Cp4.1LG07g00850 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACGCTTAACCATGATTGAGCAATTGAAAAGAAACGTGCACTTTGTTGGCATAGATAGTAACTTTTATTTCCTTTAAACTTTTCTTAGTCATCCCATCACCAGAATCTGTCTCGGTTCATTCATACCTCTCCTTTACTCGGATGTTATACTTATACAGTATGAAAGATCCAAACCCAGAATCCACACAACTTATTTCTTATACATTCATAAAAATTAGTTTAAACCACTGGCTTTTATGTACAACAAAGTAAAATACATGACAAATCGTGGAACGTTCGAGATAAAGTTCCATACTTTTCTTCCTTTTTCTCATAAAGCTGTCTTTCTAGAATCTCATCTCTTCGAGTAGTCTACGAAACTTTCGTAGCTACTGCTTTACTAACTTTAATACTCGTCGATTTTCATTATATTAGTTCCGTAGCTAGTTTTTTAAGACGAACGCTTATAGGTGTTATGTGTGGGTTTATAATCCCTAGGGAATATAGAATTCCACGTTCCATTCATCACTACAACCACCTTTACAAGACTGATACCCAAAATAAAGTGAAGTGATATCAAAGCAACCACAAATTTCAAACCTTCCTCTCATTCTTTGCCCATTTTGATCATTTTGGCTTCATTTTACCTTAAGATTGGTATCATTCACTAATGGATGATCCAAAAGGATATCTGTTCTTAATCATCTCTGATAGCAAAACCCAGCTTTACAACACTCATGTTCTTGATTTCAATCATTTTAACAACTAAATGGACCAATTTCATAGCTTTTAGCTATCAAAATTGAAGTTTTTCAATCTCTAAACCACAAATTTTGATACCCATTTACCAAAATTCTAAGTTTTCAACTCCAAATTATGCTGATTATCATACCCATAATCCAAATTAGCTCTTGTTTAGCTAATAATGTTTTACTTTTGGATGCAAAGAATCTAAATATCTCATAGAACAAAAGGGAAATGGAAGGAAAAAGAAAGAAAAAGAAGGGAAAAAAAAAGGTGAATAGTGACACACAGGCACCGCCTCCACATTCTTTCCCCACTAGAAATCTCTATTTCCCTTCCCTCTCTCTCTCTCTCTCTGCTTCGCCACAGCTCTCTGTTCTGTTCTCTCTCGGAGTTCGTGTTCATCCATGGCGGTTCTCTTGTTCTTTTCCTTGATGTTCATGGCCTTCACCTCTCATTCAGGTAACCCTTTTGTTCCTTCAAGCTTTTCTGCAACTTCAATGGAATTTTACACAAGAATCGCTTAAACCCTTTGAAGATTTTCATCTGAAATCGAAAAATTCCACTAACCCTTGGTTTAAATCTTCTTTAGATGCTATATATTGTGTTTGTAAAGATGGATTAAGCGACCAAGCCCTTCAAAAATCACTGGATTATGCTTGTGGAGCTGGAGCCGATTGTTCTCCAATCCTTCAAAATGGGGTTTGTTTTCAGCCTAATACTGTCAAAGATCATTGTAGCTATGCTGTTAATAGCTACTTTCAGCGCAAGGGTCAAGTCCAAGGGAGCTGTGATTTTTCAGGCACTGCCATGGCTAGCCAGTCTCCTCCTGGTATCACTGATTCATATCATTTTTCACTCATGTTCTTCATCAATGGCCTTGTTTTTGTTGCTTAATCTTTGTTGGGTTTGTTTTCCATGTGTTTTTTCAACAGCTGGAGCTTCTGGGTGTGTTTATCCTTCAAGTCCCAGGTACCATCTTCATGTTCTTCATAGTTTTTCAAGAATTGTTCATATCTCTAATGGAAAGTGGCTGATACTCATGCATTTTCATTTGTTTCTTTACTCAAAGTTACCTTTTCCTCAACTTTTTGAACTGATTTTAGTGAGAATCTGCTGCTTGATAGCATAAAAGAAGGCGTTCATTTAAGAATCCAATTCCCTTCTGGCTTTGTTCATAGCTGTTCATCTTTTTCACCTTAGAAACTTTCCTAATCCTGTTTAGATGAAAGTTATCCTTCACTTTTACTGTCTCTTTCTATGCTATCTATGTGCTGTTCTTCTCTGTTTTTACATCCAATGACAAAATTTACCATTTCAAAGCTTCCATGAGTGACAATGACATGAACAAATCAACAATTCAACAATTCAACACCCCTTTTCCTCTTCTCTGTTTCAGCAACGCAGGAACCCCGTCGACCACCGTCCCGGGCACGACGCCAGGAACAATCACGAACCCATCAACAACACCACCCTCAACCATGACCCCAGGCATCACACCACCCTCAACCATGACCCCAGGTATCACCCCGCCCTCGGTGTTCGGGGGCGGGATAAGCCCGACAGGCGGGGTCGGGCTCGGTGGTAGCGGGAGTAGCATGGATGGAAGCGCTGCCATTGCAGCAGCAGGCTGTAACATGTTGTTGTTGTTCATAGCCATTGTGACATCTTTGTTGTAATGTTGTTTGATGTGGGTGGAGAATATGGTTCCTTATTTGTGGAATGGGAACCTGATCCTGTTGGATGTTTTTTTTTCACCTTTTGTGTATCTATTAGAGGCTGTATTTTGCTTAATTTAATGGGGGGTTTTTGCAACCACTAATCAATAATTATGCTCTTTTTTCATTGTTAATTTGTTTTATAATAAAGTTTTATGGGATGTGTTACTATTGTTAAACATTTGAATTTAATTTTATTATAT