Cp4.1LG06g09390 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g09390
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	DEAD-box ATP-dependent RNA helicase
Location	Cp4.1LG06: 7556147 .. 7563498 (+)
RNA-Seq Expression	Cp4.1LG06g09390
Synteny	Cp4.1LG06g09390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCTCAACCTGTCGCGCCCACTGATTCGAGCATGTGAGGCTTTGGGATATGCAAAGCCGACGCCAATTCAGGTTCTTTTTCTATGATTTTTGTTTTTATTTTATTTATTTTATAGTATTGAATTTTATGTTCTTACTAATCTTGTTGGGTAGGCGGCTTGCATACCGTTGGCATTGACTGGACGTGATATATGTGGAAGTGCAATTACTGGTTCTGGAAAGGTATGGGTTTATCTTGAGCTTTCTTTGTAGTTAACTGTTACGAGAATTAGAGTTGTTGGAATAGGATGGTAGTTCTTGCTTTCGGGGAATTTGTTTTATGAACTATTGCAGAAATTCTATAAGCTGGACGACTACATAATGATTTGGAAAAGATGTGTGAAAGCCCTAGGATTGCTTTTAATCTTACCTTGTTCTCACAGACTGCAGCTTTTTCGCTACCTACTTTGGAGAGGTTACTCTATCGGCCCAAACGTGATCGTGCGATAAGAGTTTTAGTCCTAACTCCAGCTAGAGAATTGGCAATCCAGTAAGTATGTTTTTAAAGATACGTATTCTTTATCATGTGTTTTCATATAATCAACCAATTTAGATGTCAGTTAAAATTCAGTCTACATATATATATCTTGAGGGAAAGTTGTTGGATAGCTTTTTAATGAAGTGCCCAGTTTTAGTTCTTGCACGTCCATCACCTTGATAAAACATGGTCTCATTTTTTCTTGCAAAATGCAAATTTGATGCTGTCATTTATGGTTTCCATAATAAATGACAACTGAAAAACTATATTTCGATATTGATATAAATATTTGGTGGTATTCTCTGAGAATTCTGTTCTAGGCTATATTGGCTAGGCGACCATATTTTAAAATACAAGACAAATATCTTGTGGCTCAATGCTTGCTTAGGCTATGTTGTAGGAAATATCACTTGAAAGATATTGAAGAAGCTTTTAAGGGCTAGATTCTGATTGGTTAAGAAGCTTTAAAGGGTTAGAATGAATTCATGGAAGTCTCTAGAGTAATGGAGAAAGGTTTGGATGCAGGATAAAATAAAACTGATTTCAGGAAGTTGTGGAAAAAGAAAGAGAGGAAATGGCATAGGAAGTAAGAAGAGACAAAGATGAGAGAGATAATAATATTAAGAAGTGTGAAATAGTGTGGTGTATCAAGATAAGTTGGAAAAAAATATTAGAGGAAAAGGCAAAAGAAAGAGTGGTTTGAAGGAAAAAAAACAAAGTAGGAGGTAAAGAAAAGGGAGAAAAAGAGAACGAAGGGGACTGTTGTTGAAAAAGAAGAAGAAAAGTTGGTGGAAAAATGAGTGTGTGTGTGAAAGATGAAAGATGAAAGAGTGAAAAATATAGAGGTTGTAATCTCTCAGATTCACGACATCCACCTGTTTTGGGTTCAAGGCGTTCCCATATTTTTACCATGTTTCTTGGTTTTTCTTTTCAATCTCAATTGTAGTGTTGGAGTTTTTTTTGGAAGAGATTATTTAAATGTGGGAGATAAGAAAGAATCAGTGAACTAAAAAGAATAGCAATGGAAAAAGGATCCCTTAAATCAACTTTTTGTCTCCCTACGCTTGAGTGAAGCAATCAGATTTGTTGCATTGAGGTGCTAGCACTTTTAAAAAACTCTTTTTTTAGTTCAGGGCTTTTTTTGGTCATTGGAGTGGAGATTTGTGATTCAAGCGACATTATTATTGTTTTCCTTTTGTCACAAACAATGTTACAAAAAACTCCTGGTTTGGAGAATATTAAAGCAGCCCTAAAGAACCTTCCAAAAGATAATAAAATCTCTCTCCCCCCCCCAAAACTGAAAGACAAAACCCGAAAAACTATTCACCTAGATTTTGAAAACTATATAAAACCCCCGCTGAGGACATGCACATTGTAACACCACATTATGAACCTCTGACCACCCTTTGGAGAAGCTAAAGAAAGGGTAAGTCTAATATGAAGCCCTAAAAGAACTCCAATCGGAAGCATGTGCCTCACTAACTTCATGATAAGCCTCAATCAATAAGAACATGGTTTGAGAGATTCTACAACCCATATTTTATACCTAAAGCATGGCCCACTTCTCCCAAGGGCAGAAGAGTTGCAATATTATCGTCTTTGACCACCTAATGTCTCCTTGTATAAAAGCTATATTTTATTTAGTGCCCAATTAGACACAAAACAAAAGCTGAGCATGCTTTGAAAGATCTATTTTGTACACGTATTCCTCCTCTACATTTTCATGTTAATACTAACTGAAAATAAGGAAATTTTGCTGTTTTTTTCCTCCAGAGTTCACAGTATGATAGAGAAACTTGCTCAGTTTACTGATATCAGATGTTGCCTGATCGTTGGTGGGCTTTCAAGAAAGGTATGACCTAGTGTACTTTGGTGACTAAAGAAGAAGTTTGAAATTTCTACATATATAACATTTACTGGGATTCTAATTCTATATTGTAATTTTGTTTTAAAAAATTCGTTATGTATTCCTTTACATGATATATCACGGTCCTGTTTCATCATAATGTGAGGTTTTAGTGAAGAATCAAAATTCATTACTACAGGGGTTTTGACTCATTTTTCCACGAAGTATGGTTGATTTTGCTCTCCTTTCTTTGGTTAAGGATATTTTATTTTCTTAATTTTGTTCAGGAGCAAGAGGCTGCCTTAAGATCGATGCCTGATGTGGTTGTGGCCACTCCAGGACGCATGATCGATCATCTACGCAATTCCATGTCCGTAGACTTGGACGATTTAGCAGTTTTAATACTTGATGAGGCAGATCGTCTTTTGGAACTTGGATTTAGTGCCGAAATTCGTGAATTGGTATATTTTGGCCTCTATTGTGCAATTTTAATGACGGAGATTGTGTTCTTTGATACATCTATTTTTAGGTTTTGGTATAAAGAGTTATTAATTTTCTTTAAAGGTTCGTCTTTGCCCAAAAAGGAGGCAGACAATGTTGTTTTCTGCTACCATGACAGAAGAAATTGATGAGCTTATCAAGCTTTCCTTGACTAAACCATTGCGCCTCTCAGCTGACCCAGCTACCAAGAGGCCAAAAACATTGACAGAAGAGTAATTTCCAACTTGATTTCTCCTCTAAAATTTGTTTATTAATTTATAAGCATATCTTAACCTGAGAGCATCTTATCTGCCGGATGATTTTTTAGTTATCAAGAATGTGTATTCCGCTTGCAGGGTGGTCAGGTTACGTAGAATGCGTGAAGTAAATCAGGAAGCTGTCCTCCTTGCTCTGTGCTCAAAGACATTTACTTCTAAAGCTATTATATTTAGGTATTAGAAACAAAAAGTTCGCGAGCAACTTTGTTTTTGGATCCTTTTAATTGGAGGGTTGCATCTAATTGTTTTACTAAGTCACGTATCTGACAGAGGTCCATTTTCCAGACTTAAAAGCAATCATCCTCTAGATCGAAACTGAGTCTAGTTAATTTAATGTTTTATTATTTTGTTTTCTGTATAACTAGTGAATTTTAACTTCATCATTCTTTTTGGTTGACCTGTAGTGGAACCAAACAGGCTGCTCATAGACTAAAGATTTTATTTGGATTAGCTGGCTTTAAAGCTGCTGAGCTTCATGGAAATCTTACCCAAGTTCAGCGTCTTGATGTGAGTGATTGCTTGTTAACATGTTTAAGGTTGGAATCATTAAATCATCCCCTTAGTTTTCCCCTCTGTATGCTGATCATTATTTTGATTTTTTTATGTAGGCTTTGGAACTCTTCAGGAAACAGCAAGTTGATTATCTTATTGCTACTGATGTGGCTGCTCGGGTGAGAACTCATTTTTAATGTTGTTTCTCGTCCTGTAGATATACAATATAGTTGAGAAAAAATCAGCTACATTAGTTTTACTGATATGTTTTCGTGCAATTTATGCTTTGGTTGAAATGTTGTGTAGGGCCTGGATATTATTGGTGTTCAAACTGTTATAAACTTTGCCTGTCCTCGTGATCTTACCAGGTAGGTATTGGGTTCTGGATTGTGTTATTTGTCACCGCGCAACCATATTTACTATTATTGGCATCGCATTCTTATTTTCTCTTCAATGGAGTATTCACTTTTTATTTTGTTTTACACTGCATTTATGTATCTTTCATCTTCGTTGAATGTTTCTCATAAAAAAATAATAAAAAAGAACGTACTCATCTGTTTTCTTTTTCTTTTATTCTTTCTGGAGCAATGAGTGGCTTTCTAAAACCCTTGGTTTGGAAATTCTGCATATGATTTGTGCCAATGATTCTTGTTGACTTCCAAGCATTCTTATGCTGAAAGGAATGCCTGTGATTTTTCCCCATAATACTTACCCTTCATTTCCTTTCCCTCTTCAAATATCTTTTTAATTTCATATTTTCTTTGGAAATTATGTTTTTTTATTTTTATTTTTAATTACAACACTATTTTAGAAATGTTGAAATTTAAACTTTTCCTTTAGTATTCTATGCATCGAAGTGCTGTAATGTCACAAGTACAACATTCCCAATCATGTTTTGACACTTGTTTCTTTCATTCCGACTTCTCATTCTTATCTACCTTATTTTTTAGGCATCTTTTATGAAAATTTCATGACTCCTTGAATCAAATAACCCCTTGTAAATTTATATTAAGGCATGCATCAACCATTTTTATATTTATTATATTTGANATTCCGACTTCTCATTCTTATCTACCTTATTTTTTAGGCATCTTTTATGAAAATTTCATGACTCTTTAAGGCATGCATCAACCATTTTTATATTTATTATATTTGATTAATGGAGTTGATTATGTTCTTAACTTTCATGTTTTTGTAGCTATGTTCATCGAGTGGGTCGTACTGCAAGAGCTGGTAGAGAAGGATATGCTGTTACCTTTGTGACTGACAATGACCGTTCTCTTTTAAAAGCCATAGTGAGTGACTACCAATTCATTTGGAATAGAAAATAAAAAATCGAAAGTTACAGCCTTTTATAAGAAATCTTTTGGGACATGAGGGGTTGTTCATTTTATGCTGTCTGGAATCTGTTTACAAGGGGTTGTTTCTTATGAATTCGGGTTGGAATTTGTGGCCTGGTTTTTGTCGGACATTTAAGGCCTTCTTTCATTGTTCTTCATACAAGTCTTGTTTATTCTGAATTAATAGTGGGTCTTGACTTCAAATGACAGGCTAAGAGAGCTGGTTCCAAGTTGAAGAGCAGAATTGTTGCTGAGCAATCCATAAAAAAGTGGTCTGAAATGATTGAAGGAATGGAAGATCAAGTGAATATGATTCTTCGGGAAGAGAGGTTTTATCTGGTTTCTCTTCTTGTTTGTCCAATTCCCTTTCATTCTAGTCTTAATTTAATTTTTTTTGTAGAGAAGAGAGAGCTCTAAGGAAAGCTGAAATGGAAGCAACAAAGGTATTAGTCTTCATACTTATCTCTCTTTCATCTTTAAGTTGCATCATGAGTTGGCAGTTTTTACATCACATACCCTCTACTTTTACTGGAAATTTTAATCAACTCTGGTTAATATTTGCTCTTTCTTTGTGTACTCAGGCAGAAAACATGATTGTTCATCAGGAAGAGATTTTTTCACGCCCTAAAAAAACCTGGTTTATAACGGACAAGGAGAAAAAGCTTGTGGCAAAAGCAGCCAAGGTAAGTACTTGTTGCTGTATATGCTAGAAAAATCTAATGTTTGCAACAAAGGTTGGAAGTTTCCTGATTATGTGATGTGGACTTGGGGCTCTTAAGCTTCAGCTTTCCTTTATGATAATCTGTTTCCTTGTCTGAAACATGTCTTGTTATACATGCAGTGTTTCAAGTTAGCTCAATTTCTTTCCATGATTTTCCTCAAATGAAACATCGTGCTTTGCAAGAGCCTATGTTTTGACGTTTTCAACTTTTACTTCTGTTGAAAGAGGAGGAGTTGCTCTCCTTGTCAAAGCCAAAAACTTATTTGTTTTATTTTCTTTGAAATTGTTGAAATGTTAAATTACTTGAGCACTAGATTCTTTGCCTGTTTCTAAATTTTAGTATGAAACATGGTCTGTTCATCAGATAATTGTGCTCTTTCTATCTTTTCCTCTCAACTAGACATCTCTGGAAAAAGGAAAGACGTCTGGGAACGAAGTCGTAAGTGCACAACATGCCGAAGACCTTAAGATGAAAGAAAAAAGGAAGCGCGAGCGTGAGGTGCCCGAACATTGCATGAACTAGAACATTCTTTATATATTTTGAAGTTGTCAAGTTTAAAGTAATGACCCTAAATGGTACTTTTGATGATATCTATGATTCGAGCAGAAAAATTTGCCGAGGAAGAAGCGTAGGAAATTGGAAGCAGCTAGAGAAATGTTGGAGGAGGAGAAGCAAAATGGCAAAACAGGAGTATGACTTTTCCTATTTCATCCATTGTCACGTTTAAATAGTTTACTTCTTATCCATGCGATATTATATATCAAGCAATGAAGTAAAAAGATCAAGTTACCCTACAAGTGCCCCTATCATTTGTGGTTTATCACACAATTACAATAACTGCAGGGTGGGGGAGAAAATAAGAAAGACAAATCTGGATTGTCGCTCGTGAAACTTGCATACCGTCGAGCAAAAGCAGTAAAGGCTGTGAACAAGGCGCTTGACTCGGGCAAGATTGTGAAGCAAAACCAGAAAACTAAGAAGTCTTCCCACAGAACTCAATCAAGATCCGAGGAGATGCGAGAGATGTTCCAAAATGATATGAGCGAGCAGAAGCAGAAACGACATGGCAGTGGCGGTGCTGGGATGAAAAAGTCTAAGCATTCCTTCAAAAGCAAGTCAAGGTACAAACCACTAATAAAACTTTTATTCAACCTTCTTCATGATAATAAGGGCGTGTAAATTAATGTTGTGGATGCTTTTGAATGTGTTCTTTTAGGTACAAGCGTAAATAGAAACTCTACTTGGATGTCGATTGGCCTTGTGTTTGCACGGGAACGGTGGCAACGTTAAGTTTGCTATCTGCATTCCTTGCACCAGTTTTGATGGCAGATGGGGTGGTTGTATATTTCTTTCCCTCAAAGTTGATTGCTCTCGGTCGGTTGTGACGTGCGTCGAGAGTCGAAATGCACCATCAACCTGCTGAAGCATAACCTAGTAACACAAATTTGATTTATAGAGATTTGTTGTACCATGAGAAGGAAAACAACTGGAATGAATGGTTATTAGTTTTTCAAATTTTTAGGCTGCCTAGTTCGAATTATTTATTTCATGATTATGCATCATCTCATTGAACTATGATTTTTATTTTGAGATTTCGTGCATGTTGTATGTCGTATGATTATGAATTAGTTCTCTAACATGTTATGAATGAATACATATACTTCGATATTATTC

