Cp4.1LG07g00180 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG07g00180
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	CCT-epsilon
Location	Cp4.1LG07: 179019 .. 186944 (+)
RNA-Seq Expression	Cp4.1LG07g00180
Synteny	Cp4.1LG07g00180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGTATTTGTGTAATACTCATTTACGTTATGGTATCAAATAATACTCATTTAAGTTCAAGTTTGTGTATAGCACATACCATATTATGTACCTCGTGAGCTTCATACTATAGGATGAAACGTTGTTTGATGCCTTGTAATCAACCTATTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTTGTAGTCCATAAGATTTTCTTCAAATATATATGATATTTTGTGTGTTCTGTTCATTAGAAAGTTTTGGCTGGAGCGTAGATTCTGTTTAATTTTATTCCATGGTTGGCTACTAACATCCCAGGAACTTCACTTGTGATCTCCTTTTCAGCTAATGATGGTGCAACAATCTTGGAGCAGATGGATGTTGACAATCAAATTGCAAAATTGATGGTTGAGTTATCCCGAAGTCAGGATTATGAAATTGGTGATGGCACCACTGGTGTGGTTGTAATGGCCGGTGCACTCTTAGAACAGGCTGAGCGATTATTAGAACGTGGAATTCATCCTATTCGAGTTGCAGAGGGTTATGAACTGGCCTCCAGGATAGCTGTTGACCATCTGGAGCATATTGCCCAGAAGTTTGATTTTGGAGAAACGAACTTAGAACCTTTGATTCAAACTTGCATGACCACTTTATCGTCAAAGATGTATGTTGACATGACTTCATAAGTGCAGTATACTCTGCTGTTTCATAACTGCATTGACATTTATGATTCTCCTTTCCAATAAGTTGGATGGACTAAATTTATTGGTGTTCTTCATGTTAAGGGTATCTAGCGTAACATTCTGATCTTTGTTTGATAAAAGTTAATAGACATTACATATCTTGTATGTTAATCTTGTGCCTCTACTGTGGTATTATCAGTTTAGTTTTCATGATATGTTATTTAATAGATTGCTAAGTGTTCCTATGTGTACCATGAATAGATATAAATTGTTAAACCCTGGTTTCCTCTTAATTTGGTTGCATCAGTGATTGTGTAAACTGACAGTGAAGTGATCTTATGATTTAATTTGGCAGACCAAAAAAAAGAAAAAAAGGGATAGTTGATGACTATTTATTATGCTGCATTGTGACTTCCTTACCTTTTATAGCCCCTTTTCTGATCTTGCAGTGTGAATCGTTGTAAGCGCAATCTAGCAGAAATTGCCGTGAAAGCGGTTGTTGCATGAAATCTGCGAATTGTATGGAAAGCCATAGAATCGCATTGTTTGTTAAAACAAACACATAATTTTGGGGGGAAACTCTGAATTCTGTGGCCCAAAATTTAGTGGGCTCCATTACGAGGCCCAAAATTCTGAAACCCAAGACGCGGGAAGCCCACAAGCACGGGGATGAATTCACTTAGGGCTTTTCCAAAGGGGGGAAACTCTAAAACCTCTCATCACAGTGGGAGATGCATTTCCAGGAGCTTCTCTGATATTTTTCTTTTCTTTGCTACTTCACAGTGGGAGATCCATTTCGTAGCTGTACGATCTGGAACTCTTAATCCGGGAGTCAAGCTGATCTCCGCGTACACATGGCGCTCGCTTTCGATGAGTATGGGAGGCCATTTATAATCTTGAAGGAGCAGGAGCAGAAGACCAGGTTGAGGGGTCTCGATGCTCAGAAGGCGAACATTGCTTCTGGCAAAGCTGTCGCTCGTATCCTCAGGACCTCACTTGGTCCTAAGGGCATGGACAAGATGCTCCAGAGCCCTGATGGCGACGTTACAATAAGTTAGTCTCGCTCACTCCTTTTGCTTGCTTTCTTTTTATGCAATTTTAGAACCATGTGCTTTGCCCAATGTTGGAATCTGGATGTTGCTTCTTAAAGGATTATAAGTGATAATCCGCTTTTTTTGTTTTAAAAAAATTGTTGATCTCCTCTTGGTTCTGCTGCTGCTTTTGCTGGTCTATAACTTTCGGATGTATAATTTCAGAATTTTAGACATCATAGGTAAGCAGAAATGGAAGTTTGAAGACTAAGAAGTGAGTTAGACTATGTAAACTATATCAGAGGAAGGTTATCCCTCATGAAATCTTGTGACGTTGGTCGCAGCTTCGTGCTGGCACTATTTTTCATCGGTGAATAATCATAGCCTTAAGTCAGGTGTCAAGATTCCGTTGTCATTCCACTTCATTCCCAACCCATTTTCCCCCCGAAACTTGGAACCTTTTCCCCACGCTCTCCGGACTGTATTCTTTTCTTAAAAAAGATTTTGTATACCTATGACGACCTCTGAATATCTGTCTAGTTTTTTCTTATATGGTATCAGAGATGTAATCGAAAACAATAAACTACTACCTTGTAGTCAATAAGATTTTCTTCAAATATATATGATATTTTGTGTGTTCTGTTCATTAGAAAGTTTTGGCTGGAGCGTAGATTCTGTTAATTTTATTCCATGGTTGGCTAACATTCCAGGGAACTTCACCTGTGATCTCCTTTTCAGCTAATGATGGTGCAACAATCTTGGAGCAGATGGATGTTGACAATCAAATTGCTAAATTGATGGTTGAGTTATCCCGAAGTCAGGATTATGAAATTGGTGATGGCACCACTGGTGTGGTTGTAATGGCCGGTGCACTCTTAGAACAGGCTGAGCGATTATTAGAACGTGGAATTCATCCTATTCGAGTTGCAGAGGGTTATGAACTGGCCTCCAGGATAGCTGTTGACCATCTGGAGCATATTGCCCAGAAGTTTGATTTTGGAGAAACGAACTTAGAACCTTTGATTCAAACTTGCATGACCACTTTATCGTCAAAGATGTATGTTGACATGACTTCATAAGTGCAGTATACTCTGCTGTTTCATAACTGCATTGACATTTATGATTCTCCTTTCTAATAAGTTGGATGGACTAAATTTATTGGTGTTCTTCATGTTAAGGGTATCTAGCGTAATATTCTGATCTTTGTTTGATAAAAGTTAATAGACATTACATATCTTGTATGTTAATCTTGTGCCTCTACTGTGGTATCATCAGTTTAGTTTTCATTATATGTTATTTAATTGATTGCAAAGTGTTCCTATCTGTACCATGAATAGATATAAATTGTTAAACCCTGGTTTCCTCTTAATTTGGTTGCATCAGTGTTTGTGTAAACTGACAGTGAAGTGATCTTATGATTTAATTTGGCAGACCAAAAGAAAAAAAAAAGGGATAGTTGATGACTATTTATTATGCTGCATTGTGACTTCATTACCTATTATAGCCCCTTTTCTGATCTTGCAGTGTGAATCGTTGCAAGCGCAATCTAGCAGAAATTGCCGTGAAAGCGGTTGTTGCTGTGGCAGATCTTGAAAGAAGGGATGTTAACTTAGATTTGATAAAAGTTGAGGGGAAAGTAGGGGGGAAGTTAGAAGATACGGAACTTGTATATGGTATTATTGTTGACAAGGACATGAGTCACCCTCAGATGCCAAAGCAAATTGAAGATGCTAAGATTGCCATCTTAACTTGCCCATTTGAACCACCTAAACCCAAGACAAAGCATAAGGTTGATATTGATTCAGTGGAGAAGTTCGAAACGTTAAGGCAACAGGAACAGAAGTACTTTGATGACATGGTTCAAAAATGCAAGGTAAAATGGAAATGCTTTATCTGGTCCTTCAGTATTATCAAATAATACAATGCTATCATCTATTTTCTGGTCCATTTGGCTTAATAGAAAGGTTTACTGGAAGTGGTTTGGAAGGATACCCTTCAATGAATCCTTTGGACTTCTCTCTCAGAGGATATTCCCCTACTTGGAATTATTAGTGTGGTTCTCTTAAATTTCCTTTAGTTCAGTACAGTGTTTGGCTATGTTCCATTGGTTTGGTTTTCTGAGGGTTTCTTTTTGCTGTTTCCATCTTTATTAATGAAATTTGGGCTTCTTCCTTTGTTTGATTTTCCCTCGTGAAGATTTATTTTTAGGCTCATACTGATACATTTTCTGTTTCAGAATGTTGGCGCGACATTGGTTATTTGTCAATGGGGGTTTGATGATGAGGCAAATCATCTGTTGATGCACCGAAATTTGCCAGCTGTCAGATGGGTTGGTGGTGTGGAACTAGAGTTGATTGCCATAGCCACAGGTTTAGCTCAACTATTTTATCAGCATTTTCAGTTATGTTTATGACCCATGAGGTTAGGTTTTGTAGTGAAAACCCTGAGATTCAACCTAGCAGCCATAGGTTTAAAACCCTCATGGGGTGGTTGTCTTTTGCTTATGGCTATTTTGACTTTTGATTCTCGAACCTAGTGGCTGTCTAGGGCCTTATAAAGGCGAATTGCACAATGGGAACAAGAGGATCAGATGGTTGAGCAAGAACTAAATGACGAATCATTGTTTTCAGTCCAAATTGCTTGGCTCAAAAAACTGAATTAAGCTAATGTTGGTTCTGTTCGGATCACTAGTTTTTCCAATTTTCTTCACCTAGGGTAACTTCACGTTCTGAATTACTTTGCTTAAATTGTTATTTTATTGACTTTATAGGCGGAAGAATAGTCCCTAGGTTCCAAGAATTGACATCAGAGAAACTTGGGAAGGTACTGCCTATCCCTTCTCATTATTTTGTATTATCTTTTTCTGAACTAATAAGCAGCTTGACTTATGTGAGCTCATTCTTTCACTTTGTGTATAATATCGCAAGCAGCTCTAACTCACAATGATATCTTCTTTTCTCTTCACCAAACTAGGCTGGCTTGGTAAGAGAAAAAGCATTTGGTACAACAAAAGATCGGATGCTATACATTGAACATTGTGCAAATTCAAGGGCTGTGACCATTTTTATCCGTGGAGGTTGGTAGATCCTCTTTTATTCTGTTCCTTCTTCAAGCAACATTTTGGCAGTTTTGCACTGATTTATAGATTAGGCTGTAGAATTTGTCTAATGGTTGGAGAAATGTTGTTGCAGTTGAACGGGATTTAGTATTTAAGAATTTTTAGTGCCAGTGGTGCTATAAGTACATGACTGGACGGCTGTTGTATAATAACAAGGCAGAAAAGATGAAAAATTGAGATTTTTCTCTTGAATGTGTTGATTTATCATCAAATATCCTAAATGANGCAGAAAAGATGAAAAATTGAGATTTTTCTCTTGAATGTGTTTATTTATCCCATCAAATAGACGTTCCTAAATCACATTCAAAAAATAAAATGTCAGAACCTAACATCTTGGTTTAAGACCTTCGATGATTATGAGCTCATGAGTTTATCCTGTGATGGTTTTAGGTAACAAGATGATGATAGAGGAGACAAAACGCAGTATCCATGATGCTTTGTGTGTGGCTAGGAATCTTATCCGCAATAATTCGATAGTATATGGTGGTGGTTCAGCTGAGATTTCTTGTTCAGTTGCTGTAGAGGCAGCTGCTGATAAATACCCTGGTGTTGAACAGGCATGAGGCTTTTATTTTATCTCCTGCCTTGCTAAATTGGAAAACGACGTTAAACATTTTCTCCCCCTTTTTTGCTTGCAGTATGCTATTAGGGCATTTGCTGATGCATTGGATTCTGTACCGATGGCTCTTGCGGAGAACAGTGGGTTACAGCCAATTGAAACACTTTCTGCTGTAAAATCTCAGCAAATTAAGGTAAGCGTGTGTGAATGACTCTTAGATTTTGATTTCAAGCTCGGACTTTGTATGAAGTATTCGCGATTAAATATGCAGGAGAACAATCCATACTGTGGAATAGACTGCAACGATGTGGGCACAAATGACATGCGGAAGCAAAATGTATTTGAGACTCTGATTGGAAAGCAACAACAGGTGTTATTGGCTACTCAGGTTGTGAAGATGATTCTGAAGATTGATGATGTGATCTCTTCTTCTGATTATTAATGTAATTGTGCTGTTTTGCTACCTGTCTTTGTATTGGCATGAGTCAGTGACTCGATTATTGAAAACTTCGGATTGTATGGTTTTGGGGATGTGATAGATTATTGTTTATGTGTGAATGGAAGGGATGAGCTCAGTACAAGCCTTCTCGATGTCATCTGGTTTATACGTGAGCAATGTGATATCAACTCATTTGGGGTACGTTCATTTATCTGGGATTCTGATATTAATCAACAATAGATGGAGGAATATTTTGTATGGACCTCTCTTCATCAGCCAT

mRNA sequence

ATGCATATTCTGTTTAATTTTATTCCATGGTTGGCTACTAACATCCCAGGAACTTCACTTGTGATCTCCTTTTCAGCTAATGATGGTGCAACAATCTTGGAGCAGATGGATGTTGACAATCAAATTGCAAAATTGATGGTTGAGTTATCCCGAAGTCAGGATTATGAAATTGGTGATGGCACCACTGGTGTGGTTGTAATGGCCGGTGCACTCTTAGAACAGGCTGAGCGATTATTAGAACGTGGAATTCATCCTATTCGAGTTGCAGAGGGTTATGAACTGGCCTCCAGGATAGCTGTTGACCATCTGGAGCATATTGCCCAGAAGTTTGATTTTGGAGAAACGAACTTAGAACCTTTGATTCAAACTTGCATGACCACTTTATCGTCAAAGATTCAAGCTGATCTCCGCGTACACATGGCGCTCGCTTTCGATGAGTATGGGAGGCCATTTATAATCTTGAAGGAGCAGGAGCAGAAGACCAGGTTGAGGGGTCTCGATGCTCAGAAGGCGAACATTGCTTCTGGCAAAGCTGTCGCTCGTATCCTCAGGACCTCACTTGGTCCTAAGGGCATGGACAAGATGCTCCAGAGCCCTGATGGCGACGTTACAATAACTAATGATGGTGCAACAATCTTGGAGCAGATGGATGTTGACAATCAAATTGCTAAATTGATGGTTGAGTTATCCCGAAGTCAGGATTATGAAATTGGTGATGGCACCACTGGTGTGGTTGTAATGGCCGGTGCACTCTTAGAACAGGCTGAGCGATTATTAGAACGTGGAATTCATCCTATTCGAGTTGCAGAGGGTTATGAACTGGCCTCCAGGATAGCTGTTGACCATCTGGAGCATATTGCCCAGAAGTTTGATTTTGGAGAAACGAACTTAGAACCTTTGATTCAAACTTGCATGACCACTTTATCGTCAAAGATTGTGAATCGTTGCAAGCGCAATCTAGCAGAAATTGCCGTGAAAGCGGTTGTTGCTGTGGCAGATCTTGAAAGAAGGGATGTTAACTTAGATTTGATAAAAGTTGAGGGGAAAGTAGGGGGGAAGTTAGAAGATACGGAACTTGTATATGGTATTATTGTTGACAAGGACATGAGTCACCCTCAGATGCCAAAGCAAATTGAAGATGCTAAGATTGCCATCTTAACTTGCCCATTTGAACCACCTAAACCCAAGACAAAGCATAAGGTTGATATTGATTCAGTGGAGAAGTTCGAAACGTTAAGGCAACAGGAACAGAAGTACTTTGATGACATGGTTCAAAAATGCAAGAATGTTGGCGCGACATTGGTTATTTGTCAATGGGGGTTTGATGATGAGGCAAATCATCTGTTGATGCACCGAAATTTGCCAGCTGTCAGATGGGTTGGTGGTGTGGAACTAGAGTTGATTGCCATAGCCACAGGCGGAAGAATAGTCCCTAGGTTCCAAGAATTGACATCAGAGAAACTTGGGAAGGCTGGCTTGGTAAGAGAAAAAGCATTTGGTACAACAAAAGATCGGATGCTATACATTGAACATTGTGCAAATTCAAGGGCTGTGACCATTTTTATCCGTGGAGGTAACAAGATGATGATAGAGGAGACAAAACGCAGTATCCATGATGCTTTGTGTGTGGCTAGGAATCTTATCCGCAATAATTCGATAGTATATGGTGGTGGTTCAGCTGAGATTTCTTGTTCAGTTGCTGTAGAGGCAGCTGCTGATAAATACCCTGGTTATGCTATTAGGGCATTTGCTGATGCATTGGATTCTGTACCGATGGCTCTTGCGGAGAACAGTGGGTTACAGCCAATTGAAACACTTTCTGCTGTAAAATCTCAGCAAATTAAGGAGAACAATCCATACTGTGGAATAGACTGCAACGATGTGGGCACAAATGACATGCGGAAGCAAAATGTATTTGAGACTCTGATTGGAAAGCAACAACAGGTGTTATTGGCTACTCAGGTTGTGAAGATGATTCTGAAGATTGATGATGTGATCTCTTCTTCTGATTATTAATGTAATTGTGCTGTTTTGCTACCTGTCTTTGTATTGGCATGAGTCAGTGACTCGATTATTGAAAACTTCGGATTGTATGGTTTTGGGGATGTGATAGATTATTGTTTATGTGTGAATGGAAGGGATGAGCTCAGTACAAGCCTTCTCGATGTCATCTGGTTTATACGTGAGCAATGTGATATCAACTCATTTGGGGTACGTTCATTTATCTGGGATTCTGATATTAATCAACAATAGATGGAGGAATATTTTGTATGGACCTCTCTTCATCAGCCAT

