Cp4.1LG07g00680 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCGTATAATTGGAACCAAAGAAATCTTTAGAGCAGAGGAGAAAATGGCGCCTGGATGGTCTGTGATGGCGCCCGAGTCCCACCTGTTTCAGAGCTTGAATGGCCTTCAACAGCTAGCCGAGACGCGTCGCTTCAAGGTAATCTGATTAGTATTGCTTCCTCACGATTTGATCTTATTGAATTCTGGTTCTTCATACTTCATTTCTAAACTGAATCAAAGGTTGAATTTCAAAGTTTGTTTCAATTTCATTCCTTTCGATTGCGTTTTTTGACTTTAAACTTTTACCGGATCGATGAAACTTTCTTAACCGAATGTTTAATTCCATTTCTAGCCGAATCAAAGCTTGAATTTCTTCGTCCACTTCAGTTCCAACACTTTTAATGGCGTTTCTTGACTTGAAGCTTTTATTGGATCAGTAGTTGTTGAAGTTGAGTTGATGTGGAGAAGTCTCCAATGTTTGTTTAATTATATCCATGGCGACGCAATTTTTGGTTCTGCAAAATCTTGGAAATGTACTGTAGCCTAACTTATCTTTAAATGTTACGACGTACGCCACACATTCGAGTGCTTCTTAAAGTGGCTCAATTCTCAAATGCTGCTATGTTGGATTTCTGTCTCGTGAGATCGTGATAAATATTCTGGTGACTGTGCAGGCATGGTTTTTGGATCAATTTGGAGTTCTGCATGATGGAAAACAGCCTTATCCTGGAGCTGTTGTAGCGTGTGCGTTTCCATTCATTTGATTTAGCTCTTTGATGACTTTCCTTTCATTGACTGGGTTAGCTTCAGCACATTAGAGTTTGAGCACAACGCTAATAATTGCATTACTTCCATTTTGACGCAGTGGAAAAGTTGGCAGAATGTGGTACTAAGATGGTTATTATAAGTAATTCTTCAAGACGATCATCGACGACAATGGAAAAATTGAAGAGCCTTGGATTTGACCCCAGTCTATTTGTTGGAGCCATTACAAGTGGAGAACTTACTCATCGGTACCTGCACAGGTTGATAATCTTCTTTAAAACTTTATCAAGCTGCTAGTCTTTGTATTTTATACTCGCGAGTCTAACACAAACCCCATTTCATCCATGGTCGCCATGTATATTTGATTCAACGTAGTTCGTTTACACTGAGAACAGCATCATGTACACTGCGTAGTATATTTCTCTTACCATTATCCACTGGTTGCTTTAGTAGATATTTCTCTTTTTCTTTTTCATCGTTGGAGCAGTTTGCCTCTTACCGTGTTCATGATTGTCCCCTTCCAAAATGCAGATCGCATGCTTGTTATCTAACCATGAATATTATTATCGTATCTGGCAACACTGAGACTGCTTAATGGACAAAAAAAAAAAAAAAAATGCATACCTAAGTCCAGCAGCTACCTCCACGTTTTGTCTTCTTTTTGTTATTATATTTGTTTCTTCGAGATTGATTTTAAGGGAGGCTTTCCGTTTTAGTGAACTCATTTTATGGTTTCTGCTATCAAAAGGAGGGATGATGCGTGGTTTGCTGCTCTTGGTAGATCTTGCATTCACATGACTTGGAGTTCCCGTGGAGCCATATCACTTGAGGTTGAGTCATATCTGTGAATGTGTTGGTGTTTCTGTCGTCGTTCTGTACCTTTTCACAGTCGATCCCTGATTTCACGCCAACGCCACACACACACACACACACACACACACACAGAAAAGAGACTTGAAATTTGCAGCCTTGTGCAAGGATAATTGAGCGCTTTCTCAGCGCAGTTATATTTGCTGTTTAACTTGATTCCCTTATTTTTCAATTTTCAAGGGACTAAAATGCATGAGTTACTGGAAATTGTGAAAACTCTGAAGGCAGAGACGTGAAAATGTGAAGGGGGAACTTGTAGTGAACTCTGGATTTTTCCTGTCTGTAGGGTCTGGGACTAAGAGTTGTGGACAATGTTGAAGAAGCTGAGTTTATATTGGCCCATGGTACTGAAGCTTTGGGTCATCCTTCCGGTGATCCACTTCCAATGACACTCGAGGAACTCGAGAAAATATTGGAGCAGTGTGCAGCCAAAAAGATTCCCATGGTGGTAGCCAACCCAGATTATGTGACTGTTGAGGCTAGAGATCTGCGTGTAATGCCTGGTAAGAAATATATATTTGGTTACTTGGGAGGAGATTCATCTCTTCACCTCTTTATTTTCTTTTTTTTTTCCTCCCTATTTGTATCTCCTTTGTTTGTTATATGAATTTTTTCTCTCTTACCCAAAAAAAATGTTCACTTGTCAATGATAAATCAATGCAGTGAAAGCCTGCTTGAGATTCACAAAGTATTTTACACAGAAAAGGTGTTTATGATAACTCAGGTTCTTAGTTTGTAGGGCTCTTTTTACAGGACTAGTTACGTGATTTGAGTTGTAGGAAAATGAAATGATACATCGCTTTAATTGGATCTCTAAAAATTTCTCTGAAGGAAAAAAACCCACTCAGGTCCTTAGTTTGTAGGGCTCTTTGTATGCTGGTGATATAGAACACCAAGACTTTTATTGTTTAATTAGCCAATGTAATGAGAACTAGTGGTGTTTGCAGGTACACTTGCATCCAAATATGAAAAGCTCGGTGGTGAAGTGAAATGGATGGGCAAACCTGATAAGGTGATTTTGATTGTTTTGATTCGTTTAGCCTTGCTCGAATTGTTCGTATTAATTCATATGGCCTTTGATATTAGATTCTAAGTACAACTCCATTTTGGCCATGACCTTTAAACACAAAATTAGAAGTTTGATGACCTATCGAATACTTTTTAGTATTCAAGAACCTATTAGACACAAACTATAAACTTATAGTTAAATTTAATAATTTAGTCTCTAAACTTAAAATTTATAAAAGGTTAAGTTCTAACCTCAAAATCGCATTAAGGTTCCGCCTTATAGATAGGCGAATGCCATTTGGTCGAATTGGTTGTAGCTAATAGGAACTTCCTCGATGCCATTATTGTAGTAATCATTTTCCCTATGATATCAGATTATCTACCAAGCAGCAATGTCTATGGTTGGAGTGGATGCCTCTGATTCCATTGCTGTTGGCGATTCACTCCACCATGACATCAAGGGTGCAAATGCAGCTGGAATCCAATCAGTCTTCATAACTGGTGGCATTCATGCAACCGAACTTGGTCTTGGTAATTTTGACGAAATTGCTGATTTAAATTCTGTCAAAGCTCTAGCTTCAAAATATGATGCGTATCCGTCTTATGTACTGCCTTCATTCACGTGGTAGAGTGAGTTCCTTTCCTCTCTATCTATCTATGCTTACTTTTATGCATTTCCTTTACCATTCGAAGATCTGGAGTATTCTAGCGTCTCGTCGACTCATTGATATTGTTCGATATCAACCTTTTCTTGTGAAATATATTTGTTGCCGTGAAAATGAAATTTGAGAGGAAATAGAAAGACATATTCTGCTTCATATCACTTAGGAATGATTTGGTTTCTCTACTTCCAAATTTATTCTATTTTAATCTATATACTTTTAAATTTTTAAATTTAATCTTTTTACTTTTAAATAAAATCTTAAAATTGGTCGAACTTTAGAATATGGTTAAAGGTACAAAAGTCAAAGCATACTTTTTAAAGTAGAGGTACAAAATAGATAAACGTTCGAACCTAACAGACCAAATGAATAGATGCCTTGACAAGAACCAAAAATAATTATACTAAGTTAAACCTATTTTATTGAGTATATTCCTTAAAACTGAATTTAAAATCAATAATGTCGTACTAAATAATAATATTGATGTTATTAAAAAAAAATAATAATAAATAAAATTGTGGTCAACTGATGGACTATGTGTTTGACTTTTTTTTTTGGTGGGTTTGGCAGGTCTAATTGTTGACACTTAGGTTTGAAATTTCCTCTCAAAATTGCTCTGATTATGTTAAGTGTGTGTTTGAATTAGGAAACAAAATGTTACTTAGAAATATATTTTTATATAAAAAAAATAAAAATTAAAACATTTATATGTTTATTACATTTTTTTTAGTTTTTATATACAAGTTTGTTTGTTATATATTTAAAATCTTTCGACAAATACTATGACCACAGAGTGAGGTCGTGACATTAGTCTTTAATGGCGATCTCTAACAGTTAAGTAGCGGTGATTGCGAGTGGCATCTTGTGGGTCAAACAATCACGAGTGACGTTGGCATAAAAAGTGAAGGTAATGTAAGACTATTCTTACCATTTTTAAGCATATGTTTAACCTTAATAATAATTTTTCTCTATTTATCATTTGAATCGAATGCCAATTTAAATGCTCAATTTTTTCAGTTCATTTCAATTTTTTCAGTTCATTTAAAAAAAATATATTAAATAATTATTAAAACCCGTAAATTTTAAGAAAATATTTTTCTTTTGGAAGTCAATCTAAACACGTTTTAGATTTCTCAAACAATTTTTTATTAAAAAAACGAGACGCCATGTTATCAACTAGTTTACCTCGAATATTAAAAAAAAAAAA