mRNA sequence

ATGGAGCTCAACCTGTCGCGCCCACTGATTCGAGCATGTGAGGCTTTGGGATATGCAAAGCCGACGCCAATTCAGGCGGCTTGCATACCGTTGGCATTGACTGGACGTGATATATGTGGAAGTGCAATTACTGGTTCTGGAAAGACTGCAGCTTTTTCGCTACCTACTTTGGAGAGGTTACTCTATCGGCCCAAACGTGATCGTGCGATAAGAGTTTTAGTCCTAACTCCAGCTAGAGAATTGGCAATCCAAGTTCACAGTATGATAGAGAAACTTGCTCAGTTTACTGATATCAGATGTTGCCTGATCGTTGGTGGGCTTTCAAGAAAGGAGCAAGAGGCTGCCTTAAGATCGATGCCTGATGTGGTTGTGGCCACTCCAGGACGCATGATCGATCATCTACGCAATTCCATGTCCGTAGACTTGGACGATTTAGCAGTTTTAATACTTGATGAGGCAGATCGTCTTTTGGAACTTGGATTTAGTGCCGAAATTCGTGAATTGGTTCGTCTTTGCCCAAAAAGGAGGCAGACAATGTTGTTTTCTGCTACCATGACAGAAGAAATTGATGAGCTTATCAAGCTTTCCTTGACTAAACCATTGCGCCTCTCAGCTGACCCAGCTACCAAGAGGCCAAAAACATTGACAGAAGAGGTGGTCAGGTTACGTAGAATGCGTGAAGTAAATCAGGAAGCTGTCCTCCTTGCTCTGTGCTCAAAGACATTTACTTCTAAAGCTATTATATTTAGTGGAACCAAACAGGCTGCTCATAGACTAAAGATTTTATTTGGATTAGCTGGCTTTAAAGCTGCTGAGCTTCATGGAAATCTTACCCAAGTTCAGCGTCTTGATGCTTTGGAACTCTTCAGGAAACAGCAAGTTGATTATCTTATTGCTACTGATGTGGCTGCTCGGGGCCTGGATATTATTGGTGTTCAAACTGTTATAAACTTTGCCTGTCCTCGTGATCTTACCAGCTATGTTCATCGAGTGGGTCGTACTGCAAGAGCTGGTAGAGAAGGATATGCTGTTACCTTTGTGACTGACAATGACCGTTCTCTTTTAAAAGCCATAGCTAAGAGAGCTGGTTCCAAGTTGAAGAGCAGAATTGTTGCTGAGCAATCCATAAAAAAGTGGTCTGAAATGATTGAAGGAATGGAAGATCAAGTGAATATGATTCTTCGGGAAGAGAGAGAAGAGAGAGCTCTAAGGAAAGCTGAAATGGAAGCAACAAAGGCAGAAAACATGATTGTTCATCAGGAAGAGATTTTTTCACGCCCTAAAAAAACCTGGTTTATAACGGACAAGGAGAAAAAGCTTGTGGCAAAAGCAGCCAAGACATCTCTGGAAAAAGGAAAGACGTCTGGGAACGAAGTCGTAAGTGCACAACATGCCGAAGACCTTAAGATGAAAGAAAAAAGGAAGCGCGAGCGTGAGAAAAATTTGCCGAGGAAGAAGCGTAGGAAATTGGAAGCAGCTAGAGAAATGTTGGAGGAGGAGAAGCAAAATGGCAAAACAGGAGGTGGGGGAGAAAATAAGAAAGACAAATCTGGATTGTCGCTCGTGAAACTTGCATACCGTCGAGCAAAAGCAGTAAAGGCTGTGAACAAGGCGCTTGACTCGGGCAAGATTGTGAAGCAAAACCAGAAAACTAAGAAGTCTTCCCACAGAACTCAATCAAGATCCGAGGAGATGCGAGAGATGTTCCAAAATGATATGAGCGAGCAGAAGCAGAAACGACATGGCAGTGGCGGTGCTGGGATGAAAAAGTCTAAGCATTCCTTCAAAAGCAAGTCAAGGTACAAGCGTAAATAGAAACTCTACTTGGATGTCGATTGGCCTTGTGTTTGCACGGGAACGGTGGCAACGTTAAGTTTGCTATCTGCATTCCTTGCACCAGTTTTGATGGCAGATGGGGTGGTTGTATATTTCTTTCCCTCAAAGTTGATTGCTCTCGGTCGGTTGTGACGTGCGTCGAGAGTCGAAATGCACCATCAACCTGCTGAAGCATAACCTAGTAACACAAATTTGATTTATAGAGATTTGTTGTACCATGAGAAGGAAAACAACTGGAATGAATGGTTATTAGTTTTTCAAATTTTTAGGCTGCCTAGTTCGAATTATTTATTTCATGATTATGCATCATCTCATTGAACTATGATTTTTATTTTGAGATTTCGTGCATGTTGTATGTCGTATGATTATGAATTAGTTCTCTAACATGTTATGAATGAATACATATACTTCGATATTATTC

Coding sequence (CDS)

ATGGAGCTCAACCTGTCGCGCCCACTGATTCGAGCATGTGAGGCTTTGGGATATGCAAAGCCGACGCCAATTCAGGCGGCTTGCATACCGTTGGCATTGACTGGACGTGATATATGTGGAAGTGCAATTACTGGTTCTGGAAAGACTGCAGCTTTTTCGCTACCTACTTTGGAGAGGTTACTCTATCGGCCCAAACGTGATCGTGCGATAAGAGTTTTAGTCCTAACTCCAGCTAGAGAATTGGCAATCCAAGTTCACAGTATGATAGAGAAACTTGCTCAGTTTACTGATATCAGATGTTGCCTGATCGTTGGTGGGCTTTCAAGAAAGGAGCAAGAGGCTGCCTTAAGATCGATGCCTGATGTGGTTGTGGCCACTCCAGGACGCATGATCGATCATCTACGCAATTCCATGTCCGTAGACTTGGACGATTTAGCAGTTTTAATACTTGATGAGGCAGATCGTCTTTTGGAACTTGGATTTAGTGCCGAAATTCGTGAATTGGTTCGTCTTTGCCCAAAAAGGAGGCAGACAATGTTGTTTTCTGCTACCATGACAGAAGAAATTGATGAGCTTATCAAGCTTTCCTTGACTAAACCATTGCGCCTCTCAGCTGACCCAGCTACCAAGAGGCCAAAAACATTGACAGAAGAGGTGGTCAGGTTACGTAGAATGCGTGAAGTAAATCAGGAAGCTGTCCTCCTTGCTCTGTGCTCAAAGACATTTACTTCTAAAGCTATTATATTTAGTGGAACCAAACAGGCTGCTCATAGACTAAAGATTTTATTTGGATTAGCTGGCTTTAAAGCTGCTGAGCTTCATGGAAATCTTACCCAAGTTCAGCGTCTTGATGCTTTGGAACTCTTCAGGAAACAGCAAGTTGATTATCTTATTGCTACTGATGTGGCTGCTCGGGGCCTGGATATTATTGGTGTTCAAACTGTTATAAACTTTGCCTGTCCTCGTGATCTTACCAGCTATGTTCATCGAGTGGGTCGTACTGCAAGAGCTGGTAGAGAAGGATATGCTGTTACCTTTGTGACTGACAATGACCGTTCTCTTTTAAAAGCCATAGCTAAGAGAGCTGGTTCCAAGTTGAAGAGCAGAATTGTTGCTGAGCAATCCATAAAAAAGTGGTCTGAAATGATTGAAGGAATGGAAGATCAAGTGAATATGATTCTTCGGGAAGAGAGAGAAGAGAGAGCTCTAAGGAAAGCTGAAATGGAAGCAACAAAGGCAGAAAACATGATTGTTCATCAGGAAGAGATTTTTTCACGCCCTAAAAAAACCTGGTTTATAACGGACAAGGAGAAAAAGCTTGTGGCAAAAGCAGCCAAGACATCTCTGGAAAAAGGAAAGACGTCTGGGAACGAAGTCGTAAGTGCACAACATGCCGAAGACCTTAAGATGAAAGAAAAAAGGAAGCGCGAGCGTGAGAAAAATTTGCCGAGGAAGAAGCGTAGGAAATTGGAAGCAGCTAGAGAAATGTTGGAGGAGGAGAAGCAAAATGGCAAAACAGGAGGTGGGGGAGAAAATAAGAAAGACAAATCTGGATTGTCGCTCGTGAAACTTGCATACCGTCGAGCAAAAGCAGTAAAGGCTGTGAACAAGGCGCTTGACTCGGGCAAGATTGTGAAGCAAAACCAGAAAACTAAGAAGTCTTCCCACAGAACTCAATCAAGATCCGAGGAGATGCGAGAGATGTTCCAAAATGATATGAGCGAGCAGAAGCAGAAACGACATGGCAGTGGCGGTGCTGGGATGAAAAAGTCTAAGCATTCCTTCAAAAGCAAGTCAAGGTACAAGCGTAAATAG

Protein sequence

MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLLYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTMLFSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSKTFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQEEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREKNLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALDSGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKSRYKRK

Homology

[Close]

BLAST of Cp4.1LG06g09390 vs. ExPASy Swiss-Prot
Match: Q9ZRZ8 (DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana OX=3702 GN=RH28 PE=2 SV=1)

HSP 1 Score: 822.4 bits (2123), Expect = 3.4e-237
Identity = 456/622 (73.31%), Postives = 525/622 (84.41%), Query Frame = 0


Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPL+RACE LGY KPTPIQAACIPLALTGRD+C SAITGSGKTAAF+LPTLERL
Sbjct: 170 MELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERL 229