ACGCTTAACCATGATTGAGCAATTGAAAAGAAACGTGCACTTTGTTGGCATAGATAGTAACTTTTATTTCCTTTAAACTTTTCTTAGTCATCCCATCACCAGAATCTGTCTCGGTTCATTCATACCTCTCCTTTACTCGGATGTTATACTTATACAGTATGAAAGATCCAAACCCAGAATCCACACAACTTATTTCTTATACATTCATAAAAATTAGTTTAAACCACTGGCTTTTATGTACAACAAAGTAAAATACATGACAAATCGTGGAACGTTCGAGATAAAGTTCCATACTTTTCTTCCTTTTTCTCATAAAGCTGTCTTTCTAGAATCTCATCTCTTCGAGTAGTCTACGAAACTTTCGTAGCTACTGCTTTACTAACTTTAATACTCGTCGATTTTCATTATATTAGTTCCGTAGCTAGTTTTTTAAGACGAACGCTTATAGGTGTTATGTGTGGGTTTATAATCCCTAGGGAATATAGAATTCCACGTTCCATTCATCACTACAACCACCTTTACAAGACTGATACCCAAAATAAAGTGAAGTGATATCAAAGCAACCACAAATTTCAAACCTTCCTCTCATTCTTTGCCCATTTTGATCATTTTGGCTTCATTTTACCTTAAGATTGGTATCATTCACTAATGGATGATCCAAAAGGATATCTGTTCTTAATCATCTCTGATAGCAAAACCCAGCTTTACAACACTCATGTTCTTGATTTCAATCATTTTAACAACTAAATGGACCAATTTCATAGCTTTTAGCTATCAAAATTGAAGTTTTTCAATCTCTAAACCACAAATTTTGATACCCATTTACCAAAATTCTAAGTTTTCAACTCCAAATTATGCTGATTATCATACCCATAATCCAAATTAGCTCTTGTTTAGCTAATAATGTTTTACTTTTGGATGCAAAGAATCTAAATATCTCATAGAACAAAAGGGAAATGGAAGGAAAAAGAAAGAAAAAGAAGGGAAAAAAAAAGGTGAATAGTGACACACAGGCACCGCCTCCACATTCTTTCCCCACTAGAAATCTCTATTTCCCTTCCCTCTCTCTCTCTCTCTCTGCTTCGCCACAGCTCTCTGTTCTGTTCTCTCTCGGAGTTCGTGTTCATCCATGGCGGTTCTCTTGTTCTTTTCCTTGATGTTCATGGCCTTCACCTCTCATTCAGATGCTATATATTGTGTTTGTAAAGATGGATTAAGCGACCAAGCCCTTCAAAAATCACTGGATTATGCTTGTGGAGCTGGAGCCGATTGTTCTCCAATCCTTCAAAATGGGGTTTGTTTTCAGCCTAATACTGTCAAAGATCATTGTAGCTATGCTGTTAATAGCTACTTTCAGCGCAAGGGTCAAGTCCAAGGGAGCTGTGATTTTTCAGGCACTGCCATGGCTAGCCAGTCTCCTCCTGCTGGAGCTTCTGGGTGTGTTTATCCTTCAAGTCCCAGCAACGCAGGAACCCCGTCGACCACCGTCCCGGGCACGACGCCAGGAACAATCACGAACCCATCAACAACACCACCCTCAACCATGACCCCAGGCATCACACCACCCTCAACCATGACCCCAGGTATCACCCCGCCCTCGGTGTTCGGGGGCGGGATAAGCCCGACAGGCGGGGTCGGGCTCGGTGGTAGCGGGAGTAGCATGGATGGAAGCGCTGCCATTGCAGCAGCAGGCTGTAACATGTTGTTGTTGTTCATAGCCATTGTGACATCTTTGTTGTAATGTTGTTTGATGTGGGTGGAGAATATGGTTCCTTATTTGTGGAATGGGAACCTGATCCTGTTGGATGTTTTTTTTTCACCTTTTGTGTATCTATTAGAGGCTGTATTTTGCTTAATTTAATGGGGGGTTTTTGCAACCACTAATCAATAATTATGCTCTTTTTTCATTGTTAATTTGTTTTATAATAAAGTTTTATGGGATGTGTTACTATTGTTAAACATTTGAATTTAATTTTATTATAT ATGGCGGTTCTCTTGTTCTTTTCCTTGATGTTCATGGCCTTCACCTCTCATTCAGATGCTATATATTGTGTTTGTAAAGATGGATTAAGCGACCAAGCCCTTCAAAAATCACTGGATTATGCTTGTGGAGCTGGAGCCGATTGTTCTCCAATCCTTCAAAATGGGGTTTGTTTTCAGCCTAATACTGTCAAAGATCATTGTAGCTATGCTGTTAATAGCTACTTTCAGCGCAAGGGTCAAGTCCAAGGGAGCTGTGATTTTTCAGGCACTGCCATGGCTAGCCAGTCTCCTCCTGCTGGAGCTTCTGGGTGTGTTTATCCTTCAAGTCCCAGCAACGCAGGAACCCCGTCGACCACCGTCCCGGGCACGACGCCAGGAACAATCACGAACCCATCAACAACACCACCCTCAACCATGACCCCAGGCATCACACCACCCTCAACCATGACCCCAGGTATCACCCCGCCCTCGGTGTTCGGGGGCGGGATAAGCCCGACAGGCGGGGTCGGGCTCGGTGGTAGCGGGAGTAGCATGGATGGAAGCGCTGCCATTGCAGCAGCAGGCTGTAACATGTTGTTGTTGTTCATAGCCATTGTGACATCTTTGTTGTAA