Cp4.1LG06g04740 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g04740
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	flowering-promoting factor 1-like protein 1
Location	Cp4.1LG06: 2176571 .. 2176939 (+)
RNA-Seq Expression	Cp4.1LG06g04740
Synteny	Cp4.1LG06g04740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGGCGTTTGGGTATTCCGATCCAACGGTGTGATGCGCCTCGTCGAAAACGCTCAGGCCGGCGGCGATTACTCCTCCGACGGCCACCATCACCACCACCACCACCACAACGGCGGCGGAAGAAAGAAGATTCTGGTTCATCTTCCTTCCGGCCAGCCGGTCACATCCTACGGATTTCTTCAGAAGATTCTGGAAGGTCTAGGATGGGAGAGATATTACGAAGGCGATCCCGATTTCTTCCAATTTCATAAGCGATCTTCTATTGATCTCATTTCGCTCCCAATGGACTTCTCCAAATTCAACTCCATTTATATGTACGATCTCGTCGTCAAGAACCCTAACGTTTTTCACGTCCGCGAGCCCTAA

mRNA sequence

ATGTCAGGCGTTTGGGTATTCCGATCCAACGGTGTGATGCGCCTCGTCGAAAACGCTCAGGCCGGCGGCGATTACTCCTCCGACGGCCACCATCACCACCACCACCACCACAACGGCGGCGGAAGAAAGAAGATTCTGGTTCATCTTCCTTCCGGCCAGCCGGTCACATCCTACGGATTTCTTCAGAAGATTCTGGAAGGTCTAGGATGGGAGAGATATTACGAAGGCGATCCCGATTTCTTCCAATTTCATAAGCGATCTTCTATTGATCTCATTTCGCTCCCAATGGACTTCTCCAAATTCAACTCCATTTATATGTACGATCTCGTCGTCAAGAACCCTAACGTTTTTCACGTCCGCGAGCCCTAA

Coding sequence (CDS)

ATGTCAGGCGTTTGGGTATTCCGATCCAACGGTGTGATGCGCCTCGTCGAAAACGCTCAGGCCGGCGGCGATTACTCCTCCGACGGCCACCATCACCACCACCACCACCACAACGGCGGCGGAAGAAAGAAGATTCTGGTTCATCTTCCTTCCGGCCAGCCGGTCACATCCTACGGATTTCTTCAGAAGATTCTGGAAGGTCTAGGATGGGAGAGATATTACGAAGGCGATCCCGATTTCTTCCAATTTCATAAGCGATCTTCTATTGATCTCATTTCGCTCCCAATGGACTTCTCCAAATTCAACTCCATTTATATGTACGATCTCGTCGTCAAGAACCCTAACGTTTTTCACGTCCGCGAGCCCTAA

Protein sequence

MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHNGGGRKKILVHLPSGQPVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVREP

Homology

[Close]

BLAST of Cp4.1LG06g04740 vs. ExPASy Swiss-Prot
Match: Q9LXB5 (Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLP2 PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.3e-36
Identity = 74/121 (61.16%), Postives = 90/121 (74.38%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHNGGGRKKILVHLPSGQPVTSYGF 60
           MSGVWVF +NGV+RLVEN    G  S+  H          GR+ +LV+LP+G+ V+SY  
Sbjct: 1   MSGVWVF-NNGVIRLVENPNQSGGVSTQSH----------GRRNVLVYLPTGEAVSSYSS 60

Query: 61  LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVR 120
           L++IL  LGWERY+ GD D  Q+HKRSSIDLISLP DFSKFNS+YMYD+VVKNPN FHVR
Sbjct: 61  LEQILRSLGWERYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVR 110

Query: 121 E 122
           +
Sbjct: 121 D 110

[Close]

BLAST of Cp4.1LG06g04740 vs. ExPASy Swiss-Prot
Match: Q5Q0B3 (Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLP1 PE=2 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-35
Identity = 81/125 (64.80%), Postives = 92/125 (73.60%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENA--QAGGDYSSDGHHHHHHHHNGGGRKKILVHLPSGQPVTSY 60
           MSGVWVF  NGVMRLVEN   Q+ GD S       +       R+KILVHLPS + V+SY
Sbjct: 1   MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQR--MRRKILVHLPSSEVVSSY 60

Query: 61  GFLQKILEGLGWERYYEGD--PDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNV 120
           G L+KIL+ LGWERYY GD      QFHKR+SIDLISLP DFSKFNSI+MYD+VVKNPNV
Sbjct: 61  GSLEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKNPNV 120

Query: 121 FHVRE 122
           FHVR+
Sbjct: 121 FHVRD 123

[Close]

BLAST of Cp4.1LG06g04740 vs. ExPASy Swiss-Prot
Match: O24340 (Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-33
Identity = 73/123 (59.35%), Postives = 93/123 (75.61%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENA-QAGGDYSSDGHHHHHHHHNGGGRKKILVHLPSGQPVTSYG 60
           MSGVWVF+ NGV+RLVEN  Q+GGD +S              R+K++V+LP+G+ ++SY 
Sbjct: 1   MSGVWVFK-NGVIRLVENPNQSGGDTNS--------------RRKVMVYLPTGEVISSYS 60

Query: 61  FLQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFH 120
            L++IL  LGWERY+  GD D  QFHKRSSIDLISLP DF+KF+S+YMYD+VVKNPN FH
Sbjct: 61  TLEQILRSLGWERYFGGGDTDLLQFHKRSSIDLISLPKDFTKFSSVYMYDIVVKNPNYFH 108

Query: 121 VRE 122
           VR+
Sbjct: 121 VRD 108

[Close]

BLAST of Cp4.1LG06g04740 vs. ExPASy Swiss-Prot
Match: O23624 (Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.8e-33
Identity = 71/122 (58.20%), Postives = 90/122 (73.77%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHNGGGRKKILVHLPSGQPVTSYGF 60
           MSGVWVF+ NGV+RLVEN    G  + +             R+K++V+LP+G+ V+SY  
Sbjct: 1   MSGVWVFK-NGVIRLVENPNQSGSDTQN-------------RRKVMVYLPTGEVVSSYST 60

Query: 61  LQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHV 120
           L++IL+ LGWERY+  GD D  QFHKRSSIDLISLP DF+KFNS+YMYD+VVKNPN FHV
Sbjct: 61  LEQILQSLGWERYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHV 108

Query: 121 RE 122
           R+
Sbjct: 121 RD 108

[Close]

BLAST of Cp4.1LG06g04740 vs. ExPASy Swiss-Prot
Match: Q9LGE3 (Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAA1 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 8.0e-29
Identity = 69/119 (57.98%), Postives = 81/119 (68.07%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHNGGGRKKILVHLPSGQPVTSYGF 60
           MSGVWVF+ NGV+RLVE  QA    +             GGR+K LVH PSGQ V+SY  
Sbjct: 1   MSGVWVFK-NGVVRLVEKQQATAGTAV-----------AGGRRKALVHTPSGQVVSSYAA 60

Query: 61  LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHV 120
           L+  L  LGWERYYE DP  FQFHKR S+DLISLP DFS F+S++MYD+VVKN + F V
Sbjct: 61  LEARLTALGWERYYE-DPSLFQFHKRGSLDLISLPADFSAFSSVHMYDIVVKNRDSFRV 106

[Close]

BLAST of Cp4.1LG06g04740 vs. NCBI nr
Match: XP_023536365.1 (flowering-promoting factor 1-like protein 2 [Cucurbita pepo subsp. pepo] >KAG6591620.1 Flowering-promoting factor 1-like protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024503.1 Flowering-promoting factor 1-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256 bits (653), Expect = 5.50e-86
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHNGGGRKKILVHLPSGQPVTSYGF 60
           MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHNGGGRKKILVHLPSGQPVTSYGF
Sbjct: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHNGGGRKKILVHLPSGQPVTSYGF 60

Query: 61  LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVR 120
           LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVR
Sbjct: 61  LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVR 120

Query: 121 EP 122
           EP
Sbjct: 121 EP 122

[Close]

BLAST of Cp4.1LG06g04740 vs. NCBI nr
Match: XP_022937028.1 (flowering-promoting factor 1-like protein 2 [Cucurbita moschata])