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           L+RPKR  A RVL+LTP RELA+Q+HSMI+ LAQFTDI+C LIVGGLS +EQE  LRSMP
Sbjct: 230 LFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSMP 289

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           D+VVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLL+ GF+ EI ELVRLCPKRRQTML
Sbjct: 290 DIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTML 349

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEE+ EL+KLSL KPLRLSADP+ +RP  LTEEVVR+RR RE NQEAVLL+LC++
Sbjct: 350 FSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTR 409

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TF SK IIFSGTKQAAHRLKILFGLAG KAAELHGNLTQ QRLD+LELFRKQ+VD+LIAT
Sbjct: 410 TFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIAT 469

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVIN+ACPR++ SYVHRVGRTARAGREGYAVTFVTD+DRSLLK IAK
Sbjct: 470 DVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLKVIAK 529

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           + GSKLKSR++ EQSI KWS++I+ MEDQ + ++  ER+ERALRKAEME  KAENM+ H+
Sbjct: 530 KVGSKLKSRVIPEQSIVKWSQIIDEMEDQYSAVISAERDERALRKAEMEFAKAENMLEHR 589

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           +EI++RPK+TWF+T+KEKKLVA+A K S   G  +G E+VSA  AEDLKMKEKRKREREK
Sbjct: 590 DEIYARPKRTWFMTEKEKKLVAQAEKDS--AGNPAGGELVSADRAEDLKMKEKRKREREK 649

Query: 481 NLPRKKRRKLEAAREML-------EEEKQNGKTGGG---GENKK----DKSGLSLVKLAY 540
           NLPRKKRRKLEAAREML       EEE + G    G   G++KK    DK GL+L  L Y
Sbjct: 650 NLPRKKRRKLEAAREMLEDNEGEEEEEDEEGDEKRGRSRGKDKKKQETDKKGLTLKDLGY 709

Query: 541 RRAKAVKAVNKALDSGKI--VKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSG 600
            RAKAVKA  +A+DSGK+   K ++K  +S  R Q R EEM+++F++DM E+KQ R G+ 
Sbjct: 710 MRAKAVKAKQRAIDSGKMERPKPDKKQSRSKPRNQPRGEEMKDLFKSDMGEKKQGRGGAA 769

Query: 601 GAG--MKKSKHSFKSKSRYKRK 605
            A     KSK+SFKSK+RYKR+
Sbjct: 770 AAAKPRTKSKNSFKSKARYKRR 789

[Close]

BLAST of Cp4.1LG06g09390 vs. ExPASy Swiss-Prot
Match: Q0INC5 (DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0481100 PE=2 SV=2)

HSP 1 Score: 817.8 bits (2111), Expect = 8.3e-236
Identity = 449/608 (73.85%), Postives = 524/608 (86.18%), Query Frame = 0


Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           +ELNLSRPL+RACEALGY KPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLP LERL
Sbjct: 197 LELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLERL 256

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           L+RPKR  AIRVL+LTP RELA QVHSMIEKLAQFTDIRCCLIVGGLS K QE ALRSMP
Sbjct: 257 LFRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMP 316

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           D+VVATPGR+IDHLRNS+SV L+DLA+LILDEADRLLELGFSAEI+EL+R+CP+RRQTML
Sbjct: 317 DIVVATPGRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSAEIQELIRMCPRRRQTML 376

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEEI+EL+ LSL KP+RL ADP+ KRP TLTEEVVR+RR RE NQEAVLLALC K
Sbjct: 377 FSATMTEEINELVTLSLNKPVRLEADPSLKRPATLTEEVVRIRRAREANQEAVLLALCLK 436

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TF  K IIFSGTK +AHRLKI+FGL+G KAAELHGNLTQ QRL+ALELF+KQ+VD+LIAT
Sbjct: 437 TFKDKVIIFSGTKHSAHRLKIIFGLSGMKAAELHGNLTQAQRLEALELFKKQEVDFLIAT 496

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARG+DI+GV+TVINF+CPRD  +Y+HRVGRTARAGREGYAVTFVTD+DRSLLKAIAK
Sbjct: 497 DVAARGIDIVGVRTVINFSCPRDARTYLHRVGRTARAGREGYAVTFVTDDDRSLLKAIAK 556

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           +AGS+LKSRIVAE+ + + +++IE +EDQ++ I++EEREER LRKAEMEATKAENMI H+
Sbjct: 557 KAGSQLKSRIVAEKPVAECAKLIEELEDQISTIIQEEREERILRKAEMEATKAENMIAHK 616

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           +EI+SRPK+TWF T+KEKKL+AKAAK S  +GK S + V+SAQ AEDL++KEK++REREK
Sbjct: 617 DEIYSRPKRTWFATEKEKKLLAKAAKESTSQGK-SNSGVISAQQAEDLRLKEKKRREREK 676

Query: 481 NLPRKKRRKLEAAREMLE---EEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNK 540
           NLPRKKRR+LEA REMLE   E+++  K   GG  KK+K G SLV +AYRRAK++KA  K
Sbjct: 677 NLPRKKRRRLEAEREMLEDESEDEEEAKESKGG--KKEKKGQSLVDVAYRRAKSMKASGK 736

Query: 541 ALDSGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRH-GSGGAGMKKSKHSFK 600
                   K ++K K+ S +  +R EEM+E+FQNDMSE KQ R         KKSK+SFK
Sbjct: 737 RGAGTGKGKNDKKAKQHSGKGPTRQEEMQELFQNDMSEWKQGRSLKKNNVMRKKSKNSFK 796

Query: 601 SKSRYKRK 605
           SKSRY R+
Sbjct: 797 SKSRYNRR 801

[Close]

BLAST of Cp4.1LG06g09390 vs. ExPASy Swiss-Prot
Match: A4QYM6 (ATP-dependent RNA helicase DRS1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DRS1 PE=3 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 1.2e-125
Identity = 255/524 (48.66%), Postives = 347/524 (66.22%), Query Frame = 0


Query: 3   LNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLLY 62
           ++LSRP++R   ++G+AKPTPIQ+  IP+AL G+D+ G A+TGSGKTAAF +P LERLLY
Sbjct: 260 MSLSRPILRGLTSVGFAKPTPIQSKTIPIALMGKDVVGGAVTGSGKTAAFVVPILERLLY 319

Query: 63  RPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMPDV 122
           RPK+    RV++L P RELAIQ H++  KLA  TDI+ CL VGGLS K QE+ LR  PDV
Sbjct: 320 RPKKVPTSRVVILAPTRELAIQCHAVATKLASHTDIKFCLAVGGLSLKVQESELRLRPDV 379

Query: 123 VVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTMLFS 182
           ++ATPGR IDH+RNS S  +D + +L+LDEADR+LE GF+ E+ E++   PK RQTMLFS
Sbjct: 380 IIATPGRFIDHMRNSASFAVDTVEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFS 439

Query: 183 ATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSKTF 242
           ATMT  +D LI++ L KP+RL  D   K   TLT+E VRLR  RE  +   L+ LC   +
Sbjct: 440 ATMTSSVDNLIRVGLNKPVRLMVDSQKKTVVTLTQEFVRLRPGREEKRMGYLVYLCKNLY 499

Query: 243 TSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIATDV 302
           T + IIF   K+ AH  +I+FGL G   AELHG+++Q+QR+ ++E FR  +V +L+ATD+
Sbjct: 500 TERVIIFFRQKKIAHHARIIFGLLGLSCAELHGSMSQIQRIQSVEAFRDGKVSFLLATDL 559

Query: 303 AARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRA 362
           A+RGLDI GV TVIN+  P+ L  YVHRVGRTARAGR G A+T   + DR ++KA  K  
Sbjct: 560 ASRGLDIKGVDTVINYEAPQSLEIYVHRVGRTARAGRSGTAITLAAEPDRKVVKAAVKAG 619

Query: 363 ---GSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVH 422
              G+K+ SRI+       W   I+ +ED+V  ++REE+EE+ L +A+ME  K ENMI +
Sbjct: 620 KAQGAKISSRIIDAADADSWQAKIDELEDEVEAVMREEKEEKVLAQADMEMRKGENMIRY 679

Query: 423 QEEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKRERE 482
           +++I +RPK+TWF T+K+KK   +A + +L       N V  A           +K+   
Sbjct: 680 EDDIKARPKRTWFETEKDKKAAREAGRAAL-------NGVREA----------LKKKHGG 739

Query: 483 KNLPRKKRRKLEAAREMLEE---EKQNGKTGGGG---ENKKDKS 518
           KNL  K ++KL+A  E  E    +K   +  G G     KKDKS
Sbjct: 740 KNLSNKDKKKLDAMAEAKEARVWKKGAAERAGKGAVLNFKKDKS 766