MAVLLFFSLMFMAFTSHSDAIYCVCKDGLSDQALQKSLDYACGAGADCSPILQNGVCFQPNTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMASQSPPAGASGCVYPSSPSNAGTPSTTVPGTTPGTITNPSTTPPSTMTPGITPPSTMTPGITPPSVFGGGISPTGGVGLGGSGSSMDGSAAIAAAGCNMLLLFIAIVTSLL Homology
BLAST of Cp4.1LG07g00850 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 4.4e-32 Identity = 87/163 (53.37%), Postives = 107/163 (65.64%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.6e-26 Identity = 83/197 (42.13%), Postives = 112/197 (56.85%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 4.0e-25 Identity = 82/187 (43.85%), Postives = 112/187 (59.89%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 7.5e-24 Identity = 85/203 (41.87%), Postives = 119/203 (58.62%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. ExPASy Swiss-Prot
Match: Q9FZD0 (Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At1g26450 PE=2 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 5.4e-22 Identity = 81/183 (44.26%), Postives = 104/183 (56.83%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. NCBI nr
Match: XP_023537325.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 375 bits (964), Expect = 9.31e-131 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. NCBI nr
Match: XP_023002738.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita maxima]) HSP 1 Score: 373 bits (958), Expect = 7.65e-130 Identity = 202/203 (99.51%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. NCBI nr
Match: XP_022951389.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita moschata]) HSP 1 Score: 368 bits (945), Expect = 7.34e-128 Identity = 199/203 (98.03%), Postives = 200/203 (98.52%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. NCBI nr
Match: KAG6585243.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020166.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 368 bits (945), Expect = 7.34e-128 Identity = 199/203 (98.03%), Postives = 200/203 (98.52%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. NCBI nr
Match: XP_008445454.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo] >KAA0064762.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo var. makuwa]) HSP 1 Score: 264 bits (675), Expect = 1.04e-86 Identity = 149/183 (81.42%), Postives = 156/183 (85.25%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. ExPASy TrEMBL
