Cp4.1LG06g04680 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g04680
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ribosomal RNA small subunit methyltransferase H
Location	Cp4.1LG06: 2147587 .. 2152039 (-)
RNA-Seq Expression	Cp4.1LG06g04680
Synteny	Cp4.1LG06g04680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACTGGCTTTTAGATCTTCAATGGCGATGCTCTCGTTGTTTTCTTTTTCTCCGTTTACAGCATTTGGTCTTCATCTCTACTGCTTCACTGCCGAGAATCTTCCGGTGCTGTTCCATTTCTACCGCTACTGATTTCAAGTAAGGCAAGGAAGTAGAAGCAGAAGAAATCCAAGAATCTTAAGGCGAATACCTCTGTTTCGAAATCATCGGAGTCTTCTTCTTTATCTTCGAAGTTAGCTTTGGTGAAGGAGAAAAGGACTCGCTCCACCAAGGAGTTTGATGAGATCACTGTCCAGTTCGGCGACACTGCTGCTCACATCCCGGTGACGCTTTTGGAAGTATTGGACGTATGCTCTGCTTCTTCCGGAAGGCCGCTATGCTCCTTTGTAGATTGCACCGTCGGTGCAGGTGAACATTCCTTAGCTGTTAGTCTCTGTCTTAACATGTTTGCTTTCTTGTCCTGTTCGTCGTTAATGATTGATTCGGTGCATTTTTGGTTAACAATTATTATTCGAATGTGTTTTATGATTGTATTTCTCGAGTAGTTCCGTGCCTTCTCGTCAAATTTTCTGAAATATGTTATTATTCGTGTATATATGCAGCCGGATTAGATGCTCATCCAAATTCCTATCAAAATTTACAATCAATGAGCAGTATAATGTGCGCTGATTTGTATATTGAATTCTGTATTGTGTTCTATGTGGAGCTACATCTGGCCATAGTAGCGATCGATCTTATCTACGTGCTTCTTTCTTTACTATTGTTTCGCCTGCGAAATTTTGGATTAACTTGCAGTCTGTCATCCTGTGTCGTTCCTTTGATGTTGTTGCACGAGAATTTGGAATGAGTGCGGCTTTTGACACAACGCACTTTGATAACTGCTCTTTTCTGTGGCTGTATTCGCTCTCTTAGCATTTTCTGTCCGAGTTGATTTTTCTTTTTCATGATGTTCAATTCTGATTTCGTGTCCTGGAAAACAGATAATTCAAGCACATCCAGAGTTGAAATTTTACTTGCAAATGGAAGTCATACAATTGCACTTCATAAGGCCGAAGATCGGATTAGTGCTTTCTTCAGCGAGGATTCTGATTTGAAGGCATTCGTACTTCTGAAGAACTGTAAATACATGAAATCGCTACTGGCTGACTCAGACGAGAAACCTGTAGATCCTGGAGTTGACGGAATTTTGATGTATTTAGGAATGTCATCCATGCAGGTAAATCAAAGAGAATGCACAGATTTTTAAAATATTTAGCTCAGTCTGTGATGAGGTTCAAGGAACAGTTCTATTAAAATAGTGGAGAGAGTAAACCTGTATGCTAGTACATGTAAGGTGCTAATGGAAATACAAGGCAAAAACAGAGTGAACAACATAAAATATATAGAAACAATTGTAGAATGCCAAGTTACTGTTATTTAATATCACAGTTGGGATCCAATGTATGAGTAGTACGGTCCATTTTCTTTACAGGGAAAATCATGATAACAGTTAACAAAGCTATCTTTCCAGATACCTCATTGATTCATCCCACCATAGAGTTTATGAGATTTAATTTCTCGCATAGAATGTAATCTTTTAACAGCCTGAAATTTGGCAATTTTCCAGGCTGCTTAGGTGGACGATCCTGAAAGGGGAATTAGTGTCTTTGGTGATGAACCTCTTGATATGTGAATGGATCCTCAGGTACAAACTGGTTTAATAAATTAGTAGATAATGTATGAGTCCGTTTCTAGCTATTCCATTGTTTATGCTTGATATATTGTTACTTTCCGAAGCAACTATAAGCTATTCTTTACGTTTTTCCTTTGTAGTTAAACTGATTCATCCATGCGGGCAAATTTTCTTACAAAAACGTAAAACGATGATAATTTATGTTGTGAGTGTCATGTTTGGGTGTACGCGTGCACTTATTTTATTTCATTCTGCGCATGCTGAATTAGAAGTGCTTTTACTGTTACATGCTTATTGCTTTGATATATTGTGTTACCGAAGAATATTTCTGTTACTGTTTGTTGGACCGCCTGCAGATTACTGATTTTCCTTCTAACTGGTCCTTTGTTCTTTTTATGGCTGGATGTAACGGTACAGTCCTTCCCAATCCCACAAGGCCACCACCCATTCTCAAAAAGGAGGGGGGAAAAGGCATTTGGGGGGGTGTACATGTAGCGTTTATTATTGAATTTTCTTCGGCCAGTTGAAAAATGCGGCTCGTTCATGGTCTTCTGTAGAAATTAATGACTTAATTATTTATGTTGCTTCCCTGCTGATTGAAACAGGATTATGGCAGGCAAGTCTAATGGCAGAGGACATTCTTAACAGTTGGCCGGAAATAGAAGTGGGACGTGATCTTGCGGGTTTATGGAGAATAAAGTAACTGGTATTCACTCCAGAATAAGATCGTAAAAGCTCGATCACAGGGGGGTGGACTGCATTCCTCCGGTGAATTAGTTGATCTTCTTATCCGAAAATCCACTTTGGGCTGAAAAGGTAAGCACTGCTCGTTCTTTGAGTCATGCCTTCATTGATTTTGTTTCTTCTTCTTTTTTCGCGTCTGAGCCACATCGATCTTTGTTTATTATTGTTCCTTGTCATATCAATCATGATTGTCGTCTCTCTATGAATTTGAGGTCCTTTTCTTTTCACCCCGACCTTTGTAATTTCATATCATTTCATCTTTGTTCAATTGAAGGCTAACGTGTCAATAAATTACATATAAGGACTTGCTTGAAAATAAGTTAAAAGATCATTTTCTTACATTGTTATGAATATGTGGTGTAAAATTTAATGGAAATAGAAGGATATTCCAAGCTCTGAGGATTGCTGTTGATGATTGACTGAAGGTATTAGAAGACGCGGCCCTGTATACATATCATTTCTATCCACAGTTTGGAGGGTAGGGTTGTGAAGCAAACATTTCTGGATATCATAATCCCGAAAACCGAAGGAGATGACTGATCTATAGGAAGAAGAGAGGTTGAATCGGCGCTGTAGGAATGCTATGCTAAGCTCAAGGTAATTCGGAAGAATAATGTTTTGTCTTCTGATGGGAAACCAGTGAGTGTGCGGACTTCATTATTATGGCCATCTGGTAGGGTGCACATCAAGGTTAGTACCAGTCACATCTATTTCCTTTTCATGAACGACTCTTCTCTCTCTACGTTTATATACACTTTTCTAATTTCATTTTATTTTTATTTTTTCGACTATCAGTTCGTTTGAAATTTGCTTATTTTTCTAACATGCTTAGAAGAATCAATTCCATTTCATTTTTTAAGATTAACTGGATTTTTTTTTTCTTTTCTTTTTCAAAAAACTGGATTTTGTTTTCTATCTTTAAAAATTGCGCTTGAATTTTTAAAACTAAGCTTATAAACACCATTTAAGCTTGTTTTTAAAATTTATCTAAGAATTCAAACATTGAAAATCACACCAAAAAGAAAGTTCAAAAAACAAGAGATTAAAAATGAAACAATTAAATTTTCATTTTACGCTTTAGTTTCCAAAAGTAGATTTTTTCGCCCCTTAAATCTGTCGCTAACTTGTAAGTTTGTATAGTAATAACTATTTCAGTGCCTTCATTTTATTTTAATAGCAGAATAGAAAACGTTGTCATCGAACAAGATAAAATATAAAAATTATGGTTTACGTTATAGTTCATTTTTTCAGTTATAAAATATTTTAATCATCCAAGTCAATTTTTTTAAAAACGAAATTATTTTATCACAAAATGAGTTAGGGAAAGAATGTATGAGGAAGAGTTGCCAAAAATAGAGTACTAATATGGAATTATATTCATGAGAAATCTCCTCTTAGAGATTCTTTTCTGCTCTTTACAGGCCAGTCAGCGAATCTGCACAACATCCCCTTGAAACGTTGGGAAATGGTTTCCCAGATAAAACTACCTGAAGGGGACACAGACGATCAATGTTAGTTGATAGAGTATGCAGCCAGCAATGGATAATCAAAAACTAATTATTCCTCATAATGCAATTGTTGCAAACGAATGTAAAATGCTATTGTTCTTGTAAACTCTATAAGTTGGAAACAAACTAAATGGGAATGAAATCAGATACCTGAGTGGAATGATGGTTGAAAAATCCGGTAATCAACTTATGGTGCCGCTTCGACAATAGTTCTAGTGCCTTTTCAAAATCCAGTAATCAACCTCAGATATCTGTTTGATCTTGAGAAAATGACCAATATAATTACATGGGGGTACTTAATATGGCCGCTTTGACAGACTCCCCAAACCATCGTCCAAGCGCGCATTTGGTGAAGGCAACGTACTCCTAAATGAACAGAAAATACCAATTTCAACGTCATAAGATATAAGATATAGATAGTAGCTAACTCAACTCAGGTATGAGAACATACAAAATGTCAAGTACAATTGATAACTGACCGTGGTGCTCGCAAAGCCAGACGAAATGCGTTCCACAAATCCCAAGAATC

mRNA sequence

GAACTGGCTTTTAGATCTTCAATGGCGATGCTCTCGTTGTTTTCTTTTTCTCCGTTTACAGCATTTGGTCTTCATCTCTACTGCTTCACTGCCGAGAATCTTCCGAAGCAGAAGAAATCCAAGAATCTTAAGGCGAATACCTCTGTTTCGAAATCATCGGAGTCTTCTTCTTTATCTTCGAAGTTAGCTTTGGTGAAGGAGAAAAGGACTCGCTCCACCAAGGAGTTTGATGAGATCACTGTCCAGTTCGGCGACACTGCTGCTCACATCCCGGTGACGCTTTTGGAAGTATTGGACGTATGCTCTGCTTCTTCCGGAAGGCCGCTATGCTCCTTTGTAGATTGCACCGTCGGTGCAGATAATTCAAGCACATCCAGAGTTGAAATTTTACTTGCAAATGGAAGTCATACAATTGCACTTCATAAGGCCGAAGATCGGATTAGTGCTTTCTTCAGCGAGGATTCTGATTTGAAGGCATTCGTACTTCTGAAGAACTGTAAATACATGAAATCGCTACTGGCTGACTCAGACGAGAAACCTGTAGATCCTGGAGTTGACGGAATTTTGATGTATTTAGGAATGTCATCCATGCAGGTGGACGATCCTGAAAGGGGAATTAGTGTCTTTGGTGATGAACCTCTTGATATTAACTGGTATTCACTCCAGAATAAGATCGTAAAAGCTCGATCACAGGGGGGTGGACTGCATTCCTCCGGCCAGTCAGCGAATCTGCACAACATCCCCTTGAAACGTTGGGAAATGGTTTCCCAGATAAAACTACCTGAAGGGGACACAGACGATCAATGTTAGTTGATAGAGTATGCAGCCAGCAATGGATAATCAAAAACTAATTATTCCTCATAATGCAATTGTTGCAAACGAATGTAAAATGCTATTGTTCTTGTAAACTCTATAAGTTGGAAACAAACTAAATGGGAATGAAATCAGATACCTGAGTGGAATGATGGTTGAAAAATCCGGTAATCAACTTATGGTGCCGCTTCGACAATAGTTCTAGTGCCTTTTCAAAATCCAGTAATCAACCTCAGATATCTGTTTGATCTTGAGAAAATGACCAATATAATTACATGGGGGTACTTAATATGGCCGCTTTGACAGACTCCCCAAACCATCGTCCAAGCGCGCATTTGGTGAAGGCAACGTACTCCTAAATGAACAGAAAATACCAATTTCAACGTCATAAGATATAAGATATAGATAGTAGCTAACTCAACTCAGGTATGAGAACATACAAAATGTCAAGTACAATTGATAACTGACCGTGGTGCTCGCAAAGCCAGACGAAATGCGTTCCACAAATCCCAAGAATC

Coding sequence (CDS)

GAACTGGCTTTTAGATCTTCAATGGCGATGCTCTCGTTGTTTTCTTTTTCTCCGTTTACAGCATTTGGTCTTCATCTCTACTGCTTCACTGCCGAGAATCTTCCGAAGCAGAAGAAATCCAAGAATCTTAAGGCGAATACCTCTGTTTCGAAATCATCGGAGTCTTCTTCTTTATCTTCGAAGTTAGCTTTGGTGAAGGAGAAAAGGACTCGCTCCACCAAGGAGTTTGATGAGATCACTGTCCAGTTCGGCGACACTGCTGCTCACATCCCGGTGACGCTTTTGGAAGTATTGGACGTATGCTCTGCTTCTTCCGGAAGGCCGCTATGCTCCTTTGTAGATTGCACCGTCGGTGCAGATAATTCAAGCACATCCAGAGTTGAAATTTTACTTGCAAATGGAAGTCATACAATTGCACTTCATAAGGCCGAAGATCGGATTAGTGCTTTCTTCAGCGAGGATTCTGATTTGAAGGCATTCGTACTTCTGAAGAACTGTAAATACATGAAATCGCTACTGGCTGACTCAGACGAGAAACCTGTAGATCCTGGAGTTGACGGAATTTTGATGTATTTAGGAATGTCATCCATGCAGGTGGACGATCCTGAAAGGGGAATTAGTGTCTTTGGTGATGAACCTCTTGATATTAACTGGTATTCACTCCAGAATAAGATCGTAAAAGCTCGATCACAGGGGGGTGGACTGCATTCCTCCGGCCAGTCAGCGAATCTGCACAACATCCCCTTGAAACGTTGGGAAATGGTTTCCCAGATAAAACTACCTGAAGGGGACACAGACGATCAATGTTAG

Protein sequence

ELAFRSSMAMLSLFSFSPFTAFGLHLYCFTAENLPKQKKSKNLKANTSVSKSSESSSLSSKLALVKEKRTRSTKEFDEITVQFGDTAAHIPVTLLEVLDVCSASSGRPLCSFVDCTVGADNSSTSRVEILLANGSHTIALHKAEDRISAFFSEDSDLKAFVLLKNCKYMKSLLADSDEKPVDPGVDGILMYLGMSSMQVDDPERGISVFGDEPLDINWYSLQNKIVKARSQGGGLHSSGQSANLHNIPLKRWEMVSQIKLPEGDTDDQC

Homology

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BLAST of Cp4.1LG06g04680 vs. ExPASy Swiss-Prot
Match: B2IGF2 (Ribosomal RNA small subunit methyltransferase H OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIMB 8712) OX=395963 GN=rsmH PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.0e-09
Identity = 44/144 (30.56%), Postives = 73/144 (50.69%), Query Frame = 0


Query: 77  DEITVQFGDTAAHIPVTLLEVLDVCSASSGRPLCSFVDCTVGADNSSTSRVEILLANGSH 136
           DE  +  G  A H+PV   EV+       G     ++D T GA   + +   +L    +H
Sbjct: 7   DESPLAAGGPARHVPVLREEVVAALDCKKGG---FYLDATFGAGGYTRA---LLAEPETH 66

Query: 137 TIALHKAEDRISAFFSEDSDLKAFVLLKNCKYMKSLLADSDEKPVDPGVDGILMYLGMSS 196
            +A+ +  + I+A  + +++    ++L + ++  S LAD       P  DGI+  +G+SS
Sbjct: 67  VLAIDRDPEAIAAGRALEAESAGRLILAHGRF--STLADIAAAEGIPAFDGIVFDIGVSS 126

Query: 197 MQVDDPERGISVFGDEPLDINWYS 221
           MQ+D PERG S  G+ PLD+   S
Sbjct: 127 MQLDQPERGFSFRGEGPLDMRMES 142

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BLAST of Cp4.1LG06g04680 vs. ExPASy Swiss-Prot
Match: Q2RK87 (Ribosomal RNA small subunit methyltransferase H OS=Moorella thermoacetica (strain ATCC 39073 / JCM 9320) OX=264732 GN=rsmH PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.0e-09
Identity = 46/128 (35.94%), Postives = 66/128 (51.56%), Query Frame = 0


Query: 89  HIPVTLLEVLDVCSASSGRPLCSFVDCTVGADNSSTSRVEILLANGSHTIALHKAEDRIS 148
           H PV L EVL +     G     FVD TVG    S + +  LL  G H + L +  + ++
Sbjct: 5   HQPVLLTEVLHLLDPQPGE---FFVDATVGGGGHSRAILPRLLP-GGHLLGLDRDAEAVA 64

Query: 149 AFFSEDSDLKAFVLLKNCKYMKSLLADSDEKPVDPGVDGILMYLGMSSMQVDDPERGISV 208
           A     +   A V +    + + L A  + + + PGVDG+L  LG+SS Q+D+PERG S 
Sbjct: 65  AARERLAAFGANVEIVQANF-RDLAAILEARGI-PGVDGLLFDLGVSSYQLDNPERGFSY 124

Query: 209 FGDEPLDI 217
             D PLD+
Sbjct: 125 QVDAPLDM 126

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BLAST of Cp4.1LG06g04680 vs. ExPASy Swiss-Prot
Match: C6D563 (Ribosomal RNA small subunit methyltransferase H OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=rsmH PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.6e-08
Identity = 48/137 (35.04%), Postives = 68/137 (49.64%), Query Frame = 0


Query: 89  HIPVTLLEVLDVCSASSGRPLCSFVDCTVGADNSSTSRVEILLANGSHTI-------ALH 148
           HI V L E +D  +   G     +VDCT+G    S  R+   L+ G   I       AL 
Sbjct: 4   HITVLLEEAVDGLAIKPGG---IYVDCTLGGAGHS-ERIVSQLSGGGRLIAFDQDDAALD 63

Query: 149 KAEDRISAFFSEDSDLKAFVLLKNCKYMKSLLADSDEKPVD--PGVDGILMYLGMSSMQV 208
            A  R++ +    + +K+     N +Y++ +L   D   VD  P VDGIL  LG+SS Q+
Sbjct: 64  NARVRLAPYMDRVTLVKS-----NFRYLEEMLLTCDVPTVDGVPQVDGILFDLGVSSPQL 123

Query: 209 DDPERGISVFGDEPLDI 217
           D+ ERG S   D PLD+
Sbjct: 124 DEAERGFSYNHDAPLDM 131

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BLAST of Cp4.1LG06g04680 vs. ExPASy Swiss-Prot
Match: B2V4W0 (Ribosomal RNA small subunit methyltransferase H OS=Clostridium botulinum (strain Alaska E43 / Type E3) OX=508767 GN=rsmH PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07
Identity = 49/131 (37.40%), Postives = 65/131 (49.62%), Query Frame = 0


Query: 89  HIPVTLLEVLDVCSASSGRPLCSFVDCTVGADNSSTSRVEILLANGSHTIALHKAEDRIS 148
           HI V L E LD            +VDCT+G    S+  +E  L+N    I + +  D + 
Sbjct: 5   HISVLLNECLDALDIKDNG---IYVDCTLGGAGHSSHILE-RLSNEGLLIGIDQDRDALK 64

Query: 149 AFFSEDSDLKAFVLLKNCKYMKSLLADSDE--KPVD-PGVDGILMYLGMSSMQVDDPERG 208
           A       LK F   +N KY+ S   D D   + +D P VDGILM LG+SS Q+D+  RG
Sbjct: 65  A---AKERLKRF---ENVKYVHSNFYDIDNILQNLDIPKVDGILMDLGVSSYQLDEGARG 124

Query: 209 ISVFGDEPLDI 217
            S   D PLD+
Sbjct: 125 FSYMKDAPLDM 125

[Close]

BLAST of Cp4.1LG06g04680 vs. ExPASy Swiss-Prot
Match: B2TS30 (Ribosomal RNA small subunit methyltransferase H OS=Clostridium botulinum (strain Eklund 17B / Type B) OX=935198 GN=rsmH PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07
Identity = 49/131 (37.40%), Postives = 65/131 (49.62%), Query Frame = 0


Query: 89  HIPVTLLEVLDVCSASSGRPLCSFVDCTVGADNSSTSRVEILLANGSHTIALHKAEDRIS 148
           HI V L E LD            +VDCT+G    S+  +E  L+N    I + +  D + 
Sbjct: 5   HISVLLNECLDALDIKDNG---IYVDCTLGGAGHSSHILE-RLSNEGLLIGIDQDRDALK 64

Query: 149 AFFSEDSDLKAFVLLKNCKYMKSLLADSDE--KPVD-PGVDGILMYLGMSSMQVDDPERG 208
           A       LK F   +N KY+ S   D D   + +D P VDGILM LG+SS Q+D+  RG
Sbjct: 65  A---AKERLKRF---ENVKYVHSNFYDIDNILQNLDIPKVDGILMDLGVSSYQLDEGARG 124

Query: 209 ISVFGDEPLDI 217
            S   D PLD+
Sbjct: 125 FSYMKDAPLDM 125

[Close]

BLAST of Cp4.1LG06g04680 vs. NCBI nr
Match: KAG6591615.1 (hypothetical protein SDJN03_13961, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024497.1 hypothetical protein SDJN02_13313, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 294 bits (753), Expect = 3.37e-97
Identity = 159/198 (80.30%), Postives = 163/198 (82.32%), Query Frame = 0


Query: 1   ELAFRSSMAMLSLFSFSPFTAFGLHLYCFTAENLPKQKKSKNLKANTSVSKSSESSSLSS 60
           E+AFRSSMA LSLFSFSPFTAFGLHLYCFTAENLP                         
Sbjct: 18  EMAFRSSMAKLSLFSFSPFTAFGLHLYCFTAENLP------------------------- 77

Query: 61  KLALVKEKRTRSTKEFDEITVQFGDTAAHIPVTLLEVLDVCSASSGRPLCSFVDCTVGAD 120
            LALVKEKRTRSTKEFDEI VQFGDTAAHIPVTL EVLDV SASSGRPLCSFVDCTVGAD
Sbjct: 78  -LALVKEKRTRSTKEFDEIAVQFGDTAAHIPVTLSEVLDVFSASSGRPLCSFVDCTVGAD 137

Query: 121 NSSTSRVEILLANGSHTIALHKAEDRISAFFSEDSDLKAFVLLKNCKYMKSLLADSDEKP 180
           NSSTSRVEILL NGS  IALHKAEDRISAFFSEDSDL AF++LKN KYMKSLLADSDEKP
Sbjct: 138 NSSTSRVEILLENGSRPIALHKAEDRISAFFSEDSDLNAFIVLKNFKYMKSLLADSDEKP 189

Query: 181 VDPGVDGILMYLGMSSMQ 198
           +DPGVDGILMYLGMSSMQ
Sbjct: 198 LDPGVDGILMYLGMSSMQ 189

[Close]

BLAST of Cp4.1LG06g04680 vs. NCBI nr
Match: XP_038896155.1 (ribosomal RNA small subunit methyltransferase H [Benincasa hispida])

HSP 1 Score: 278 bits (712), Expect = 8.12e-88
Identity = 174/306 (56.86%), Postives = 196/306 (64.05%), Query Frame = 0


Query: 1   ELAFRSSMAMLSLFSFSPFTAFGLHLYCFTAENLP----------------------KQK 60
           E+AFRSSMA  SLFS+SP  +       FT    P                      K+K
Sbjct: 7   EMAFRSSMAKFSLFSYSPSQSLRFQHSLFTCTTPPVRIFRCCSIATAADVKNKAKKEKKK 66

Query: 61  KSKNLKANTSVSKSSESSSLSSKLALVKEKR-TRSTKEFDEITVQFGDTAAHIPVTLLEV 120
            SKNLKA+TSVSKSSESSSLSSKLALVKEKR TRSTK+FDE  +Q GDTAAHIPV L EV
Sbjct: 67  NSKNLKASTSVSKSSESSSLSSKLALVKEKRRTRSTKKFDENAIQVGDTAAHIPVMLAEV 126

Query: 121 LDVCSASSGRPLCSFVDCTVGADNSSTSRVE------ILLANGSHTIALHKAEDRISAFF 180
           LDV S SSGRPL SFVDCTVGA   S++ ++        +      IAL KA+DRISA F
Sbjct: 127 LDVFSGSSGRPLRSFVDCTVGAGGHSSAIIQAHAELKFYMGMDVDPIALDKAQDRISALF 186

Query: 181 SEDSDLKAFVLLKNCKYMKSLLADSDEKPVDPGVDGILMYLGMSSMQVDDPERGISVFGD 240
           SEDSDLKA+++LKN KY+KSLLADSDEKP+DPGVDGILM LGMSSMQVDDPERG  V GD
Sbjct: 187 SEDSDLKAYIVLKNFKYVKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFGVLGD 246

Query: 241 EPLDI---------------------------------NWYSLQNKIVKARSQGGGLHSS 244
            PLD+                                 NWYSLQNKIVKARSQGG LHS+
Sbjct: 247 GPLDMRMDPQASLKAEDILNSWPEIEVGRILRVYGEESNWYSLQNKIVKARSQGG-LHST 306

[Close]

BLAST of Cp4.1LG06g04680 vs. NCBI nr
Match: XP_031739414.1 (uncharacterized protein LOC101221749 [Cucumis sativus] >KGN60150.1 hypothetical protein Csa_002039 [Cucumis sativus])

HSP 1 Score: 270 bits (690), Expect = 1.35e-84
Identity = 170/305 (55.74%), Postives = 195/305 (63.93%), Query Frame = 0


Query: 2   LAFRSSMAMLSLFSFSPFTAFGLHLYCFTAENLP----------------------KQKK 61
           +AFRSS+A  SLFS S   +     + FT    P                      KQKK
Sbjct: 1   MAFRSSIAKFSLFSSSSSQSLHFQHFFFTCTTPPPRIFRFCSISTASGVKNKAKKEKQKK 60

Query: 62  SKNLKANTSVSKSSESSSLSSKLALVKEKR-TRSTKEFDEITVQFGDTAAHIPVTLLEVL 121
           SKNLKA+TSVSKSSES+SLSSKLALVKEKR TRSTKEFDE  +  GDTAAHIPV L EVL
Sbjct: 61  SKNLKASTSVSKSSESASLSSKLALVKEKRRTRSTKEFDENAIPIGDTAAHIPVMLAEVL 120

Query: 122 DVCSASSGRPLCSFVDCTVGADNSSTSRVE------ILLANGSHTIALHKAEDRISAFFS 181
           DV ++SSGRPL SFVDCTVGA   S++ ++        +      IAL KA+DRIS FFS
Sbjct: 121 DVFASSSGRPLRSFVDCTVGAGGHSSAIIQAHPELNFYMGMDVDPIALDKAQDRISDFFS 180

Query: 182 EDSDLKAFVLLKNCKYMKSLLADSDEKPVDPGVDGILMYLGMSSMQVDDPERGISVFGDE 241
           EDSDLKA+++LKN KY+KSLLADSDEKP+DPGVDG++M LGMSSMQVDDPERG  V GD 
Sbjct: 181 EDSDLKAYIVLKNFKYVKSLLADSDEKPLDPGVDGMMMDLGMSSMQVDDPERGFRVLGDG 240

Query: 242 PLDI---------------------------------NWYSLQNKIVKARSQGGGLHSSG 244
           PLD+                                 NWYSLQNKIVKARSQGG LHS+ 
Sbjct: 241 PLDMRMDPQASLKAEDILNNWPETEVGRILRVYGEESNWYSLQNKIVKARSQGG-LHSTT 300

[Close]

BLAST of Cp4.1LG06g04680 vs. NCBI nr
Match: XP_008466336.1 (PREDICTED: ribosomal RNA small subunit methyltransferase H [Cucumis melo] >KAA0038770.1 ribosomal RNA small subunit methyltransferase H [Cucumis melo var. makuwa] >TYK31385.1 ribosomal RNA small subunit methyltransferase H [Cucumis melo var. makuwa])

HSP 1 Score: 269 bits (687), Expect = 3.32e-84
Identity = 173/305 (56.72%), Postives = 195/305 (63.93%), Query Frame = 0


Query: 2   LAFRSSMAMLSLFSFSPFTAFGLHLYCFTAENLP----------------------KQKK 61
           +AFRSS+A  SLFS S  +    HL+ FT    P                      K KK
Sbjct: 1   MAFRSSIAKFSLFSSSSQSLHFHHLF-FTCTTPPPRIFRFCSISTASGVKNKTKKEKHKK 60

Query: 62  SKNLKANTSVSKSSESSSLSSKLALVKEKR-TRSTKEFDEITVQFGDTAAHIPVTLLEVL 121
           SKNLKA+T VSKSSES+SLSSKLALVKEKR TRSTKEFDE  +  GDTAAHIPV L EVL
Sbjct: 61  SKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDENAIPIGDTAAHIPVMLAEVL 120

Query: 122 DVCSASSGRPLCSFVDCTVGADNSSTSRVE------ILLANGSHTIALHKAEDRISAFFS 181
           DV S+SSGRPL SFVDCTVGA   S++ ++        +      IAL KA+DRIS FFS
Sbjct: 121 DVFSSSSGRPLRSFVDCTVGAGGHSSAIIQAHPELNFYMGMDVDPIALDKAQDRISDFFS 180

Query: 182 EDSDLKAFVLLKNCKYMKSLLADSDEKPVDPGVDGILMYLGMSSMQVDDPERGISVFGDE 241
           EDSDLKA+++LKN KY+KSLLADSDEKP+DPGVDGILM LGMSSMQVDDPERG  V GD 
Sbjct: 181 EDSDLKAYIVLKNFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDG 240

Query: 242 PLDI---------------------------------NWYSLQNKIVKARSQGGGLHSSG 244
           PLD+                                 NWYSLQNKIVKARSQGG LHS+ 
Sbjct: 241 PLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGG-LHSTT 300

[Close]

BLAST of Cp4.1LG06g04680 vs. NCBI nr
Match: KAG7037555.1 (rsmH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 266 bits (681), Expect = 3.41e-83
Identity = 173/304 (56.91%), Postives = 194/304 (63.82%), Query Frame = 0


Query: 2   LAFRSSMAMLSLFSFSPFTAFGL-HLYCFTAENLP--------------------KQKKS 61
           +AFRSSM  LSLFS SP  +F L +L    A   P                    KQKK+
Sbjct: 1   MAFRSSMLKLSLFSSSPSQSFRLRYLISTCATPAPSIFRCCSISTATDGNKVKKAKQKKT 60

Query: 62  KNLKANTSVSKSSESSSLSSKLALVKEKR-TRSTKEFDEITVQFGDTAAHIPVTLLEVLD 121
           KN+KA+T+V KSSESSS S KLALVKEKR TRSTKEFDE  VQFGDTAAHIPV L EVLD
Sbjct: 61  KNVKASTAVPKSSESSSSSLKLALVKEKRRTRSTKEFDEKAVQFGDTAAHIPVMLAEVLD 120

Query: 122 VCSASSGRPLCSFVDCTVGADNSSTSRVE------ILLANGSHTIALHKAEDRISAFFSE 181
           V SASSGRPL SFVDCTVGA   S++ ++        +      IAL KA+DRIS  F E
Sbjct: 121 VFSASSGRPLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISDLFCE 180

Query: 182 DSDLKAFVLLKNCKYMKSLLADSDEKPVDPGVDGILMYLGMSSMQVDDPERGISVFGDEP 241
           DSDLKA+ +LKN KYMKSLLADSDEKP+DPGVDGILM LGMSSMQVDDPERG SV  D P
Sbjct: 181 DSDLKAYTVLKNFKYMKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFSVLCDGP 240

Query: 242 LDI---------------------------------NWYSLQNKIVKARSQGGGLHSSGQ 244
           LD+                                 NWYSLQNKIVKARSQGG LH++ +
Sbjct: 241 LDMRMDPQASLKAEDILNSWPEIEVGRVLRVYGEESNWYSLQNKIVKARSQGG-LHTTSE 300

[Close]

BLAST of Cp4.1LG06g04680 vs. ExPASy TrEMBL
Match: A0A0A0LDT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881630 PE=3 SV=1)

HSP 1 Score: 270 bits (690), Expect = 6.55e-85
Identity = 170/305 (55.74%), Postives = 195/305 (63.93%), Query Frame = 0


Query: 2   LAFRSSMAMLSLFSFSPFTAFGLHLYCFTAENLP----------------------KQKK 61
           +AFRSS+A  SLFS S   +     + FT    P                      KQKK
Sbjct: 1   MAFRSSIAKFSLFSSSSSQSLHFQHFFFTCTTPPPRIFRFCSISTASGVKNKAKKEKQKK 60

Query: 62  SKNLKANTSVSKSSESSSLSSKLALVKEKR-TRSTKEFDEITVQFGDTAAHIPVTLLEVL 121
           SKNLKA+TSVSKSSES+SLSSKLALVKEKR TRSTKEFDE  +  GDTAAHIPV L EVL
Sbjct: 61  SKNLKASTSVSKSSESASLSSKLALVKEKRRTRSTKEFDENAIPIGDTAAHIPVMLAEVL 120

Query: 122 DVCSASSGRPLCSFVDCTVGADNSSTSRVE------ILLANGSHTIALHKAEDRISAFFS 181
           DV ++SSGRPL SFVDCTVGA   S++ ++        +      IAL KA+DRIS FFS
Sbjct: 121 DVFASSSGRPLRSFVDCTVGAGGHSSAIIQAHPELNFYMGMDVDPIALDKAQDRISDFFS 180

Query: 182 EDSDLKAFVLLKNCKYMKSLLADSDEKPVDPGVDGILMYLGMSSMQVDDPERGISVFGDE 241
           EDSDLKA+++LKN KY+KSLLADSDEKP+DPGVDG++M LGMSSMQVDDPERG  V GD 
Sbjct: 181 EDSDLKAYIVLKNFKYVKSLLADSDEKPLDPGVDGMMMDLGMSSMQVDDPERGFRVLGDG 240

Query: 242 PLDI---------------------------------NWYSLQNKIVKARSQGGGLHSSG 244
           PLD+                                 NWYSLQNKIVKARSQGG LHS+ 
Sbjct: 241 PLDMRMDPQASLKAEDILNNWPETEVGRILRVYGEESNWYSLQNKIVKARSQGG-LHSTT 300

[Close]

BLAST of Cp4.1LG06g04680 vs. ExPASy TrEMBL
Match: A0A5A7T697 (Ribosomal RNA small subunit methyltransferase H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006930 PE=3 SV=1)

HSP 1 Score: 269 bits (687), Expect = 1.61e-84
Identity = 173/305 (56.72%), Postives = 195/305 (63.93%), Query Frame = 0


Query: 2   LAFRSSMAMLSLFSFSPFTAFGLHLYCFTAENLP----------------------KQKK 61
           +AFRSS+A  SLFS S  +    HL+ FT    P                      K KK
Sbjct: 1   MAFRSSIAKFSLFSSSSQSLHFHHLF-FTCTTPPPRIFRFCSISTASGVKNKTKKEKHKK 60

Query: 62  SKNLKANTSVSKSSESSSLSSKLALVKEKR-TRSTKEFDEITVQFGDTAAHIPVTLLEVL 121
           SKNLKA+T VSKSSES+SLSSKLALVKEKR TRSTKEFDE  +  GDTAAHIPV L EVL
Sbjct: 61  SKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDENAIPIGDTAAHIPVMLAEVL 120

Query: 122 DVCSASSGRPLCSFVDCTVGADNSSTSRVE------ILLANGSHTIALHKAEDRISAFFS 181
           DV S+SSGRPL SFVDCTVGA   S++ ++        +      IAL KA+DRIS FFS
Sbjct: 121 DVFSSSSGRPLRSFVDCTVGAGGHSSAIIQAHPELNFYMGMDVDPIALDKAQDRISDFFS 180