HSP 1 Score: 249 bits (635), Expect = 2.97e-83
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHNGGGRKKILVHLPSGQPVTSYGF 60
           MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHH NGGGRKKILVHLPSGQPVTSYGF
Sbjct: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHH-NGGGRKKILVHLPSGQPVTSYGF 60

Query: 61  LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVR 120
           LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVR
Sbjct: 61  LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVR 120

Query: 121 EP 122
           EP
Sbjct: 121 EP 121

[Close]

BLAST of Cp4.1LG06g04740 vs. NCBI nr
Match: XP_022976219.1 (flowering-promoting factor 1-like protein 2 [Cucurbita maxima])

HSP 1 Score: 243 bits (621), Expect = 3.80e-81
Identity = 119/122 (97.54%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHNGGGRKKILVHLPSGQPVTSYGF 60
           MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHH   NGGGRKKILVHLPSGQPVTSYGF
Sbjct: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHH---NGGGRKKILVHLPSGQPVTSYGF 60

Query: 61  LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVR 120
           LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVR
Sbjct: 61  LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVR 119

Query: 121 EP 122
           EP
Sbjct: 121 EP 119

[Close]

BLAST of Cp4.1LG06g04740 vs. NCBI nr
Match: XP_008466327.1 (PREDICTED: flowering-promoting factor 1-like protein 2 [Cucumis melo] >KAA0052786.1 flowering-promoting factor 1-like protein 2 [Cucumis melo var. makuwa] >TYK08705.1 flowering-promoting factor 1-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 237 bits (605), Expect = 1.46e-78
Identity = 116/129 (89.92%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHN-------GGGRKKILVHLPSGQ 60
           MSGVWVFRSNGVMRLVEN+QAG DYSSDGHH HHHHH+       GGGRKK+LVHLPSGQ
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGGGRKKVLVHLPSGQ 60

Query: 61  PVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKN 120
           PV SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKN
Sbjct: 61  PVCSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKN 120

Query: 121 PNVFHVREP 122
           PNVFHVREP
Sbjct: 121 PNVFHVREP 129

[Close]

BLAST of Cp4.1LG06g04740 vs. NCBI nr
Match: XP_004136318.1 (flowering-promoting factor 1-like protein 2 [Cucumis sativus] >KGN60157.1 hypothetical protein Csa_002053 [Cucumis sativus])

HSP 1 Score: 233 bits (595), Expect = 4.01e-77
Identity = 113/123 (91.87%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHNGGG-RKKILVHLPSGQPVTSYG 60
           MSGVWVFRSNGVMRLVEN+QAG DYSSDGH H HHHH GGG RKK+LVHLPSGQPV SYG
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGDDYSSDGHGHQHHHHGGGGGRKKVLVHLPSGQPVCSYG 60

Query: 61  FLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHV 120
           FLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYM+DLV+KNPNVFHV
Sbjct: 61  FLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMFDLVIKNPNVFHV 120

Query: 121 REP 122
           REP
Sbjct: 121 REP 123

[Close]

BLAST of Cp4.1LG06g04740 vs. ExPASy TrEMBL
Match: A0A6J1FEW7 (flowering-promoting factor 1-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111443448 PE=3 SV=1)

HSP 1 Score: 249 bits (635), Expect = 1.44e-83
Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHNGGGRKKILVHLPSGQPVTSYGF 60
           MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHH NGGGRKKILVHLPSGQPVTSYGF
Sbjct: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHH-NGGGRKKILVHLPSGQPVTSYGF 60

Query: 61  LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVR 120
           LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVR
Sbjct: 61  LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVR 120

Query: 121 EP 122
           EP
Sbjct: 121 EP 121

[Close]

BLAST of Cp4.1LG06g04740 vs. ExPASy TrEMBL
Match: A0A6J1IMX4 (flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111476674 PE=3 SV=1)

HSP 1 Score: 243 bits (621), Expect = 1.84e-81
Identity = 119/122 (97.54%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHNGGGRKKILVHLPSGQPVTSYGF 60
           MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHH   NGGGRKKILVHLPSGQPVTSYGF
Sbjct: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHH---NGGGRKKILVHLPSGQPVTSYGF 60

