Cp4.1LG06g04720 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCGCGTTAGACACCCGTGAGGAATGGGGCATTCGTGGCTTCTCCAATTCTACCGCGAAGATTGGGCATCGAGAGCGGAAGGGCAACGCACGAAGCTACGGCTTCACTTCATCTGAAATTGGTAAAGTGAACAACTCTCTCTCTCTCTCTCAACTGATAAATCTTCAGCATTGCAATATCATCATCGTTCATTCGATTTATTTTGCAATTTCGATCACTTTCCAACTTTTCGCGCACTCTTTTCTGCTTTACTTTGATTTACTTCTTAATTCATCCGCTAGGCGAACGAAATCGTGAGTATAAGCGTCTATTCTACCCGATATCCTTCGATTCTTTGTTTATTGTTGATGGAATCAACATCGTTTCAATTTAATCTCATAAATTTATGGTTTGTTTAGTTTCTACTACGGAATGGCGTTTGATTTTTCGTCGTCTCGTGTTGAATCGTGGATAGACTCATTTGGATTTGAAATAGAGATTTGAAATTTTCGAAACTGGAAACGAAGAACATTTGAGTTGGAAATGAAGAAAGAAAACGGCAACTGTGGATCGGGGGTTTCAGGTTCTCGTCGGACGCGGTCTCAAATAGCACCGGAATGGACCGCGGCGGAATGCCTTGTTCTTGTTAATGTGATTGGTGCTGTGGAGGCTGATTGTTTGAAAGCTTTGTCTAGCTATCAGAAATGGAAGATTGTTGCAGAGGACTGCACAGCTTTGAATGTGGCTCGGACTTCGAATCAATGCAGGAAGAAGTGGGAGTGTTTGCTGATTGAACAGGATGTTATCAAGCAATGGGAGTTAACGATGCCGGAGGATGATTCGTATTGGTGTTTAGAGAGTGGAAGGAGAAAAGAATTAGGACTTCCTGACTACTTTGACGAGGAGCTGTTCAAAGCAATTGATAATGTCTCATCAATGAGGGCGAACCAGTCGGATACGGAGCCCGATAACGATCCAGAGGCTGCCGTTGAGAACGCCGATGAAATTTCAGAGCCTGGTATGATACTTTATTTCCTAGAGCTCTTAGAGATTAAGTTTTCATGTGAATTTATTGCTTTAAGTACACTTCGATAATAATCATGTTTTGATTTTGCGAGTGGTCAACAAGGGAAATGAAAATAAAGAGCATAGAGGGAATGAGTTCTAGCACGGTAGCTAGGCTAGGTAAGACGGTTGTCCCATGAGAATAGTTTATGGATATTACAAAAATTACAGTTTTTGCTCCTTGGCCAACCCCTAGAGGTTGGCCTCAAGGGCCTCAACTTTGGCCGGAGCTCATGGGGGTCGGCCTTTCGGGCTCGATTGTGACCCTCTTCAGATACCCTTCATTGCCTTTAGACATCCTAGCGATTAGTCGTGTCAGTTATGAGCATAATGCAAGCAGGGGTTCTGATAGCCTGGTTATAAGATGATATCTTGTTTTAGTTTCTTGATCAGTGATGATCAGTGATTGAGGAAATTTCAGAAACGTTTTTTCTTCTTCTTGCTTTCGATGCTAAAAACTCCGGAAAGAATAGTTTAACTGCTTCAGAGTCTCAGATACTGTGCTTCCTTCGAACATTTCATGAATATATGTGCTTGTATCTAGAAATCATGTCTACGTAAAAATCAAAACGAGACATAGAACGGGTCGGTATTATGGTGATTCCAGGATCTAGATTCATTATTTCTTTTCCTTATAATCCATGAGGTGCAATTTGAACTTTTCTAACTGCATTTTCATAAGGGTTAATTGTGAATTTTTTTAAAACCGAAAAAACGGGTTTGTCGTAACTGCATAAATAGCTTTGCATCATGTTCTAAAGTGTGGTTAAAGGGTGAGATGGATCTTACAATGGCTGTCTTCAAATTACTTCAATAATATTGGTCTTCTTATTTCTGATTTTTTCATGTTAGGCCCTAAAAGGCAAAGACGTGGTTCAATGTCTAAGAGAAATCAAGGCCTTGAGAAATCTTTAGAATGTAAAGAAGACGAAGAGGATGAAGCAGAAGAACAACCTCTATTAAGCTCTCCAGAATCAGACCTTCGCGATTGCTACATCAAAAACAACGGAGCAAAGGCGACCGACGACATTGAACCCGAAGAGCAAATGATGGTGAAGAAATTGCTTGAAAATGCAGAAAATGTTCAAGAAATTGTGTCTGAGAATGCAGAATGTGCAACTTCTGATGAAAAGAATGACAAGGACCAAACTAATTTGATAAGACGTCAAGGGAGCAAGCTTATCAGATGCCTAGGAGATTTTCTCAACACCATTAACGATCTCCGTGACCTGCTCGAAGATTGTGAGTGATTCTCTCTTCACGAAAATTTAGGTTTTCGTTGACCCACCAAGTAAGCGTTGTTCTCAAATGGTATCCTCGACTCCGTACGTAAATGTTTGTTTAAATCATTTTGTTAGCACGTCTTAGGAAATTGCCAATTTGTTGACGGTTTAGACTTTTGAATCTTCTCGTCTTTCTTCCTACAGACAAAATGTCAGGTTGGCCATTCGAGCAACGCTTAAACGCCGTCGACATTTTCCAGGTTACAGATAGAAACCCAATCTAATGTTTATTTATGAAAACTTTTCTTTTTTTGTTCTTTTTTTCATGAATAACAAGAAAGATCGTACCAAACTCCAAACTAGGAACATTAAACTATGTTGTGCTATTCCCTTTGATGGAGAGTGGGGGGAACAAACTATGCAATATCTCTTAAAAGAACCAGCCTTTAAACAGCTCATCAAAACAAGAAACTTCTCTTTATTGCTTCTCCATTTTGATCTTCCTTCATTTTCCCTTCCAAATACACTTTGCAACACCTTCCCTCACCCATGGCTCATAC TGCGCGTTAGACACCCGTGAGGAATGGGGCATTCGTGGCTTCTCCAATTCTACCGCGAAGATTGGGCATCGAGAGCGGAAGGGCAACGCACGAAGCTACGGCTTCACTTCATCTGAAATTGTTTCTACTACGGAATGGCGTTTGATTTTTCGTCGTCTCGTGTTGAATCGTGGATAGACTCATTTGGATTTGAAATAGAGATTTGAAATTTTCGAAACTGGAAACGAAGAACATTTGAGTTGGAAATGAAGAAAGAAAACGGCAACTGTGGATCGGGGGTTTCAGGTTCTCGTCGGACGCGGTCTCAAATAGCACCGGAATGGACCGCGGCGGAATGCCTTGTTCTTGTTAATGTGATTGGTGCTGTGGAGGCTGATTGTTTGAAAGCTTTGTCTAGCTATCAGAAATGGAAGATTGTTGCAGAGGACTGCACAGCTTTGAATGTGGCTCGGACTTCGAATCAATGCAGGAAGAAGTGGGAGTGTTTGCTGATTGAACAGGATGTTATCAAGCAATGGGAGTTAACGATGCCGGAGGATGATTCGTATTGGTGTTTAGAGAGTGGAAGGAGAAAAGAATTAGGACTTCCTGACTACTTTGACGAGGAGCTGTTCAAAGCAATTGATAATGTCTCATCAATGAGGGCGAACCAGTCGGATACGGAGCCCGATAACGATCCAGAGGCTGCCGTTGAGAACGCCGATGAAATTTCAGAGCCTGGCCCTAAAAGGCAAAGACGTGGTTCAATGTCTAAGAGAAATCAAGGCCTTGAGAAATCTTTAGAATGTAAAGAAGACGAAGAGGATGAAGCAGAAGAACAACCTCTATTAAGCTCTCCAGAATCAGACCTTCGCGATTGCTACATCAAAAACAACGGAGCAAAGGCGACCGACGACATTGAACCCGAAGAGCAAATGATGGTGAAGAAATTGCTTGAAAATGCAGAAAATGTTCAAGAAATTGTGTCTGAGAATGCAGAATGTGCAACTTCTGATGAAAAGAATGACAAGGACCAAACTAATTTGATAAGACGTCAAGGGAGCAAGCTTATCAGATGCCTAGGAGATTTTCTCAACACCATTAACGATCTCCGTGACCTGCTCGAAGATTGTGAGTGATTCTCTCTTCACGAAAATTTAGGTTTTCGTTGACCCACCAAGTAAGCGTTGTTCTCAAATGGTATCCTCGACTCCGTACGTAAATGTTTGTTTAAATCATTTTGTTAGCACGTCTTAGGAAATTGCCAATTTGTTGACGGTTTAGACTTTTGAATCTTCTCGTCTTTCTTCCTACAGACAAAATGTCAGGTTGGCCATTCGAGCAACGCTTAAACGCCGTCGACATTTTCCAGGTTACAGATAGAAACCCAATCTAATGTTTATTTATGAAAACTTTTCTTTTTTTGTTCTTTTTTTCATGAATAACAAGAAAGATCGTACCAAACTCCAAACTAGGAACATTAAACTATGTTGTGCTATTCCCTTTGATGGAGAGTGGGGGGAACAAACTATGCAATATCTCTTAAAAGAACCAGCCTTTAAACAGCTCATCAAAACAAGAAACTTCTCTTTATTGCTTCTCCATTTTGATCTTCCTTCATTTTCCCTTCCAAATACACTTTGCAACACCTTCCCTCACCCATGGCTCATAC ATGAAGAAAGAAAACGGCAACTGTGGATCGGGGGTTTCAGGTTCTCGTCGGACGCGGTCTCAAATAGCACCGGAATGGACCGCGGCGGAATGCCTTGTTCTTGTTAATGTGATTGGTGCTGTGGAGGCTGATTGTTTGAAAGCTTTGTCTAGCTATCAGAAATGGAAGATTGTTGCAGAGGACTGCACAGCTTTGAATGTGGCTCGGACTTCGAATCAATGCAGGAAGAAGTGGGAGTGTTTGCTGATTGAACAGGATGTTATCAAGCAATGGGAGTTAACGATGCCGGAGGATGATTCGTATTGGTGTTTAGAGAGTGGAAGGAGAAAAGAATTAGGACTTCCTGACTACTTTGACGAGGAGCTGTTCAAAGCAATTGATAATGTCTCATCAATGAGGGCGAACCAGTCGGATACGGAGCCCGATAACGATCCAGAGGCTGCCGTTGAGAACGCCGATGAAATTTCAGAGCCTGGCCCTAAAAGGCAAAGACGTGGTTCAATGTCTAAGAGAAATCAAGGCCTTGAGAAATCTTTAGAATGTAAAGAAGACGAAGAGGATGAAGCAGAAGAACAACCTCTATTAAGCTCTCCAGAATCAGACCTTCGCGATTGCTACATCAAAAACAACGGAGCAAAGGCGACCGACGACATTGAACCCGAAGAGCAAATGATGGTGAAGAAATTGCTTGAAAATGCAGAAAATGTTCAAGAAATTGTGTCTGAGAATGCAGAATGTGCAACTTCTGATGAAAAGAATGACAAGGACCAAACTAATTTGATAAGACGTCAAGGGAGCAAGCTTATCAGATGCCTAGGAGATTTTCTCAACACCATTAACGATCTCCGTGACCTGCTCGAAGATTGTGAGTGA MKKENGNCGSGVSGSRRTRSQIAPEWTAAECLVLVNVIGAVEADCLKALSSYQKWKIVAEDCTALNVARTSNQCRKKWECLLIEQDVIKQWELTMPEDDSYWCLESGRRKELGLPDYFDEELFKAIDNVSSMRANQSDTEPDNDPEAAVENADEISEPGPKRQRRGSMSKRNQGLEKSLECKEDEEDEAEEQPLLSSPESDLRDCYIKNNGAKATDDIEPEEQMMVKKLLENAENVQEIVSENAECATSDEKNDKDQTNLIRRQGSKLIRCLGDFLNTINDLRDLLEDCE Homology
BLAST of Cp4.1LG06g04720 vs. ExPASy Swiss-Prot
Match: Q8VZ20 (Trihelix transcription factor ASR3 OS=Arabidopsis thaliana OX=3702 GN=ASR3 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 9.8e-09 Identity = 75/300 (25.00%), Postives = 125/300 (41.67%), Query Frame = 0
BLAST of Cp4.1LG06g04720 vs. NCBI nr
Match: XP_023535171.1 (trihelix transcription factor ASR3-like [Cucurbita pepo subsp. pepo] >XP_023535172.1 trihelix transcription factor ASR3-like [Cucurbita pepo subsp. pepo] >XP_023535173.1 trihelix transcription factor ASR3-like [Cucurbita pepo subsp. pepo] >XP_023535174.1 trihelix transcription factor ASR3-like [Cucurbita pepo subsp. pepo] >XP_023535175.1 trihelix transcription factor ASR3-like [Cucurbita pepo subsp. pepo] >XP_023535261.1 trihelix transcription factor ASR3-like [Cucurbita pepo subsp. pepo] >XP_023535262.1 trihelix transcription factor ASR3-like [Cucurbita pepo subsp. pepo] >XP_023535263.1 trihelix transcription factor ASR3-like [Cucurbita pepo subsp. pepo] >XP_023535264.1 trihelix transcription factor ASR3-like [Cucurbita pepo subsp. pepo] >XP_023535265.1 trihelix transcription factor ASR3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 575 bits (1483), Expect = 5.69e-207 Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
BLAST of Cp4.1LG06g04720 vs. NCBI nr
Match: XP_022936888.1 (trihelix transcription factor ASR3-like [Cucurbita moschata] >XP_022936889.1 trihelix transcription factor ASR3-like [Cucurbita moschata] >XP_022936890.1 trihelix transcription factor ASR3-like [Cucurbita moschata] >XP_022936892.1 trihelix transcription factor ASR3-like [Cucurbita moschata]) HSP 1 Score: 559 bits (1440), Expect = 2.04e-200 Identity = 285/290 (98.28%), Postives = 285/290 (98.28%), Query Frame = 0
BLAST of Cp4.1LG06g04720 vs. NCBI nr
Match: XP_022976249.1 (trihelix transcription factor ASR3-like [Cucurbita maxima] >XP_022976250.1 trihelix transcription factor ASR3-like [Cucurbita maxima] >XP_022976251.1 trihelix transcription factor ASR3-like [Cucurbita maxima] >XP_022976252.1 trihelix transcription factor ASR3-like [Cucurbita maxima]) HSP 1 Score: 551 bits (1421), Expect = 1.61e-197 Identity = 280/290 (96.55%), Postives = 284/290 (97.93%), Query Frame = 0
BLAST of Cp4.1LG06g04720 vs. NCBI nr
Match: KAG7024524.1 (putative LRR receptor-like serine/threonine-protein kinase [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 558 bits (1437), Expect = 1.07e-191 Identity = 284/290 (97.93%), Postives = 285/290 (98.28%), Query Frame = 0
BLAST of Cp4.1LG06g04720 vs. NCBI nr
Match: KAG6591641.1 (Pollen receptor-like kinase 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 558 bits (1437), Expect = 7.33e-191 Identity = 284/290 (97.93%), Postives = 285/290 (98.28%), Query Frame = 0
BLAST of Cp4.1LG06g04720 vs. ExPASy TrEMBL
Match: A0A6J1FEH7 (trihelix transcription factor ASR3-like OS=Cucurbita moschata OX=3662 GN=LOC111443343 PE=4 SV=1) HSP 1 Score: 559 bits (1440), Expect = 9.89e-201 Identity = 285/290 (98.28%), Postives = 285/290 (98.28%), Query Frame = 0
BLAST of Cp4.1LG06g04720 vs. ExPASy TrEMBL
Match: A0A6J1IN02 (trihelix transcription factor ASR3-like OS=Cucurbita maxima OX=3661 GN=LOC111476700 PE=4 SV=1) HSP 1 Score: 551 bits (1421), Expect = 7.79e-198 Identity = 280/290 (96.55%), Postives = 284/290 (97.93%), Query Frame = 0
BLAST of Cp4.1LG06g04720 vs. ExPASy TrEMBL
Match: A0A0A0LDW0 (Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G882960 PE=4 SV=1) HSP 1 Score: 445 bits (1144), Expect = 2.62e-155 Identity = 239/311 (76.85%), Postives = 261/311 (83.92%), Query Frame = 0
BLAST of Cp4.1LG06g04720 vs. ExPASy TrEMBL
Match: A0A1S3CQW8 (trihelix transcription factor ASR3 OS=Cucumis melo OX=3656 GN=LOC103503736 PE=4 SV=1) HSP 1 Score: 432 bits (1111), Expect = 2.76e-150 Identity = 232/311 (74.60%), Postives = 260/311 (83.60%), Query Frame = 0
BLAST of Cp4.1LG06g04720 vs. ExPASy TrEMBL
Match: A0A6J1J3M2 (trihelix transcription factor ASR3 OS=Cucurbita maxima OX=3661 GN=LOC111481039 PE=4 SV=1) HSP 1 Score: 426 bits (1095), Expect = 4.56e-148 Identity = 223/297 (75.08%), Postives = 251/297 (84.51%), Query Frame = 0
BLAST of Cp4.1LG06g04720 vs. TAIR 10
Match: AT4G31270.1 (sequence-specific DNA binding transcription factors ) HSP 1 Score: 167.2 bits (422), Expect = 2.0e-41 Identity = 110/292 (37.67%), Postives = 168/292 (57.53%), Query Frame = 0
BLAST of Cp4.1LG06g04720 vs. TAIR 10
Match: AT2G33550.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 62.4 bits (150), Expect = 7.0e-10 Identity = 75/300 (25.00%), Postives = 125/300 (41.67%), Query Frame = 0
BLAST of Cp4.1LG06g04720 vs. TAIR 10
Match: AT2G35640.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 45.1 bits (105), Expect = 1.1e-04 Identity = 38/147 (25.85%), Postives = 60/147 (40.82%), Query Frame = 0
BLAST of Cp4.1LG06g04720 vs. TAIR 10
Match: AT1G31310.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 44.7 bits (104), Expect = 1.5e-04 Identity = 25/103 (24.27%), Postives = 42/103 (40.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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