTGGTCGTGGAGCGGGAAGCATAAAGAACCTCGAACCTCTAATGGATCCGCTTTTAATGCTTCACTAGATACAGTCATTCGGGAACCGGATACTCTAAAATTTCCTTTAGCAAATGGTGCCAACATATCATCGTCGTCTAGAAGGGTGAGGCGGAAATGGCATAGTCGAGAAGAAAGGAAAATTGATAGGGAATACGACATTGTTCTTGTTCCATCTGATGGAGGATGTGTTTCAGGGTCAGAATCTGATGATTCGGATTGGTCAATTGGATGGTCAGAACCCCATGGACCTGGATTCCAGAGCGATGATGAAACAGACAACAGTTTTGCAGTACTGGTTCCATGTTATGGACGCGTTTACAATGATTTTGTGGATGAAACAAAGAACAGTATCCTAAGTGCTGCTGGGAACATCAACGATAGCTTTTCTGCAGGTAAGAGTTGCTTCTTCCATGCTTGCATTTGGATTGGGGTTGGGTGTTAG

mRNA sequence

ATGTCTGTGGCATTTCCCCAACTCTCCTGGTGGTCGTGGAGCGGGAAGCATAAAGAACCTCGAACCTCTAATGGATCCGCTTTTAATGCTTCACTAGATACAGTCATTCGGGAACCGGATACTCTAAAATTTCCTTTAGCAAATGGTGCCAACATATCATCGTCGTCTAGAAGGGTGAGGCGGAAATGGCATAGTCGAGAAGAAAGGAAAATTGATAGGGAATACGACATTGTTCTTGTTCCATCTGATGGAGGATGTGTTTCAGGGTCAGAATCTGATGATTCGGATTGGTCAATTGGATGGTCAGAACCCCATGGACCTGGATTCCAGAGCGATGATGAAACAGACAACAGTTTTGCAGTACTGGTTCCATGTTATGGACGCGTTTACAATGATTTTGTGGATGAAACAAAGAACAGTATCCTAAGTGCTGCTGGGAACATCAACGATAGCTTTTCTGCAGGTAAGAGTTGCTTCTTCCATGCTTGCATTTGGATTGGGGTTGGGTGTTAG

Coding sequence (CDS)

ATGTCTGTGGCATTTCCCCAACTCTCCTGGTGGTCGTGGAGCGGGAAGCATAAAGAACCTCGAACCTCTAATGGATCCGCTTTTAATGCTTCACTAGATACAGTCATTCGGGAACCGGATACTCTAAAATTTCCTTTAGCAAATGGTGCCAACATATCATCGTCGTCTAGAAGGGTGAGGCGGAAATGGCATAGTCGAGAAGAAAGGAAAATTGATAGGGAATACGACATTGTTCTTGTTCCATCTGATGGAGGATGTGTTTCAGGGTCAGAATCTGATGATTCGGATTGGTCAATTGGATGGTCAGAACCCCATGGACCTGGATTCCAGAGCGATGATGAAACAGACAACAGTTTTGCAGTACTGGTTCCATGTTATGGACGCGTTTACAATGATTTTGTGGATGAAACAAAGAACAGTATCCTAAGTGCTGCTGGGAACATCAACGATAGCTTTTCTGCAGGTAAGAGTTGCTTCTTCCATGCTTGCATTTGGATTGGGGTTGGGTGTTAG

Protein sequence

MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVRRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFAVLVPCYGRVYNDFVDETKNSILSAAGNINDSFSAGKSCFFHACIWIGVGC

Homology

[Close]

BLAST of Cp4.1LG07g01720 vs. NCBI nr
Match: KAG7020253.1 (hypothetical protein SDJN02_16936, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358 bits (920), Expect = 3.85e-125
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR 60
           MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR
Sbjct: 1   MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR 60

Query: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA 120
           RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA
Sbjct: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA 120

Query: 121 VLVPCYGRVYNDFVDETKNSILSAAGNINDSFSAGKSCFFHACIWIGVGC 170
           VLVPCYGRVYNDFVDETKNSILSA+GNINDSFSAGKSCFFHACIWIGVGC
Sbjct: 121 VLVPCYGRVYNDFVDETKNSILSASGNINDSFSAGKSCFFHACIWIGVGC 170

