Cp4.1LG06g04660 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG06g04660
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	replication protein A 32 kDa subunit A-like
Location	Cp4.1LG06: 2178280 .. 2185009 (-)
RNA-Seq Expression	Cp4.1LG06g04660
Synteny	Cp4.1LG06g04660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGGACCGAGAGATTGGGCTCTGTGGGCTTTGCAGCTCATCGACATTGCCGCTCGCAAGATCGGGCGGGAAATCTGAGAATCAGTGGCGGGAAAACGAAAAGCTTCTACTTCATAAGTTCATAATTGCATAGCAATTCTTCACCCGCTTTCCGTTGTTGATTGTTGATCGAGTTGTTAATCACAGGGTTTTAAAGAATGTTCTCTAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTTTTCTCAGACCAATGACTCTTCTTCGGCGAAGGTTAGTCGATGCTATAACTTCTAAATTTCTGTTTGATGAGAGCATGTTTTTGAAATTAAGAGATAGAAATGGTTCTCGAGGTATCAGTACTCCTTAAAGTTGTTGGATAGCTTGGATCCGGCGAGAGCAAAAGTGCAAACCTAAATCGCTTTTTTATCGCCGGAACGATGATCGAAACGGTGTTAAAAGTGTAGAATCAGGATCAAATTCATTTGTTTCATCCTGTTATTTTCGGCTGTAGACAATTTTTTTTTCTTGTCGAATTTATGATACTGGATCAAGCACTAGCGGAAACCGTGAATAAGATGGCAATTGATGACTGTTTGTTACGATTTCTACTATTTTCCATTTTCATACATTTTCATACATTTTGAATTCTTCCATGCAGAATCGAGACACGCCGGGCCTGGTTCCGGCAACTGTAAAACAGATAAGCGAAGCTTCCCATTCTGGCGAAGAGAAGGCCAACTTCGCAATCAACGGCGTTGACATTACAAATGTATACTTCCTCTCTTCTTTCTCACTTTTAAACACTGTTACAGAGTATTTTTTTACAAATAATGACAATAAATTGCAGTACTGAATCAAACGTATGTTAATGTTATCTGTCAATGTAGTAATACTTTCTTGTTCACTAGAGTTATTCACGTTTTCCATTGATTTTGGGCCTCTTTCCATAAAGCTTTCCATAAACTAAATTCTTAGGTTTCTTTTCTGTGGTTCAGTCGCTAGTGGATTCTTCTACCTTTGACCGAAAAGGAGTATAGGCATTATGTTAGCGGAAATCACTGCAATGTGTAAAAAGTGTTCGACCATATATTTTCATATATAGAGTAAATGTTAATGTAAAAGTAACATGTAACTTTTCCCTTCATGAAAGCTATCATTTCTTAAAAGGCCGTGTTGATGAACGTATTCCTGACTGGCTTATCCAGATTTGATCGTTTGTGTATGTGTATTTCTGGTAGTATTCGGAAATGGAGTTACATCTCTTTTCTATTTCCATTCCAGAGTTTTTATGTGTTTCCACGCTCCTTCGAGACTCCGAAAAATGAACAACTTTTCTTCGGAACTGAATCCATTAGTACGGAACATTTCCACTAAAAAAAAAAATAGGGCCCTTTTTCCAAGGATTTCATAATTGGACATTGAACCCATTTCATATGATGGAAGTTGTGGGTGTATTGTAGTTTTTAGGTTTCAACCGATCCTTGTCTTTTCATCTGATTAGCTCTGCACACAGACTATGAATTAGCTCTCTTTGTTGTAAATACTGACATTTTAGTTATTGGAAAAAGGTTACAATCGTTGGGAAGGTCTCTGAGAAAGCTGAAAGGAATACGGACATCACATTTATTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGTATACTGTTGCAGTTGCAATCGTCCTAAACCTTTAAACTCGATCTTTATTCGGGTTGTGTAGCTCATATTACTAAAGAATGCGTGTCAAAAAAATTTCAGGGTAAACGACACTTTCGACACCAAGCAAATGGATGAAATACTGTAAGTTCTTGTTTATTTGATTTTCTTGTGATGACAAATACTATAGTTGTCTTAATGACTCTTCCTTTGATTTTTCTTTTGGCACAGAGATGGAATGTATATACGGGTGAATGGGCATTTGAAAATATTCCAAAGTAACAAGCAAATATTTGCATTCTCTGTAAGGTATGATGTTTATAGTCTCTTCAATCTATTTTCACGCGTTTGGGTACTTCTTTGAAGTTAAATGTTTTACATATTACGCTATCATTTACTTAACTTACAGTCTGTTCTCTTTTCATATTGAAACTTAAGGATTGCGAATTAAACAAGTTGATGTAGGTCAATGCCATATATGTATTACTTCACTGTTATAAAAAATAGCAGCAAATATACCACCTTATGTAGGATCTGTTCAATAGGGTCATTGATTCTTGAGTTCTAAAATAAATAGCAGCATAGAGTCTACTTGATTTGTAGGTAGAATACTGAGGAACTGTTGTACAATGTCCTTGAGTTCTGTTTGACGGTTATGGAGAGAGGAACTTGTTATTGGCATCAAGGAACGAAGAGCCTAAGCAGAAATGGGTAGGATCGGTACCAATAGGCCGGTTTTATTCACATCTTACAAACAAGTGAAGCCGACCATTTTATTCATTATANACACTGTTACAGAGTATTTTTTTACAAATAATGACAATAAATTGCAGTACTGAATCAAACGTATGTTAATGTTATCTGTCAATGTAGTAATACTTTCTTGTTCACTAGAGTTATTCACGTTTTCCATTGATTTTGGGCCTCTTTCCATAAAGCTTTCCATAAACTAAATTCTTAGGTTTCTTTTCTGTGGTTCAGTCGCTAGTGGATTCTTCTACCTTTGACCGAAAAGGAGTATAGGCATTATGTTAGCGGAAATCACTGCAATGTGTAAAAAGTGTTCGACCATATATTTTCATATATAGAGTAAATGTTAATGTAAAAGTAACATGTAACTTTTCCCTTCATGAAAGCTATCATTTCTTAAAAGGCCGTGTTGATGAACGTATTCCTGACTGGCTTATCCAGATTTGATCGTTTGTGTATGTGTATTTCTGGTAGTATTCGGAAATGGAGTTACATCTCTTTTCTATTTCCATTCCAGAGTTTTTATGTGTTTCCACGCTCCTTCGAGACTCCGAAAAATGAACAACTTTTCTTCGGAACTGAATCCATTAGTACGGAACATTTCCACTAAAAAAAAAAATAGGGCCCTTTTTCCAAGGATTTCATAATTGGACATTGAACCCATTTCATATGATGGAAGTTGTGGGTGTATTGTAGTTTTTAGGTTTCAACCGATCCTTGTCTTTTCATCTGATTAGCTCTGCACACAGACTATGAATTAGCTCTCTTTGTTGTAAATACTGACATTTTAGTTATTGGAAAAAGGTTACAATCGTTGGGAAGGTCTCTGAGAAAGCTGAAAGGAATACGGACATCACATTTATTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGTATACTGTTGCAGTTGCAATCGTCCTAAACCTTTAAACTCGATCTTTATTCGGGTTGTGTAGCTCATATTACTAAAGAATGCGTGTCAAAAAAATTTCAGGGTAAACGACACTTTCGACACCAAGCAAATGGATGAAATACTGTAAGTTCTTGTTTATTTGATTTTCTTGTGATGACAAATACTATAGTTGTCTTAATGACTCTTCCTTTGATTTTTCTTTTGGCACAGAGATGGAATGTATATACGGGTGAATGGGCATTTGAAAATATTCCAAAGTAACAAGCAAATATTTGCATTCTCTGTAAGGTATGATGTTTATAGTCTCTTCAATCTATTTTCACGCGTTTGGGTACTTCTTTGAAGTTAAATGTTTTACATATTACGCTATCATTTACTTAACTTACAGTCTGTTCTCTTTTCATATTGAAACTTAAGGATTGCGAATTAAACAAGTTGATGTAGGTCAATGCCATATATGTATTACTTCACTGTTATAAAAAATAGCAGCAAATATACCACCTTATGTAGGATCTGTTCAATAGGGTCATTGATTCTTGAGTTCTAAAATAAATAGCAGCATAGAGTCTACTTGATTTGTAGGTAGAATACTGAGGAACTGTTGTACAATGTCCTTGAGTTCTGTTTGACGGTTATGGAGAGAGGAACTTGTTATTGGCATCAAGGAACGAAGAGCCTAAGCAGAAATGGGTAGGATCGGTACCAATAGGCCGGTTTTATTCACATCTTACAAACAAGTGAAGCCGACCATTTTATTCATTATACTCGTAAGATTGTTGAAGGTCTCGAGGAATGTGTCCTAGCAGAGTAATTGTGAGAGCCCACCTCGGTTTGAGAGGGGAACAAAATATTTCTTATAAGGGCGTGGAAACCTCTTTCTAACATACGCGTTTTAAAAACTTTGAAAACTTGAAAGGCAAAGTCCAAAGAGAACAATATTTGCTAGGGGTGGGCGAAGTTGATATTTGAAATTCTCAAGCTTGTTTTTCAATGGATTTGAGAAATTTTCTGAAATGGCATTAACCGCTCACTTTGCCTTCTTTCATGAAGTAATTATTGGGGTGTTGGAAACCGTCCAATGCACAATTTTCTGTTCCTGTTGTATATTTGACCGATTAAAAAGATGATGAACTTGGTTAGTATATGTTTTGTCAGGCCTATTACAAATTTTGATGAAATTACCTTCCACTTTATCGAATGCATACATGAGCACTTGCGGAATTCCAAGTTACAGGTACTGGTTGCTGGAGCTGACTTGATAGCTGCGCTTCTAACTGTAATATTTTTTATGATTGAAATAGTTATTAATGAATACCAGAATTCTCAATTCATTTGTGTTTAAACTGCTAGAATCTCAATGGAGTTGGATCGACACAGTTCCTATCCTCGGATTCAATTGTGAAGACTCCAATGCAGAATGGCTCGAGTGGATATCCGACAGCATCTTCAGTACTAGTAAGAGGCTAACCACGATTATTAATGGTCATGTGAAATTTTGCACGAAATTATGTGTCGTGGTTTATGCGCGAAGTGAACAATATCATATCATTTTCGAGGGTTCTTACGTTGAAAAATTACCACAGTACTTAATTATTCAACTGGGATTCAAATCTAATTTGTTTTTGCAGCCATCTGAGCAGCACACTGTTGATGTTAAGAAGAATTGTGATGACTTGATCCTCGACTATCTTCAGCTGCCCTCCAGCGTGTAAGTTGTCCCAAACCAAAATTTCCTTTTCCTTTCTGGATTATTTTATTTGCTGGCTGGTTACTCTGCATTATCCTATATGAGATTGACTTGAGCTTGACTTCTGTCCGGAAACAAGGTGGTTTTTACATTTAAAGAATTGAATTCCATCCATCAGATGTGACTATGAGTCATACATAGTACTTGTTAACCCTCTGTGAATAGCAAACAAGACGTTAGGTCGGTGGTTGACTTTTAGTCACAGGTCACTTCTGATTATTGGTTACATAGACACCCACACCCAGTTGCCCCTTGGCCCAATAATAAGGGGACAAGGTATGACCTTAGGATTGTACGGTTCAAAAATAGTGTCCTTGAGAGATTTATTGGTTCCTAAATACGGACGGTATTGTTGAGGATTATTGAGAGAGTAGTCCCACGTCTGCTAATAAGAAATTGTTTATGGGTTTATAAGGAACAAATGCATCTTCATTGATACGAGGCCTTTTGGGTAAACTAAAAGTAAAGTTACGAGAGCTTATGCTCAAAGTAGACAATATGTACCACGGTGAAGTTACGTGGAAATATAAATTTGGTTTTATATTTTAATTCGTCTATCGTTGATTATTTAAATTTAGTAATTATAGTTCGAATATATTCCAAAATTCGCCATTTGCAGTGCCAAAGAAAGAGGGATACACAGAGATGAACTTTCCCAACAACTGAAGATTCCAATGGAGAAAATACTGTATGCCTTCTCCTTCCTCCACCTCCCTTCCTATAATGGTTGCAATTAACTCTTTAATTATTTTGTTTTTTGTTTTCAGTAACTCCATAAGGTCTCTTGAAGATGAAGGTTTGATATATTCCACCATAGATGAGTTTCATTTCAAGTCTGCTGCATAGGATTTTGGAACGGGTAAAGTGCAAACCTATGTTAGTACTGACATGACTATAGGTACTTGAAGCATTATGGGTAAAGTTCAAACTTTTATCCTTTTTTTTATTTTTTTATTTTTTTTTTTTTTTTTACTGCCCCTTTCAAAACCTCTAGAATTCAAAGTATATGGTGTTTTGAAGCTTTATTTGTCTAAATACATAACATTAGGAGGAAAAGTATATGGTCTATCAATTAGTCGATTAATTTTATATCATTGATCAATTAGTTGATTGTTGATCGATAAGTCTCTTGATTCATCAGAAGTTAAACTGTTAGACGAATACGACTTTCCACAATGGTATGATATTGTTCACTTTGAGCATGAGTCCTCATGGTTTTGATTTGGGTTTCCCCGAAAGGCTTCGTATTAGTGGAGAGAGTATTTTTTGTTTATAAACTCATGATCATTCGATTGGACTTTCATCATCCAACATAAATAAATCCATTAGTAAATATTCATTATCACGAACATAAGGATATAACTTTATTTTACCTTAAGTTATCGAAATGAAAAAATTTTAAAACCCGTGAACCATCAGTAAATATTTACCTGGGGTAGGTTTTTTGGGGTCAAATTTTGAAATTTGAGTGAAGTTTTTTATGTATATATGTAATTTTGTACTGTTTTTGGAAAAGGACCCTTCCTTTTTACTTCCAGTTGTTATTTTCTTTCTTTTGGAATTAAAAAATAATAATAATAATGGATGGGATTGACATCCCTTCACATTCTCCCCTGGCTTCACTGCCTTTGAAAGGCTATCAAA

mRNA sequence

GATGGACCGAGAGATTGGGCTCTGTGGGCTTTGCAGCTCATCGACATTGCCGCTCGCAAGATCGGGCGGGAAATCTGAGAATCAGTGGCGGGAAAACGAAAAGCTTCTACTTCATAAGTTCATAATTGCATAGCAATTCTTCACCCGCTTTCCGTTGTTGATTGTTGATCGAGTTGTTAATCACAGGGTTTTAAAGAATGTTCTCTAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTTTTCTCAGACCAATGACTCTTCTTCGGCGAAGAATCGAGACACGCCGGGCCTGGTTCCGGCAACTGTAAAACAGATAAGCGAAGCTTCCCATTCTGGCGAAGAGAAGGCCAACTTCGCAATCAACGGCGTTGACATTACAAATGTTACAATCGTTGGGAAGGTCTCTGAGAAAGCTGAAAGGAATACGGACATCACATTTATTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGGTAAACGACACTTTCGACACCAAGCAAATGGATGAAATACTAGATGGAATGTATATACGGGTGAATGGGCATTTGAAAATATTCCAAAGTAACAAGCAAATATTTGCATTCTCTGTAAGTTATTGGAAAAAGGTTACAATCGTTGGGAAGGTCTCTGAGAAAGCTGAAAGGAATACGGACATCACATTTATTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGGTAAACGACACTTTCGACACCAAGCAAATGGATGAAATACTAGATGGAATGTATATACGGGTGAATGGGCATTTGAAAATATTCCAAAGTAACAAGCAAATATTTGCATTCTCTGTAAGGCCTATTACAAATTTTGATGAAATTACCTTCCACTTTATCGAATGCATACATGAGCACTTGCGGAATTCCAAGTTACAGGTACTGGTTGCTGGAGCTGACTTGATAGCTGCGCTTCTAACTAATCTCAATGGAGTTGGATCGACACAGTTCCTATCCTCGGATTCAATTGTGAAGACTCCAATGCAGAATGGCTCGAGTGGATATCCGACAGCATCTTCAGTACTACCATCTGAGCAGCACACTGTTGATGTTAAGAAGAATTGTGATGACTTGATCCTCGACTATCTTCAGCTGCCCTCCAGCGTTGCCAAAGAAAGAGGGATACACAGAGATGAACTTTCCCAACAACTGAAGATTCCAATGGAGAAAATACTTAACTCCATAAGGTCTCTTGAAGATGAAGGTTTGATATATTCCACCATAGATGAGTTTCATTTCAAGTCTGCTGCATAGGATTTTGGAACGGGTAAAGTGCAAACCTATGTTAGTACTGACATGACTATAGGTACTTGAAGCATTATGGGTAAAGTTCAAACTTTTATCCTTTTTTTTATTTTTTTATTTTTTTTTTTTTTTTTACTGCCCCTTTCAAAACCTCTAGAATTCAAAGTATATGGTGTTTTGAAGCTTTATTTGTCTAAATACATAACATTAGGAGGAAAAGTATATGGTCTATCAATTAGTCGATTAATTTTATATCATTGATCAATTAGTTGATTGTTGATCGATAAGTCTCTTGATTCATCAGAAGTTAAACTGTTAGACGAATACGACTTTCCACAATGGTATGATATTGTTCACTTTGAGCATGAGTCCTCATGGTTTTGATTTGGGTTTCCCCGAAAGGCTTCGTATTAGTGGAGAGAGTATTTTTTGTTTATAAACTCATGATCATTCGATTGGACTTTCATCATCCAACATAAATAAATCCATTAGTAAATATTCATTATCACGAACATAAGGATATAACTTTATTTTACCTTAAGTTATCGAAATGAAAAAATTTTAAAACCCGTGAACCATCAGTAAATATTTACCTGGGGTAGGTTTTTTGGGGTCAAATTTTGAAATTTGAGTGAAGTTTTTTATGTATATATGTAATTTTGTACTGTTTTTGGAAAAGGACCCTTCCTTTTTACTTCCAGTTGTTATTTTCTTTCTTTTGGAATTAAAAAATAATAATAATAATGGATGGGATTGACATCCCTTCACATTCTCCCCTGGCTTCACTGCCTTTGAAAGGCTATCAAA

Coding sequence (CDS)

ATGTTCTCTAGCAGCCAGTTTGATTCCGGCAGTGGATTTACGTTTTCTCAGACCAATGACTCTTCTTCGGCGAAGAATCGAGACACGCCGGGCCTGGTTCCGGCAACTGTAAAACAGATAAGCGAAGCTTCCCATTCTGGCGAAGAGAAGGCCAACTTCGCAATCAACGGCGTTGACATTACAAATGTTACAATCGTTGGGAAGGTCTCTGAGAAAGCTGAAAGGAATACGGACATCACATTTATTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGGTAAACGACACTTTCGACACCAAGCAAATGGATGAAATACTAGATGGAATGTATATACGGGTGAATGGGCATTTGAAAATATTCCAAAGTAACAAGCAAATATTTGCATTCTCTGTAAGTTATTGGAAAAAGGTTACAATCGTTGGGAAGGTCTCTGAGAAAGCTGAAAGGAATACGGACATCACATTTATTGTAGATGATGGAACAGGAAGAATTGGCTGCAAAAGATGGGTAAACGACACTTTCGACACCAAGCAAATGGATGAAATACTAGATGGAATGTATATACGGGTGAATGGGCATTTGAAAATATTCCAAAGTAACAAGCAAATATTTGCATTCTCTGTAAGGCCTATTACAAATTTTGATGAAATTACCTTCCACTTTATCGAATGCATACATGAGCACTTGCGGAATTCCAAGTTACAGGTACTGGTTGCTGGAGCTGACTTGATAGCTGCGCTTCTAACTAATCTCAATGGAGTTGGATCGACACAGTTCCTATCCTCGGATTCAATTGTGAAGACTCCAATGCAGAATGGCTCGAGTGGATATCCGACAGCATCTTCAGTACTACCATCTGAGCAGCACACTGTTGATGTTAAGAAGAATTGTGATGACTTGATCCTCGACTATCTTCAGCTGCCCTCCAGCGTTGCCAAAGAAAGAGGGATACACAGAGATGAACTTTCCCAACAACTGAAGATTCCAATGGAGAAAATACTTAACTCCATAAGGTCTCTTGAAGATGAAGGTTTGATATATTCCACCATAGATGAGTTTCATTTCAAGTCTGCTGCATAG

Protein sequence

MFSSSQFDSGSGFTFSQTNDSSSAKNRDTPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVNGHLKIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQVLVAGADLIAALLTNLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA

Homology

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BLAST of Cp4.1LG06g04660 vs. ExPASy Swiss-Prot
Match: Q9ZQ19 (Replication protein A 32 kDa subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA2A PE=1 SV=2)

HSP 1 Score: 222.2 bits (565), Expect = 9.2e-57
Identity = 138/369 (37.40%), Postives = 191/369 (51.76%), Query Frame = 0


Query: 1   MFSSSQFD-----SGSGFTFSQ-----TNDSSSAKNRDTPGLVPATVKQISEASHSGEEK 60
           MFSSSQF+     SG GF  SQ      + SS+AKNRD  GLVP TVKQI+E   S  EK
Sbjct: 1   MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60

Query: 61  ANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILD 120
           +   ING+ +TNV++VG V +K E                                    
Sbjct: 61  SGLVINGISLTNVSLVGLVCDKDE------------------------------------ 120

Query: 121 GMYIRVNGHLKIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCK 180
                                                    + T++ F +DDGTGRI CK
Sbjct: 121 ----------------------------------------SKVTEVRFTLDDGTGRIDCK 180

Query: 181 RWVNDTFDTKQMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHE 240
           RWV++TFD ++M+ + DG Y+R++GHLK FQ   Q+  FSVRPI +F+E+TFH+IECIH 
Sbjct: 181 RWVSETFDAREMESVRDGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHF 240

Query: 241 HLRNSKLQVLVAGADLIAALLTNLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSVLPSE 300
           + +NS+ Q    G D+  ++ T   G  +T   +  + V +   N  +G           
Sbjct: 241 YSQNSESQRQQVG-DVTQSVNTTFQGGSNTNQATLLNPVVSSQNNDGNG----------- 275

Query: 301 QHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIY 360
                 +KN DD+ILDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIY
Sbjct: 301 ------RKNLDDMILDYLKQPACTARQQGIHIDEIAQQLKIPKNKLEGVVQSLEGDGLIY 275

[Close]

BLAST of Cp4.1LG06g04660 vs. ExPASy Swiss-Prot
Match: Q8LFJ8 (Replication protein A 32 kDa subunit B OS=Arabidopsis thaliana OX=3702 GN=RPA2B PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.9e-36
Identity = 111/366 (30.33%), Postives = 169/366 (46.17%), Query Frame = 0


Query: 2   FSSSQFDSGSGFTFSQT-----NDSSSAKNRDTPGLVPATVKQISEASHSGEEKANFAIN 61
           F  +   +G GF  SQ        SSS KNRD   L+P T+KQ+S AS +GE  +NF+I+
Sbjct: 6   FDGNAAFAGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSASTTGE--SNFSID 65

Query: 62  GVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRV 121
           GVDI  V IVG++S    R T + F+VDDGTG      WV+                   
Sbjct: 66  GVDIKTVVIVGRISRMENRITQVDFVVDDGTG------WVD------------------- 125

Query: 122 NGHLKIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDT 181
                                                               C RW +  
Sbjct: 126 ----------------------------------------------------CVRWCHAR 185

Query: 182 FDTKQMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSK 241
            +T++M+ +  GMY+R++GHLKIFQ  + +  FSVRP+T+F+EI  HF EC++ H+ N+K
Sbjct: 186 QETEEMEAVKLGMYVRLHGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTK 245

Query: 242 LQVLVAGADLIAALLTNLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSVLPSEQHTVDV 301
           L+            +T        Q     S + TP +   +G    S+  P++ +  D 
Sbjct: 246 LR---------GGSITQDTATPRPQM--PYSTMPTPAKPYQTG---PSNQFPNQFN--DS 276

Query: 302 KKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEF 361
                  +L+YL  P  +  E G+H D ++++L+IP+ ++  ++  L ++G IYST+DE 
Sbjct: 306 MHGVKQTVLNYLNQPMHIVSEAGVHCDIIARELRIPLLQVKEALEQLSNDGCIYSTLDET 276

Query: 362 HFKSAA 363
            FKS A
Sbjct: 366 CFKSTA 276

[Close]

BLAST of Cp4.1LG06g04660 vs. ExPASy Swiss-Prot
Match: Q6K9U2 (Replication protein A 32 kDa subunit A OS=Oryza sativa subsp. japonica OX=39947 GN=RPA2A PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.5e-35
Identity = 115/367 (31.34%), Postives = 164/367 (44.69%), Query Frame = 0


Query: 2   FSSSQFDSGSGFTFSQTNDSSSAKNRDTPGLVPATVKQISEASHS---GEEKANFAINGV 61
           FS SQF S        T  S   K+R     +P TVKQISEA  S   GE+ A F ++GV
Sbjct: 10  FSPSQFTSSQNAAADSTTPS---KSRGASSTMPLTVKQISEAQQSGITGEKGAPFVVDGV 69

Query: 62  DITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVNG 121
           +  NV +VG VS K ERNTD++F +DDGTGR                             
Sbjct: 70  ETANVRLVGLVSGKTERNTDVSFTIDDGTGR----------------------------- 129

Query: 122 HLKIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFD 181
                                                + FI           RWVND  D
Sbjct: 130 -------------------------------------LDFI-----------RWVNDGAD 189

Query: 182 TKQMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQ 241
           + +   + +GMY+ V G LK  Q  K+  AF++RP+T+++E+T HFI+C+  HL N+K Q
Sbjct: 190 SAETAAVQNGMYVSVIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQ 249

Query: 242 VLVAGADLIAALLTNLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSVLPSEQHTVDV-- 301
                   I +     + +GS+              NG S   T +SV  +    + V  
Sbjct: 250 --------IGSPAKTYSAMGSSS------------SNGFSEMTTPTSVKSNPAPVLSVTN 276

Query: 302 --KKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTID 361
             K + +  +L+  + P++V  E G+H DE+ ++ ++P  KI  +I  L D G IYSTID
Sbjct: 310 GSKTDLNTEVLNVFREPANVESEHGVHIDEIVKRFRLPEAKIKVAIDYLADIGHIYSTID 276

[Close]

BLAST of Cp4.1LG06g04660 vs. ExPASy Swiss-Prot
Match: Q6H7J5 (Replication protein A 32 kDa subunit B OS=Oryza sativa subsp. japonica OX=39947 GN=RPA2B PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.5e-32
Identity = 103/371 (27.76%), Postives = 167/371 (45.01%), Query Frame = 0


Query: 3   SSSQFDSGSGFTFSQTNDSSSA---------KNRDTPGLVPATVKQISEASHSGEEKANF 62
           ++S    G GF  SQ  +++           K+R+   L+P TVKQI +AS + ++K+NF
Sbjct: 20  NASSLFGGGGFMPSQATNAAEGTSGGGGGFPKSRNAQALLPLTVKQIMDASQTNDDKSNF 79

Query: 63  AINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMY 122
           A+NG++++                                                    
Sbjct: 80  AVNGMEVST--------------------------------------------------- 139

Query: 123 IRVNGHLKIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWV 182
                                     V +VG++  K +R TD++F +DDGTGR+   RW 
Sbjct: 140 --------------------------VRLVGRMLNKLDRVTDVSFTLDDGTGRVPVNRWE 199

Query: 183 NDTFDTKQMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLR 242
           ND+ DTK+M +I +G Y+ VNG LK FQ  +Q+ A+SVR ITNF+++T HF+ C+H HL 
Sbjct: 200 NDSTDTKEMADIQNGDYVIVNGGLKGFQGKRQVVAYSVRRITNFNDVTHHFLHCVHVHLE 259

Query: 243 NSKLQVLVAGADLIAALLTNLNGVGST--QFLSSDSIV--KTPMQNGSSGYPTASSVLPS 302
            ++ +  V           N N    T  Q +  DS+   ++P+ N +S +        S
Sbjct: 260 LTRPKSQV-----------NANTATGTPNQTMPRDSMAYNQSPLTNQASTF--------S 294

Query: 303 EQHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLI 361
                    N  DL+L+    P+ +  + G+  D +S++L +P E +   I    D G +
Sbjct: 320 APQNTGTGTNMIDLVLNVFHDPAVMNDDHGVGVDYVSRRLNLPEETVGKIIIDQVDLGHL 294

[Close]

BLAST of Cp4.1LG06g04660 vs. ExPASy Swiss-Prot
Match: Q5Z8L1 (Replication protein A 32 kDa subunit C OS=Oryza sativa subsp. japonica OX=39947 GN=RPA2C PE=1 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 2.0e-19
Identity = 45/101 (44.55%), Postives = 66/101 (65.35%), Query Frame = 0


Query: 140 VTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVNGHLKI 199
           V ++G+V     R+TD+ F +DD TG+I   RW+ D  DT+    I +G+Y++V  +L  
Sbjct: 86  VRVLGRVVSVVSRDTDVCFTLDDSTGKIPLVRWITDQSDTRDTSYIQEGVYVKVQVNLMG 145

Query: 200 FQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRN--SKLQ 239
           FQ+ KQ  A S+RPI NF+E+  HFIEC+H HL +  SK+Q
Sbjct: 146 FQAKKQGLARSIRPINNFNEVVLHFIECMHVHLESVQSKMQ 186

HSP 2 Score: 46.2 bits (108), Expect = 9.1e-04
Identity = 22/58 (37.93%), Postives = 34/58 (58.62%), Query Frame = 0


Query: 303 LILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS 361
           ++L+ LQ P  +A E G H DEL ++  +P   I+  ++ L   G +Y TID+ H KS
Sbjct: 369 MVLEALQQPDILALEHGAHVDELVRRTGMPKANIMGVVKHLAAAGFVYWTIDDNHVKS 426

[Close]

BLAST of Cp4.1LG06g04660 vs. NCBI nr
Match: XP_023535200.1 (replication protein A 32 kDa subunit A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 491 bits (1263), Expect = 1.61e-172
Identity = 271/362 (74.86%), Postives = 271/362 (74.86%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTFSQTNDSSSAKNRDTPGLVPATVKQISEASHSGEEKANFAINGVDI 60
           MFSSSQFDSGSGFTFSQTNDSSSAKNRDTPGLVPATVKQISEASHSGEEKANFAINGVDI
Sbjct: 1   MFSSSQFDSGSGFTFSQTNDSSSAKNRDTPGLVPATVKQISEASHSGEEKANFAINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVNGHL 120
           TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVN   
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVN--- 120

Query: 121 KIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTK 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 QMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQVL 240
                         GHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQ  
Sbjct: 181 --------------GHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQ-- 240

Query: 241 VAGADLIAALLTNLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSVLPSEQHTVDVKKNC 300
                       NLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSVLPSEQHTVDVKKNC
Sbjct: 241 ------------NLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSVLPSEQHTVDVKKNC 271

Query: 301 DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS 360
           DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS
Sbjct: 301 DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS 271

Query: 361 AA 362
           AA
Sbjct: 361 AA 271

[Close]

BLAST of Cp4.1LG06g04660 vs. NCBI nr
Match: XP_022936562.1 (replication protein A 32 kDa subunit A-like [Cucurbita moschata])

HSP 1 Score: 477 bits (1227), Expect = 4.87e-167
Identity = 265/362 (73.20%), Postives = 266/362 (73.48%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTFSQTNDSSSAKNRDTPGLVPATVKQISEASHSGEEKANFAINGVDI 60
           MFSSSQFDSGSGFT SQTNDSSSAKNR+TPGLVPATVKQISEASHSGEEKANF INGVDI
Sbjct: 1   MFSSSQFDSGSGFTSSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFVINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVNGHL 120
           TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEI DGMYIRVN   
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVN--- 120

Query: 121 KIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTK 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 QMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQVL 240
                         GHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQ  
Sbjct: 181 --------------GHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQ-- 240

Query: 241 VAGADLIAALLTNLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSVLPSEQHTVDVKKNC 300
                       NLNGVGSTQF SSDSIVKTPMQNGSSGY TASSVLPSEQHTVDVKKNC
Sbjct: 241 ------------NLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVLPSEQHTVDVKKNC 271

Query: 301 DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS 360
           DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS
Sbjct: 301 DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS 271

Query: 361 AA 362
           AA
Sbjct: 361 AA 271

[Close]

BLAST of Cp4.1LG06g04660 vs. NCBI nr
Match: XP_022976184.1 (replication protein A 32 kDa subunit A-like [Cucurbita maxima])

HSP 1 Score: 476 bits (1226), Expect = 7.44e-167
Identity = 267/364 (73.35%), Postives = 268/364 (73.63%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTFSQTNDSSSAKNRDTPGLVPATVKQISEASHSGEEKANFAINGVDI 60
           MFSSSQFDSGSGFTFSQTNDSSSAKNR+TPGLVPATVKQISEASHSGEEKANFAINGVDI
Sbjct: 1   MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVNGHL 120
           TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEI DGMYIRVN   
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVN--- 120

Query: 121 KIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTK 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 QMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQVL 240
                         GHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQ  
Sbjct: 181 --------------GHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQ-- 240

Query: 241 VAGADLIAALLTNLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSV--LPSEQHTVDVKK 300
                       NLNGVGSTQF SSDSIVKTPMQNGSSGY TASSV  LPSEQHTVDVKK
Sbjct: 241 ------------NLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPSEQHTVDVKK 273

Query: 301 NCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHF 360
           NCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHF
Sbjct: 301 NCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHF 273

Query: 361 KSAA 362
           KSAA
Sbjct: 361 KSAA 273

[Close]

BLAST of Cp4.1LG06g04660 vs. NCBI nr
Match: KAG7024504.1 (Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 475 bits (1223), Expect = 1.98e-166
Identity = 265/362 (73.20%), Postives = 266/362 (73.48%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTFSQTNDSSSAKNRDTPGLVPATVKQISEASHSGEEKANFAINGVDI 60
           MFSSSQFDSGSGFT SQT DSSSAKNR+TPGLVPATVKQISEASHSGEEKANFAINGVDI
Sbjct: 1   MFSSSQFDSGSGFTSSQTYDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVNGHL 120
           TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEI DGMYIRVN   
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVN--- 120

Query: 121 KIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTK 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 QMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQVL 240
                         GHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQ  
Sbjct: 181 --------------GHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQ-- 240

Query: 241 VAGADLIAALLTNLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSVLPSEQHTVDVKKNC 300
                       NLNGVGSTQF SSDSIVKTPMQNGSSGY TASSVLPSEQHTVDVKKNC
Sbjct: 241 ------------NLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVLPSEQHTVDVKKNC 271

Query: 301 DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS 360
           DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS
Sbjct: 301 DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS 271

Query: 361 AA 362
           AA
Sbjct: 361 AA 271

[Close]

BLAST of Cp4.1LG06g04660 vs. NCBI nr
Match: KAG6591621.1 (Replication protein A 32 kDa subunit A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 475 bits (1222), Expect = 2.81e-166
Identity = 264/362 (72.93%), Postives = 266/362 (73.48%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTFSQTNDSSSAKNRDTPGLVPATVKQISEASHSGEEKANFAINGVDI 60
           MFSSSQFDSGSGFT SQT DSSSAKNR+TPGLVPATVKQISEASHSGEEKANFAINGVDI
Sbjct: 1   MFSSSQFDSGSGFTSSQTYDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVNGHL 120
           TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEI DGMYIRVN   
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVN--- 120

Query: 121 KIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTK 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 QMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQVL 240
                         GHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQ  
Sbjct: 181 --------------GHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQ-- 240

Query: 241 VAGADLIAALLTNLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSVLPSEQHTVDVKKNC 300
                       NLNGVGSTQF SSDSIVKTPMQNGSSGY TASSVLPSEQHTVDVKKNC
Sbjct: 241 ------------NLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVLPSEQHTVDVKKNC 271

Query: 301 DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS 360
           DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYST+DEFHFKS
Sbjct: 301 DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTVDEFHFKS 271

Query: 361 AA 362
           AA
Sbjct: 361 AA 271

[Close]

BLAST of Cp4.1LG06g04660 vs. ExPASy TrEMBL
Match: A0A6J1F8S8 (replication protein A 32 kDa subunit A-like OS=Cucurbita moschata OX=3662 GN=LOC111443128 PE=3 SV=1)

HSP 1 Score: 477 bits (1227), Expect = 2.36e-167
Identity = 265/362 (73.20%), Postives = 266/362 (73.48%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTFSQTNDSSSAKNRDTPGLVPATVKQISEASHSGEEKANFAINGVDI 60
           MFSSSQFDSGSGFT SQTNDSSSAKNR+TPGLVPATVKQISEASHSGEEKANF INGVDI
Sbjct: 1   MFSSSQFDSGSGFTSSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFVINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVNGHL 120
           TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEI DGMYIRVN   
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVN--- 120

Query: 121 KIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTK 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 QMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQVL 240
                         GHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQ  
Sbjct: 181 --------------GHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQ-- 240

Query: 241 VAGADLIAALLTNLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSVLPSEQHTVDVKKNC 300
                       NLNGVGSTQF SSDSIVKTPMQNGSSGY TASSVLPSEQHTVDVKKNC
Sbjct: 241 ------------NLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVLPSEQHTVDVKKNC 271

Query: 301 DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS 360
           DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS
Sbjct: 301 DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS 271

Query: 361 AA 362
           AA
Sbjct: 361 AA 271

[Close]

BLAST of Cp4.1LG06g04660 vs. ExPASy TrEMBL
Match: A0A6J1IMU1 (replication protein A 32 kDa subunit A-like OS=Cucurbita maxima OX=3661 GN=LOC111476648 PE=3 SV=1)

HSP 1 Score: 476 bits (1226), Expect = 3.60e-167
Identity = 267/364 (73.35%), Postives = 268/364 (73.63%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTFSQTNDSSSAKNRDTPGLVPATVKQISEASHSGEEKANFAINGVDI 60
           MFSSSQFDSGSGFTFSQTNDSSSAKNR+TPGLVPATVKQISEASHSGEEKANFAINGVDI
Sbjct: 1   MFSSSQFDSGSGFTFSQTNDSSSAKNRETPGLVPATVKQISEASHSGEEKANFAINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVNGHL 120
           TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEI DGMYIRVN   
Sbjct: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEIQDGMYIRVN--- 120

Query: 121 KIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTK 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 QMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQVL 240
                         GHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQ  
Sbjct: 181 --------------GHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQ-- 240

Query: 241 VAGADLIAALLTNLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSV--LPSEQHTVDVKK 300
                       NLNGVGSTQF SSDSIVKTPMQNGSSGY TASSV  LPSEQHTVDVKK
Sbjct: 241 ------------NLNGVGSTQFQSSDSIVKTPMQNGSSGYQTASSVSVLPSEQHTVDVKK 273

Query: 301 NCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHF 360
           NCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHF
Sbjct: 301 NCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHF 273

Query: 361 KSAA 362
           KSAA
Sbjct: 361 KSAA 273

[Close]

BLAST of Cp4.1LG06g04660 vs. ExPASy TrEMBL
Match: A0A1S3CR64 (replication protein A 32 kDa subunit A-like OS=Cucumis melo OX=3656 GN=LOC103503766 PE=3 SV=1)

HSP 1 Score: 438 bits (1127), Expect = 3.87e-152
Identity = 240/362 (66.30%), Postives = 257/362 (70.99%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTFSQTNDSSSAKNRDTPGLVPATVKQISEASHSGEEKANFAINGVDI 60
           MFSS+QFDSGSGFT SQTNDSSSAK+R++PGLVP TVKQISEASHSGEEKANF IN VDI
Sbjct: 1   MFSSTQFDSGSGFTSSQTNDSSSAKSRESPGLVPVTVKQISEASHSGEEKANFVINDVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVNGHL 120
           TNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTFDTKQM+EI DGMY+RVN   
Sbjct: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVN--- 120

Query: 121 KIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTK 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 QMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQVL 240
                         GHLK+FQSNKQIFAFSVRP+TNFDEITFHF+ECIH+HLRNSKLQ  
Sbjct: 181 --------------GHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQ-- 240

Query: 241 VAGADLIAALLTNLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSVLPSEQHTVDVKKNC 300
                       NL G GSTQ  +SDSIVKTP+QNGSSGY T SS +PSEQHTVDVKK+C
Sbjct: 241 ------------NLKGDGSTQLQTSDSIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSC 271

Query: 301 DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS 360
           D+L+LDYLQLPSSVAKERGIHRDELSQQLKIPMEKIL+SIRSLEDEGLIYSTIDEFHFKS
Sbjct: 301 DELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKS 271

Query: 361 AA 362
           AA
Sbjct: 361 AA 271

[Close]

BLAST of Cp4.1LG06g04660 vs. ExPASy TrEMBL
Match: A0A0A0LEG7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881710 PE=3 SV=1)

HSP 1 Score: 434 bits (1116), Expect = 1.82e-150
Identity = 236/362 (65.19%), Postives = 256/362 (70.72%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTFSQTNDSSSAKNRDTPGLVPATVKQISEASHSGEEKANFAINGVDI 60
           MFSS+QFDS SGFT SQTNDSSSAK+R++PGL+P TVKQISEASHSGEEKANF INGVDI
Sbjct: 1   MFSSTQFDSASGFTSSQTNDSSSAKSRESPGLIPVTVKQISEASHSGEEKANFVINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVNGHL 120
           TNVTIVGKVSEKAERNTDITF VDDGTG IGCKRWVNDTFDT QM+EI DGMY+RVN   
Sbjct: 61  TNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTNQMEEIQDGMYVRVN--- 120

Query: 121 KIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTK 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 QMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQVL 240
                         GHLK+FQSNKQIFAFSVRP+TNFDEITFHFIECIH+HLRNSKLQ  
Sbjct: 181 --------------GHLKMFQSNKQIFAFSVRPVTNFDEITFHFIECIHDHLRNSKLQ-- 240

Query: 241 VAGADLIAALLTNLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSVLPSEQHTVDVKKNC 300
                       NL G GSTQ  +SDSIVKTP+QNGS+GY T SS +PSEQHTVDVKK+C
Sbjct: 241 ------------NLKGNGSTQLQTSDSIVKTPVQNGSNGYHTTSSAIPSEQHTVDVKKSC 271

Query: 301 DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS 360
           D+L+LDYLQLPSSVAKERGIH+DELSQQLK+PMEKIL+SIRSLEDEGLIYSTIDEFHFKS
Sbjct: 301 DELVLDYLQLPSSVAKERGIHKDELSQQLKLPMEKILDSIRSLEDEGLIYSTIDEFHFKS 271

Query: 361 AA 362
           AA
Sbjct: 361 AA 271

[Close]

BLAST of Cp4.1LG06g04660 vs. ExPASy TrEMBL
Match: A0A6J1CUB8 (replication protein A 32 kDa subunit A OS=Momordica charantia OX=3673 GN=LOC111014622 PE=3 SV=1)

HSP 1 Score: 412 bits (1060), Expect = 5.76e-142
Identity = 233/362 (64.36%), Postives = 248/362 (68.51%), Query Frame = 0


Query: 1   MFSSSQFDSGSGFTFSQTNDSSSAKNRDTPGLVPATVKQISEASHSGEEKANFAINGVDI 60
           MFSSSQFDSGSGFT SQ  DS+SAK+R++PGLVP TVKQISEA HSGEEKANF INGVDI
Sbjct: 1   MFSSSQFDSGSGFTSSQVPDSTSAKSRESPGLVPVTVKQISEAFHSGEEKANFVINGVDI 60

Query: 61  TNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVNGHL 120
           TNVTIVGKVSEKAERNTDITF+VDDGTGRIGCKRWVNDTFDTKQMD+I DGMYIRVN   
Sbjct: 61  TNVTIVGKVSEKAERNTDITFVVDDGTGRIGCKRWVNDTFDTKQMDDIQDGMYIRVN--- 120

Query: 121 KIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTK 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 QMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQVL 240
                         GHLKIFQ N QIFAFSVRP+TN DEITFHFIECIH++LRNSKLQ  
Sbjct: 181 --------------GHLKIFQGNMQIFAFSVRPVTNCDEITFHFIECIHDYLRNSKLQ-- 240

Query: 241 VAGADLIAALLTNLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSVLPSEQHTVDVKKNC 300
                        LNGV STQ  SSDS V   +Q+GSSGY TASS L S QHTVDVKKN 
Sbjct: 241 -------------LNGVASTQSQSSDSTVNALVQSGSSGYQTASSELSSGQHTVDVKKNP 270

Query: 301 DDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKS 360
           DDL+LDYLQLPSSVAKE+GIHRDELSQQLKIP+EKIL+SIRSLEDEGLIYSTIDEFHFKS
Sbjct: 301 DDLVLDYLQLPSSVAKEKGIHRDELSQQLKIPLEKILDSIRSLEDEGLIYSTIDEFHFKS 270

Query: 361 AA 362
           AA
Sbjct: 361 AA 270

[Close]

BLAST of Cp4.1LG06g04660 vs. TAIR 10
Match: AT2G24490.1 (replicon protein A2 )

HSP 1 Score: 222.2 bits (565), Expect = 6.6e-58
Identity = 138/369 (37.40%), Postives = 191/369 (51.76%), Query Frame = 0


Query: 1   MFSSSQFD-----SGSGFTFSQ-----TNDSSSAKNRDTPGLVPATVKQISEASHSGEEK 60
           MFSSSQF+     SG GF  SQ      + SS+AKNRD  GLVP TVKQI+E   S  EK
Sbjct: 1   MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60

Query: 61  ANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILD 120
           +   ING+ +TNV++VG V +K E                                    
Sbjct: 61  SGLVINGISLTNVSLVGLVCDKDE------------------------------------ 120

Query: 121 GMYIRVNGHLKIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCK 180
                                                    + T++ F +DDGTGRI CK
Sbjct: 121 ----------------------------------------SKVTEVRFTLDDGTGRIDCK 180

Query: 181 RWVNDTFDTKQMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHE 240
           RWV++TFD ++M+ + DG Y+R++GHLK FQ   Q+  FSVRPI +F+E+TFH+IECIH 
Sbjct: 181 RWVSETFDAREMESVRDGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHF 240

Query: 241 HLRNSKLQVLVAGADLIAALLTNLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSVLPSE 300
           + +NS+ Q    G D+  ++ T   G  +T   +  + V +   N  +G           
Sbjct: 241 YSQNSESQRQQVG-DVTQSVNTTFQGGSNTNQATLLNPVVSSQNNDGNG----------- 275

Query: 301 QHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIY 360
                 +KN DD+ILDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIY
Sbjct: 301 ------RKNLDDMILDYLKQPACTARQQGIHIDEIAQQLKIPKNKLEGVVQSLEGDGLIY 275

[Close]

BLAST of Cp4.1LG06g04660 vs. TAIR 10
Match: AT2G24490.2 (replicon protein A2 )

HSP 1 Score: 222.2 bits (565), Expect = 6.6e-58
Identity = 138/369 (37.40%), Postives = 191/369 (51.76%), Query Frame = 0


Query: 1   MFSSSQFD-----SGSGFTFSQ-----TNDSSSAKNRDTPGLVPATVKQISEASHSGEEK 60
           MFSSSQF+     SG GF  SQ      + SS+AKNRD  GLVP TVKQI+E   S  EK
Sbjct: 1   MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60

Query: 61  ANFAINGVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILD 120
           +   ING+ +TNV++VG V +K E                                    
Sbjct: 61  SGLVINGISLTNVSLVGLVCDKDE------------------------------------ 120

Query: 121 GMYIRVNGHLKIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCK 180
                                                    + T++ F +DDGTGRI CK
Sbjct: 121 ----------------------------------------SKVTEVRFTLDDGTGRIDCK 180

Query: 181 RWVNDTFDTKQMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHE 240
           RWV++TFD ++M+ + DG Y+R++GHLK FQ   Q+  FSVRPI +F+E+TFH+IECIH 
Sbjct: 181 RWVSETFDAREMESVRDGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHF 240

Query: 241 HLRNSKLQVLVAGADLIAALLTNLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSVLPSE 300
           + +NS+ Q    G D+  ++ T   G  +T   +  + V +   N  +G           
Sbjct: 241 YSQNSESQRQQVG-DVTQSVNTTFQGGSNTNQATLLNPVVSSQNNDGNG----------- 275

Query: 301 QHTVDVKKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIY 360
                 +KN DD+ILDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIY
Sbjct: 301 ------RKNLDDMILDYLKQPACTARQQGIHIDEIAQQLKIPKNKLEGVVQSLEGDGLIY 275

[Close]

BLAST of Cp4.1LG06g04660 vs. TAIR 10
Match: AT3G02920.1 (Replication protein A, subunit RPA32 )

HSP 1 Score: 152.9 bits (385), Expect = 4.9e-37
Identity = 111/366 (30.33%), Postives = 169/366 (46.17%), Query Frame = 0


Query: 2   FSSSQFDSGSGFTFSQT-----NDSSSAKNRDTPGLVPATVKQISEASHSGEEKANFAIN 61
           F  +   +G GF  SQ        SSS KNRD   L+P T+KQ+S AS +GE  +NF+I+
Sbjct: 6   FDGNAAFAGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSASTTGE--SNFSID 65

Query: 62  GVDITNVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRV 121
           GVDI  V IVG++S    R T + F+VDDGTG      WV+                   
Sbjct: 66  GVDIKTVVIVGRISRMENRITQVDFVVDDGTG------WVD------------------- 125