Match: A0A6J1KUG1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita maxima OX=3661 GN=LOC111496509 PE=4 SV=1) HSP 1 Score: 373 bits (958), Expect = 3.70e-130 Identity = 202/203 (99.51%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. ExPASy TrEMBL
Match: A0A6J1GIL3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111454228 PE=4 SV=1) HSP 1 Score: 368 bits (945), Expect = 3.55e-128 Identity = 199/203 (98.03%), Postives = 200/203 (98.52%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. ExPASy TrEMBL
Match: A0A5A7V8S9 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00670 PE=4 SV=1) HSP 1 Score: 264 bits (675), Expect = 5.03e-87 Identity = 149/183 (81.42%), Postives = 156/183 (85.25%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. ExPASy TrEMBL
Match: A0A1S3BDH0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo OX=3656 GN=LOC103488471 PE=4 SV=1) HSP 1 Score: 264 bits (675), Expect = 5.03e-87 Identity = 149/183 (81.42%), Postives = 156/183 (85.25%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. ExPASy TrEMBL
Match: A0A0A0KDN8 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366460 PE=4 SV=1) HSP 1 Score: 260 bits (664), Expect = 2.37e-85 Identity = 146/183 (79.78%), Postives = 155/183 (84.70%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. TAIR 10
Match: AT1G13830.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 142.9 bits (359), Expect = 2.8e-34 Identity = 90/172 (52.33%), Postives = 112/172 (65.12%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 ) HSP 1 Score: 139.4 bits (350), Expect = 3.1e-33 Identity = 87/163 (53.37%), Postives = 107/163 (65.64%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. TAIR 10
Match: AT2G03505.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 133.3 bits (334), Expect = 2.2e-31 Identity = 76/145 (52.41%), Postives = 98/145 (67.59%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. TAIR 10
Match: AT5G61130.1 (plasmodesmata callose-binding protein 1 ) HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27 Identity = 83/197 (42.13%), Postives = 112/197 (56.85%), Query Frame = 0
BLAST of Cp4.1LG07g00850 vs. TAIR 10
Match: AT1G69295.1 (plasmodesmata callose-binding protein 4 ) HSP 1 Score: 116.3 bits (290), Expect = 2.8e-26 Identity = 82/187 (43.85%), Postives = 112/187 (59.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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