[Close]

BLAST of Cp4.1LG07g01720 vs. NCBI nr
Match: XP_023001877.1 (uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023001878.1 uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023001879.1 uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023001880.1 uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023536720.1 uncharacterized protein LOC111798013 [Cucurbita pepo subsp. pepo] >XP_023536721.1 uncharacterized protein LOC111798013 [Cucurbita pepo subsp. pepo] >XP_023536722.1 uncharacterized protein LOC111798013 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321 bits (823), Expect = 2.40e-110
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR 60
           MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR
Sbjct: 1   MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR 60

Query: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA 120
           RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA
Sbjct: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA 120

Query: 121 VLVPCYGRVYNDFVDETKNSILSAAGNINDSFSA 154
           VLVPCYGRVYNDFVDETKNSILSAAGNINDSFSA
Sbjct: 121 VLVPCYGRVYNDFVDETKNSILSAAGNINDSFSA 154

[Close]

BLAST of Cp4.1LG07g01720 vs. NCBI nr
Match: XP_022951746.1 (uncharacterized protein LOC111454487 [Cucurbita moschata] >XP_022951747.1 uncharacterized protein LOC111454487 [Cucurbita moschata])

HSP 1 Score: 320 bits (820), Expect = 6.87e-110
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR 60
           MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR
Sbjct: 1   MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR 60

Query: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA 120
           RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA
Sbjct: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA 120

Query: 121 VLVPCYGRVYNDFVDETKNSILSAAGNINDSFSA 154
           VLVPCYGRVYNDFVDETKNSILSA+GNINDSFSA
Sbjct: 121 VLVPCYGRVYNDFVDETKNSILSASGNINDSFSA 154

[Close]

BLAST of Cp4.1LG07g01720 vs. NCBI nr
Match: KAG6585342.1 (hypothetical protein SDJN03_18075, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 318 bits (815), Expect = 3.97e-109
Identity = 152/154 (98.70%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR 60
           MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR
Sbjct: 1   MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR 60

Query: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA 120
           RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGF SDDETDNSFA
Sbjct: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFHSDDETDNSFA 120

Query: 121 VLVPCYGRVYNDFVDETKNSILSAAGNINDSFSA 154
           VLVPCYGRVYNDFVDETKNSILSA+GNINDSFSA
Sbjct: 121 VLVPCYGRVYNDFVDETKNSILSASGNINDSFSA 154

[Close]

BLAST of Cp4.1LG07g01720 vs. NCBI nr
Match: KAA0065096.1 (Ribosomal RNA small subunit methyltransferase A [Cucumis melo var. makuwa])

HSP 1 Score: 316 bits (810), Expect = 2.38e-108
Identity = 151/171 (88.30%), Postives = 158/171 (92.40%), Query Frame = 0


Query: 1   MSVAFPQLSWWSWSGKHKEPRTSNG-SAFNASLDTVIREPDTLKFPLANGANISSSSRRV 60
           MSVAFPQLSWW WSGKHKEPR+SNG SA NASLDT  RE DTLKFPL NGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 61  RRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSF 120
           +RKWHSREERK+DREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDE+DNSF
Sbjct: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRVYNDFVDETKNSILSAAGNINDSFSAGKSCFFHACIWIGVGC 170
           AVLVPCYGR+YNDFVDETKNSILSA GNINDSFSAGKSCFF +   +GV C
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAGKSCFFSSLHLVGVAC 171

[Close]

BLAST of Cp4.1LG07g01720 vs. ExPASy TrEMBL
Match: A0A6J1KME1 (uncharacterized protein LOC111495931 OS=Cucurbita maxima OX=3661 GN=LOC111495931 PE=4 SV=1)

HSP 1 Score: 321 bits (823), Expect = 1.16e-110
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR 60
           MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR
Sbjct: 1   MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR 60

Query: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA 120
           RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA
Sbjct: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA 120

Query: 121 VLVPCYGRVYNDFVDETKNSILSAAGNINDSFSA 154
           VLVPCYGRVYNDFVDETKNSILSAAGNINDSFSA
Sbjct: 121 VLVPCYGRVYNDFVDETKNSILSAAGNINDSFSA 154

[Close]

BLAST of Cp4.1LG07g01720 vs. ExPASy TrEMBL
Match: A0A6J1GID2 (uncharacterized protein LOC111454487 OS=Cucurbita moschata OX=3662 GN=LOC111454487 PE=4 SV=1)

HSP 1 Score: 320 bits (820), Expect = 3.32e-110
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR 60
           MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR
Sbjct: 1   MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR 60

Query: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA 120
           RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA
Sbjct: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA 120

Query: 121 VLVPCYGRVYNDFVDETKNSILSAAGNINDSFSA 154
           VLVPCYGRVYNDFVDETKNSILSA+GNINDSFSA
Sbjct: 121 VLVPCYGRVYNDFVDETKNSILSASGNINDSFSA 154

[Close]

BLAST of Cp4.1LG07g01720 vs. ExPASy TrEMBL
Match: A0A5A7VFJ3 (Ribosomal RNA small subunit methyltransferase A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004290 PE=4 SV=1)

HSP 1 Score: 316 bits (810), Expect = 1.15e-108
Identity = 151/171 (88.30%), Postives = 158/171 (92.40%), Query Frame = 0


Query: 1   MSVAFPQLSWWSWSGKHKEPRTSNG-SAFNASLDTVIREPDTLKFPLANGANISSSSRRV 60
           MSVAFPQLSWW WSGKHKEPR+SNG SA NASLDT  RE DTLKFPL NGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 61  RRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSF 120
           +RKWHSREERK+DREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDE+DNSF
Sbjct: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRVYNDFVDETKNSILSAAGNINDSFSAGKSCFFHACIWIGVGC 170
           AVLVPCYGR+YNDFVDETKNSILSA GNINDSFSAGKSCFF +   +GV C
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAGKSCFFSSLHLVGVAC 171

[Close]

BLAST of Cp4.1LG07g01720 vs. ExPASy TrEMBL
Match: A0A1S3BB05 (uncharacterized protein LOC103488121 OS=Cucumis melo OX=3656 GN=LOC103488121 PE=4 SV=1)

HSP 1 Score: 296 bits (758), Expect = 9.75e-101
Identity = 142/155 (91.61%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MSVAFPQLSWWSWSGKHKEPRTSNG-SAFNASLDTVIREPDTLKFPLANGANISSSSRRV 60
           MSVAFPQLSWW WSGKHKEPR+SNG SA NASLDT  RE DTLKFPL NGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 61  RRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSF 120
           +RKWHSREERK+DREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDE+DNSF
Sbjct: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRVYNDFVDETKNSILSAAGNINDSFSA 154
           AVLVPCYGR+YNDFVDETKNSILSA GNINDSFSA
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSA 155

[Close]

BLAST of Cp4.1LG07g01720 vs. ExPASy TrEMBL
Match: A0A0A0LLD0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370490 PE=4 SV=1)

HSP 1 Score: 296 bits (758), Expect = 1.53e-100
Identity = 142/155 (91.61%), Postives = 147/155 (94.84%), Query Frame = 0


Query: 1   MSVAFPQLSWWSWSGKHKEPRTSNG-SAFNASLDTVIREPDTLKFPLANGANISSSSRRV 60
           MSVAFPQLSWW WSGKHKEPR+SNG SA NASLDT  RE DTLKFPL NGAN+SSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV 60

Query: 61  RRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSF 120
           +RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDE+DNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRVYNDFVDETKNSILSAAGNINDSFSA 154
           AVLVPCYGR+YNDFVDETKNSILSA GNINDSFSA
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSA 155

[Close]

BLAST of Cp4.1LG07g01720 vs. TAIR 10
Match: AT5G65480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 6.1e-14
Identity = 48/145 (33.10%), Postives = 68/145 (46.90%), Query Frame = 0