[Close]

BLAST of Cp4.1LG06g09390 vs. ExPASy Swiss-Prot
Match: P0C2N8 (ATP-dependent RNA helicase drs1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=drh-11 PE=3 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 2.0e-125
Identity = 257/545 (47.16%), Postives = 355/545 (65.14%), Query Frame = 0


Query: 2   ELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLL 61
           E++LSRP++R   ++G+ KPTPIQA  IP++L G+D+ G A+TGSGKTAAF +P LERLL
Sbjct: 297 EMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPILERLL 356

Query: 62  YRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMPD 121
           YRPK+    RV++LTP RELAIQ H++  KLA  TDI+ CL VGGLS K QEA LR  PD
Sbjct: 357 YRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKVQEAELRLRPD 416

Query: 122 VVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTMLF 181
           VV+ATPGR IDH+RNS S  +D + +L+LDEADR+LE GF+ E+ E++   PK RQTMLF
Sbjct: 417 VVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLF 476

Query: 182 SATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSKT 241
           SATMT  +D LI+  L KP+R+ AD   K   TL +E VRLR  RE  +E  LL +C   
Sbjct: 477 SATMTSSVDRLIRAGLNKPVRIMADSQKKTAGTLVQEFVRLRPGRESKREGYLLHICKTI 536

Query: 242 FTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIATD 301
           +T + IIF   K+ AH+++I+FGL G   AELHG++ Q QR+ ++E FR  +V++L+ATD
Sbjct: 537 YTERVIIFFRQKKIAHKMRIIFGLFGLSCAELHGSMNQAQRIQSVEDFRDGKVNFLLATD 596

Query: 302 VAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKR 361
           +A+RGLDI GV TVIN+  P+    YVHRVGRTARAGR G A+T   + DR ++KA  K 
Sbjct: 597 LASRGLDIKGVDTVINYEAPQTPEIYVHRVGRTARAGRSGTAITLAAEPDRKVVKAAVKA 656

Query: 362 A---GSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIV 421
               G+K+ SRI+      KW   I+ +ED++  I++EE+EE+ L+  EM+  K ENMI 
Sbjct: 657 GKSQGAKISSRIIDPADADKWQAEIDELEDEIEEIMQEEKEEKQLQNMEMQVKKGENMIK 716

Query: 422 HQEEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKRER 481
           +++EI SRPK+TWF T ++KK           K K +G        AE   +++K K + 
Sbjct: 717 YEDEISSRPKRTWFETQEDKK-----------KAKAAG-------RAELNGVRDKLKSKN 776

Query: 482 EKNLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKA 541
           E  L  K R+KL+    M E +++     G  E     + L+L K+  +  ++     K 
Sbjct: 777 EGKLSNKDRKKLDT---MQERKQERTYKKGSAERAGKGAVLNLKKVVKKVGRSAGPKKKG 820

Query: 542 LDSGK 544
            ++GK
Sbjct: 837 GNAGK 820

[Close]

BLAST of Cp4.1LG06g09390 vs. ExPASy Swiss-Prot
Match: Q54TJ4 (Probable ATP-dependent RNA helicase ddx27 OS=Dictyostelium discoideum OX=44689 GN=ddx27 PE=3 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 2.3e-124
Identity = 276/609 (45.32%), Postives = 390/609 (64.04%), Query Frame = 0


Query: 2   ELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLL 61
           EL+LSRPL++A + LG+++PTPIQA  IPLAL G+DI  SA TGSGKTAAF LP LERLL
Sbjct: 194 ELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLERLL 253

Query: 62  YRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMPD 121
           +R    RAIRVL+L P RELA+Q  S++E LAQF++I  CLIVGGLS K QE  LR  PD
Sbjct: 254 FRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVELRKSPD 313

Query: 122 VVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTMLF 181
           VV+ATPGR+IDHL N+  + LDDL +LILDEADRLL++GF  EI ++V  CP  RQTMLF
Sbjct: 314 VVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCPTNRQTMLF 373

Query: 182 SATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSKT 241
           SAT+ +E+  L KLSL +P+R+  D   +   TL +E V+++     ++ A+LL+LC++ 
Sbjct: 374 SATLNDEVKTLAKLSLQQPIRVQVDALMQVTSTLEQEFVKIKPQHLSDRPAILLSLCTRV 433

Query: 242 FT-SKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 301
           F     IIF  +K+  HRL+I+FGL+  KAAELHGNL+Q QR D+L+ FR  QV+YL+A+
Sbjct: 434 FNQGGTIIFCRSKKEVHRLRIIFGLSDLKAAELHGNLSQEQRFDSLQQFRDGQVNYLLAS 493

Query: 302 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 361
           DVA+RGLDIIGV+TVIN+  P ++ +Y+HRVGRTARAG +G + +F+TDNDR LLK I  
Sbjct: 494 DVASRGLDIIGVKTVINYNMPNNMANYIHRVGRTARAGMDGKSCSFITDNDRKLLKDIVT 553

Query: 362 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 421
           +A +K KSR V++ ++  W   IE + + +  I+REE +E  LRKAE    KAE +I + 
Sbjct: 554 KARNKAKSRSVSQDNVNFWRNRIEELTEDIKSIVREEMKEADLRKAEKTLDKAEKIISNA 613

Query: 422 EEIFSRPKKTWFITDKEK---KLVAKAAKTSLEKGK--TSGNEVVSAQHAEDLKMKEKRK 481
           +     P K W+ T +E+   K + K     +  GK   +  +V    +   +K K K+K
Sbjct: 614 DANVETP-KVWYKTKQEEDKSKELWKIENNIVNPGKKLKAPIDVTGVNNVPSIK-KLKQK 673

Query: 482 REREKNLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAV 541
           ++    L RK+RR  +  +E  E E+Q  +   GG++  D                    
Sbjct: 674 KDPYYGLSRKQRRHRQ-FKEEFEREQQEERKRKGGDDGDD-------------------- 733

Query: 542 NKALDSGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSF 601
           N+ +DSGK+ +++Q+ +KSS +   R E +R  +    +   Q++        KK+K   
Sbjct: 734 NEEIDSGKMFERSQRAQKSSGKETKRIESLRRNYMAGGALTDQEKQRVDNKKSKKNKRMI 779

Query: 602 KSKSRYKRK 605
            +K   K++
Sbjct: 794 VNKKEKKQR 779

[Close]

BLAST of Cp4.1LG06g09390 vs. NCBI nr
Match: XP_023536235.1 (DEAD-box ATP-dependent RNA helicase 28-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1112 bits (2877), Expect = 0.0
Identity = 604/604 (100.00%), Postives = 604/604 (100.00%), Query Frame = 0


Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL
Sbjct: 62  MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 121

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP
Sbjct: 122 LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 181

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML
Sbjct: 182 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 241

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK
Sbjct: 242 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 301

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT
Sbjct: 302 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 361

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 362 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 421

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ
Sbjct: 422 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 481

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK
Sbjct: 482 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 541

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD
Sbjct: 542 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 601

Query: 541 SGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKSR 600
           SGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKSR
Sbjct: 602 SGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKSR 661

Query: 601 YKRK 604
           YKRK
Sbjct: 662 YKRK 665

[Close]

BLAST of Cp4.1LG06g09390 vs. NCBI nr
Match: XP_023512999.1 (DEAD-box ATP-dependent RNA helicase 28-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1112 bits (2876), Expect = 0.0
Identity = 603/604 (99.83%), Postives = 604/604 (100.00%), Query Frame = 0


Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL
Sbjct: 144 MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 203

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           LYRPKRDRAIRVL+LTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP
Sbjct: 204 LYRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 263

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML
Sbjct: 264 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 323

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK
Sbjct: 324 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 383

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT
Sbjct: 384 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 443

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 444 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 503

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ
Sbjct: 504 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 563

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK
Sbjct: 564 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 623

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD
Sbjct: 624 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 683

Query: 541 SGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKSR 600
           SGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKSR
Sbjct: 684 SGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKSR 743

Query: 601 YKRK 604
           YKRK
Sbjct: 744 YKRK 747

[Close]

BLAST of Cp4.1LG06g09390 vs. NCBI nr
Match: XP_022937020.1 (DEAD-box ATP-dependent RNA helicase 28 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1099 bits (2843), Expect = 0.0
Identity = 599/604 (99.17%), Postives = 600/604 (99.34%), Query Frame = 0


Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL
Sbjct: 144 MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 203

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           LYRPKRDRAIRVL+LTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP
Sbjct: 204 LYRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 263

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML
Sbjct: 264 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 323

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK
Sbjct: 324 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 383

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT
Sbjct: 384 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 443

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 444 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 503

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ
Sbjct: 504 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 563

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK
Sbjct: 564 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 623

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           NLPRKKRRKLEAAREMLEEEKQNGKTG  GENKKDKSGLSLVKLAYRRAKAVKAVNKALD
Sbjct: 624 NLPRKKRRKLEAAREMLEEEKQNGKTGVWGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 683

Query: 541 SGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKSR 600
           SGKIVKQNQKTKKSSHRTQSRSEEMREMFQ DMSEQKQKR GSGGAGMKKSKHSFKSKSR
Sbjct: 684 SGKIVKQNQKTKKSSHRTQSRSEEMREMFQYDMSEQKQKRRGSGGAGMKKSKHSFKSKSR 743

Query: 601 YKRK 604
           YKRK
Sbjct: 744 YKRK 747

[Close]

BLAST of Cp4.1LG06g09390 vs. NCBI nr
Match: KAG6592218.1 (DEAD-box ATP-dependent RNA helicase 28, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1098 bits (2841), Expect = 0.0
Identity = 599/604 (99.17%), Postives = 601/604 (99.50%), Query Frame = 0


Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL
Sbjct: 145 MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 204

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           LYRPKRDRAIRVL+LTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP
Sbjct: 205 LYRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 264

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML
Sbjct: 265 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 324

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK
Sbjct: 325 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 384

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT
Sbjct: 385 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 444

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 445 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 504

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVN+ILREEREERALRKAEMEATKAENMIVHQ
Sbjct: 505 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNVILREEREERALRKAEMEATKAENMIVHQ 564

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK
Sbjct: 565 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 624

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           NLPRKKRRKLEAAREMLEEEKQNGKTGG  ENKKDKSGLSLVKLAYRRAKAVKAVNKALD
Sbjct: 625 NLPRKKRRKLEAAREMLEEEKQNGKTGG--ENKKDKSGLSLVKLAYRRAKAVKAVNKALD 684

Query: 541 SGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKSR 600
           SGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKR GSGGAGMKKSKHSFKSKSR
Sbjct: 685 SGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRRGSGGAGMKKSKHSFKSKSR 744

Query: 601 YKRK 604
           YKRK
Sbjct: 745 YKRK 746

[Close]

BLAST of Cp4.1LG06g09390 vs. NCBI nr
Match: XP_022937021.1 (DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucurbita moschata])

HSP 1 Score: 1097 bits (2837), Expect = 0.0
Identity = 599/604 (99.17%), Postives = 600/604 (99.34%), Query Frame = 0


Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL
Sbjct: 144 MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 203

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           LYRPKRDRAIRVL+LTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP
Sbjct: 204 LYRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 263

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML
Sbjct: 264 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 323

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK
Sbjct: 324 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 383

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT
Sbjct: 384 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 443

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 444 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 503

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ
Sbjct: 504 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 563

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK
Sbjct: 564 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 623

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           NLPRKKRRKLEAAREMLEEEKQNGKTGG  ENKKDKSGLSLVKLAYRRAKAVKAVNKALD
Sbjct: 624 NLPRKKRRKLEAAREMLEEEKQNGKTGG--ENKKDKSGLSLVKLAYRRAKAVKAVNKALD 683

Query: 541 SGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKSR 600
           SGKIVKQNQKTKKSSHRTQSRSEEMREMFQ DMSEQKQKR GSGGAGMKKSKHSFKSKSR
Sbjct: 684 SGKIVKQNQKTKKSSHRTQSRSEEMREMFQYDMSEQKQKRRGSGGAGMKKSKHSFKSKSR 743

Query: 601 YKRK 604
           YKRK
Sbjct: 744 YKRK 745

[Close]

BLAST of Cp4.1LG06g09390 vs. ExPASy TrEMBL
Match: A0A6J1FFD3 (DEAD-box ATP-dependent RNA helicase 28 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443445 PE=3 SV=1)

HSP 1 Score: 1099 bits (2843), Expect = 0.0
Identity = 599/604 (99.17%), Postives = 600/604 (99.34%), Query Frame = 0


Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL
Sbjct: 144 MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 203

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           LYRPKRDRAIRVL+LTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP
Sbjct: 204 LYRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 263

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML
Sbjct: 264 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 323

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK
Sbjct: 324 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 383

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT
Sbjct: 384 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 443

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 444 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 503

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ
Sbjct: 504 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 563

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK
Sbjct: 564 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 623

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           NLPRKKRRKLEAAREMLEEEKQNGKTG  GENKKDKSGLSLVKLAYRRAKAVKAVNKALD
Sbjct: 624 NLPRKKRRKLEAAREMLEEEKQNGKTGVWGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 683

Query: 541 SGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKSR 600
           SGKIVKQNQKTKKSSHRTQSRSEEMREMFQ DMSEQKQKR GSGGAGMKKSKHSFKSKSR
Sbjct: 684 SGKIVKQNQKTKKSSHRTQSRSEEMREMFQYDMSEQKQKRRGSGGAGMKKSKHSFKSKSR 743

Query: 601 YKRK 604
           YKRK
Sbjct: 744 YKRK 747

[Close]

BLAST of Cp4.1LG06g09390 vs. ExPASy TrEMBL
Match: A0A6J1F947 (DEAD-box ATP-dependent RNA helicase 28 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443445 PE=3 SV=1)

HSP 1 Score: 1097 bits (2837), Expect = 0.0
Identity = 599/604 (99.17%), Postives = 600/604 (99.34%), Query Frame = 0


Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL
Sbjct: 144 MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 203

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           LYRPKRDRAIRVL+LTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP
Sbjct: 204 LYRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 263

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML
Sbjct: 264 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 323

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK
Sbjct: 324 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 383

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT
Sbjct: 384 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 443

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 444 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 503

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ
Sbjct: 504 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 563

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK
Sbjct: 564 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 623

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           NLPRKKRRKLEAAREMLEEEKQNGKTGG  ENKKDKSGLSLVKLAYRRAKAVKAVNKALD
Sbjct: 624 NLPRKKRRKLEAAREMLEEEKQNGKTGG--ENKKDKSGLSLVKLAYRRAKAVKAVNKALD 683

Query: 541 SGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKSR 600
           SGKIVKQNQKTKKSSHRTQSRSEEMREMFQ DMSEQKQKR GSGGAGMKKSKHSFKSKSR
Sbjct: 684 SGKIVKQNQKTKKSSHRTQSRSEEMREMFQYDMSEQKQKRRGSGGAGMKKSKHSFKSKSR 743

Query: 601 YKRK 604
           YKRK
Sbjct: 744 YKRK 745

[Close]

BLAST of Cp4.1LG06g09390 vs. ExPASy TrEMBL
Match: A0A6J1II66 (DEAD-box ATP-dependent RNA helicase 28 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477138 PE=3 SV=1)

HSP 1 Score: 1092 bits (2825), Expect = 0.0
Identity = 596/604 (98.68%), Postives = 598/604 (99.01%), Query Frame = 0


Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL
Sbjct: 144 MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 203

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           LYRPKRDRAIRVL+LTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP
Sbjct: 204 LYRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 263

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML
Sbjct: 264 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 323

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK
Sbjct: 324 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 383

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
            FTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT
Sbjct: 384 RFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 443

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVT VTDNDRSLLKAIAK
Sbjct: 444 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTLVTDNDRSLLKAIAK 503

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ
Sbjct: 504 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 563

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK
Sbjct: 564 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 623

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           NLPRKKRRKLEA REMLEE KQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNK LD
Sbjct: 624 NLPRKKRRKLEAQREMLEE-KQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKVLD 683

Query: 541 SGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKSR 600
           SGKIVKQNQKTKKSS+RTQSRSEEMREMFQNDMSEQKQKR GSGGAGMKKSKHSFKSKSR
Sbjct: 684 SGKIVKQNQKTKKSSYRTQSRSEEMREMFQNDMSEQKQKRRGSGGAGMKKSKHSFKSKSR 743

Query: 601 YKRK 604
           YKRK
Sbjct: 744 YKRK 746

[Close]

BLAST of Cp4.1LG06g09390 vs. ExPASy TrEMBL
Match: A0A6J1IH00 (DEAD-box ATP-dependent RNA helicase 28 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477138 PE=3 SV=1)

HSP 1 Score: 1083 bits (2802), Expect = 0.0
Identity = 594/604 (98.34%), Postives = 596/604 (98.68%), Query Frame = 0


Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL
Sbjct: 144 MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 203

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           LYRPKRDRAIRVL+LTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP
Sbjct: 204 LYRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 263