ATTCGTATAATTGGAACCAAAGAAATCTTTAGAGCAGAGGAGAAAATGGCGCCTGGATGGTCTGTGATGGCGCCCGAGTCCCACCTGTTTCAGAGCTTGAATGGCCTTCAACAGCTAGCCGAGACGCGTCGCTTCAAGGCATGGTTTTTGGATCAATTTGGAGTTCTGCATGATGGAAAACAGCCTTATCCTGGAGCTGTTGTAGCGTTGGAAAAGTTGGCAGAATGTGGTACTAAGATGGTTATTATAAGTAATTCTTCAAGACGATCATCGACGACAATGGAAAAATTGAAGAGCCTTGGATTTGACCCCAGTCTATTTGTTGGAGCCATTACAAGTGGAGAACTTACTCATCGGTACCTGCACAGGAGGGATGATGCGTGGTTTGCTGCTCTTGGTAGATCTTGCATTCACATGACTTGGAGTTCCCGTGGAGCCATATCACTTGAGGGTCTGGGACTAAGAGTTGTGGACAATGTTGAAGAAGCTGAGTTTATATTGGCCCATGGTACTGAAGCTTTGGGTCATCCTTCCGGTGATCCACTTCCAATGACACTCGAGGAACTCGAGAAAATATTGGAGCAGTGTGCAGCCAAAAAGATTCCCATGGTGGTAGCCAACCCAGATTATGTGACTGTTGAGGCTAGAGATCTGCGTGTAATGCCTGGTACACTTGCATCCAAATATGAAAAGCTCGGTGGTGAAGTGAAATGGATGGGCAAACCTGATAAGATTATCTACCAAGCAGCAATGTCTATGGTTGGAGTGGATGCCTCTGATTCCATTGCTGTTGGCGATTCACTCCACCATGACATCAAGGGTGCAAATGCAGCTGGAATCCAATCAGTCTTCATAACTGGTGGCATTCATGCAACCGAACTTGGTCTTGGTAATTTTGACGAAATTGCTGATTTAAATTCTGTCAAAGCTCTAGCTTCAAAATATGATGCGTATCCGTCTTATGTACTGCCTTCATTCACGTGGTAGATTAAGTAGCGGTGATTGCGAGTGGCATCTTGTGGGTCAAACAATCACGAGTGACGTTGGCATAAAAAGTGAAGGTAATGTAAGACTATTCTTACCATTTTTAAGCATATGTTTAACCTTAATAATAATTTTTCTCTATTTATCATTTGAATCGAATGCCAATTTAAATGCTCAATTTTTTCAGTTCATTTCAATTTTTTCAGTTCATTTAAAAAAAATATATTAAATAATTATTAAAACCCGTAAATTTTAAGAAAATATTTTTCTTTTGGAAGTCAATCTAAACACGTTTTAGATTTCTCAAACAATTTTTTATTAAAAAAACGAGACGCCATGTTATCAACTAGTTTACCTCGAATATTAAAAAAAAAAAA ATGGCGCCTGGATGGTCTGTGATGGCGCCCGAGTCCCACCTGTTTCAGAGCTTGAATGGCCTTCAACAGCTAGCCGAGACGCGTCGCTTCAAGGCATGGTTTTTGGATCAATTTGGAGTTCTGCATGATGGAAAACAGCCTTATCCTGGAGCTGTTGTAGCGTTGGAAAAGTTGGCAGAATGTGGTACTAAGATGGTTATTATAAGTAATTCTTCAAGACGATCATCGACGACAATGGAAAAATTGAAGAGCCTTGGATTTGACCCCAGTCTATTTGTTGGAGCCATTACAAGTGGAGAACTTACTCATCGGTACCTGCACAGGAGGGATGATGCGTGGTTTGCTGCTCTTGGTAGATCTTGCATTCACATGACTTGGAGTTCCCGTGGAGCCATATCACTTGAGGGTCTGGGACTAAGAGTTGTGGACAATGTTGAAGAAGCTGAGTTTATATTGGCCCATGGTACTGAAGCTTTGGGTCATCCTTCCGGTGATCCACTTCCAATGACACTCGAGGAACTCGAGAAAATATTGGAGCAGTGTGCAGCCAAAAAGATTCCCATGGTGGTAGCCAACCCAGATTATGTGACTGTTGAGGCTAGAGATCTGCGTGTAATGCCTGGTACACTTGCATCCAAATATGAAAAGCTCGGTGGTGAAGTGAAATGGATGGGCAAACCTGATAAGATTATCTACCAAGCAGCAATGTCTATGGTTGGAGTGGATGCCTCTGATTCCATTGCTGTTGGCGATTCACTCCACCATGACATCAAGGGTGCAAATGCAGCTGGAATCCAATCAGTCTTCATAACTGGTGGCATTCATGCAACCGAACTTGGTCTTGGTAATTTTGACGAAATTGCTGATTTAAATTCTGTCAAAGCTCTAGCTTCAAAATATGATGCGTATCCGTCTTATGTACTGCCTTCATTCACGTGGTAG MAPGWSVMAPESHLFQSLNGLQQLAETRRFKAWFLDQFGVLHDGKQPYPGAVVALEKLAECGTKMVIISNSSRRSSTTMEKLKSLGFDPSLFVGAITSGELTHRYLHRRDDAWFAALGRSCIHMTWSSRGAISLEGLGLRVVDNVEEAEFILAHGTEALGHPSGDPLPMTLEELEKILEQCAAKKIPMVVANPDYVTVEARDLRVMPGTLASKYEKLGGEVKWMGKPDKIIYQAAMSMVGVDASDSIAVGDSLHHDIKGANAAGIQSVFITGGIHATELGLGNFDEIADLNSVKALASKYDAYPSYVLPSFTW Homology