Query: 61  LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVR 120
           LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVR
Sbjct: 61  LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVR 119

Query: 121 EP 122
           EP
Sbjct: 121 EP 119

[Close]

BLAST of Cp4.1LG06g04740 vs. ExPASy TrEMBL
Match: A0A5A7UF14 (Flowering-promoting factor 1-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64983G00010 PE=3 SV=1)

HSP 1 Score: 237 bits (605), Expect = 7.06e-79
Identity = 116/129 (89.92%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHN-------GGGRKKILVHLPSGQ 60
           MSGVWVFRSNGVMRLVEN+QAG DYSSDGHH HHHHH+       GGGRKK+LVHLPSGQ
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGGGRKKVLVHLPSGQ 60

Query: 61  PVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKN 120
           PV SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKN
Sbjct: 61  PVCSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKN 120

Query: 121 PNVFHVREP 122
           PNVFHVREP
Sbjct: 121 PNVFHVREP 129

[Close]

BLAST of Cp4.1LG06g04740 vs. ExPASy TrEMBL
Match: A0A1S3CSB1 (flowering-promoting factor 1-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103503767 PE=3 SV=1)

HSP 1 Score: 237 bits (605), Expect = 7.06e-79
Identity = 116/129 (89.92%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHN-------GGGRKKILVHLPSGQ 60
           MSGVWVFRSNGVMRLVEN+QAG DYSSDGHH HHHHH+       GGGRKK+LVHLPSGQ
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGDDYSSDGHHQHHHHHHHHHGGGGGGGRKKVLVHLPSGQ 60

Query: 61  PVTSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKN 120
           PV SYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKN
Sbjct: 61  PVCSYGFLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKN 120

Query: 121 PNVFHVREP 122
           PNVFHVREP
Sbjct: 121 PNVFHVREP 129

[Close]

BLAST of Cp4.1LG06g04740 vs. ExPASy TrEMBL
Match: A0A0A0LHE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881700 PE=3 SV=1)

HSP 1 Score: 233 bits (595), Expect = 1.94e-77
Identity = 113/123 (91.87%), Postives = 117/123 (95.12%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHNGGG-RKKILVHLPSGQPVTSYG 60
           MSGVWVFRSNGVMRLVEN+QAG DYSSDGH H HHHH GGG RKK+LVHLPSGQPV SYG
Sbjct: 1   MSGVWVFRSNGVMRLVENSQAGDDYSSDGHGHQHHHHGGGGGRKKVLVHLPSGQPVCSYG 60

Query: 61  FLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHV 120
           FLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYM+DLV+KNPNVFHV
Sbjct: 61  FLQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMFDLVIKNPNVFHV 120

Query: 121 REP 122
           REP
Sbjct: 121 REP 123

[Close]

BLAST of Cp4.1LG06g04740 vs. TAIR 10
Match: AT5G10625.1 (BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 152.9 bits (385), Expect = 1.6e-37
Identity = 74/121 (61.16%), Postives = 90/121 (74.38%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHNGGGRKKILVHLPSGQPVTSYGF 60
           MSGVWVF +NGV+RLVEN    G  S+  H          GR+ +LV+LP+G+ V+SY  
Sbjct: 1   MSGVWVF-NNGVIRLVENPNQSGGVSTQSH----------GRRNVLVYLPTGEAVSSYSS 60

Query: 61  LQKILEGLGWERYYEGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHVR 120
           L++IL  LGWERY+ GD D  Q+HKRSSIDLISLP DFSKFNS+YMYD+VVKNPN FHVR
Sbjct: 61  LEQILRSLGWERYFSGDSDLIQYHKRSSIDLISLPRDFSKFNSVYMYDIVVKNPNSFHVR 110

Query: 121 E 122
           +
Sbjct: 121 D 110

[Close]

BLAST of Cp4.1LG06g04740 vs. TAIR 10
Match: AT4G31380.1 (FPF1-like protein 1 )

HSP 1 Score: 150.6 bits (379), Expect = 8.2e-37
Identity = 81/125 (64.80%), Postives = 92/125 (73.60%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENA--QAGGDYSSDGHHHHHHHHNGGGRKKILVHLPSGQPVTSY 60
           MSGVWVF  NGVMRLVEN   Q+ GD S       +       R+KILVHLPS + V+SY
Sbjct: 58  MSGVWVFNKNGVMRLVENPYNQSAGDSSESSSSGGNQQQR--MRRKILVHLPSSEVVSSY 117

Query: 61  GFLQKILEGLGWERYYEGD--PDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNV 120
           G L+KIL+ LGWERYY GD      QFHKR+SIDLISLP DFSKFNSI+MYD+VVKNPNV
Sbjct: 118 GSLEKILKNLGWERYYSGDNTDHLLQFHKRTSIDLISLPRDFSKFNSIHMYDIVVKNPNV 177

Query: 121 FHVRE 122
           FHVR+
Sbjct: 178 FHVRD 180

[Close]

BLAST of Cp4.1LG06g04740 vs. TAIR 10
Match: AT5G24860.1 (flowering promoting factor 1 )

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-34
Identity = 71/122 (58.20%), Postives = 90/122 (73.77%), Query Frame = 0


Query: 1   MSGVWVFRSNGVMRLVENAQAGGDYSSDGHHHHHHHHNGGGRKKILVHLPSGQPVTSYGF 60
           MSGVWVF+ NGV+RLVEN    G  + +             R+K++V+LP+G+ V+SY  
Sbjct: 1   MSGVWVFK-NGVIRLVENPNQSGSDTQN-------------RRKVMVYLPTGEVVSSYST 60

Query: 61  LQKILEGLGWERYY-EGDPDFFQFHKRSSIDLISLPMDFSKFNSIYMYDLVVKNPNVFHV 120
           L++IL+ LGWERY+  GD D  QFHKRSSIDLISLP DF+KFNS+YMYD+VVKNPN FHV
Sbjct: 61  LEQILQSLGWERYFGGGDTDLLQFHKRSSIDLISLPRDFTKFNSVYMYDIVVKNPNYFHV 108

Query: 121 RE 122
           R+
Sbjct: 121 RD 108

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g04740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXB5	2.3e-36	61.16	Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=F...	[more]
Q5Q0B3	1.2e-35	64.80	Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=F...	[more]
O24340	1.1e-33	59.35	Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1	[more]
O23624	1.8e-33	58.20	Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1	[more]
Q9LGE3	8.0e-29	57.98	Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=3...	[more]

BLAST of Cp4.1LG06g04740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536365.1	5.50e-86	100.00	flowering-promoting factor 1-like protein 2 [Cucurbita pepo subsp. pepo] >KAG659...	[more]
XP_022937028.1	2.97e-83	99.18	flowering-promoting factor 1-like protein 2 [Cucurbita moschata]	[more]
XP_022976219.1	3.80e-81	97.54	flowering-promoting factor 1-like protein 2 [Cucurbita maxima]	[more]
XP_008466327.1	1.46e-78	89.92	PREDICTED: flowering-promoting factor 1-like protein 2 [Cucumis melo] >KAA005278...	[more]
XP_004136318.1	4.01e-77	91.87	flowering-promoting factor 1-like protein 2 [Cucumis sativus] >KGN60157.1 hypoth...	[more]

BLAST of Cp4.1LG06g04740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FEW7	1.44e-83	99.18	flowering-promoting factor 1-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IMX4	1.84e-81	97.54	flowering-promoting factor 1-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5A7UF14	7.06e-79	89.92	Flowering-promoting factor 1-like protein 2 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CSB1	7.06e-79	89.92	flowering-promoting factor 1-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103503...	[more]
A0A0A0LHE6	1.94e-77	91.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881700 PE=3 SV=1	[more]

BLAST of Cp4.1LG06g04740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10625.1	1.6e-37	61.16	BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:A...	[more]
AT4G31380.1	8.2e-37	64.80	FPF1-like protein 1	[more]
AT5G24860.1	1.3e-34	58.20	flowering promoting factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33433:SF15	FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 2	coord: 1..121
IPR039274	Flowering-promoting factor 1	PANTHER	PTHR33433	FLOWERING-PROMOTING FACTOR 1-LIKE PROTEIN 1	coord: 1..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g04740.1	Cp4.1LG06g04740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem