Cp4.1LG07g01090 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g01090
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Mitochondrial transcription termination factor family protein
Location	Cp4.1LG07: 585247 .. 586389 (-)
RNA-Seq Expression	Cp4.1LG07g01090
Synteny	Cp4.1LG07g01090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAATTTTCTGTTCAAAGTTCCTCTGCGTCTCTTTGCTCAAGATCTCCAGAAGTTTGCAGGGAACGACACCACAATTTCCCGCAAATTCCTCTCTTCTCTGTCTGAAATCTCTGAATCAACCAACAATCGGACGGTCGACTACCTTGTTCATACCCTTGGATTCTCCAAGGACTCAGCTCTCGCCGCTGCGAAGCGAATCCATCTCAAAACTACTGCAAATCCCGACTCTGTCATTGCTCTCTTCAAGGCCTATGGATTCACACTGTCCGATACTGCCAGCATCTTTTGCAGAAATCCTAATCTCCTCCTTGCTGATCCGGACACAACACTCAAACCTAAGTTTGAGTTTCTCTCTCGAAATGGTTTCACCGGTCATGTTCTCGTCGACGTGATCTCTAGGGACCCTTCAATTCTTAGAAGGAGTTTGAAGAAGCAGATTGTTCCGTGTATTGATCTTCTCAGAATTTTTTTTGGCTCTACTGATGGTATAGTCTCGCTCTTTTCTGCTAGAGGTGGGACTTGGGTTTTGCGAAACTTTTCAGAATCTGTGGCTCCCAATATCGAACTATTGAGAGCTAATGGCGTGCCCGATTCGAACATCGCGAAAATGATTTGGCTGCGCCCGAGGACACTAGCAAGGGATGCGGAAGAGTTCAGTGACATCGTCGAGAAGACGAAGGAAGCTGGTTTTAATCCTTCGAGCTCGATGTTTATTGATGGGCTGTGTACGTTTTTAGGGATGAAAAAGGACAAATGGTTATCGAAACTGCATATTTTTACAAGTTTTGGGTGGTCAGAGGAGCAGTTTCAATCTCTATTTCGCAAGCAGCCCAAGATTATGAATTCGTCTGAAGAGCAAATAAAGAGGGCCTTGGATTTCTTTATGAACAAATTGGACTGGACGCACGAAGAAATTTGCAAGTACCCAAATGTACTTCATCTTAGTTTTGAAAAAAGGGTGGTTCCGAGGTCGTCTATTCTTCAGCACCTGATATCAAAAGGTTTTATCAAGAAGACAAGTTTTGGCAGGGCATTTTTTATTACCGAGGATAAGTTTTTGGTCAAGTTTGTGATGCAGTATCTTTCTGAGGACCCACATCTACTTGAGATGTACCAGAAGAAGATGGCAGTTTTATAA

mRNA sequence

ATGACCAATTTTCTGTTCAAAGTTCCTCTGCGTCTCTTTGCTCAAGATCTCCAGAAGTTTGCAGGGAACGACACCACAATTTCCCGCAAATTCCTCTCTTCTCTGTCTGAAATCTCTGAATCAACCAACAATCGGACGGTCGACTACCTTGTTCATACCCTTGGATTCTCCAAGGACTCAGCTCTCGCCGCTGCGAAGCGAATCCATCTCAAAACTACTGCAAATCCCGACTCTGTCATTGCTCTCTTCAAGGCCTATGGATTCACACTGTCCGATACTGCCAGCATCTTTTGCAGAAATCCTAATCTCCTCCTTGCTGATCCGGACACAACACTCAAACCTAAGTTTGAGTTTCTCTCTCGAAATGGTTTCACCGGTCATGTTCTCGTCGACGTGATCTCTAGGGACCCTTCAATTCTTAGAAGGAGTTTGAAGAAGCAGATTGTTCCGTGTATTGATCTTCTCAGAATTTTTTTTGGCTCTACTGATGGTATAGTCTCGCTCTTTTCTGCTAGAGGTGGGACTTGGGTTTTGCGAAACTTTTCAGAATCTGTGGCTCCCAATATCGAACTATTGAGAGCTAATGGCGTGCCCGATTCGAACATCGCGAAAATGATTTGGCTGCGCCCGAGGACACTAGCAAGGGATGCGGAAGAGTTCAGTGACATCGTCGAGAAGACGAAGGAAGCTGGTTTTAATCCTTCGAGCTCGATGTTTATTGATGGGCTGTGTACGTTTTTAGGGATGAAAAAGGACAAATGGTTATCGAAACTGCATATTTTTACAAGTTTTGGGTGGTCAGAGGAGCAGTTTCAATCTCTATTTCGCAAGCAGCCCAAGATTATGAATTCGTCTGAAGAGCAAATAAAGAGGGCCTTGGATTTCTTTATGAACAAATTGGACTGGACGCACGAAGAAATTTGCAAGTACCCAAATGTACTTCATCTTAGTTTTGAAAAAAGGGTGGTTCCGAGGTCGTCTATTCTTCAGCACCTGATATCAAAAGGTTTTATCAAGAAGACAAGTTTTGGCAGGGCATTTTTTATTACCGAGGATAAGTTTTTGGTCAAGTTTGTGATGCAGTATCTTTCTGAGGACCCACATCTACTTGAGATGTACCAGAAGAAGATGGCAGTTTTATAA

Coding sequence (CDS)

ATGACCAATTTTCTGTTCAAAGTTCCTCTGCGTCTCTTTGCTCAAGATCTCCAGAAGTTTGCAGGGAACGACACCACAATTTCCCGCAAATTCCTCTCTTCTCTGTCTGAAATCTCTGAATCAACCAACAATCGGACGGTCGACTACCTTGTTCATACCCTTGGATTCTCCAAGGACTCAGCTCTCGCCGCTGCGAAGCGAATCCATCTCAAAACTACTGCAAATCCCGACTCTGTCATTGCTCTCTTCAAGGCCTATGGATTCACACTGTCCGATACTGCCAGCATCTTTTGCAGAAATCCTAATCTCCTCCTTGCTGATCCGGACACAACACTCAAACCTAAGTTTGAGTTTCTCTCTCGAAATGGTTTCACCGGTCATGTTCTCGTCGACGTGATCTCTAGGGACCCTTCAATTCTTAGAAGGAGTTTGAAGAAGCAGATTGTTCCGTGTATTGATCTTCTCAGAATTTTTTTTGGCTCTACTGATGGTATAGTCTCGCTCTTTTCTGCTAGAGGTGGGACTTGGGTTTTGCGAAACTTTTCAGAATCTGTGGCTCCCAATATCGAACTATTGAGAGCTAATGGCGTGCCCGATTCGAACATCGCGAAAATGATTTGGCTGCGCCCGAGGACACTAGCAAGGGATGCGGAAGAGTTCAGTGACATCGTCGAGAAGACGAAGGAAGCTGGTTTTAATCCTTCGAGCTCGATGTTTATTGATGGGCTGTGTACGTTTTTAGGGATGAAAAAGGACAAATGGTTATCGAAACTGCATATTTTTACAAGTTTTGGGTGGTCAGAGGAGCAGTTTCAATCTCTATTTCGCAAGCAGCCCAAGATTATGAATTCGTCTGAAGAGCAAATAAAGAGGGCCTTGGATTTCTTTATGAACAAATTGGACTGGACGCACGAAGAAATTTGCAAGTACCCAAATGTACTTCATCTTAGTTTTGAAAAAAGGGTGGTTCCGAGGTCGTCTATTCTTCAGCACCTGATATCAAAAGGTTTTATCAAGAAGACAAGTTTTGGCAGGGCATTTTTTATTACCGAGGATAAGTTTTTGGTCAAGTTTGTGATGCAGTATCTTTCTGAGGACCCACATCTACTTGAGATGTACCAGAAGAAGATGGCAGTTTTATAA

Protein sequence

MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDSALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLSRNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLRIFFGSTDGIVSLFSARGGTWVLRNFSESVAPNIELLRANGVPDSNIAKMIWLRPRTLARDAEEFSDIVEKTKEAGFNPSSSMFIDGLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQPKIMNSSEEQIKRALDFFMNKLDWTHEEICKYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFFITEDKFLVKFVMQYLSEDPHLLEMYQKKMAVL

Homology

[Close]

BLAST of Cp4.1LG07g01090 vs. NCBI nr
Match: XP_023537744.1 (uncharacterized protein LOC111798676 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 753 bits (1943), Expect = 4.77e-274
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDS 60
           MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDS
Sbjct: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDS 60

Query: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120
           ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS
Sbjct: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120

Query: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLRIFFGSTDGIVSLFSARGGTWVLRN 180
           RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLRIFFGSTDGIVSLFSARGGTWVLRN
Sbjct: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLRIFFGSTDGIVSLFSARGGTWVLRN 180

Query: 181 FSESVAPNIELLRANGVPDSNIAKMIWLRPRTLARDAEEFSDIVEKTKEAGFNPSSSMFI 240
           FSESVAPNIELLRANGVPDSNIAKMIWLRPRTLARDAEEFSDIVEKTKEAGFNPSSSMFI
Sbjct: 181 FSESVAPNIELLRANGVPDSNIAKMIWLRPRTLARDAEEFSDIVEKTKEAGFNPSSSMFI 240

Query: 241 DGLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQPKIMNSSEEQIKRALDFFMNKL 300
           DGLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQPKIMNSSEEQIKRALDFFMNKL
Sbjct: 241 DGLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQPKIMNSSEEQIKRALDFFMNKL 300

Query: 301 DWTHEEICKYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFFITEDKFLVKFVM 360
           DWTHEEICKYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFFITEDKFLVKFVM
Sbjct: 301 DWTHEEICKYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFFITEDKFLVKFVM 360

Query: 361 QYLSEDPHLLEMYQKKMAVL 380
           QYLSEDPHLLEMYQKKMAVL
Sbjct: 361 QYLSEDPHLLEMYQKKMAVL 380

[Close]

BLAST of Cp4.1LG07g01090 vs. NCBI nr
Match: XP_022951071.1 (uncharacterized protein LOC111454030 [Cucurbita moschata])

HSP 1 Score: 718 bits (1854), Expect = 1.75e-260
Identity = 363/380 (95.53%), Postives = 369/380 (97.11%), Query Frame = 0


Query: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDS 60
           MTNFLFK+PLRLFAQDLQKFAGNDTTISRKFLSSLSE+SESTNNRTVDYLVHTLGFSKDS
Sbjct: 1   MTNFLFKLPLRLFAQDLQKFAGNDTTISRKFLSSLSEVSESTNNRTVDYLVHTLGFSKDS 60

Query: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120
           AL AAKRIHLK TANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS
Sbjct: 61  ALVAAKRIHLKPTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120

Query: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLRIFFGSTDGIVSLFSARGGTWVLRN 180
           RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLR FFGST+GIVSLFS R GTWVLRN
Sbjct: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLRNFFGSTNGIVSLFSNRRGTWVLRN 180

Query: 181 FSESVAPNIELLRANGVPDSNIAKMIWLRPRTLARDAEEFSDIVEKTKEAGFNPSSSMFI 240
           FSESVAPNIELLRANGVPDSNIAKMIW+RPRTLARDAEEFSDIVEKTKEAGFNPSS MFI
Sbjct: 181 FSESVAPNIELLRANGVPDSNIAKMIWVRPRTLARDAEEFSDIVEKTKEAGFNPSSPMFI 240