Coding sequence (CDS)

ATGCATATTCTGTTTAATTTTATTCCATGGTTGGCTACTAACATCCCAGGAACTTCACTTGTGATCTCCTTTTCAGCTAATGATGGTGCAACAATCTTGGAGCAGATGGATGTTGACAATCAAATTGCAAAATTGATGGTTGAGTTATCCCGAAGTCAGGATTATGAAATTGGTGATGGCACCACTGGTGTGGTTGTAATGGCCGGTGCACTCTTAGAACAGGCTGAGCGATTATTAGAACGTGGAATTCATCCTATTCGAGTTGCAGAGGGTTATGAACTGGCCTCCAGGATAGCTGTTGACCATCTGGAGCATATTGCCCAGAAGTTTGATTTTGGAGAAACGAACTTAGAACCTTTGATTCAAACTTGCATGACCACTTTATCGTCAAAGATTCAAGCTGATCTCCGCGTACACATGGCGCTCGCTTTCGATGAGTATGGGAGGCCATTTATAATCTTGAAGGAGCAGGAGCAGAAGACCAGGTTGAGGGGTCTCGATGCTCAGAAGGCGAACATTGCTTCTGGCAAAGCTGTCGCTCGTATCCTCAGGACCTCACTTGGTCCTAAGGGCATGGACAAGATGCTCCAGAGCCCTGATGGCGACGTTACAATAACTAATGATGGTGCAACAATCTTGGAGCAGATGGATGTTGACAATCAAATTGCTAAATTGATGGTTGAGTTATCCCGAAGTCAGGATTATGAAATTGGTGATGGCACCACTGGTGTGGTTGTAATGGCCGGTGCACTCTTAGAACAGGCTGAGCGATTATTAGAACGTGGAATTCATCCTATTCGAGTTGCAGAGGGTTATGAACTGGCCTCCAGGATAGCTGTTGACCATCTGGAGCATATTGCCCAGAAGTTTGATTTTGGAGAAACGAACTTAGAACCTTTGATTCAAACTTGCATGACCACTTTATCGTCAAAGATTGTGAATCGTTGCAAGCGCAATCTAGCAGAAATTGCCGTGAAAGCGGTTGTTGCTGTGGCAGATCTTGAAAGAAGGGATGTTAACTTAGATTTGATAAAAGTTGAGGGGAAAGTAGGGGGGAAGTTAGAAGATACGGAACTTGTATATGGTATTATTGTTGACAAGGACATGAGTCACCCTCAGATGCCAAAGCAAATTGAAGATGCTAAGATTGCCATCTTAACTTGCCCATTTGAACCACCTAAACCCAAGACAAAGCATAAGGTTGATATTGATTCAGTGGAGAAGTTCGAAACGTTAAGGCAACAGGAACAGAAGTACTTTGATGACATGGTTCAAAAATGCAAGAATGTTGGCGCGACATTGGTTATTTGTCAATGGGGGTTTGATGATGAGGCAAATCATCTGTTGATGCACCGAAATTTGCCAGCTGTCAGATGGGTTGGTGGTGTGGAACTAGAGTTGATTGCCATAGCCACAGGCGGAAGAATAGTCCCTAGGTTCCAAGAATTGACATCAGAGAAACTTGGGAAGGCTGGCTTGGTAAGAGAAAAAGCATTTGGTACAACAAAAGATCGGATGCTATACATTGAACATTGTGCAAATTCAAGGGCTGTGACCATTTTTATCCGTGGAGGTAACAAGATGATGATAGAGGAGACAAAACGCAGTATCCATGATGCTTTGTGTGTGGCTAGGAATCTTATCCGCAATAATTCGATAGTATATGGTGGTGGTTCAGCTGAGATTTCTTGTTCAGTTGCTGTAGAGGCAGCTGCTGATAAATACCCTGGTTATGCTATTAGGGCATTTGCTGATGCATTGGATTCTGTACCGATGGCTCTTGCGGAGAACAGTGGGTTACAGCCAATTGAAACACTTTCTGCTGTAAAATCTCAGCAAATTAAGGAGAACAATCCATACTGTGGAATAGACTGCAACGATGTGGGCACAAATGACATGCGGAAGCAAAATGTATTTGAGACTCTGATTGGAAAGCAACAACAGGTGTTATTGGCTACTCAGGTTGTGAAGATGATTCTGAAGATTGATGATGTGATCTCTTCTTCTGATTATTAA

Protein sequence

MHILFNFIPWLATNIPGTSLVISFSANDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLLERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIQADLRVHMALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLLERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRNLAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAFGTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGSAEISCSVAVEAAADKYPGYAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKENNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY

Homology

[Close]

BLAST of Cp4.1LG07g00180 vs. ExPASy Swiss-Prot
Match: O04450 (T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana OX=3702 GN=CCT5 PE=1 SV=1)

HSP 1 Score: 961.1 bits (2483), Expect = 6.7e-279
Identity = 481/535 (89.91%), Postives = 520/535 (97.20%), Query Frame = 0


Query: 140 MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 199
           MALAFDE+GRPFIIL+EQ+QKTRLRG+DAQKANIA+GKAVARILR+SLGPKGMDKMLQ P
Sbjct: 1   MALAFDEFGRPFIILREQDQKTRLRGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQGP 60

Query: 200 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 259
           DGD+TITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAER L
Sbjct: 61  DGDITITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQL 120

Query: 260 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 319
           +RGIHPIR+AEGYE+ASR+AV+HLE IAQKF+F   N EPL+QTCMTTLSSKIVNRCKR+
Sbjct: 121 DRGIHPIRIAEGYEMASRVAVEHLERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKRS 180

Query: 320 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 379
           LAEIAVKAV+AVADLERRDVNLDLIKVEGKVGGKLEDTEL+YGI++DKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVLAVADLERRDVNLDLIKVEGKVGGKLEDTELIYGILIDKDMSHPQMPKQIE 240

Query: 380 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQW 439
           DA IAILTCPFEPPKPKTKHKVDID+VEKFETLR+QEQ+YFD+MVQKCK+VGATLVICQW
Sbjct: 241 DAHIAILTCPFEPPKPKTKHKVDIDTVEKFETLRKQEQQYFDEMVQKCKDVGATLVICQW 300

Query: 440 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 499
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELT EKLGKAG+VREK+F
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGVVREKSF 360

Query: 500 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 559
           GTTK+RMLYIEHCANS+AVT+FIRGGNKMMIEETKRSIHDALCVARNLIRN SIVYGGG+
Sbjct: 361 GTTKERMLYIEHCANSKAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRNKSIVYGGGA 420

Query: 560 AEISCSVAVEAAADKYPG---YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 619
           AEI+CS+AV+AAADKYPG   YAIRAFA+ALDSVPMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEIACSLAVDAAADKYPGVEQYAIRAFAEALDSVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 620 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 672
           N P+ GIDCNDVGTNDMR+QNVFETLIGKQQQ+LLATQVVKMILKIDDVIS+S+Y
Sbjct: 481 NIPFYGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISNSEY 535

[Close]

BLAST of Cp4.1LG07g00180 vs. ExPASy Swiss-Prot
Match: P54411 (T-complex protein 1 subunit epsilon OS=Avena sativa OX=4498 PE=2 SV=1)

HSP 1 Score: 929.1 bits (2400), Expect = 2.8e-269
Identity = 469/535 (87.66%), Postives = 511/535 (95.51%), Query Frame = 0


Query: 140 MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 199
           MAL FDEY RPFIIL+EQE+K+RL+GLDAQKANIA+GK+VARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALDFDEYWRPFIILREQEKKSRLQGLDAQKANIAAGKSVARILRTSLGPKGMDKMLQSP 60

Query: 200 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 259
           DGDVTITNDGATILE MDVDNQIAKLMVELSRSQDY+IGDGTTGVVVMAG+LLEQAE+LL
Sbjct: 61  DGDVTITNDGATILELMDVDNQIAKLMVELSRSQDYDIGDGTTGVVVMAGSLLEQAEKLL 120

Query: 260 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 319
           ERGIHPIRVAEGYE+ASRIAVDHLE I+ K++F  T++EPL+QTCMTTLSSKIV+RCKR 
Sbjct: 121 ERGIHPIRVAEGYEMASRIAVDHLESISTKYEFSATDIEPLVQTCMTTLSSKIVSRCKRA 180

Query: 320 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 379
           LAEIAVKAV+AVADLER+DVNLDLIKVEGKVGGKLEDTELV GIIVDKDMSHPQMPK+IE
Sbjct: 181 LAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELVQGIIVDKDMSHPQMPKRIE 240

Query: 380 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQW 439
           DA IAILTCPFEPPKPKTKHKVDID+VEKF+TLR QEQKYFD+MVQKCK+VGATLVICQW
Sbjct: 241 DAHIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRGQEQKYFDEMVQKCKDVGATLVICQW 300

Query: 440 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 499
           GFDDEANHLLM R LPAVRWVGGVELELIAIATGGRIVPRFQEL++EKLGKAGLVREK+F
Sbjct: 301 GFDDEANHLLMQRELPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGLVREKSF 360

Query: 500 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 559
           GTTKDRMLYIE CANS+AVTIFIRGGNKMMIEETKRSIHDALCVARNLI NNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEKCANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGS 420

Query: 560 AEISCSVAVEAAADKYPG---YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 619
           AEISCS+AVEAAAD++PG   YAIRAFADALD++P+ALAENSGL PI+TL+ VKSQ +KE
Sbjct: 421 AEISCSIAVEAAADRHPGVEQYAIRAFADALDAIPLALAENSGLPPIDTLTVVKSQHVKE 480

Query: 620 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 672
           NN  CGIDCNDVGTNDM++QNVFETLIGKQQQ+LLATQVVKMILKIDDVI+ S+Y
Sbjct: 481 NNSRCGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVITPSEY 535

[Close]

BLAST of Cp4.1LG07g00180 vs. ExPASy Swiss-Prot
Match: P40412 (T-complex protein 1 subunit epsilon OS=Avena sativa OX=4498 PE=2 SV=1)

HSP 1 Score: 926.8 bits (2394), Expect = 1.4e-268
Identity = 467/535 (87.29%), Postives = 510/535 (95.33%), Query Frame = 0


Query: 140 MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 199
           MALAFDEYGRPFIIL+EQE+K+RL+GLDA KANIA+ KA+ARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEYGRPFIILREQEKKSRLQGLDAHKANIAAAKAIARILRTSLGPKGMDKMLQSP 60

Query: 200 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 259
           DGDVTITNDGATILE MDVDNQIAKL+VELSRSQDY+IGDGTTGVVVMAGALLEQAE+LL
Sbjct: 61  DGDVTITNDGATILELMDVDNQIAKLLVELSRSQDYDIGDGTTGVVVMAGALLEQAEKLL 120

Query: 260 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 319
           ERGIHPIRVAEGYE+ASRIAVDHLE I+ K++F  T++EPL+QTCMTTLSSKIV+RCKR 
Sbjct: 121 ERGIHPIRVAEGYEMASRIAVDHLESISTKYEFSATDIEPLVQTCMTTLSSKIVSRCKRA 180

Query: 320 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 379
           LAEI+VKAV+AVADLER+DVNLDLIKVEGKVGGKLEDTELV GIIVDKDMSHPQMPK+I 
Sbjct: 181 LAEISVKAVLAVADLERKDVNLDLIKVEGKVGGKLEDTELVEGIIVDKDMSHPQMPKRIY 240

Query: 380 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQW 439
           DA IAILTCPFEPPKPKTKHKVDID+VEKF+TLR QEQKYFD+MVQKCK+VGATLVICQW
Sbjct: 241 DAHIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRGQEQKYFDEMVQKCKDVGATLVICQW 300

Query: 440 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 499
           GFDDEANHLLM R LPAVRWVGGVELELIAIATGGRIVPRFQEL++EKLGKAGLVREK+F
Sbjct: 301 GFDDEANHLLMQRELPAVRWVGGVELELIAIATGGRIVPRFQELSTEKLGKAGLVREKSF 360

Query: 500 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 559
           GTTKDRMLYIE CANS+AVTIFIRGGNKMMIEETKRSIHDALCVARNLI NNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEKCANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGS 420

Query: 560 AEISCSVAVEAAADKYPG---YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 619
           AEISCS+AVEAAAD++PG   YAIRAFADALD++P+ALAENSGL PI+TL+ VKSQ +KE
Sbjct: 421 AEISCSIAVEAAADRHPGVEQYAIRAFADALDAIPLALAENSGLPPIDTLTVVKSQHVKE 480

Query: 620 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 672
           NN  CGIDCNDVGTNDM++QNVFETLIGKQQQ+LLATQVVKMILKIDDVI+ S+Y
Sbjct: 481 NNSRCGIDCNDVGTNDMKEQNVFETLIGKQQQILLATQVVKMILKIDDVITPSEY 535

[Close]

BLAST of Cp4.1LG07g00180 vs. ExPASy Swiss-Prot
Match: P48643 (T-complex protein 1 subunit epsilon OS=Homo sapiens OX=9606 GN=CCT5 PE=1 SV=1)

HSP 1 Score: 745.0 bits (1922), Expect = 7.6e-214
Identity = 365/527 (69.26%), Postives = 451/527 (85.58%), Query Frame = 0


Query: 142 LAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSPDG 201
           LAFDEYGRPF+I+K+Q++K+RL GL+A K++I + KAVA  +RTSLGP G+DKM+   DG
Sbjct: 7   LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDG 66

Query: 202 DVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLLER 261
           DVT+TNDGATIL  MDVD+QIAKLMVELS+SQD EIGDGTTGVVV+AGALLE+AE+LL+R
Sbjct: 67  DVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDR 126

Query: 262 GIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRNLA 321
           GIHPIR+A+GYE A+R+A++HL+ I+        + EPLIQT  TTL SK+VN C R +A
Sbjct: 127 GIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMA 186

Query: 322 EIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIEDA 381
           EIAV AV+ VAD+ERRDV+ +LIKVEGKVGG+LEDT+L+ G+IVDKD SHPQMPK++EDA
Sbjct: 187 EIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDA 246

Query: 382 KIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQWGF 441
           KIAILTCPFEPPKPKTKHK+D+ SVE ++ L++ E++ F++M+Q+ K  GA L ICQWGF
Sbjct: 247 KIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGF 306

Query: 442 DDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAFGT 501
           DDEANHLL+  NLPAVRWVGG E+ELIAIATGGRIVPRF ELT+EKLG AGLV+E +FGT
Sbjct: 307 DDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGT 366

Query: 502 TKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGSAE 561
           TKD+ML IE C NSRAVTIFIRGGNKM+IEE KRS+HDALCV RNLIR+N +VYGGG+AE
Sbjct: 367 TKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAE 426

Query: 562 ISCSVAVEAAADKYP---GYAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKENN 621
           ISC++AV   ADK P    YA+RAFADAL+ +PMAL+ENSG+ PI+T++ V+++Q+KE N
Sbjct: 427 ISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMN 486

Query: 622 PYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDV 666
           P  GIDC   GTNDM++Q+V ETLIGK+QQ+ LATQ+V+MILKIDD+
Sbjct: 487 PALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDI 533

[Close]

BLAST of Cp4.1LG07g00180 vs. ExPASy Swiss-Prot
Match: Q4R6V2 (T-complex protein 1 subunit epsilon OS=Macaca fascicularis OX=9541 GN=CCT5 PE=2 SV=1)

HSP 1 Score: 745.0 bits (1922), Expect = 7.6e-214
Identity = 365/527 (69.26%), Postives = 451/527 (85.58%), Query Frame = 0


Query: 142 LAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSPDG 201
           LAFDEYGRPF+I+K+Q++K+RL GL+A K++I + KAVA  +RTSLGP G+DKM+   DG
Sbjct: 7   LAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDG 66

Query: 202 DVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLLER 261
           DVT+TNDGATIL  MDVD+QIAKLMVELS+SQD EIGDGTTGVVV+AGALLE+AE+LL+R
Sbjct: 67  DVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDR 126

Query: 262 GIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRNLA 321
           GIHPIR+A+GYE A+R+A++HL+ I+        + EPLIQT  TTL SK+VN C R +A
Sbjct: 127 GIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMA 186

Query: 322 EIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIEDA 381
           EIAV AV+ VAD+ERRDV+ +LIKVEGKVGG+LEDT+L+ G+IVDKD SHPQMPK++EDA
Sbjct: 187 EIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDA 246

Query: 382 KIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQWGF 441
           KIAILTCPFEPPKPKTKHK+D+ SVE ++ L++ E++ F++M+Q+ K  GA L ICQWGF
Sbjct: 247 KIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGF 306

Query: 442 DDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAFGT 501
           DDEANHLL+  NLPAVRWVGG E+ELIAIATGGRIVPRF ELT+EKLG AGLV+E +FGT
Sbjct: 307 DDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGT 366

Query: 502 TKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGSAE 561
           TKD+ML IE C NSRAVTIFIRGGNKM+IEE KRS+HDALCV RNLIR+N +VYGGG+AE
Sbjct: 367 TKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAE 426

Query: 562 ISCSVAVEAAADKYP---GYAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKENN 621
           ISC++AV   ADK P    YA+RAFADAL+ +PMAL+ENSG+ PI+T++ V+++Q+KE N
Sbjct: 427 ISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMN 486

Query: 622 PYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDV 666
           P  GIDC   GTNDM++Q+V ETLIGK+QQ+ LATQ+V+MILKIDD+
Sbjct: 487 PALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDI 533

[Close]

BLAST of Cp4.1LG07g00180 vs. NCBI nr
Match: XP_031263871.1 (T-complex protein 1 subunit epsilon [Pistacia vera])

HSP 1 Score: 1122 bits (2901), Expect = 0.0
Identity = 574/678 (84.66%), Postives = 625/678 (92.18%), Query Frame = 0


Query: 27  NDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLLERGIHPI 86
           NDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVV+AGALLEQAE+LLERGIHPI
Sbjct: 68  NDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVLAGALLEQAEQLLERGIHPI 127

Query: 87  RVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIQADL---RVH---- 146
           R+AEGYE+ASRIA +HL+ IAQKF+F  +N+EPL+QTCMTTL+SKI       + H    
Sbjct: 128 RIAEGYEMASRIAFEHLDRIAQKFEFEVSNIEPLVQTCMTTLNSKIPPSRYKSQCHYARK 187

Query: 147 -----------------------MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASG 206
                                  MALAFDE+GRPFI++K+Q++K+RLRGLDAQKANI++G
Sbjct: 188 ASTFFLKSDSVRGCNTENPEDKKMALAFDEFGRPFILIKQQDEKSRLRGLDAQKANISAG 247

Query: 207 KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYE 266
           KAV+RILRTSLGPKGMDKMLQSPDGDV ITNDGATILEQMDVDNQIAKLMVELSRSQDYE
Sbjct: 248 KAVSRILRTSLGPKGMDKMLQSPDGDVVITNDGATILEQMDVDNQIAKLMVELSRSQDYE 307

Query: 267 IGDGTTGVVVMAGALLEQAERLLERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETN 326
           IGDGTTGVVV+AGALLEQAE+LLERGIHPIR+AEGYE+ASRIA +HL+ IAQKF+F  +N
Sbjct: 308 IGDGTTGVVVLAGALLEQAEQLLERGIHPIRIAEGYEMASRIAFEHLDRIAQKFEFEVSN 367

Query: 327 LEPLIQTCMTTLSSKIVNRCKRNLAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLED 386
           +EPL+QTCMTTL+SK+VNRCKR+LAEIAVKAV++VADLER+DVNLDLIKVEGKVGGKLED
Sbjct: 368 IEPLVQTCMTTLNSKMVNRCKRSLAEIAVKAVLSVADLERKDVNLDLIKVEGKVGGKLED 427

Query: 387 TELVYGIIVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQE 446
           TELVYGI VDKDMSHPQMPK+IEDAKIAILTCPFEPPKPKTKHKVDID+VEKF+TLR QE
Sbjct: 428 TELVYGITVDKDMSHPQMPKRIEDAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQE 487

Query: 447 QKYFDDMVQKCKNVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRI 506
           QKYFDDMVQKCK+VGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRI
Sbjct: 488 QKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRI 547

Query: 507 VPRFQELTSEKLGKAGLVREKAFGTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRS 566
           VPRFQELT EKLGKAG+VREK+FGTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRS
Sbjct: 548 VPRFQELTPEKLGKAGVVREKSFGTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRS 607

Query: 567 IHDALCVARNLIRNNSIVYGGGSAEISCSVAVEAAADKYPG---YAIRAFADALDSVPMA 626
           +HDALCVARNLIRNNSIVYGGGSAE+SCS+AVEAAAD+YPG   YAIRAFADALD VPMA
Sbjct: 608 VHDALCVARNLIRNNSIVYGGGSAEVSCSIAVEAAADRYPGVEQYAIRAFADALDFVPMA 667

Query: 627 LAENSGLQPIETLSAVKSQQIKENNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLAT 671
           LAENSGLQPIETLSAVKSQQIKENNPYCGIDCNDVGT DMR+QNVFETLIGKQQQ+LLAT
Sbjct: 668 LAENSGLQPIETLSAVKSQQIKENNPYCGIDCNDVGTTDMREQNVFETLIGKQQQILLAT 727

[Close]

BLAST of Cp4.1LG07g00180 vs. NCBI nr
Match: XP_023538326.1 (T-complex protein 1 subunit epsilon-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1028 bits (2657), Expect = 0.0
Identity = 532/535 (99.44%), Postives = 532/535 (99.44%), Query Frame = 0


Query: 140 MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 199
           MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 60

Query: 200 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 259
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 260 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 319
           ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN
Sbjct: 121 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 180

Query: 320 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 379
           LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 380 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQW 439
           DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQW 300

Query: 440 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 499
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360

Query: 500 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 559
           GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 560 AEISCSVAVEAAADKYPG---YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 619
           AEISCSVAVEAAADKYPG   YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 620 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 671
           NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY
Sbjct: 481 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 535

[Close]

BLAST of Cp4.1LG07g00180 vs. NCBI nr
Match: XP_022951552.1 (T-complex protein 1 subunit epsilon-like [Cucurbita moschata])

HSP 1 Score: 1026 bits (2652), Expect = 0.0
Identity = 531/535 (99.25%), Postives = 532/535 (99.44%), Query Frame = 0


Query: 140 MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 199
           MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 60

Query: 200 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 259
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 260 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 319
           ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN
Sbjct: 121 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 180

Query: 320 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 379
           LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 380 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQW 439
           DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCK+VGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 440 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 499
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360

Query: 500 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 559
           GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 560 AEISCSVAVEAAADKYPG---YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 619
           AEISCSVAVEAAADKYPG   YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 620 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 671
           NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY
Sbjct: 481 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 535

[Close]

BLAST of Cp4.1LG07g00180 vs. NCBI nr
Match: XP_023001984.1 (T-complex protein 1 subunit epsilon [Cucurbita maxima])

HSP 1 Score: 1024 bits (2647), Expect = 0.0
Identity = 529/535 (98.88%), Postives = 532/535 (99.44%), Query Frame = 0


Query: 140 MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 199
           MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 60

Query: 200 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 259
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 260 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 319
           ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN
Sbjct: 121 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 180

Query: 320 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 379
           LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 380 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQW 439
           D+KIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCK+VGATLVICQW
Sbjct: 241 DSKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 440 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 499
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360

Query: 500 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 559
           GTTKDRM+YIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMIYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 560 AEISCSVAVEAAADKYPG---YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 619
           AEISCSVAVEAAADKYPG   YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 620 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 671
           NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY
Sbjct: 481 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 535

[Close]

BLAST of Cp4.1LG07g00180 vs. NCBI nr
Match: KAG6585190.1 (T-complex protein 1 subunit epsilon, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1023 bits (2646), Expect = 0.0
Identity = 530/535 (99.07%), Postives = 531/535 (99.25%), Query Frame = 0


Query: 140 MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 199
           MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 60

Query: 200 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 259
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 260 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 319
           ERGIHPIRVAEGYELASRIAVDHLEHIAQ FDFGETNLEPLIQTCMTTLSSKIVNRCKRN
Sbjct: 121 ERGIHPIRVAEGYELASRIAVDHLEHIAQTFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 180

Query: 320 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 379
           LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 380 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQW 439
           DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCK+VGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 440 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 499
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360

Query: 500 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 559
           GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 560 AEISCSVAVEAAADKYPG---YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 619
           AEISCSVAVEAAADKYPG   YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 620 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 671
           NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY
Sbjct: 481 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 535

[Close]

BLAST of Cp4.1LG07g00180 vs. ExPASy TrEMBL
Match: A0A6J1GI10 (CCT-epsilon OS=Cucurbita moschata OX=3662 GN=LOC111454330 PE=3 SV=1)

HSP 1 Score: 1026 bits (2652), Expect = 0.0
Identity = 531/535 (99.25%), Postives = 532/535 (99.44%), Query Frame = 0


Query: 140 MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 199
           MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 60

Query: 200 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 259
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 260 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 319
           ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN
Sbjct: 121 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 180

Query: 320 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 379
           LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 380 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQW 439
           DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCK+VGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 440 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 499
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360

Query: 500 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 559
           GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 560 AEISCSVAVEAAADKYPG---YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 619
           AEISCSVAVEAAADKYPG   YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 620 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 671
           NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY
Sbjct: 481 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 535

[Close]

BLAST of Cp4.1LG07g00180 vs. ExPASy TrEMBL
Match: A0A6J1KP56 (CCT-epsilon OS=Cucurbita maxima OX=3661 GN=LOC111496003 PE=3 SV=1)

HSP 1 Score: 1024 bits (2647), Expect = 0.0
Identity = 529/535 (98.88%), Postives = 532/535 (99.44%), Query Frame = 0


Query: 140 MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 199
           MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 60

Query: 200 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 259
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 260 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 319
           ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN
Sbjct: 121 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 180

Query: 320 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 379
           LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 380 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQW 439
           D+KIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCK+VGATLVICQW
Sbjct: 241 DSKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 440 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 499
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360

Query: 500 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 559
           GTTKDRM+YIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMIYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 560 AEISCSVAVEAAADKYPG---YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 619
           AEISCSVAVEAAADKYPG   YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 620 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 671
           NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY
Sbjct: 481 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 535

[Close]

BLAST of Cp4.1LG07g00180 vs. ExPASy TrEMBL
Match: A0A0A0LNE6 (CCT-epsilon OS=Cucumis sativus OX=3659 GN=Csa_2G350200 PE=3 SV=1)

HSP 1 Score: 1008 bits (2607), Expect = 0.0
Identity = 519/535 (97.01%), Postives = 528/535 (98.69%), Query Frame = 0


Query: 140 MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 199
           MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 60

Query: 200 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 259
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 260 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 319
           ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGE NLEPLIQTCMTTLSSKIVNRCKR+
Sbjct: 121 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGEKNLEPLIQTCMTTLSSKIVNRCKRS 180

Query: 320 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 379
           LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 380 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQW 439
           DAKIAILTCPFEPPKPKTKHKVDID+VEKF+TLR QEQKYFDDMVQKCK+VGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 440 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 499
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREK+F
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKSF 360

Query: 500 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 559
           GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 560 AEISCSVAVEAAADKYPG---YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 619
           AEISCSVAVE AADKYPG   YAIRAFADALD+VPMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVETAADKYPGVEQYAIRAFADALDAVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 620 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 671
           NNPYCGIDCND+GTNDMR+QNVFETLIGKQQQ+LLATQVVKMILKIDDVIS SDY
Sbjct: 481 NNPYCGIDCNDIGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSDY 535

[Close]

BLAST of Cp4.1LG07g00180 vs. ExPASy TrEMBL
Match: A0A6J1HF21 (CCT-epsilon OS=Cucurbita moschata OX=3662 GN=LOC111462873 PE=3 SV=1)

HSP 1 Score: 1004 bits (2597), Expect = 0.0
Identity = 514/535 (96.07%), Postives = 530/535 (99.07%), Query Frame = 0


Query: 140 MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 199
           MALAFDE+GRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 60

Query: 200 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 259
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 260 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 319
           ERGIHPIR+AEGYELAS+IAVDHLEHIAQKFDFGET+LEPL+QTCMTTLSSKIVNRCKR+
Sbjct: 121 ERGIHPIRIAEGYELASKIAVDHLEHIAQKFDFGETDLEPLVQTCMTTLSSKIVNRCKRS 180

Query: 320 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 379
           LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 380 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQW 439
           DAKIAILTCPFEPPKPKTKHKVDID+VEKF+TLR QEQKYFDDMVQKCK+VGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 440 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 499
           GFDDEANHLL+HRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREK+F
Sbjct: 301 GFDDEANHLLLHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKSF 360

Query: 500 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 559
           GTTKDRM+YIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMIYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 560 AEISCSVAVEAAADKYPG---YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 619
           AEISCSVAVEAAADKYPG   YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 620 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 671
           NNPYCGIDCND+GTNDMR+QNVFETLIGKQQQ+LLATQVVKMILKIDDVIS S+Y
Sbjct: 481 NNPYCGIDCNDIGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSEY 535

[Close]

BLAST of Cp4.1LG07g00180 vs. ExPASy TrEMBL
Match: A0A6J1BQJ9 (CCT-epsilon OS=Momordica charantia OX=3673 GN=LOC111004839 PE=3 SV=1)

HSP 1 Score: 1004 bits (2595), Expect = 0.0
Identity = 514/535 (96.07%), Postives = 528/535 (98.69%), Query Frame = 0


Query: 140 MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 199
           MALAFDE+GRPFIILKEQEQKTRLRGLDAQKA+IASG+AVARILRTSLGPKGMDKMLQSP
Sbjct: 1   MALAFDEFGRPFIILKEQEQKTRLRGLDAQKASIASGRAVARILRTSLGPKGMDKMLQSP 60

Query: 200 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 259
           DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL
Sbjct: 61  DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 120

Query: 260 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 319
           ERGIHPIR+AEGYELASRIAVDHLEHIAQKFDFG+ N EPL+QTCMTTLSSKIVNRCKRN
Sbjct: 121 ERGIHPIRIAEGYELASRIAVDHLEHIAQKFDFGDRNFEPLVQTCMTTLSSKIVNRCKRN 180

Query: 320 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 379
           LAEIAVKAVVAVADL+RRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVVAVADLDRRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 240

Query: 380 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQW 439
           DAKIAILTCPFEPPKPKTKHKVDID+VEKF+TLR QEQKYFDDMVQKCK+VGATLVICQW
Sbjct: 241 DAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRLQEQKYFDDMVQKCKDVGATLVICQW 300

Query: 440 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 499
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 360

Query: 500 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 559
           GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS
Sbjct: 361 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 420

Query: 560 AEISCSVAVEAAADKYPG---YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 619
           AEISCSVAVEAAADKYPG   YAIRAFADALDS+PMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEISCSVAVEAAADKYPGVEQYAIRAFADALDSIPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 620 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 671
           NNPYCGIDCNDVGTNDMR+QNVFETLIGKQQQ+LLATQVVK+ILKIDDVIS SDY
Sbjct: 481 NNPYCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKLILKIDDVISPSDY 535

[Close]

BLAST of Cp4.1LG07g00180 vs. TAIR 10
Match: AT1G24510.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 961.1 bits (2483), Expect = 4.8e-280
Identity = 481/535 (89.91%), Postives = 520/535 (97.20%), Query Frame = 0


Query: 140 MALAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSP 199
           MALAFDE+GRPFIIL+EQ+QKTRLRG+DAQKANIA+GKAVARILR+SLGPKGMDKMLQ P
Sbjct: 1   MALAFDEFGRPFIILREQDQKTRLRGIDAQKANIAAGKAVARILRSSLGPKGMDKMLQGP 60

Query: 200 DGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLL 259
           DGD+TITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAER L
Sbjct: 61  DGDITITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQL 120

Query: 260 ERGIHPIRVAEGYELASRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRN 319
           +RGIHPIR+AEGYE+ASR+AV+HLE IAQKF+F   N EPL+QTCMTTLSSKIVNRCKR+
Sbjct: 121 DRGIHPIRIAEGYEMASRVAVEHLERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKRS 180

Query: 320 LAEIAVKAVVAVADLERRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIE 379
           LAEIAVKAV+AVADLERRDVNLDLIKVEGKVGGKLEDTEL+YGI++DKDMSHPQMPKQIE
Sbjct: 181 LAEIAVKAVLAVADLERRDVNLDLIKVEGKVGGKLEDTELIYGILIDKDMSHPQMPKQIE 240

Query: 380 DAKIAILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQW 439
           DA IAILTCPFEPPKPKTKHKVDID+VEKFETLR+QEQ+YFD+MVQKCK+VGATLVICQW
Sbjct: 241 DAHIAILTCPFEPPKPKTKHKVDIDTVEKFETLRKQEQQYFDEMVQKCKDVGATLVICQW 300

Query: 440 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAF 499
           GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELT EKLGKAG+VREK+F
Sbjct: 301 GFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGVVREKSF 360

Query: 500 GTTKDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGS 559
           GTTK+RMLYIEHCANS+AVT+FIRGGNKMMIEETKRSIHDALCVARNLIRN SIVYGGG+
Sbjct: 361 GTTKERMLYIEHCANSKAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRNKSIVYGGGA 420

Query: 560 AEISCSVAVEAAADKYPG---YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKE 619
           AEI+CS+AV+AAADKYPG   YAIRAFA+ALDSVPMALAENSGLQPIETLSAVKSQQIKE
Sbjct: 421 AEIACSLAVDAAADKYPGVEQYAIRAFAEALDSVPMALAENSGLQPIETLSAVKSQQIKE 480

Query: 620 NNPYCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 672
           N P+ GIDCNDVGTNDMR+QNVFETLIGKQQQ+LLATQVVKMILKIDDVIS+S+Y
Sbjct: 481 NIPFYGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISNSEY 535

[Close]

BLAST of Cp4.1LG07g00180 vs. TAIR 10
Match: AT1G24510.2 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 825.5 bits (2131), Expect = 3.1e-239
Identity = 413/459 (89.98%), Postives = 445/459 (96.95%), Query Frame = 0


Query: 216 MDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLLERGIHPIRVAEGYELA 275
           MDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAER L+RGIHPIR+AEGYE+A
Sbjct: 1   MDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERQLDRGIHPIRIAEGYEMA 60

Query: 276 SRIAVDHLEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRNLAEIAVKAVVAVADLE 335
           SR+AV+HLE IAQKF+F   N EPL+QTCMTTLSSKIVNRCKR+LAEIAVKAV+AVADLE
Sbjct: 61  SRVAVEHLERIAQKFEFDVNNYEPLVQTCMTTLSSKIVNRCKRSLAEIAVKAVLAVADLE 120

Query: 336 RRDVNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIEDAKIAILTCPFEPPKP 395
           RRDVNLDLIKVEGKVGGKLEDTEL+YGI++DKDMSHPQMPKQIEDA IAILTCPFEPPKP
Sbjct: 121 RRDVNLDLIKVEGKVGGKLEDTELIYGILIDKDMSHPQMPKQIEDAHIAILTCPFEPPKP 180

Query: 396 KTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQWGFDDEANHLLMHRNLP 455
           KTKHKVDID+VEKFETLR+QEQ+YFD+MVQKCK+VGATLVICQWGFDDEANHLLMHRNLP
Sbjct: 181 KTKHKVDIDTVEKFETLRKQEQQYFDEMVQKCKDVGATLVICQWGFDDEANHLLMHRNLP 240

Query: 456 AVRWVGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAFGTTKDRMLYIEHCANS 515
           AVRWVGGVELELIAIATGGRIVPRFQELT EKLGKAG+VREK+FGTTK+RMLYIEHCANS
Sbjct: 241 AVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGVVREKSFGTTKERMLYIEHCANS 300

Query: 516 RAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGSAEISCSVAVEAAADKY 575
           +AVT+FIRGGNKMMIEETKRSIHDALCVARNLIRN SIVYGGG+AEI+CS+AV+AAADKY
Sbjct: 301 KAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRNKSIVYGGGAAEIACSLAVDAAADKY 360

Query: 576 PG---YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKENNPYCGIDCNDVGTND 635
           PG   YAIRAFA+ALDSVPMALAENSGLQPIETLSAVKSQQIKEN P+ GIDCNDVGTND
Sbjct: 361 PGVEQYAIRAFAEALDSVPMALAENSGLQPIETLSAVKSQQIKENIPFYGIDCNDVGTND 420

Query: 636 MRKQNVFETLIGKQQQVLLATQVVKMILKIDDVISSSDY 672
           MR+QNVFETLIGKQQQ+LLATQVVKMILKIDDVIS+S+Y
Sbjct: 421 MREQNVFETLIGKQQQILLATQVVKMILKIDDVISNSEY 459

[Close]

BLAST of Cp4.1LG07g00180 vs. TAIR 10
Match: AT3G18190.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 301.2 bits (770), Expect = 2.1e-81
Identity = 183/512 (35.74%), Postives = 302/512 (58.98%), Query Frame = 0


Query: 167 DAQKANIASGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLM 226
           D + ANI S +AV+  +RTSLGPKGMDKM+ + +G+V ITNDGATIL +M+V    AK++
Sbjct: 28  DIRFANINSARAVSDAVRTSLGPKGMDKMISTANGEVIITNDGATILNKMEVLQPAAKML 87

Query: 227 VELSRSQDYEIGDGTTGVVVMAGALLEQAERLLERGIHPIRVAEGYELASRIAVDHLEHI 286
           VELS+SQD   GDGTT VVV+AGALL++ + LL  GIHP  +++    A   A+D L  +
Sbjct: 88  VELSKSQDSAAGDGTTTVVVIAGALLKECQSLLTNGIHPTVISDSLHKACGKAIDILTAM 147

Query: 287 AQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRNLAEIAVKAVVAVADLERRD-VNLDLIK 346
           A   +   T+ + L+++  T+L+SK+V++    LA +AV AV++V D E+ + V+L  IK
Sbjct: 148 AVPVEL--TDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDAVLSVIDPEKPEIVDLRDIK 207

Query: 347 VEGKVGGKLEDTELVYGIIVDKDMSHPQ-MPKQIEDAKIAILTCPFEPPKPKTKHKVDID 406
           +  K+GG ++DT  V G++ DK +S     P ++E+AKIA++     PPK   +  + + 
Sbjct: 208 IVKKLGGTVDDTHTVKGLVFDKKVSRAAGGPTRVENAKIAVIQFQISPPKTDIEQSIVVS 267

Query: 407 SVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQWGF-----DDEANHLLMHRNLPAVRW 466
              + + + ++E+ Y   M++K K  G  +++ Q         D + H L    +  ++ 
Sbjct: 268 DYTQMDRILKEERNYILGMIKKIKATGCNVLLIQKSILRDAVTDLSLHYLAKAKIMVIKD 327

Query: 467 VGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAFGTTKDRMLYIEHCAN-SRAV 526
           V   E+E +        +   +   +EKLG A LV E + G  K  +L I    +  R  
Sbjct: 328 VERDEIEFVTKTLNCLPIANIEHFRAEKLGHADLVEEASLGDGK--ILKITGIKDMGRTT 387

Query: 527 TIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGSAEISCSVAVEAAA---DKY 586
           ++ +RG N+++++E +RS+HDALCV R L+    ++ GGG+ EI  S  + A A      
Sbjct: 388 SVLVRGSNQLVLDEAERSLHDALCVVRCLVSKRFLIAGGGAPEIELSRQLGAWAKVLHGM 447

Query: 587 PGYAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKENNPYCGIDCNDVGTNDMRK 646
            GY +++FA+AL+ +P  LAEN+GL PI  ++ ++++   +     GI+       ++ +
Sbjct: 448 EGYCVKSFAEALEVIPYTLAENAGLNPIAIVTELRNKH-AQGEINAGINVRKGQITNILE 507

Query: 647 QNVFETLIGKQQQVLLATQVVKMILKIDDVIS 668
           +NV + L+     + LAT+ V+MILKIDD+++
Sbjct: 508 ENVVQPLLVSTSAITLATECVRMILKIDDIVT 534

[Close]

BLAST of Cp4.1LG07g00180 vs. TAIR 10
Match: AT5G20890.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 273.1 bits (697), Expect = 6.0e-73
Identity = 173/511 (33.86%), Postives = 286/511 (55.97%), Query Frame = 0


Query: 164 RGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSPDGD--VTITNDGATILEQMDVDNQ 223
           +G  A+ A+     A++ +++++LGPKGMDK+LQS      VT+TNDGATIL+ + +DN 
Sbjct: 15  KGERARMASFVGAMAISDLVKSTLGPKGMDKILQSTGRGHAVTVTNDGATILKSLHIDNP 74

Query: 224 IAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLLERGIHPIRVAEGYELASRIAVD 283
            AK++V++S+ QD E+GDGTT VVV+AG LL +AE+L+   IHP+ +  GY +AS  A +
Sbjct: 75  AAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVASKIHPMTIIAGYRMASECARN 134

Query: 284 H-LEHIAQKFDFGETNLEPLIQTCMTTLSSKIVNRCKRNLAEIAVKAVVAVADLERRDVN 343
             L+ +    D  E     L++  MTTL SKI+++ K + AE+AV AV  +    +   N
Sbjct: 135 ALLKRVIDNKDNAEKFRSDLLKIAMTTLCSKILSQDKEHFAEMAVDAVFRL----KGSTN 194

Query: 344 LDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKQIEDAKIAILTCPFEPPKPKT-KH 403
           L+ I++  K GG L+D+ L  G I+DK +   Q PK+IE+A I +     +  K K    
Sbjct: 195 LEAIQIIKKPGGSLKDSFLDEGFILDKKIGIGQ-PKRIENANILVANTAMDTDKVKIYGA 254

Query: 404 KVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQWGFDDEANHLLMHRNLPAVRW 463
           +V +DS+ K   +   E++   D V+K    G    + +    +    L     + A+  
Sbjct: 255 RVRVDSMTKVAEIEGAEKEKMKDKVKKIIGHGINCFVNRQLIYNFPEELFADAGILAIEH 314

Query: 464 VGGVELELIAIATGGRIVPRFQELTSEKLGKAGLVREKAFGTTKDRMLYIEHCANSRAVT 523
                +E + + TGG I   F    S KLG   L+ E   G  +D++++   C   +A +
Sbjct: 315 ADFEGIERLGLVTGGEIASTFDNPESVKLGHCKLIEEIMIG--EDKLIHFSGCEMGQACS 374

Query: 524 IFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGSAEISCSVAVEAAADKYPG-- 583
           I +RG +  +++E +RS+HDALCV    + +  ++ GGG  E+  +  V+  A K  G  
Sbjct: 375 IVLRGASHHVLDEAERSLHDALCVLSQTVNDTRVLLGGGWPEMVMAKEVDELARKTAGKK 434

Query: 584 -YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKENNPYCGIDCNDVGTNDMRKQ 643
            +AI AF+ AL ++P  +A+N+GL   E ++ ++++   E     GID       DM ++
Sbjct: 435 SHAIEAFSRALVAIPTTIADNAGLDSAELVAQLRAEHHTE-GCNAGIDVITGAVGDMEER 494

Query: 644 NVFETLIGKQQQVLLATQVVKMILKIDDVIS 668
            ++E    KQ  +L AT+  +MIL++D++I+
Sbjct: 495 GIYEAFKVKQAVLLSATEASEMILRVDEIIT 517

[Close]

BLAST of Cp4.1LG07g00180 vs. TAIR 10
Match: AT5G26360.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 271.2 bits (692), Expect = 2.3e-72
Identity = 176/528 (33.33%), Postives = 290/528 (54.92%), Query Frame = 0


Query: 150 PFIILKEQEQKTRLRGLDAQKANIASGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDG 209
           P ++L +  +  R  G      NI + KAVA I+RT+LGP+ M KML    G + +TNDG
Sbjct: 4   PVLVLSDSLK--RESGSKVHHGNIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTNDG 63

Query: 210 ATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGALLEQAERLLERGIHPIRVA 269
             IL ++DV +  AK M+ELSR+QD E+GDGTT V+V+AG +L  AE  LE+  HP  + 
Sbjct: 64  NAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFLEKNYHPTVIC 123

Query: 270 EGYELASRIAVDHLEHIAQKFDFGE-TNLEPLIQTCMTTLSSKIVNRCKRNLAEIAVKAV 329
             Y  A   ++  L+ IA   D  + + +  L+++C+ T   K  ++    +A++A+ A 
Sbjct: 124 RAYIKALEDSIAVLDKIAMSIDINDRSQVLGLVKSCIGT---KFTSQFGDLIADLAIDAT 183

Query: 330 VAV-ADLER--RDVNL-DLIKVEGKVGGKLEDTELVYGIIVDKDMSHP-QMPKQIEDAKI 389
             V  DL +  R+V++   IKVE   GG+ ED+E++ G++ +KD+  P +M ++I + +I
Sbjct: 184 TTVGVDLGQGLREVDIKKYIKVEKVPGGQFEDSEVLKGVMFNKDVVAPGKMKRKIVNPRI 243

Query: 390 AILTCPFEPPKPKTKHKVDIDSVEKFETLRQQEQKYFDDMVQKCKNVGATLVICQWGFDD 449
            +L CP E  K + +   ++   E +E L + E++Y +++  +       LVI + G  D
Sbjct: 244 ILLDCPLEYKKGENQTNAELVREEDWEVLLKLEEEYIENICVQILKFKPDLVITEKGLSD 303

Query: 450 EANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTSEKLGK-AGLVREKAFGTT 509
            A H      + A+R +   +   IA A G  IV R  EL    +G  AGL   K  G  
Sbjct: 304 LACHYFSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDIGTGAGLFEVKKIG-- 363

Query: 510 KDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGSAEI 569
            D   +I  C   +A T+ +RG +K  I E +R++ DA+ VARN+I+N  +V GGG+ E+
Sbjct: 364 DDFFSFIVDCKEPKACTVLLRGPSKDFINEVERNLQDAMSVARNIIKNPKLVPGGGATEL 423

Query: 570 SCSVAVEAAADKYPG---YAIRAFADALDSVPMALAENSGLQPIETLSAVKSQQIKENNP 629
           + S  ++  +    G   +   A A A +++P  LA+N G+  I T++A++ +     N 
Sbjct: 424 TVSATLKQKSATIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENA 483

Query: 630 YCGIDCNDVGTNDMRKQNVFETLIGKQQQVLLATQVVKMILKIDDVIS 668
           + GID N     DM++  ++++   K Q    A +   M+L+IDD++S
Sbjct: 484 WTGIDGNTGAIADMKESKIWDSYNVKAQTFKTAIEAACMLLRIDDIVS 524

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g00180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04450	6.7e-279	89.91	T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana OX=3702 GN=CCT5 PE=1...	[more]
P54411	2.8e-269	87.66	T-complex protein 1 subunit epsilon OS=Avena sativa OX=4498 PE=2 SV=1	[more]
P40412	1.4e-268	87.29	T-complex protein 1 subunit epsilon OS=Avena sativa OX=4498 PE=2 SV=1	[more]
P48643	7.6e-214	69.26	T-complex protein 1 subunit epsilon OS=Homo sapiens OX=9606 GN=CCT5 PE=1 SV=1	[more]
Q4R6V2	7.6e-214	69.26	T-complex protein 1 subunit epsilon OS=Macaca fascicularis OX=9541 GN=CCT5 PE=2 ...	[more]

BLAST of Cp4.1LG07g00180 vs. NCBI nr


Match Name	Identity	Description
XP_031263871.1	84.66	T-complex protein 1 subunit epsilon [Pistacia vera]	[more]
XP_023538326.1	99.44	T-complex protein 1 subunit epsilon-like [Cucurbita pepo subsp. pepo]	[more]
XP_022951552.1	99.25	T-complex protein 1 subunit epsilon-like [Cucurbita moschata]	[more]
XP_023001984.1	98.88	T-complex protein 1 subunit epsilon [Cucurbita maxima]	[more]
KAG6585190.1	99.07	T-complex protein 1 subunit epsilon, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of Cp4.1LG07g00180 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1GI10	99.25	CCT-epsilon OS=Cucurbita moschata OX=3662 GN=LOC111454330 PE=3 SV=1	[more]
A0A6J1KP56	98.88	CCT-epsilon OS=Cucurbita maxima OX=3661 GN=LOC111496003 PE=3 SV=1	[more]
A0A0A0LNE6	97.01	CCT-epsilon OS=Cucumis sativus OX=3659 GN=Csa_2G350200 PE=3 SV=1	[more]
A0A6J1HF21	96.07	CCT-epsilon OS=Cucurbita moschata OX=3662 GN=LOC111462873 PE=3 SV=1	[more]
A0A6J1BQJ9	96.07	CCT-epsilon OS=Momordica charantia OX=3673 GN=LOC111004839 PE=3 SV=1	[more]

BLAST of Cp4.1LG07g00180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24510.1	4.8e-280	89.91	TCP-1/cpn60 chaperonin family protein	[more]
AT1G24510.2	3.1e-239	89.98	TCP-1/cpn60 chaperonin family protein	[more]
AT3G18190.1	2.1e-81	35.74	TCP-1/cpn60 chaperonin family protein	[more]
AT5G20890.1	6.0e-73	33.86	TCP-1/cpn60 chaperonin family protein	[more]
AT5G26360.1	2.3e-72	33.33	TCP-1/cpn60 chaperonin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PRINTS	PR00304	TCOMPLEXTCP1	coord: 233..252 score: 47.94 coord: 203..221 score: 37.32 coord: 519..541 score: 34.6 coord: 553..565 score: 46.33 coord: 181..197 score: 42.23
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PANTHER	PTHR11353	CHAPERONIN	coord: 144..668
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PANTHER	PTHR11353	CHAPERONIN	coord: 26..134
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 177..666 e-value: 4.4E-171 score: 572.0
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 18..147 e-value: 8.2E-36 score: 125.5
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 27..110
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 160..668
IPR027409	GroEL-like apical domain superfamily	GENE3D	3.50.7.10	GroEL	coord: 361..515 e-value: 4.4E-171 score: 572.0
IPR027409	GroEL-like apical domain superfamily	SUPERFAMILY	52029	GroEL apical domain-like	coord: 356..524
IPR012718	T-complex protein 1, epsilon subunit	TIGRFAM	TIGR02343	TIGR02343	coord: 142..668 e-value: 7.9E-294 score: 973.2
IPR012718	T-complex protein 1, epsilon subunit	CDD	cd03339	TCP1_epsilon	coord: 145..667 e-value: 0.0 score: 1044.96
IPR002423	Chaperonin Cpn60/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 179..668 e-value: 7.6E-152 score: 506.4 coord: 25..139 e-value: 6.7E-32 score: 110.8
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	GENE3D	3.30.260.10		coord: 289..551 e-value: 4.4E-171 score: 572.0
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	SUPERFAMILY	54849	GroEL-intermediate domain like	coord: 295..551
None	No IPR available	PANTHER	PTHR11353:SF198	BNAA08G19100D PROTEIN	coord: 144..668
None	No IPR available	PANTHER	PTHR11353:SF198	BNAA08G19100D PROTEIN	coord: 26..134
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00995	TCP1_3	coord: 53..61
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00750	TCP1_1	coord: 184..196
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00995	TCP1_3	coord: 233..241
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00751	TCP1_2	coord: 205..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g00180.1	Cp4.1LG07g00180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005832	chaperonin-containing T-complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0051082	unfolded protein binding