BLAST of Cp4.1LG07g00680 vs. ExPASy Swiss-Prot
Match: Q3ZBF9 (Chronophin OS=Bos taurus OX=9913 GN=PDXP PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 3.1e-08 Identity = 76/272 (27.94%), Postives = 112/272 (41.18%), Query Frame = 0
BLAST of Cp4.1LG07g00680 vs. ExPASy Swiss-Prot
Match: P60487 (Chronophin OS=Mus musculus OX=10090 GN=Pdxp PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 4.0e-08 Identity = 70/257 (27.24%), Postives = 104/257 (40.47%), Query Frame = 0
BLAST of Cp4.1LG07g00680 vs. ExPASy Swiss-Prot
Match: Q8VD52 (Chronophin OS=Rattus norvegicus OX=10116 GN=Pdxp PE=1 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 5.2e-08 Identity = 72/258 (27.91%), Postives = 106/258 (41.09%), Query Frame = 0
BLAST of Cp4.1LG07g00680 vs. ExPASy Swiss-Prot
Match: Q96GD0 (Chronophin OS=Homo sapiens OX=9606 GN=PDXP PE=1 SV=2) HSP 1 Score: 55.8 bits (133), Expect = 9.9e-07 Identity = 74/272 (27.21%), Postives = 109/272 (40.07%), Query Frame = 0
BLAST of Cp4.1LG07g00680 vs. ExPASy Swiss-Prot
Match: O32125 (Acid sugar phosphatase OS=Bacillus subtilis (strain 168) OX=224308 GN=yutF PE=1 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.9e-07 Identity = 59/256 (23.05%), Postives = 109/256 (42.58%), Query Frame = 0
BLAST of Cp4.1LG07g00680 vs. NCBI nr
Match: XP_023537475.1 (pyridoxal phosphate phosphatase [Cucurbita pepo subsp. pepo] >XP_023537476.1 pyridoxal phosphate phosphatase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 630 bits (1625), Expect = 7.65e-228 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0
BLAST of Cp4.1LG07g00680 vs. NCBI nr
Match: XP_022951290.1 (pyridoxal phosphate phosphatase [Cucurbita moschata] >XP_022951291.1 pyridoxal phosphate phosphatase [Cucurbita moschata] >KAG6585231.1 Pyridoxal phosphate phosphatase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 623 bits (1607), Expect = 4.24e-225 Identity = 309/313 (98.72%), Postives = 310/313 (99.04%), Query Frame = 0
BLAST of Cp4.1LG07g00680 vs. NCBI nr
Match: XP_023002867.1 (pyridoxal phosphate phosphatase [Cucurbita maxima] >XP_023002868.1 pyridoxal phosphate phosphatase [Cucurbita maxima]) HSP 1 Score: 623 bits (1607), Expect = 4.24e-225 Identity = 309/313 (98.72%), Postives = 311/313 (99.36%), Query Frame = 0
BLAST of Cp4.1LG07g00680 vs. NCBI nr
Match: XP_038886349.1 (pyridoxal phosphate phosphatase isoform X2 [Benincasa hispida]) HSP 1 Score: 610 bits (1572), Expect = 9.19e-220 Identity = 300/313 (95.85%), Postives = 309/313 (98.72%), Query Frame = 0
BLAST of Cp4.1LG07g00680 vs. NCBI nr
Match: XP_004144188.1 (pyridoxal phosphate phosphatase [Cucumis sativus]) HSP 1 Score: 603 bits (1556), Expect = 2.52e-217 Identity = 299/313 (95.53%), Postives = 306/313 (97.76%), Query Frame = 0
BLAST of Cp4.1LG07g00680 vs. ExPASy TrEMBL
Match: A0A6J1KKS3 (pyridoxal phosphate phosphatase OS=Cucurbita maxima OX=3661 GN=LOC111496604 PE=4 SV=1) HSP 1 Score: 623 bits (1607), Expect = 2.05e-225 Identity = 309/313 (98.72%), Postives = 311/313 (99.36%), Query Frame = 0
BLAST of Cp4.1LG07g00680 vs. ExPASy TrEMBL
Match: A0A6J1GH59 (pyridoxal phosphate phosphatase OS=Cucurbita moschata OX=3662 GN=LOC111454169 PE=4 SV=1) HSP 1 Score: 623 bits (1607), Expect = 2.05e-225 Identity = 309/313 (98.72%), Postives = 310/313 (99.04%), Query Frame = 0
BLAST of Cp4.1LG07g00680 vs. ExPASy TrEMBL
Match: A0A0A0KD58 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G365740 PE=4 SV=1) HSP 1 Score: 603 bits (1556), Expect = 1.22e-217 Identity = 299/313 (95.53%), Postives = 306/313 (97.76%), Query Frame = 0
BLAST of Cp4.1LG07g00680 vs. ExPASy TrEMBL
Match: A0A5A7VGA7 (Pyridoxal phosphate phosphatase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00450 PE=4 SV=1) HSP 1 Score: 603 bits (1554), Expect = 2.47e-217 Identity = 299/313 (95.53%), Postives = 305/313 (97.44%), Query Frame = 0
BLAST of Cp4.1LG07g00680 vs. ExPASy TrEMBL
Match: A0A1S3BCV5 (pyridoxal phosphate phosphatase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488490 PE=4 SV=1) HSP 1 Score: 602 bits (1553), Expect = 3.50e-217 Identity = 298/313 (95.21%), Postives = 305/313 (97.44%), Query Frame = 0
BLAST of Cp4.1LG07g00680 vs. TAIR 10
Match: AT5G10460.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein ) HSP 1 Score: 442.6 bits (1137), Expect = 2.7e-124 Identity = 211/302 (69.87%), Postives = 254/302 (84.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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