Query: 122 NGHLKIFQSNKQIFAFSVSYWKKVTIVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDT 181
                                                               C RW +  
Sbjct: 126 ----------------------------------------------------CVRWCHAR 185

Query: 182 FDTKQMDEILDGMYIRVNGHLKIFQSNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSK 241
            +T++M+ +  GMY+R++GHLKIFQ  + +  FSVRP+T+F+EI  HF EC++ H+ N+K
Sbjct: 186 QETEEMEAVKLGMYVRLHGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTK 245

Query: 242 LQVLVAGADLIAALLTNLNGVGSTQFLSSDSIVKTPMQNGSSGYPTASSVLPSEQHTVDV 301
           L+            +T        Q     S + TP +   +G    S+  P++ +  D 
Sbjct: 246 LR---------GGSITQDTATPRPQM--PYSTMPTPAKPYQTG---PSNQFPNQFN--DS 276

Query: 302 KKNCDDLILDYLQLPSSVAKERGIHRDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEF 361
                  +L+YL  P  +  E G+H D ++++L+IP+ ++  ++  L ++G IYST+DE 
Sbjct: 306 MHGVKQTVLNYLNQPMHIVSEAGVHCDIIARELRIPLLQVKEALEQLSNDGCIYSTLDET 276

Query: 362 HFKSAA 363
            FKS A
Sbjct: 366 CFKSTA 276

[Close]

BLAST of Cp4.1LG06g04660 vs. TAIR 10
Match: AT3G02920.2 (Replication protein A, subunit RPA32 )

HSP 1 Score: 152.1 bits (383), Expect = 8.3e-37
Identity = 103/341 (30.21%), Postives = 160/341 (46.92%), Query Frame = 0


Query: 22  SSAKNRDTPGLVPATVKQISEASHSGEEKANFAINGVDITNVTIVGKVSEKAERNTDITF 81
           SS +NRD   L+P T+KQ+S AS +GE  +NF+I+GVDI  V IVG++S    R T + F
Sbjct: 51  SSIRNRDVRTLLPLTLKQLSSASTTGE--SNFSIDGVDIKTVVIVGRISRMENRITQVDF 110

Query: 82  IVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVNGHLKIFQSNKQIFAFSVSYWKKVT 141
           +VDDGTG      WV+                                            
Sbjct: 111 VVDDGTG------WVD-------------------------------------------- 170

Query: 142 IVGKVSEKAERNTDITFIVDDGTGRIGCKRWVNDTFDTKQMDEILDGMYIRVNGHLKIFQ 201
                                      C RW +   +T++M+ +  GMY+R++GHLKIFQ
Sbjct: 171 ---------------------------CVRWCHARQETEEMEAVKLGMYVRLHGHLKIFQ 230

Query: 202 SNKQIFAFSVRPITNFDEITFHFIECIHEHLRNSKLQVLVAGADLIAALLTNLNGVGSTQ 261
             + +  FSVRP+T+F+EI  HF EC++ H+ N+KL+            +T        Q
Sbjct: 231 GKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTKLR---------GGSITQDTATPRPQ 290

Query: 262 FLSSDSIVKTPMQNGSSGYPTASSVLPSEQHTVDVKKNCDDLILDYLQLPSSVAKERGIH 321
                S + TP +   +G    S+  P++ +  D        +L+YL  P  +  E G+H
Sbjct: 291 M--PYSTMPTPAKPYQTG---PSNQFPNQFN--DSMHGVKQTVLNYLNQPMHIVSEAGVH 296

Query: 322 RDELSQQLKIPMEKILNSIRSLEDEGLIYSTIDEFHFKSAA 363
            D ++++L+IP+ ++  ++  L ++G IYST+DE  FKS A
Sbjct: 351 CDIIARELRIPLLQVKEALEQLSNDGCIYSTLDETCFKSTA 296

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g04660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZQ19	9.2e-57	37.40	Replication protein A 32 kDa subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA2A ...	[more]
Q8LFJ8	6.9e-36	30.33	Replication protein A 32 kDa subunit B OS=Arabidopsis thaliana OX=3702 GN=RPA2B ...	[more]
Q6K9U2	4.5e-35	31.34	Replication protein A 32 kDa subunit A OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q6H7J5	3.5e-32	27.76	Replication protein A 32 kDa subunit B OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q5Z8L1	2.0e-19	44.55	Replication protein A 32 kDa subunit C OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of Cp4.1LG06g04660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023535200.1	1.61e-172	74.86	replication protein A 32 kDa subunit A-like [Cucurbita pepo subsp. pepo]	[more]
XP_022936562.1	4.87e-167	73.20	replication protein A 32 kDa subunit A-like [Cucurbita moschata]	[more]
XP_022976184.1	7.44e-167	73.35	replication protein A 32 kDa subunit A-like [Cucurbita maxima]	[more]
KAG7024504.1	1.98e-166	73.20	Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosper...	[more]
KAG6591621.1	2.81e-166	72.93	Replication protein A 32 kDa subunit A, partial [Cucurbita argyrosperma subsp. s...	[more]

BLAST of Cp4.1LG06g04660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F8S8	2.36e-167	73.20	replication protein A 32 kDa subunit A-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1IMU1	3.60e-167	73.35	replication protein A 32 kDa subunit A-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A1S3CR64	3.87e-152	66.30	replication protein A 32 kDa subunit A-like OS=Cucumis melo OX=3656 GN=LOC103503...	[more]
A0A0A0LEG7	1.82e-150	65.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881710 PE=3 SV=1	[more]
A0A6J1CUB8	5.76e-142	64.36	replication protein A 32 kDa subunit A OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Cp4.1LG06g04660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24490.1	6.6e-58	37.40	replicon protein A2	[more]
AT2G24490.2	6.6e-58	37.40	replicon protein A2	[more]
AT3G02920.1	4.9e-37	30.33	Replication protein A, subunit RPA32	[more]
AT3G02920.2	8.3e-37	30.21	Replication protein A, subunit RPA32	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004365	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	PFAM	PF01336	tRNA_anti-codon	coord: 140..213 e-value: 7.3E-9 score: 35.5 coord: 63..133 e-value: 2.0E-8 score: 34.1
None	No IPR available	GENE3D	2.40.50.140		coord: 29..136 e-value: 4.2E-28 score: 99.6 coord: 137..237 e-value: 1.4E-30 score: 107.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR13989:SF34	REPLICATION PROTEIN A 32 KDA SUBUNIT A	coord: 1..134 coord: 139..361
None	No IPR available	CDD	cd04478	RPA2_DBD_D	coord: 140..232 e-value: 3.14263E-37 score: 127.716
IPR014892	Replication protein A, C-terminal	PFAM	PF08784	RPA_C	coord: 269..355 e-value: 2.9E-13 score: 50.4
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 295..362 e-value: 6.2E-16 score: 59.8
IPR040260	Replication factor A protein-like	PANTHER	PTHR13989	REPLICATION PROTEIN A-RELATED	coord: 1..134 coord: 139..361
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 139..235
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 32..134
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 297..360

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g04660.1	Cp4.1LG06g04660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006260	DNA replication
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006289	nucleotide-excision repair
cellular_component	GO:0000781	chromosome, telomeric region
cellular_component	GO:0005662	DNA replication factor A complex
cellular_component	GO:0035861	site of double-strand break
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003676	nucleic acid binding