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML
Sbjct: 264 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 323

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK
Sbjct: 324 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 383

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
            FTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT
Sbjct: 384 RFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 443

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVT VTDNDRSLLKAIAK
Sbjct: 444 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTLVTDNDRSLLKAIAK 503

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ
Sbjct: 504 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 563

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK
Sbjct: 564 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 623

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           NLPRKKRRKLEA REMLEE KQNGKTGG  ENKKDKSGLSLVKLAYRRAKAVKAVNK LD
Sbjct: 624 NLPRKKRRKLEAQREMLEE-KQNGKTGG--ENKKDKSGLSLVKLAYRRAKAVKAVNKVLD 683

Query: 541 SGKIVKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKSR 600
           SGKIVKQNQKTKKSS+RTQSRSEEMREMFQNDMSEQKQKR GSGGAGMKKSKHSFKSKSR
Sbjct: 684 SGKIVKQNQKTKKSSYRTQSRSEEMREMFQNDMSEQKQKRRGSGGAGMKKSKHSFKSKSR 743

Query: 601 YKRK 604
           YKRK
Sbjct: 744 YKRK 744

[Close]

BLAST of Cp4.1LG06g09390 vs. ExPASy TrEMBL
Match: A0A6J1DVH7 (DEAD-box ATP-dependent RNA helicase 28 OS=Momordica charantia OX=3673 GN=LOC111024428 PE=3 SV=1)

HSP 1 Score: 1053 bits (2723), Expect = 0.0
Identity = 576/605 (95.21%), Postives = 589/605 (97.36%), Query Frame = 0


Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL
Sbjct: 137 MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 196

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           LYRPKRDRAIRVL+LTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP
Sbjct: 197 LYRPKRDRAIRVLILTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 256

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML
Sbjct: 257 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 316

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEE+DELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK
Sbjct: 317 FSATMTEEVDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 376

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TFTSK IIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQV++LIAT
Sbjct: 377 TFTSKVIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVEFLIAT 436

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK
Sbjct: 437 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 496

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           RAGSKLKSRIVAEQSIKKWSE IE ME+QV  ILREEREERALRKAEMEATKAENMIVHQ
Sbjct: 497 RAGSKLKSRIVAEQSIKKWSETIERMEEQVTTILREEREERALRKAEMEATKAENMIVHQ 556

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           EEIFSRPKKTWFI+DKEKKLVAKAAK SL+KGKTSGNEV+SAQHAEDL+MKEKRKRE EK
Sbjct: 557 EEIFSRPKKTWFISDKEKKLVAKAAKASLDKGKTSGNEVLSAQHAEDLRMKEKRKRECEK 616

Query: 481 NLPRKKRRKLEAAREMLEEEKQNGKTGGGGENKKDKSGLSLVKLAYRRAKAVKAVNKALD 540
           NLPRKKRR+LEAAREMLEEEKQN KTGGGGENKKDK+GLSLVKLAYRRAKAVKAV KALD
Sbjct: 617 NLPRKKRRRLEAAREMLEEEKQNDKTGGGGENKKDKAGLSLVKLAYRRAKAVKAVKKALD 676

Query: 541 SGKIVK-QNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSGGAGMKKSKHSFKSKS 600
           SGKIVK QNQKTK SSH+T+SRSEEMREMFQNDMSEQKQKR G GG   KKSKHSFKSKS
Sbjct: 677 SGKIVKNQNQKTKHSSHKTESRSEEMREMFQNDMSEQKQKRRGGGGK--KKSKHSFKSKS 736

Query: 601 RYKRK 604
           RYKRK
Sbjct: 737 RYKRK 739

[Close]

BLAST of Cp4.1LG06g09390 vs. TAIR 10
Match: AT4G16630.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 822.4 bits (2123), Expect = 2.4e-238
Identity = 456/622 (73.31%), Postives = 525/622 (84.41%), Query Frame = 0


Query: 1   MELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERL 60
           MELNLSRPL+RACE LGY KPTPIQAACIPLALTGRD+C SAITGSGKTAAF+LPTLERL
Sbjct: 170 MELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERL 229

Query: 61  LYRPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMP 120
           L+RPKR  A RVL+LTP RELA+Q+HSMI+ LAQFTDI+C LIVGGLS +EQE  LRSMP
Sbjct: 230 LFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSMP 289

Query: 121 DVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 180
           D+VVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLL+ GF+ EI ELVRLCPKRRQTML
Sbjct: 290 DIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTML 349

Query: 181 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCSK 240
           FSATMTEE+ EL+KLSL KPLRLSADP+ +RP  LTEEVVR+RR RE NQEAVLL+LC++
Sbjct: 350 FSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCTR 409

Query: 241 TFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIAT 300
           TF SK IIFSGTKQAAHRLKILFGLAG KAAELHGNLTQ QRLD+LELFRKQ+VD+LIAT
Sbjct: 410 TFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFLIAT 469

Query: 301 DVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAK 360
           DVAARGLDIIGVQTVIN+ACPR++ SYVHRVGRTARAGREGYAVTFVTD+DRSLLK IAK
Sbjct: 470 DVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLKVIAK 529

Query: 361 RAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILREEREERALRKAEMEATKAENMIVHQ 420
           + GSKLKSR++ EQSI KWS++I+ MEDQ + ++  ER+ERALRKAEME  KAENM+ H+
Sbjct: 530 KVGSKLKSRVIPEQSIVKWSQIIDEMEDQYSAVISAERDERALRKAEMEFAKAENMLEHR 589

Query: 421 EEIFSRPKKTWFITDKEKKLVAKAAKTSLEKGKTSGNEVVSAQHAEDLKMKEKRKREREK 480
           +EI++RPK+TWF+T+KEKKLVA+A K S   G  +G E+VSA  AEDLKMKEKRKREREK
Sbjct: 590 DEIYARPKRTWFMTEKEKKLVAQAEKDS--AGNPAGGELVSADRAEDLKMKEKRKREREK 649

Query: 481 NLPRKKRRKLEAAREML-------EEEKQNGKTGGG---GENKK----DKSGLSLVKLAY 540
           NLPRKKRRKLEAAREML       EEE + G    G   G++KK    DK GL+L  L Y
Sbjct: 650 NLPRKKRRKLEAAREMLEDNEGEEEEEDEEGDEKRGRSRGKDKKKQETDKKGLTLKDLGY 709

Query: 541 RRAKAVKAVNKALDSGKI--VKQNQKTKKSSHRTQSRSEEMREMFQNDMSEQKQKRHGSG 600
            RAKAVKA  +A+DSGK+   K ++K  +S  R Q R EEM+++F++DM E+KQ R G+ 
Sbjct: 710 MRAKAVKAKQRAIDSGKMERPKPDKKQSRSKPRNQPRGEEMKDLFKSDMGEKKQGRGGAA 769

Query: 601 GAG--MKKSKHSFKSKSRYKRK 605
            A     KSK+SFKSK+RYKR+
Sbjct: 770 AAAKPRTKSKNSFKSKARYKRR 789

[Close]

BLAST of Cp4.1LG06g09390 vs. TAIR 10
Match: AT5G60990.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 248.1 bits (632), Expect = 1.9e-65
Identity = 150/404 (37.13%), Postives = 221/404 (54.70%), Query Frame = 0


Query: 2   ELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLL 61
           EL +   L++ACE LG+  P+ IQA  +P AL G+D+ G A TGSGKT AF++P L+ LL
Sbjct: 13  ELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQALL 72

Query: 62  -----YRPKR----DRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQ 121
                  PK+    D A    VL+P RELAIQ+    E L     +RC ++VGG+ R +Q
Sbjct: 73  EYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRMQQ 132

Query: 122 EAALRSMPDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLC 181
             AL   P V+VATPGR+ DH+ ++    L  L  L+LDEADRLL   F   + +++   
Sbjct: 133 TIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEI 192

Query: 182 PKRRQTMLFSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEA 241
           P  R+T LFSATMT+++ +L +  L  P+++ A        TL ++    R +    ++ 
Sbjct: 193 PLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQ---YRFVAAKYKDC 252

Query: 242 VLLALCSKTFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQ 301
            L+ + S+   S ++IF+ T      L ++    GF+A  + G +TQ +RL AL  F+  
Sbjct: 253 YLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAG 312

Query: 302 QVDYLIATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDR 361
           + + L+ TDVA+RGLDI  V  VIN+  P +   Y+HRVGRTARAGR G  ++ V   + 
Sbjct: 313 ECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYEL 372

Query: 362 SLLKAIAKRAGSKLKSRIVAEQSIKKWSEMIEGMEDQVNMILRE 397
                I K  G KL      E  +    E +   +    M ++E
Sbjct: 373 EWYIQIEKLIGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKE 413

[Close]

BLAST of Cp4.1LG06g09390 vs. TAIR 10
Match: AT1G16280.1 (RNA helicase 36 )

HSP 1 Score: 245.4 bits (625), Expect = 1.2e-64
Identity = 151/368 (41.03%), Postives = 209/368 (56.79%), Query Frame = 0


Query: 3   LNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLLY 62
           L L+   +  C+ LG  KPTP+Q  C+P  L GRD+ G A TGSGKTAAF+LP L RL  
Sbjct: 63  LGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHRLAE 122

Query: 63  RPKRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSMPDV 122
            P     +  LV+TP RELA Q+    + L    ++RC +IVGG+    Q  +L S P +
Sbjct: 123 DP---YGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHI 182

Query: 123 VVATPGRMIDHLRNSMSVD--LDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTML 182
           V+ TPGR+   L N+  V         L+LDEADR+L++GF  E+R + +  PK RQT+L
Sbjct: 183 VITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLL 242

Query: 183 FSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEE-VVRLRRMREVNQEAVLLALCS 242
           FSATMT  +  L++ S  K     A    K   TLT++ +   +  +E+    +L  +  
Sbjct: 243 FSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMED 302

Query: 243 KTFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIA 302
           K   S A+IF  T +   RL ++      +   +H   +Q  RL AL  F+  +V  L+A
Sbjct: 303 KGIRS-AMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLA 362

Query: 303 TDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIA 362
           TDVA+RGLDI  V  VIN+  PRD   YVHRVGRTARAGR G AV+ +T+ D  L+  I 
Sbjct: 363 TDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIE 422

Query: 363 KRAGSKLK 368
           +  G K++
Sbjct: 423 EEVGKKME 426

[Close]

BLAST of Cp4.1LG06g09390 vs. TAIR 10
Match: AT2G47330.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 214.2 bits (544), Expect = 3.0e-55
Identity = 134/378 (35.45%), Postives = 213/378 (56.35%), Query Frame = 0


Query: 2   ELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLL 61
           +   S  ++ A +   Y KPT IQ   +P+ L+GRD+ G A TGSGKTAAF LP +  ++
Sbjct: 232 DCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIM 291

Query: 62  YRP--KRDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSM 121
            +P  +RD     ++  P RELA Q+    +K ++   +R   + GG+S+ EQ   L++ 
Sbjct: 292 DQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAG 351

Query: 122 PDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTM 181
            ++VVATPGR+ID L+   ++ +   + L+LDEADR+ +LGF  ++R +V      RQT+
Sbjct: 352 CEIVVATPGRLIDMLK-MKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTL 411

Query: 182 LFSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCS 241
           LFSATM  ++++L +  L+ P+R++        + +T +VV +          +L  L  
Sbjct: 412 LFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDIT-QVVNVIPSDAEKLPWLLEKLPG 471

Query: 242 KTFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIA 301
                  ++F+  K     ++    L  FK A LHG+  Q  R++ L+ F+      LIA
Sbjct: 472 MIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIA 531

Query: 302 TDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAG-REGYAVTFVTDNDRSLLKAI 361
           TDVAARGLDI  ++TV+N+   +D+  +VHR+GRT RAG R+G A T VT  +       
Sbjct: 532 TDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQRE------- 591

Query: 362 AKRAGSKLKSRIVAEQSI 377
           A+ AG  + S + A Q++
Sbjct: 592 ARFAGELVNSLVAAGQNV 600

[Close]

BLAST of Cp4.1LG06g09390 vs. TAIR 10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 208.8 bits (530), Expect = 1.3e-53
Identity = 129/361 (35.73%), Postives = 195/361 (54.02%), Query Frame = 0


Query: 2   ELNLSRPLIRACEALGYAKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPTLERLL 61
           + N    ++ A   LG+ +PTPIQA   P+AL GRD+ G A TGSGKT A+ LP L  + 
Sbjct: 169 DANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVS 228

Query: 62  YRPK--RDRAIRVLVLTPARELAIQVHSMIEKLAQFTDIRCCLIVGGLSRKEQEAALRSM 121
            +P+  +D    VL+L P RELA+Q+     K    + +R   I GG  +  Q   LR  
Sbjct: 229 AQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRG 288

Query: 122 PDVVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIRELVRLCPKRRQTM 181
            ++V+ATPGR+ID L      +L  +  L+LDEADR+L++GF  +IR++V      RQT+
Sbjct: 289 VEIVIATPGRLIDML-ECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTL 348

Query: 182 LFSATMTEEIDELIKLSLTKPLRLSADPATKRPKTLTEEVVRLRRMREVNQEAVLLALCS 241
           L+SAT   E++ L +  L  P +        +      +V+ +    E     +L  L  
Sbjct: 349 LWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPE-KYNRLLTLLKQ 408

Query: 242 KTFTSKAIIFSGTKQAAHRLKILFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDYLIA 301
               SK +IF  TK+   ++     + G+ A  +HG+ TQ +R   L  F+  +   + A
Sbjct: 409 LMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTA 468

Query: 302 TDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIA 361
           TDVAARGLD+  ++ V+N+  P  L  Y+HR+GRT RAG +G A TF T ++    + + 
Sbjct: 469 TDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELV 527

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g09390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZRZ8	3.4e-237	73.31	DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana OX=3702 GN=RH28 P...	[more]
Q0INC5	8.3e-236	73.85	DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
A4QYM6	1.2e-125	48.66	ATP-dependent RNA helicase DRS1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4...	[more]
P0C2N8	2.0e-125	47.16	ATP-dependent RNA helicase drs1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR2...	[more]
Q54TJ4	2.3e-124	45.32	Probable ATP-dependent RNA helicase ddx27 OS=Dictyostelium discoideum OX=44689 G...	[more]

BLAST of Cp4.1LG06g09390 vs. NCBI nr


Match Name	Identity	Description
XP_023536235.1	100.00	DEAD-box ATP-dependent RNA helicase 28-like [Cucurbita pepo subsp. pepo]	[more]
XP_023512999.1	99.83	DEAD-box ATP-dependent RNA helicase 28-like [Cucurbita pepo subsp. pepo]	[more]
XP_022937020.1	99.17	DEAD-box ATP-dependent RNA helicase 28 isoform X1 [Cucurbita moschata]	[more]
KAG6592218.1	99.17	DEAD-box ATP-dependent RNA helicase 28, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022937021.1	99.17	DEAD-box ATP-dependent RNA helicase 28 isoform X2 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG06g09390 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1FFD3	99.17	DEAD-box ATP-dependent RNA helicase 28 isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1F947	99.17	DEAD-box ATP-dependent RNA helicase 28 isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1II66	98.68	DEAD-box ATP-dependent RNA helicase 28 isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1IH00	98.34	DEAD-box ATP-dependent RNA helicase 28 isoform X2 OS=Cucurbita maxima OX=3661 GN...	[more]
A0A6J1DVH7	95.21	DEAD-box ATP-dependent RNA helicase 28 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Cp4.1LG06g09390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16630.1	2.4e-238	73.31	DEA(D/H)-box RNA helicase family protein	[more]
AT5G60990.1	1.9e-65	37.13	DEA(D/H)-box RNA helicase family protein	[more]
AT1G16280.1	1.2e-64	41.03	RNA helicase 36	[more]
AT2G47330.1	3.0e-55	35.45	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G63120.2	1.3e-53	35.73	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 376..423
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 556..579
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 535..604
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 448..518
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 484..518
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 583..604
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 1..129 coord: 154..563
None	No IPR available	PANTHER	PTHR24031:SF729	BNAA01G17110D PROTEIN	coord: 1..129
None	No IPR available	PANTHER	PTHR24031:SF729	BNAA01G17110D PROTEIN	coord: 154..563
None	No IPR available	CDD	cd17947	DEADc_DDX27	coord: 9..204 e-value: 4.90202E-122 score: 356.95
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 215..347 e-value: 2.61683E-49 score: 165.758
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 253..338 e-value: 8.3E-30 score: 115.0
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 234..338 e-value: 1.3E-28 score: 99.6
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 233..377 score: 20.617111
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 17..218 e-value: 5.9E-58 score: 208.5
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 29..203 score: 30.276669
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 205..379 e-value: 8.0E-43 score: 147.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..204 e-value: 6.2E-75 score: 253.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 70..358
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 22..191 e-value: 2.4E-46 score: 157.7
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 149..157
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 1..26 score: 10.465039

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g09390.1	Cp4.1LG06g09390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003724	RNA helicase activity