Query: 182 EDSDLKAFVLLKNCKYMKSLLADSDEKPVDPGVDGILMYLGMSSMQVDDPERGISVFGDE 241
           EDSDLKA+++LKN KY+KSLLADSDEKP+DPGVDGILM LGMSSMQVDDPERG  V GD 
Sbjct: 181 EDSDLKAYIVLKNFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDG 240

Query: 242 PLDI---------------------------------NWYSLQNKIVKARSQGGGLHSSG 244
           PLD+                                 NWYSLQNKIVKARSQGG LHS+ 
Sbjct: 241 PLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGG-LHSTT 300

[Close]

BLAST of Cp4.1LG06g04680 vs. ExPASy TrEMBL
Match: A0A1S3CR02 (ribosomal RNA small subunit methyltransferase H OS=Cucumis melo OX=3656 GN=LOC103503773 PE=3 SV=1)

HSP 1 Score: 269 bits (687), Expect = 1.61e-84
Identity = 173/305 (56.72%), Postives = 195/305 (63.93%), Query Frame = 0


Query: 2   LAFRSSMAMLSLFSFSPFTAFGLHLYCFTAENLP----------------------KQKK 61
           +AFRSS+A  SLFS S  +    HL+ FT    P                      K KK
Sbjct: 1   MAFRSSIAKFSLFSSSSQSLHFHHLF-FTCTTPPPRIFRFCSISTASGVKNKTKKEKHKK 60

Query: 62  SKNLKANTSVSKSSESSSLSSKLALVKEKR-TRSTKEFDEITVQFGDTAAHIPVTLLEVL 121
           SKNLKA+T VSKSSES+SLSSKLALVKEKR TRSTKEFDE  +  GDTAAHIPV L EVL
Sbjct: 61  SKNLKASTLVSKSSESASLSSKLALVKEKRRTRSTKEFDENAIPIGDTAAHIPVMLAEVL 120

Query: 122 DVCSASSGRPLCSFVDCTVGADNSSTSRVE------ILLANGSHTIALHKAEDRISAFFS 181
           DV S+SSGRPL SFVDCTVGA   S++ ++        +      IAL KA+DRIS FFS
Sbjct: 121 DVFSSSSGRPLRSFVDCTVGAGGHSSAIIQAHPELNFYMGMDVDPIALDKAQDRISDFFS 180

Query: 182 EDSDLKAFVLLKNCKYMKSLLADSDEKPVDPGVDGILMYLGMSSMQVDDPERGISVFGDE 241
           EDSDLKA+++LKN KY+KSLLADSDEKP+DPGVDGILM LGMSSMQVDDPERG  V GD 
Sbjct: 181 EDSDLKAYIVLKNFKYLKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFRVLGDG 240

Query: 242 PLDI---------------------------------NWYSLQNKIVKARSQGGGLHSSG 244
           PLD+                                 NWYSLQNKIVKARSQGG LHS+ 
Sbjct: 241 PLDMRMDPQASLKAEDILNNWPEIEVGRILRDYGEESNWYSLQNKIVKARSQGG-LHSTT 300

[Close]

BLAST of Cp4.1LG06g04680 vs. ExPASy TrEMBL
Match: A0A6J1FNN0 (uncharacterized protein LOC111445901 OS=Cucurbita moschata OX=3662 GN=LOC111445901 PE=3 SV=1)

HSP 1 Score: 266 bits (681), Expect = 1.65e-83
Identity = 173/304 (56.91%), Postives = 194/304 (63.82%), Query Frame = 0


Query: 2   LAFRSSMAMLSLFSFSPFTAFGL-HLYCFTAENLP--------------------KQKKS 61
           +AFRSSM  LSLFS SP  +F L +L    A   P                    KQKK+
Sbjct: 1   MAFRSSMLKLSLFSSSPSQSFRLRYLISTCATPAPSIFRCCSISTATDGNKVKKAKQKKT 60

Query: 62  KNLKANTSVSKSSESSSLSSKLALVKEKR-TRSTKEFDEITVQFGDTAAHIPVTLLEVLD 121
           KN+KA+T+V KSSESSS S KLALVKEKR TRSTKEFDE  VQFGDTAAHIPV L EVLD
Sbjct: 61  KNVKASTAVPKSSESSSSSLKLALVKEKRRTRSTKEFDEKAVQFGDTAAHIPVMLAEVLD 120

Query: 122 VCSASSGRPLCSFVDCTVGADNSSTSRVE------ILLANGSHTIALHKAEDRISAFFSE 181
           V SASSGRPL SFVDCTVGA   S++ ++        +      IAL KA+DRIS  F E
Sbjct: 121 VFSASSGRPLRSFVDCTVGAGGHSSAIIQAHPELKFYMGMDVDPIALDKAQDRISDLFCE 180

Query: 182 DSDLKAFVLLKNCKYMKSLLADSDEKPVDPGVDGILMYLGMSSMQVDDPERGISVFGDEP 241
           DSDLKA+ +LKN KYMKSLLADSDEKP+DPGVDGILM LGMSSMQVDDPERG SV  D P
Sbjct: 181 DSDLKAYTVLKNFKYMKSLLADSDEKPLDPGVDGILMDLGMSSMQVDDPERGFSVLCDGP 240

Query: 242 LDI---------------------------------NWYSLQNKIVKARSQGGGLHSSGQ 244
           LD+                                 NWYSLQNKIVKARSQGG LH++ +
Sbjct: 241 LDMRMDPQASLKAEDILNSWPEIEVGRVLRVYGEESNWYSLQNKIVKARSQGG-LHTTSE 300

[Close]

BLAST of Cp4.1LG06g04680 vs. ExPASy TrEMBL
Match: A0A6J1IWR1 (uncharacterized protein LOC111481293 OS=Cucurbita maxima OX=3661 GN=LOC111481293 PE=3 SV=1)

HSP 1 Score: 263 bits (671), Expect = 1.47e-81
Identity = 171/305 (56.07%), Postives = 192/305 (62.95%), Query Frame = 0


Query: 1   ELAFRSSMAMLSLFSFSPFTAFGL-HLYCFTAENLP--------------------KQKK 60
           E+AFRSSM  LSLFS SP  +F L +L    A   P                    KQKK
Sbjct: 38  EMAFRSSMLKLSLFSSSPSQSFRLRYLISTCATPAPSIFRCCSISTATDGKKVKKAKQKK 97

Query: 61  SKNLKANTSVSKSSESSSLSSKLALVKEKR-TRSTKEFDEITVQFGDTAAHIPVTLLEVL 120
           +KN+KA+T+V KSSESSS S KLALVKEKR TRSTKEFDE  VQFGDTAAHIPV L EVL
Sbjct: 98  TKNVKASTAVPKSSESSSSSLKLALVKEKRRTRSTKEFDEKAVQFGDTAAHIPVMLAEVL 157

Query: 121 DVCSASSGRPLCSFVDCTVGADNSST------SRVEILLANGSHTIALHKAEDRISAFFS 180
           DV SASSGR L SFVDCTVGA   S+      S ++  +      IAL KA+DRIS  F 
Sbjct: 158 DVFSASSGRSLRSFVDCTVGAGGHSSAIIQAHSELKFYMGMDVDPIALDKAQDRISDLFC 217

Query: 181 EDSDLKAFVLLKNCKYMKSLLADSDEKPVDPGVDGILMYLGMSSMQVDDPERGISVFGDE 240
           EDSDLK + +LKN KYMK LLADSDEKP++PGVDGILM LGMSSMQVDDPERG SV  D 
Sbjct: 218 EDSDLKVYTVLKNFKYMKLLLADSDEKPLEPGVDGILMDLGMSSMQVDDPERGFSVLSDG 277

Query: 241 PLDI---------------------------------NWYSLQNKIVKARSQGGGLHSSG 244
           PLD+                                 NWYSLQNKIVKARSQGG LH++ 
Sbjct: 278 PLDMRMDPQASLKAEDILNSWPEMEVGRVLRVYGEESNWYSLQNKIVKARSQGG-LHTTS 337

[Close]

BLAST of Cp4.1LG06g04680 vs. TAIR 10
Match: AT5G10910.1 (mraW methylase family protein )

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-25
Identity = 94/260 (36.15%), Postives = 135/260 (51.92%), Query Frame = 0


Query: 31  AENLPKQKKSKNLKANTSVSKSSESSSLSSKLALVKEK-RTRSTKEFDEITVQFGD--TA 90
           A NL   +  K  K      K  E    +++  + KEK RTRS++ ++   +  GD   +
Sbjct: 37  AGNLNSSETKKKEKEKRKRRKEIEVEKATAEAVVNKEKRRTRSSRGYE---LADGDEVPS 96

Query: 91  AHIPVTLLEVLDVCSASSGRPLCSFVDCTVGADNSSTSRVEILLANGSHT-------IAL 150
           +H+PV L EVLD+ S+     L SFVDCT+GA   S+S ++      SH+       + +
Sbjct: 97  SHVPVMLGEVLDIFSSVR---LRSFVDCTLGAAGHSSSIIQ------SHSELKNFVGMDV 156

Query: 151 HKAEDRISAFFSED---SDLKAFVLLKNCKYMKSLLADSDEKPVDPGVDGILMYLGMSSM 210
                ++  F  +      LKA ++LKN KY+KS++AD+  + +D GVDGILM LGMSSM
Sbjct: 157 DPVARKLGHFHIDSLMHPTLKASIVLKNFKYIKSVIADTQPELLDVGVDGILMDLGMSSM 216

Query: 211 QVDDPERGISVFGDEPLDI---------------------------------NWYSLQNK 245
           QV++PERG SV  + PLD+                                 NWY LQN+
Sbjct: 217 QVNNPERGFSVLQEGPLDMRMDPQATLTAEDIVNSWPESELGRVLRDYGEESNWYLLQNR 276

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g04680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B2IGF2	7.0e-09	30.56	Ribosomal RNA small subunit methyltransferase H OS=Beijerinckia indica subsp. in...	[more]
Q2RK87	7.0e-09	35.94	Ribosomal RNA small subunit methyltransferase H OS=Moorella thermoacetica (strai...	[more]
C6D563	2.6e-08	35.04	Ribosomal RNA small subunit methyltransferase H OS=Paenibacillus sp. (strain JDR...	[more]
B2V4W0	1.3e-07	37.40	Ribosomal RNA small subunit methyltransferase H OS=Clostridium botulinum (strain...	[more]
B2TS30	1.3e-07	37.40	Ribosomal RNA small subunit methyltransferase H OS=Clostridium botulinum (strain...	[more]

BLAST of Cp4.1LG06g04680 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591615.1	3.37e-97	80.30	hypothetical protein SDJN03_13961, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038896155.1	8.12e-88	56.86	ribosomal RNA small subunit methyltransferase H [Benincasa hispida]	[more]
XP_031739414.1	1.35e-84	55.74	uncharacterized protein LOC101221749 [Cucumis sativus] >KGN60150.1 hypothetical ...	[more]
XP_008466336.1	3.32e-84	56.72	PREDICTED: ribosomal RNA small subunit methyltransferase H [Cucumis melo] >KAA00...	[more]
KAG7037555.1	3.41e-83	56.91	rsmH, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG06g04680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDT0	6.55e-85	55.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881630 PE=3 SV=1	[more]
A0A5A7T697	1.61e-84	56.72	Ribosomal RNA small subunit methyltransferase H OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3CR02	1.61e-84	56.72	ribosomal RNA small subunit methyltransferase H OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1FNN0	1.65e-83	56.91	uncharacterized protein LOC111445901 OS=Cucurbita moschata OX=3662 GN=LOC1114459...	[more]
A0A6J1IWR1	1.47e-81	56.07	uncharacterized protein LOC111481293 OS=Cucurbita maxima OX=3661 GN=LOC111481293...	[more]

BLAST of Cp4.1LG06g04680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10910.1	1.4e-25	36.15	mraW methylase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 85..257 e-value: 2.1E-12 score: 49.6
IPR002903	Ribosomal RNA small subunit methyltransferase H	PFAM	PF01795	Methyltransf_5	coord: 88..216 e-value: 2.6E-10 score: 40.3
IPR002903	Ribosomal RNA small subunit methyltransferase H	PANTHER	PTHR11265	S-ADENOSYL-METHYLTRANSFERASE MRAW	coord: 69..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g04680.1	Cp4.1LG06g04680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008168	methyltransferase activity