Query: 1   MSVAFPQLSWWSWSGKHKEPRTSNGSAFNASLDTVIREPDTLKFPLANGANISSSSRRVR 60
           M+V+FP+L  W   G + + R    S    S       P   K   +   + SSS ++ +
Sbjct: 1   MAVSFPRLPRWLCGGSNTKDREKKESIPKGSSSL---SPSLKKTTTSKTGSSSSSVKKTK 60

Query: 61  RKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDETDNSFA 120
           R W  R       E D +      G V   E DD +WSIGW EPHGPGF+++D+    F 
Sbjct: 61  RGWIGRGGSGSGGEEDKI------GNVVFPEPDDPEWSIGWVEPHGPGFKAEDDDCGGFV 120

Query: 121 VLVPCYGRVYNDFVDETKNSILSAA 146
           VLVP Y +V +   ++  N   S A
Sbjct: 121 VLVPLYKKVMDGSGNQIPNGFFSPA 136

[Close]

BLAST of Cp4.1LG07g01720 vs. TAIR 10
Match: AT4G38060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-10
Identity = 36/75 (48.00%), Postives = 43/75 (57.33%), Query Frame = 0


Query: 88  SGSES------DDSDWSIGWSEPHGPGFQSDDE-TDNSFAVLVPCYGRVYNDFVDETKNS 147
           SGSES      D  +WS+GW+EPHGP FQSDDE  D  F VLVPCY R   +      N 
Sbjct: 48  SGSESVDVVAGDGPEWSVGWTEPHGPDFQSDDEGNDGGFLVLVPCY-RAVVEGSSNNNNQ 107

Query: 148 ILSAAGNINDSFSAG 156
           +LSA  N+ +    G
Sbjct: 108 LLSAVKNLPNGLPPG 121

[Close]

BLAST of Cp4.1LG07g01720 vs. TAIR 10
Match: AT4G38060.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-10
Identity = 35/68 (51.47%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 88  SGSES------DDSDWSIGWSEPHGPGFQSDDE-TDNSFAVLVPCYGRVYNDFVDETKNS 147
           SGSES      D  +WS+GW+EPHGP FQSDDE  D  F VLVPCY R   +      N 
Sbjct: 48  SGSESVDVVAGDGPEWSVGWTEPHGPDFQSDDEGNDGGFLVLVPCY-RAVVEGSSNNNNQ 107

Query: 148 ILSAAGNI 149
           +LSA  N+
Sbjct: 108 LLSAVKNL 114

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g01720 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG07g01720 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020253.1	3.85e-125	99.41	hypothetical protein SDJN02_16936, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023001877.1	2.40e-110	100.00	uncharacterized protein LOC111495931 [Cucurbita maxima] >XP_023001878.1 uncharac...	[more]
XP_022951746.1	6.87e-110	99.35	uncharacterized protein LOC111454487 [Cucurbita moschata] >XP_022951747.1 unchar...	[more]
KAG6585342.1	3.97e-109	98.70	hypothetical protein SDJN03_18075, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0065096.1	2.38e-108	88.30	Ribosomal RNA small subunit methyltransferase A [Cucumis melo var. makuwa]	[more]

BLAST of Cp4.1LG07g01720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KME1	1.16e-110	100.00	uncharacterized protein LOC111495931 OS=Cucurbita maxima OX=3661 GN=LOC111495931...	[more]
A0A6J1GID2	3.32e-110	99.35	uncharacterized protein LOC111454487 OS=Cucurbita moschata OX=3662 GN=LOC1114544...	[more]
A0A5A7VFJ3	1.15e-108	88.30	Ribosomal RNA small subunit methyltransferase A OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BB05	9.75e-101	91.61	uncharacterized protein LOC103488121 OS=Cucumis melo OX=3656 GN=LOC103488121 PE=...	[more]
A0A0A0LLD0	1.53e-100	91.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G370490 PE=4 SV=1	[more]

BLAST of Cp4.1LG07g01720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65480.1	6.1e-14	33.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G38060.1	1.1e-10	48.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G38060.2	1.8e-10	51.47	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34464	OS09G0376300 PROTEIN	coord: 1..159
None	No IPR available	PANTHER	PTHR34464:SF5	SUBFAMILY NOT NAMED	coord: 1..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g01720.1	Cp4.1LG07g01720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity