Cp4.1LG06g04990 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTCCCAGTTTGGATCTGATAGCTCTTGCTTGTCTCTATGGCTGCTTCATTGCACTCACTCTCCTGCTCCTCATCTCCTCCCTCTTGGTTGTGTTCTTTCTATCAGCTACCCTCGCTCTGTTTTCAGTATTTGTGGGGGACTTGTATGATGCTTACTCTGTTTTGTGTCCATATTATGAAGAACTCAAAGCTGAAACTGAATTGGGTGTCTGTTTAATGGTGTATGGAGTAATGGGGTTTGGTGTTGATGTTGTTTTGGGTATAAAATCTCTTTTCCGACAGCAAAATCTAAGATTCACTGTAAGGCTTCCACAGATGAAGGTAAAAGAAAAACGGTGGCTTGGGTTTGGGCTTGACATGCTATGA ATGGTTCCCAGTTTGGATCTGATAGCTCTTGCTTGTCTCTATGGCTGCTTCATTGCACTCACTCTCCTGCTCCTCATCTCCTCCCTCTTGGTTGTGTTCTTTCTATCAGCTACCCTCGCTCTGTTTTCAGTATTTGTGGGGGACTTGTATGATGCTTACTCTGTTTTGTGTCCATATTATGAAGAACTCAAAGCTGAAACTGAATTGGGTGTCTGTTTAATGGTGTATGGAGTAATGGGGTTTGGTGTTGATGTTGTTTTGGGTATAAAATCTCTTTTCCGACAGCAAAATCTAAGATTCACTGTAAGGCTTCCACAGATGAAGGTAAAAGAAAAACGGTGGCTTGGGTTTGGGCTTGACATGCTATGA ATGGTTCCCAGTTTGGATCTGATAGCTCTTGCTTGTCTCTATGGCTGCTTCATTGCACTCACTCTCCTGCTCCTCATCTCCTCCCTCTTGGTTGTGTTCTTTCTATCAGCTACCCTCGCTCTGTTTTCAGTATTTGTGGGGGACTTGTATGATGCTTACTCTGTTTTGTGTCCATATTATGAAGAACTCAAAGCTGAAACTGAATTGGGTGTCTGTTTAATGGTGTATGGAGTAATGGGGTTTGGTGTTGATGTTGTTTTGGGTATAAAATCTCTTTTCCGACAGCAAAATCTAAGATTCACTGTAAGGCTTCCACAGATGAAGGTAAAAGAAAAACGGTGGCTTGGGTTTGGGCTTGACATGCTATGA MVPSLDLIALACLYGCFIALTLLLLISSLLVVFFLSATLALFSVFVGDLYDAYSVLCPYYEELKAETELGVCLMVYGVMGFGVDVVLGIKSLFRQQNLRFTVRLPQMKVKEKRWLGFGLDML Homology
BLAST of Cp4.1LG06g04990 vs. NCBI nr
Match: KAG7024618.1 (hypothetical protein SDJN02_13436, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 222 bits (566), Expect = 8.42e-71 Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of Cp4.1LG06g04990 vs. NCBI nr
Match: KAG6591737.1 (putative beta-1,4-xylosyltransferase IRX9H, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 222 bits (566), Expect = 1.38e-66 Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of Cp4.1LG06g04990 vs. NCBI nr
Match: KGN60326.1 (hypothetical protein Csa_001171 [Cucumis sativus]) HSP 1 Score: 143 bits (361), Expect = 1.88e-41 Identity = 83/120 (69.17%), Postives = 98/120 (81.67%), Query Frame = 0
BLAST of Cp4.1LG06g04990 vs. NCBI nr
Match: KAA0038615.1 (hypothetical protein E6C27_scaffold92G001450 [Cucumis melo var. makuwa] >TYK31214.1 hypothetical protein E5676_scaffold455G005000 [Cucumis melo var. makuwa]) HSP 1 Score: 140 bits (352), Expect = 4.41e-40 Identity = 82/120 (68.33%), Postives = 97/120 (80.83%), Query Frame = 0
BLAST of Cp4.1LG06g04990 vs. NCBI nr
Match: KAF9662227.1 (hypothetical protein SADUNF_Sadunf18G0031300 [Salix dunnii]) HSP 1 Score: 67.4 bits (163), Expect = 2.43e-10 Identity = 44/103 (42.72%), Postives = 66/103 (64.08%), Query Frame = 0
BLAST of Cp4.1LG06g04990 vs. ExPASy TrEMBL
Match: A0A0A0LJX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895720 PE=4 SV=1) HSP 1 Score: 143 bits (361), Expect = 9.12e-42 Identity = 83/120 (69.17%), Postives = 98/120 (81.67%), Query Frame = 0
BLAST of Cp4.1LG06g04990 vs. ExPASy TrEMBL
Match: A0A5A7TB69 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005000 PE=4 SV=1) HSP 1 Score: 140 bits (352), Expect = 2.13e-40 Identity = 82/120 (68.33%), Postives = 97/120 (80.83%), Query Frame = 0
BLAST of Cp4.1LG06g04990 vs. ExPASy TrEMBL
Match: A0A6A1UX23 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G014171 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 5.20e-09 Identity = 42/101 (41.58%), Postives = 65/101 (64.36%), Query Frame = 0
BLAST of Cp4.1LG06g04990 vs. ExPASy TrEMBL
Match: A0A5N5J7Y9 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_027916 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.96e-08 Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = 0
BLAST of Cp4.1LG06g04990 vs. ExPASy TrEMBL
Match: A0A6N2NHX1 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS506179 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 2.83e-08 Identity = 41/101 (40.59%), Postives = 63/101 (62.38%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|