Query: 241 DGLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQPKIMNSSEEQIKRALDFFMNKL 300
           DGLCT LGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQP IMNSSEEQIKRALDFFMNKL
Sbjct: 241 DGLCTLLGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQPTIMNSSEEQIKRALDFFMNKL 300

Query: 301 DWTHEEICKYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFFITEDKFLVKFVM 360
           DWTHEEI KYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTSFGRAF I+EDKFL KFV+
Sbjct: 301 DWTHEEISKYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFMISEDKFLFKFVI 360

Query: 361 QYLSEDPHLLEMYQKKMAVL 380
           QYLSEDPHLLEMYQKKMAVL
Sbjct: 361 QYLSEDPHLLEMYQKKMAVL 380

[Close]

BLAST of Cp4.1LG07g01090 vs. NCBI nr
Match: XP_023537741.1 (uncharacterized protein LOC111798675 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 711 bits (1834), Expect = 1.96e-257
Identity = 359/380 (94.47%), Postives = 367/380 (96.58%), Query Frame = 0


Query: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDS 60
           MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDS
Sbjct: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDS 60

Query: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120
           ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS
Sbjct: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120

Query: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLRIFFGSTDGIVSLFSARGGTWVLRN 180
           RNGFTGHVLVDVISRDPSILRRSLKKQIVPCID LR FFGSTDG++SLFSAR GTWVLRN
Sbjct: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGVISLFSARRGTWVLRN 180

Query: 181 FSESVAPNIELLRANGVPDSNIAKMIWLRPRTLARDAEEFSDIVEKTKEAGFNPSSSMFI 240
           FSESVAPNIELLRANGVPDSNIAK+ W+RPRTLARDAEEFSDIVEKTKEAGFNPSS MF 
Sbjct: 181 FSESVAPNIELLRANGVPDSNIAKIFWVRPRTLARDAEEFSDIVEKTKEAGFNPSSPMFT 240

Query: 241 DGLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQPKIMNSSEEQIKRALDFFMNKL 300
            GLCTFLGMKKDKWLSKL IFTSFGWSEEQFQSLF KQP IMNSSEEQIK+ALDF MNKL
Sbjct: 241 YGLCTFLGMKKDKWLSKLQIFTSFGWSEEQFQSLFLKQPTIMNSSEEQIKKALDFLMNKL 300

Query: 301 DWTHEEICKYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFFITEDKFLVKFVM 360
           DWTHEEICKYPNVL+LSFEKRVVPRSSILQHLISKGFIKKT+FGRAF I+EDKFLVKFVM
Sbjct: 301 DWTHEEICKYPNVLYLSFEKRVVPRSSILQHLISKGFIKKTNFGRAFMISEDKFLVKFVM 360

Query: 361 QYLSEDPHLLEMYQKKMAVL 380
           QYLSE PHLLEMYQKKMAVL
Sbjct: 361 QYLSEYPHLLEMYQKKMAVL 380

[Close]

BLAST of Cp4.1LG07g01090 vs. NCBI nr
Match: XP_023537740.1 (uncharacterized protein LOC111798675 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023537742.1 uncharacterized protein LOC111798675 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 706 bits (1822), Expect = 1.32e-255
Identity = 355/380 (93.42%), Postives = 366/380 (96.32%), Query Frame = 0


Query: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDS 60
           MTNFL+KVPLRLFAQDLQKFAGNDTTI+RKFLSSLSEISESTNNRT+DYLVHTLGFSKDS
Sbjct: 1   MTNFLYKVPLRLFAQDLQKFAGNDTTIARKFLSSLSEISESTNNRTIDYLVHTLGFSKDS 60

Query: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120
           ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS
Sbjct: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120

Query: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLRIFFGSTDGIVSLFSARGGTWVLRN 180
           RNGFTGH LVDVISRDPSILRRSLKKQIVPCID LR FFGSTDG++SLFSAR GTWVLRN
Sbjct: 121 RNGFTGHFLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGVISLFSARRGTWVLRN 180

Query: 181 FSESVAPNIELLRANGVPDSNIAKMIWLRPRTLARDAEEFSDIVEKTKEAGFNPSSSMFI 240
           FSESVAPNIELLRANGVPDSNIAK+ W+RPRTLARDAEEFSDIVEKTKEAGFNPSS MF 
Sbjct: 181 FSESVAPNIELLRANGVPDSNIAKIFWVRPRTLARDAEEFSDIVEKTKEAGFNPSSPMFT 240

Query: 241 DGLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQPKIMNSSEEQIKRALDFFMNKL 300
            GLCTFLGMKKDKWLSKL IFTSFGWSEEQFQSLF KQP IMNSSEEQIK+ALDF MNKL
Sbjct: 241 YGLCTFLGMKKDKWLSKLQIFTSFGWSEEQFQSLFLKQPTIMNSSEEQIKKALDFLMNKL 300

Query: 301 DWTHEEICKYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFFITEDKFLVKFVM 360
           DWTHEEICKYPNVL+LSFEKRVVPRSSILQHLISKGFIKKT+FGRAF I+EDKFLVKFVM
Sbjct: 301 DWTHEEICKYPNVLYLSFEKRVVPRSSILQHLISKGFIKKTNFGRAFMISEDKFLVKFVM 360

Query: 361 QYLSEDPHLLEMYQKKMAVL 380
           QYLSE PHLLEMYQKKMAVL
Sbjct: 361 QYLSEYPHLLEMYQKKMAVL 380

[Close]

BLAST of Cp4.1LG07g01090 vs. NCBI nr
Match: KAG6585270.1 (hypothetical protein SDJN03_18003, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 704 bits (1818), Expect = 5.37e-255
Identity = 356/380 (93.68%), Postives = 366/380 (96.32%), Query Frame = 0


Query: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDS 60
           MTNFLFKVP RLFAQDLQKFAGNDTTISRKF SSLSEIS+STNNRTVDYLVHTLGFSKDS
Sbjct: 1   MTNFLFKVPPRLFAQDLQKFAGNDTTISRKFPSSLSEISQSTNNRTVDYLVHTLGFSKDS 60

Query: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120
           ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS
Sbjct: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120

Query: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLRIFFGSTDGIVSLFSARGGTWVLRN 180
           RNGFTGHVLVDVISRDPSILRRSLKKQIVPCID+LR FFGSTDG+VSLFSAR GTWVLRN
Sbjct: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDILRNFFGSTDGVVSLFSARRGTWVLRN 180

Query: 181 FSESVAPNIELLRANGVPDSNIAKMIWLRPRTLARDAEEFSDIVEKTKEAGFNPSSSMFI 240
           FSESVAPNIELLRANGVPDSNIAK+ W+RPRTLARDAEEFSDIVEKTKEAGFNPSS MF 
Sbjct: 181 FSESVAPNIELLRANGVPDSNIAKIFWVRPRTLARDAEEFSDIVEKTKEAGFNPSSPMFT 240

Query: 241 DGLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQPKIMNSSEEQIKRALDFFMNKL 300
            GLCTFLGMKKDKWLSK HIFTSFGWSEEQFQSLF KQP IMNSSEEQIKRALDF MNKL
Sbjct: 241 YGLCTFLGMKKDKWLSKQHIFTSFGWSEEQFQSLFLKQPTIMNSSEEQIKRALDFLMNKL 300

Query: 301 DWTHEEICKYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFFITEDKFLVKFVM 360
           DWTHEEI KYPNVL+LSFEKRVVPRSSILQHLISKGFIKKT+FGRAF ++EDKFLVKFVM
Sbjct: 301 DWTHEEISKYPNVLYLSFEKRVVPRSSILQHLISKGFIKKTNFGRAFMLSEDKFLVKFVM 360

Query: 361 QYLSEDPHLLEMYQKKMAVL 380
           QYLSEDPHLLEMYQK+MAVL
Sbjct: 361 QYLSEDPHLLEMYQKEMAVL 380

[Close]

BLAST of Cp4.1LG07g01090 vs. ExPASy TrEMBL
Match: A0A6J1GGI9 (uncharacterized protein LOC111454030 OS=Cucurbita moschata OX=3662 GN=LOC111454030 PE=3 SV=1)

HSP 1 Score: 718 bits (1854), Expect = 8.48e-261
Identity = 363/380 (95.53%), Postives = 369/380 (97.11%), Query Frame = 0


Query: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDS 60
           MTNFLFK+PLRLFAQDLQKFAGNDTTISRKFLSSLSE+SESTNNRTVDYLVHTLGFSKDS
Sbjct: 1   MTNFLFKLPLRLFAQDLQKFAGNDTTISRKFLSSLSEVSESTNNRTVDYLVHTLGFSKDS 60

Query: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120
           AL AAKRIHLK TANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS
Sbjct: 61  ALVAAKRIHLKPTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120

Query: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLRIFFGSTDGIVSLFSARGGTWVLRN 180
           RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLR FFGST+GIVSLFS R GTWVLRN
Sbjct: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLRNFFGSTNGIVSLFSNRRGTWVLRN 180

Query: 181 FSESVAPNIELLRANGVPDSNIAKMIWLRPRTLARDAEEFSDIVEKTKEAGFNPSSSMFI 240
           FSESVAPNIELLRANGVPDSNIAKMIW+RPRTLARDAEEFSDIVEKTKEAGFNPSS MFI
Sbjct: 181 FSESVAPNIELLRANGVPDSNIAKMIWVRPRTLARDAEEFSDIVEKTKEAGFNPSSPMFI 240

Query: 241 DGLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQPKIMNSSEEQIKRALDFFMNKL 300
           DGLCT LGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQP IMNSSEEQIKRALDFFMNKL
Sbjct: 241 DGLCTLLGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQPTIMNSSEEQIKRALDFFMNKL 300

Query: 301 DWTHEEICKYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFFITEDKFLVKFVM 360
           DWTHEEI KYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTSFGRAF I+EDKFL KFV+
Sbjct: 301 DWTHEEISKYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFMISEDKFLFKFVI 360

Query: 361 QYLSEDPHLLEMYQKKMAVL 380
           QYLSEDPHLLEMYQKKMAVL
Sbjct: 361 QYLSEDPHLLEMYQKKMAVL 380

[Close]

BLAST of Cp4.1LG07g01090 vs. ExPASy TrEMBL
Match: A0A6J1GGM9 (uncharacterized protein LOC111454031 OS=Cucurbita moschata OX=3662 GN=LOC111454031 PE=3 SV=1)

HSP 1 Score: 701 bits (1810), Expect = 4.30e-254
Identity = 353/380 (92.89%), Postives = 366/380 (96.32%), Query Frame = 0


Query: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDS 60
           MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEIS+STNNRTVDYLVHTLGFSKDS
Sbjct: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISQSTNNRTVDYLVHTLGFSKDS 60

Query: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120
           ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCR+PNLLLADPDT LKPKFEFLS
Sbjct: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRHPNLLLADPDTILKPKFEFLS 120

Query: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLRIFFGSTDGIVSLFSARGGTWVLRN 180
           RNGFTGHVLVDVISRDPSILRRSLKKQIVPCID LR FFGSTDG+VSLFSAR GTWVLR 
Sbjct: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGVVSLFSARRGTWVLRK 180

Query: 181 FSESVAPNIELLRANGVPDSNIAKMIWLRPRTLARDAEEFSDIVEKTKEAGFNPSSSMFI 240
           F+ESVAPNIELLRANGVPDSNIAK+ W+RPRTLAR+AEEFSDIVEKTKEAGFNPSS MF 
Sbjct: 181 FTESVAPNIELLRANGVPDSNIAKIFWMRPRTLARNAEEFSDIVEKTKEAGFNPSSPMFT 240

Query: 241 DGLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQPKIMNSSEEQIKRALDFFMNKL 300
            GLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLF KQP IMNSSEEQIK+ALDF MNKL
Sbjct: 241 YGLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLFLKQPTIMNSSEEQIKKALDFLMNKL 300

Query: 301 DWTHEEICKYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFFITEDKFLVKFVM 360
           DWTHEEI KYPNVL+LSFEKRVVPRSSILQHL+SKGFIKKT+FGRAF ++EDKFLVKFVM
Sbjct: 301 DWTHEEISKYPNVLYLSFEKRVVPRSSILQHLMSKGFIKKTNFGRAFMLSEDKFLVKFVM 360

Query: 361 QYLSEDPHLLEMYQKKMAVL 380
           QYLSEDPHLLEMYQKKMAVL
Sbjct: 361 QYLSEDPHLLEMYQKKMAVL 380

[Close]

BLAST of Cp4.1LG07g01090 vs. ExPASy TrEMBL
Match: A0A6J1GHP2 (uncharacterized protein LOC111454032 OS=Cucurbita moschata OX=3662 GN=LOC111454032 PE=3 SV=1)

HSP 1 Score: 695 bits (1793), Expect = 1.68e-251
Identity = 352/380 (92.63%), Postives = 363/380 (95.53%), Query Frame = 0


Query: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDS 60
           MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEIS+STNNRTVDYLVHTLGFSKDS
Sbjct: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISQSTNNRTVDYLVHTLGFSKDS 60

Query: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120
           ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDT LKPKFEFLS
Sbjct: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTILKPKFEFLS 120

Query: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLRIFFGSTDGIVSLFSARGGTWVLRN 180
           RNGFTGHVLV+VISRDP ILRRSLKKQIVPCID LRIFFGSTD IVSLFSAR GTWVLR 
Sbjct: 121 RNGFTGHVLVNVISRDPEILRRSLKKQIVPCIDFLRIFFGSTDVIVSLFSARRGTWVLRK 180

Query: 181 FSESVAPNIELLRANGVPDSNIAKMIWLRPRTLARDAEEFSDIVEKTKEAGFNPSSSMFI 240
           FSESVAPNIELLRANGVPDS IAK+ W+RPRTLARDAEEFSDIVEKTKEAGFNPSS MFI
Sbjct: 181 FSESVAPNIELLRANGVPDSKIAKIFWVRPRTLARDAEEFSDIVEKTKEAGFNPSSPMFI 240

Query: 241 DGLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQPKIMNSSEEQIKRALDFFMNKL 300
            GLCTF GMKKDKWLSKLHIFTSFGWS+EQFQSLF KQP  MNSSEE+IKRALDFFMNKL
Sbjct: 241 YGLCTFSGMKKDKWLSKLHIFTSFGWSKEQFQSLFLKQPTFMNSSEEKIKRALDFFMNKL 300

Query: 301 DWTHEEICKYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFFITEDKFLVKFVM 360
           DWTHEEI +YP VL+LSFEKRVVPRSSILQHL+SKGFIKKTSFGRAF ++EDKFLVKFVM
Sbjct: 301 DWTHEEISRYPIVLYLSFEKRVVPRSSILQHLMSKGFIKKTSFGRAFMLSEDKFLVKFVM 360

Query: 361 QYLSEDPHLLEMYQKKMAVL 380
           QYLSEDPHLLEMYQKKMAVL
Sbjct: 361 QYLSEDPHLLEMYQKKMAVL 380

[Close]

BLAST of Cp4.1LG07g01090 vs. ExPASy TrEMBL
Match: A0A6J1KSF9 (uncharacterized protein LOC111496045 OS=Cucurbita maxima OX=3661 GN=LOC111496045 PE=3 SV=1)

HSP 1 Score: 693 bits (1789), Expect = 6.82e-251
Identity = 351/380 (92.37%), Postives = 364/380 (95.79%), Query Frame = 0


Query: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDS 60
           MTNFLFKVPLRLFAQ+LQKFAGND TISRKFLSSLS+ISESTNNRTVDYLVHTLGFSKDS
Sbjct: 1   MTNFLFKVPLRLFAQELQKFAGNDPTISRKFLSSLSKISESTNNRTVDYLVHTLGFSKDS 60

Query: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120
           ALAAAKRIHLK+TANPDSVIALFKAYGFTLSDTASIFCR+PNLLLADPDT LKPK EFLS
Sbjct: 61  ALAAAKRIHLKSTANPDSVIALFKAYGFTLSDTASIFCRHPNLLLADPDTILKPKIEFLS 120

Query: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLRIFFGSTDGIVSLFSARGGTWVLRN 180
           RNGFTGHVLVDVISRDPSILRRSLKKQIVPCID LR FFGSTDGIVSLFSAR GTWVLR 
Sbjct: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDFLRNFFGSTDGIVSLFSARRGTWVLRK 180

Query: 181 FSESVAPNIELLRANGVPDSNIAKMIWLRPRTLARDAEEFSDIVEKTKEAGFNPSSSMFI 240
           FSESVAPNIELLRANGVPDSNIAK+ W+RPRTLARDAEEFSDIVEKTKEAGFNPSS MF 
Sbjct: 181 FSESVAPNIELLRANGVPDSNIAKIFWVRPRTLARDAEEFSDIVEKTKEAGFNPSSPMFT 240

Query: 241 DGLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQPKIMNSSEEQIKRALDFFMNKL 300
            GLCT+LGMKKDKWLSKLHIFTSFGWSEEQFQSLF KQP IMNSSEE+IKRAL+FFMNKL
Sbjct: 241 YGLCTYLGMKKDKWLSKLHIFTSFGWSEEQFQSLFLKQPTIMNSSEEKIKRALNFFMNKL 300

Query: 301 DWTHEEICKYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFFITEDKFLVKFVM 360
           DWTHEEI KYPN+L+LS EKRVVPRSSILQHLISKGFIKKTSFGRAF ++EDKFLVKFVM
Sbjct: 301 DWTHEEISKYPNLLYLSVEKRVVPRSSILQHLISKGFIKKTSFGRAFLMSEDKFLVKFVM 360

Query: 361 QYLSEDPHLLEMYQKKMAVL 380
           QYLSEDPHLLEMYQKKMAVL
Sbjct: 361 QYLSEDPHLLEMYQKKMAVL 380

[Close]

BLAST of Cp4.1LG07g01090 vs. ExPASy TrEMBL
Match: A0A6J1KMV5 (uncharacterized protein LOC111496044 OS=Cucurbita maxima OX=3661 GN=LOC111496044 PE=3 SV=1)

HSP 1 Score: 681 bits (1758), Expect = 3.61e-246
Identity = 349/380 (91.84%), Postives = 356/380 (93.68%), Query Frame = 0


Query: 1   MTNFLFKVPLRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDS 60
           MTNFLFKVPLR FAQ+LQKFAGND TISR FLSSLS+ISESTNNRTVDYLVHTLGFSKDS
Sbjct: 1   MTNFLFKVPLRFFAQELQKFAGNDPTISRNFLSSLSKISESTNNRTVDYLVHTLGFSKDS 60

Query: 61  ALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLS 120
           ALAAAKRIHLK+TANPDSVIALFKAYGFTLSDTASIFCR+P+LLLADPDT LKPK EFLS
Sbjct: 61  ALAAAKRIHLKSTANPDSVIALFKAYGFTLSDTASIFCRHPHLLLADPDTILKPKIEFLS 120

Query: 121 RNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLRIFFGSTDGIVSLFSARGGTWVLRN 180
           RNGFTGHVLVDVISRDPSILRRSLK  IVPCID LR FFGSTDGIVSLFSAR GTWVL N
Sbjct: 121 RNGFTGHVLVDVISRDPSILRRSLKNLIVPCIDFLRNFFGSTDGIVSLFSARRGTWVLHN 180

Query: 181 FSESVAPNIELLRANGVPDSNIAKMIWLRPRTLARDAEEFSDIVEKTKEAGFNPSSSMFI 240
           FSESVAPNIELLRANGV DSNIAKMIW RPRTLARDAEEFSDIVEKTKEAGFNPSS MF 
Sbjct: 181 FSESVAPNIELLRANGVLDSNIAKMIWARPRTLARDAEEFSDIVEKTKEAGFNPSSPMFT 240

Query: 241 DGLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQPKIMNSSEEQIKRALDFFMNKL 300
            GLCTF  MKKDKWLSKLHIFTSFGWSEEQFQSLF KQP  M SSEEQIKRALDFFMNKL
Sbjct: 241 YGLCTFSVMKKDKWLSKLHIFTSFGWSEEQFQSLFLKQPTFMYSSEEQIKRALDFFMNKL 300

Query: 301 DWTHEEICKYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFFITEDKFLVKFVM 360
           DWTHEEI KYPNVL+LSFEKRVVPRSSILQHLISKGFIKKTSFGRAF I+EDKFLVKFVM
Sbjct: 301 DWTHEEISKYPNVLYLSFEKRVVPRSSILQHLISKGFIKKTSFGRAFLISEDKFLVKFVM 360

Query: 361 QYLSEDPHLLEMYQKKMAVL 380
           QYLSEDPHLLEMYQKKMAVL
Sbjct: 361 QYLSEDPHLLEMYQKKMAVL 380

[Close]

BLAST of Cp4.1LG07g01090 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 194.9 bits (494), Expect = 1.2e-49
Identity = 114/368 (30.98%), Postives = 198/368 (53.80%), Query Frame = 0


Query: 9   PLRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDSALAAAKRI 68
           P+ +F+   Q F+   TT++ K  +   +  +   + T++YL+ + G S DSA  A++++
Sbjct: 37  PIFVFSLQTQ-FSSPVTTLTSK--NPKDDEQQQKLSFTLNYLIDSCGLSPDSATVASRKL 96

Query: 69  HLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLSRNGFTGHV 128
            L +   P++V+ L + +GFT +  +S+  + P LLLA+ ++ L PK  F    G +  +
Sbjct: 97  LLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSIGVSKSL 156

Query: 129 LVDVISRDPSILRRSLKKQIVPCIDLLRIFFGSTDGIVSLFSARGGTWV-LRNFSESVAP 188
           L   ++ DP+IL RSL  Q++P  + L+    S + IV+  + R  TWV L + ++++ P
Sbjct: 157 LARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVA--ALRRTTWVFLEDHTKNLVP 216

Query: 189 NIELLRANGVPDSNIAKMIWLRPRTLARDAEEFSDIVEKTKEAGFNPSSSMFIDGLCTFL 248
           NI  +   GVP+  I  ++   P  + +   EF  I ++ +E GFNP  S F+  +    
Sbjct: 217 NINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALS 276

Query: 249 GM-KKDKWLSKLHIFTSFGWSEEQFQSLFRKQPKIMNSSEEQIKRALDFFMNKLDWTHEE 308
           G   K  W     ++  +GWSE+     F+K P  M  SE +I R +++F+N+++     
Sbjct: 277 GKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRS 336

Query: 309 ICKYPNVLHLSFEKRVVPRSSILQHLISKGFIKKT-SFGRAFFITEDKFLVKFVMQYLSE 368
           I + P VL  S EKR++PR S+ + L+S G +K+  S        E  FL K V++Y  E
Sbjct: 337 IAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEE 396

Query: 369 DPHLLEMY 374
            P L+ +Y
Sbjct: 397 LPELMNLY 399

[Close]

BLAST of Cp4.1LG07g01090 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 177.2 bits (448), Expect = 2.5e-44
Identity = 99/330 (30.00%), Postives = 167/330 (50.61%), Query Frame = 0


Query: 46  TVDYLVHTLGFSKDSALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLL 105
           TV YLV + G S +SA + ++ + L ++  PDSV+ALFK +GFT     S+    P +L 
Sbjct: 58  TVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLS 117

Query: 106 ADPDTTLKPKFEFLSRNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLRIFFGSTDGI 165
             P+  + PK  F S  GF+      +IS  P +L  SL K+++PC D L+      + +
Sbjct: 118 LSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESV 177

Query: 166 VSLFSARGGTWVLRNFSESVAPNIELLRANGVPDSNIAKMIWLRPRTLARDAEEFSDIVE 225
           V     RG        +  V+  + + R  GVPD +I  ++   P T       F++++ 
Sbjct: 178 VKCLK-RGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLN 237

Query: 226 KTKEAGFNPSSSMFIDGLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQPKIMNSS 285
           +    GF+P  + F+  +  F    +     K  +F  FGWS+E F +   + P  +  S
Sbjct: 238 RVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVS 297

Query: 286 EEQIKRALDFFMNKLDWTHEEICKYPNVLHLSFEKRVVPRSSILQHLISKGFIKK--TSF 345
           +E+I   L++ +N +     +I   P VL LS EKR+ PR+ ++  L+SKG +KK   ++
Sbjct: 298 DEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINY 357

Query: 346 GRAFFITEDKFLVKFVMQYLSEDPHLLEMY 374
                +   +F+ KFV++Y  E P L++ +
Sbjct: 358 FTILKLKSSEFMDKFVLKYQDEMPQLVQPF 386

[Close]

BLAST of Cp4.1LG07g01090 vs. TAIR 10
Match: AT1G61980.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 147.5 bits (371), Expect = 2.2e-35
Identity = 110/397 (27.71%), Postives = 184/397 (46.35%), Query Frame = 0


Query: 10  LRLFAQDLQKFAGNDTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDSALAAAKRIH 69
           LR+  Q     + + ++ S   LS    +     + TV YLV +LG  K  A + ++++ 
Sbjct: 20  LRVLVQKASPLSNSFSSASAARLS--PRVGRKGKSFTVSYLVDSLGLPKKLAESVSRKVS 79

Query: 70  LKTTANPDSVIALFKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLSRNGFTGHVL 129
            +   NPDSV+ L +++GFT S  ++I    P LL+AD + +L PK +FL   G +   L
Sbjct: 80  FEDKDNPDSVLNLLRSHGFTDSQISTIVTDYPQLLVADAEKSLAPKLQFLQSRGASSSEL 139

Query: 130 VDVISRDPSILRRSLKKQIVPCIDLLRIFFGSTDGIVSLFSARGGTWVLRNFSESVAPNI 189
            +++S  P IL +   K I    D    F   T    S  S +      +   E+   N+
Sbjct: 140 TEIVSTVPKILGKRGHKTISVFYD----FIKETLLDKSSKSEKSCQPFPQGNLENKIRNL 199

Query: 190 ELLRANGVPDSNIAKMIWLRPRTLARDAEEFSDIVEKTKEAGFNPSSSMFIDGLC----- 249
            +LR  G+P   +  ++ +         E+F + ++K  E GF+PS+S F++ LC     
Sbjct: 200 SVLRELGMPHKLLFPLL-ISCDVPVFGKEKFEESLKKVVEMGFDPSTSKFVEALCVVQRL 259

Query: 250 ------------------------------TFLGMKKDKWLSKLHIFTSFGWSEEQFQSL 309
                                          FL   + K L+ +  F   G+S ++F  L
Sbjct: 260 SDKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFLTHSEKKILNTIETFLGLGFSRDEFSVL 319

Query: 310 FRKQPKIMNSSEEQIKRALDFFMNKLDWTHEEICKYPNVLHLSFEKRVVPRSSILQHLIS 369
            ++ P+ +  S E +K+  +F + K++W  + +   P VL  S EKR VPR +++Q LIS
Sbjct: 320 IKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKALVSNPAVLGYSLEKRTVPRGNVVQALIS 379

[Close]

BLAST of Cp4.1LG07g01090 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 147.1 bits (370), Expect = 2.8e-35
Identity = 95/350 (27.14%), Postives = 178/350 (50.86%), Query Frame = 0


Query: 24  DTTISRKFLSSLSEISESTNNRTVDYLVHTLGFSKDSALAAAKRI-HLKTTANPDSVIAL 83
           D  +S    SS +  +  +N   V++L    GF K  A+A A R  +LK+   P SVI +
Sbjct: 19  DRALSLHHFSSNATPASISNPAFVEFL-RDNGFQKPLAIAIAMRYPNLKSLEQPRSVIQM 78

Query: 84  FKAYGFTLSDTASIFCRNPNLLLADPDTTLKPKFEFLSRNGFTGHVLVDVISRDPSILRR 143
            K+Y F+ +        +P ++  + +  L+PK  F    GFTG  L   +S++ S++  
Sbjct: 79  LKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGV 138

Query: 144 SLKKQIVPCIDLLRIFFGSTDGIVSLFSARGGTWVL--RNFSESVAPNIELLRANGVPDS 203
           SL K+++P +++L+         + +  +R G W+L  R+ +  + PNI  L   G+  S
Sbjct: 139 SLVKKLIPTVEILKSIVAPKHEDLPVILSRCG-WLLLSRDPNLFLLPNISYLETCGIVGS 198

Query: 204 NIAKMIWLRPRTLARDAEEFSDIVEKTKEAGFNPSSSMFIDGLCTFLGMKKDKWLSKLHI 263
            +A ++  +PR      E+    V +  + GF  +S M +  + +   + +  +  K+ +
Sbjct: 199 QLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKL 258

Query: 264 FTSFGWSEEQFQSLFRKQPKIMNSSEEQIKRALDFFMNKLDWTHEEICKYPNVLHLSFEK 323
           F + G+SE++   + R+ P ++  SE+++    +F++ ++    E + K P VL  + EK
Sbjct: 259 FMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEK 318

Query: 324 RVVPRSSILQHLISKGFI-----KKTSFGRAFFITEDKFLVKFVMQYLSE 366
           RV+PR  +LQ L  KG +     KK +      +TE+ FL K+V+++  E
Sbjct: 319 RVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDE 366

[Close]

BLAST of Cp4.1LG07g01090 vs. TAIR 10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-32
Identity = 100/372 (26.88%), Postives = 171/372 (45.97%), Query Frame = 0


Query: 44  NRTVDYLVHTLGFSKDSALAAAKRIHLKTTANPDSVIALFKAYGFTLSDTASIFCRNPNL 103
           N TV YLV +LG SK  A + ++++  +   NPDSV++LF++YGFT S  ++I    P L
Sbjct: 52  NFTVSYLVDSLGLSKKLAESISRKVSFEDKVNPDSVLSLFRSYGFTDSQISTIITDYPLL 111

Query: 104 LLADPDTTLKPKFEFLSRNGFTGHVLVDVISRDPSILRRSLKKQIVPCIDLLR-IFFGST 163
           L+AD    L  K + L   G +   + +++S  P IL    KK I    D ++ I    T
Sbjct: 112 LVADAKKALGRKLQILQSRGASSSEITEIVSTVPRILG---KKSITVYYDAVKDIIVADT 171

Query: 164 DGIVSLFSARGGTWVLRNFSESVAPNIELLRANGVPDSNIAKMIWLRPRTLARDAEEFSD 223
                L     G  +          N+  LR  G+P   +  ++  + + +    E F  
Sbjct: 172 SSSYELPQGSQGNKI---------RNVSALRELGMPSRLLLPLLVSKSQPVC-GKENFDA 231

Query: 224 IVEKTKEAGFNPSSSMFIDGLCTFLGMKKDKWLSKLHIFTSFGWSEEQFQSLFRKQP--- 283
            ++K  E GF+P+++ F+  L     M +     K+ +F S G++ +    +F+K P   
Sbjct: 232 SLKKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVL 291

Query: 284 -----KIMNSSE---------------------------EQIKRALDFFMNKLDWTHEEI 343
                KI+ S+E                           E +K+  +F + K+ W    +
Sbjct: 292 KVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNAL 351

Query: 344 CKYPNVLHLSFEKRVVPRSSILQHLISKGFIKKTS----FGRAFFITEDKFLVKFVMQYL 376
             +P V   S EKR++PR +IL+ L+SKG ++K S           T++ FL ++VM++ 
Sbjct: 352 VLHPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFLDRYVMKHN 410

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g01090 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG07g01090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537744.1	4.77e-274	100.00	uncharacterized protein LOC111798676 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022951071.1	1.75e-260	95.53	uncharacterized protein LOC111454030 [Cucurbita moschata]	[more]
XP_023537741.1	1.96e-257	94.47	uncharacterized protein LOC111798675 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023537740.1	1.32e-255	93.42	uncharacterized protein LOC111798675 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
KAG6585270.1	5.37e-255	93.68	hypothetical protein SDJN03_18003, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG07g01090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGI9	8.48e-261	95.53	uncharacterized protein LOC111454030 OS=Cucurbita moschata OX=3662 GN=LOC1114540...	[more]
A0A6J1GGM9	4.30e-254	92.89	uncharacterized protein LOC111454031 OS=Cucurbita moschata OX=3662 GN=LOC1114540...	[more]
A0A6J1GHP2	1.68e-251	92.63	uncharacterized protein LOC111454032 OS=Cucurbita moschata OX=3662 GN=LOC1114540...	[more]
A0A6J1KSF9	6.82e-251	92.37	uncharacterized protein LOC111496045 OS=Cucurbita maxima OX=3661 GN=LOC111496045...	[more]
A0A6J1KMV5	3.61e-246	91.84	uncharacterized protein LOC111496044 OS=Cucurbita maxima OX=3661 GN=LOC111496044...	[more]

BLAST of Cp4.1LG07g01090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	1.2e-49	30.98	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	2.5e-44	30.00	Mitochondrial transcription termination factor family protein	[more]
AT1G61980.1	2.2e-35	27.71	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	2.8e-35	27.14	Mitochondrial transcription termination factor family protein	[more]
AT1G61990.1	1.3e-32	26.88	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 304..338 e-value: 39.0 score: 13.1 coord: 237..267 e-value: 1000.0 score: 3.7 coord: 203..233 e-value: 2800.0 score: 0.4 coord: 130..162 e-value: 3.5 score: 16.6 coord: 29..57 e-value: 1700.0 score: 2.1 coord: 272..303 e-value: 0.71 score: 18.9 coord: 94..125 e-value: 7.8E-4 score: 28.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 184..355 e-value: 5.8E-23 score: 81.3 coord: 81..233 e-value: 1.6E-13 score: 50.2 coord: 81..156 e-value: 8.2E-10 score: 38.1
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 8..377
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 161..366 e-value: 1.7E-38 score: 134.3
None	No IPR available	PANTHER	PTHR13068:SF187	SUBFAMILY NOT NAMED	coord: 8..377

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g01090.1	Cp4.1LG07g01090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0032502	developmental process
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003690	double-stranded DNA binding