Cp4.1LG06g03980 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGCAAGACCTTTTGATCGGGAATTCTTCGCCGTCCGATTGGGATGTTTCCGGCGGTAGTTTGTTCTGTAATTTCACCGGCGTTACCTGTAATGAAAAGGGGTTTGTGGTTGGGATTGATCTCTCCGGCAGGGAGGTTTCTGGGAAGTTTCCGGCGGATGTGTGTACTTATTTGCCGGAGTTGAGAGTGTTGCGACTTGGGCAGAGTGGCTTACGAGGGACGTTTCCACGTGGGATAACGAATTGCTCTGTTTTGGAGGAATTGGATATGAGTTTTCTGTCTATGACTGGGACGTTACCGGATTTCTCGCCGTTGAGAAACCTTAGGATTCTCGACATGTCGTATAACAACTTCACCGGCGACTTTCCGTTGTCGGTTTTTAGTTTGACGAAGCTCGAGAGGCTGAATTTCAACGAGGATAATAATTTCAATATGTGGCAGTTGCCGGAGGATTTGTCGGAGTTGACGAAGATGAAATCGATGGTGTTGACGACTTGTATGTTGGGGGGGAGAATTCCGGCGACGATTGGGAATATGACGGCGCTCGTTGACTTGGAATTAAGCGGCAACTTCCTCGCCGGAGAAATTCCGAAAGAAATCGGGAATTTGAAGAATTTGAGACAGTTGGAGCTTTATTACAATTCATTAATCGGGGAAATTCCAGAGGAGATCGGGAATTTAACAGAACTCGTGGACTTGGACATGTCGGTCAACATGTTGACTGGGAAGCTTCCTGAGTCGATTTGTCGTCTTCCTAAGCTTGAAGTTCTTCAGCTTTACAACAACTCGTTAACAGGGGAGATTCCCATTTCAATTTCGAATTCAACAACGCTCACTATGTTATCCCTTTACGACAACTACATGACCGGAGAAGTTCCAAGTAATTTGGGACAATTTTCACCCATGTTGGTTCTCGACTTGTCGGAAAATCATTTCTCCGGTCCCTTACCGACAGATGTCTGTAGAGAAGGTAAATTAATGTATTTTCTCATGTTGCAAAATAAATTTTCCGGTCAAATCCCGCCGGCGTATGGTAAATGCCAGTCACTTTTACGGTTTCGAGTCAGCTGGAATTTTCTAGAAGGTCCGGTGCCGGCGGGACTTTTGGGTCTTCCACATGCTTCGATTATTGATTTTGCTAACAATAATCTTAGCGGTGAAATTCCGAATTCTTTTGCTGAAGCCAGGAATCTGTCGGAATTGTTCATGCAGAGTAACATGATTTCCGGCGAGTTGCCGCCGGAAATCTCAAAAGCGACCAATTTGGTTAAGATTGATCTTAGCAACAACTTCTTGTCTGGTCCGATTCCTTCTGAAATTGGGAATCTCAAGAGGCTTAATTTGCTGCTTTTGCAACGAAATCACCTGAATTCTTCAATACCCACTTCGCTTTCCGAGATTAAATCTCTTAATGTTCTTGATTTATCCGACAATCGACTGTCCGGTAACATCCCGGAAAGCCTCTGTGAATTGTTGCCGAACTCAATCAATTTCTCAAACAACCAACTCTCCGGTCCGATTCCTCTGTCTTTGATCAAATATGGGTTAGTGGAGAGCTTTTCCGGCAACCCAGGATTGTGCGTTTCGATTTATTTAGATTCATCCGACCAAAAATTCCCAGTTTGTTCTCAAAATCTCAACAAAAAACGGCTGAATTCCATCTGGACAATCGGAGTATCAGCGTTCATAATCTTCATCGGAGCTGCTCTGTATCTCCGACGACGATTCAGCCGAGAAAAAACAGAAATGGAACAGGACGAGACACAATCTTCATCGTTTTTCTCATACGATGTCAAAAGCTTCCACCGAATCAGCTTCGACCCAAGAGAGATAATCGAATCAATGGTGGAGAAGAACATCGTCGGCCATGGCGGCGCCGGTACAGTGTACAAAATTGAGCTAAGCAGCGGCGAAATCGTCGCCGTTAAAAGGCCGTGGAGACGAAAGGGGAAAGACCGACGGTCGGATCAGGAGCAGCTGTTCTTGGACAAAGAGCTGAAAACAGAAGTGGAGACATTGGGGAGTATAAGGCATAAGAACATCGTGAAATTATACTGTCATTTCTCGAGCTTGGACTGCAGCCTTTTGGTGTATGAGTACCTGCCCAACGGCAATTTATGGGACGCCCTGCACAAGGGTTGGGTTCATTTGGACTGGCCGACACGGCACCAGATTGCGTTGGGCATAGCGCAGGGCTTGGCTTACCTTCATCATGATCTCTCGCCTTCTATAATTCATAGAGACATTAAAACCACTAATATACTGTTGGATGTTCATTATCAGCCTAAAGTTGCTGATTTTGGCATTGCTAAAGTCTTGCAAGCTCGAGCTGGTAAGGACTCGACCACCACCGTCATCGCCGGTACTTACGGCTATCTCGCCCCGGGTATGTCCTAAACTTTTAAACATTTCAAAATGGTATAGCGTCTTGTGTGTTAACTAATGATTTTAATCTGAAACAGAATATGCATATTCATCGAAAGCCACGACGAAGTGCGATGTGTATAGCTTTGGAATTGTGTTGATGGAGCTGATAACGGGGAAGAAGCCGGTGGAGGCGGAGTTCGGAGAGAACAAGAATATTATATATTGGGTTTCGAATAAAGTAGACACGAAGGAAGGAGCTGTAGAAGTTTTGGACAAGAAAGTTTCGTTATCGTTTAAAGACGAGATGATTCAAGTTCTAAAGATTGCTATTCGGTGCACATACAAGAATCCTGCACTTAGACCCACCATGAAGGATGTGGTACACTTGTTGATTGAAACCGACCCTTGCAAACTCGATTCTCACAACAAATGCCCTAAACACACTACCACCACCACGAGGATCAAGAACTCATTTGACCTATGA ATGATGCAAGACCTTTTGATCGGGAATTCTTCGCCGTCCGATTGGGATGTTTCCGGCGGTAGTTTGTTCTGTAATTTCACCGGCGTTACCTGTAATGAAAAGGGGTTTGTGGTTGGGATTGATCTCTCCGGCAGGGAGGTTTCTGGGAAGTTTCCGGCGGATGTGTGTACTTATTTGCCGGAGTTGAGAGTGTTGCGACTTGGGCAGAGTGGCTTACGAGGGACGTTTCCACAATATGCATATTCATCGAAAGCCACGACGAAGTGCGATGTGTATAGCTTTGGAATTGTGTTGATGGAGCTGATAACGGGGAAGAAGCCGGTGGAGGCGGAGTTCGGAGAGAACAAGAATATTATATATTGGGTTTCGAATAAAGTAGACACGAAGGAAGGAGCTGTAGAAGTTTTGGACAAGAAAGTTTCGTTATCGTTTAAAGACGAGATGATTCAAGTTCTAAAGATTGCTATTCGGTGCACATACAAGAATCCTGCACTTAGACCCACCATGAAGGATGTGGTACACTTGTTGATTGAAACCGACCCTTGCAAACTCGATTCTCACAACAAATGCCCTAAACACACTACCACCACCACGAGGATCAAGAACTCATTTGACCTATGA ATGATGCAAGACCTTTTGATCGGGAATTCTTCGCCGTCCGATTGGGATGTTTCCGGCGGTAGTTTGTTCTGTAATTTCACCGGCGTTACCTGTAATGAAAAGGGGTTTGTGGTTGGGATTGATCTCTCCGGCAGGGAGGTTTCTGGGAAGTTTCCGGCGGATGTGTGTACTTATTTGCCGGAGTTGAGAGTGTTGCGACTTGGGCAGAGTGGCTTACGAGGGACGTTTCCACAATATGCATATTCATCGAAAGCCACGACGAAGTGCGATGTGTATAGCTTTGGAATTGTGTTGATGGAGCTGATAACGGGGAAGAAGCCGGTGGAGGCGGAGTTCGGAGAGAACAAGAATATTATATATTGGGTTTCGAATAAAGTAGACACGAAGGAAGGAGCTGTAGAAGTTTTGGACAAGAAAGTTTCGTTATCGTTTAAAGACGAGATGATTCAAGTTCTAAAGATTGCTATTCGGTGCACATACAAGAATCCTGCACTTAGACCCACCATGAAGGATGTGGTACACTTGTTGATTGAAACCGACCCTTGCAAACTCGATTCTCACAACAAATGCCCTAAACACACTACCACCACCACGAGGATCAAGAACTCATTTGACCTATGA MMQDLLIGNSSPSDWDVSGGSLFCNFTGVTCNEKGFVVGIDLSGREVSGKFPADVCTYLPELRVLRLGQSGLRGTFPQYAYSSKATTKCDVYSFGIVLMELITGKKPVEAEFGENKNIIYWVSNKVDTKEGAVEVLDKKVSLSFKDEMIQVLKIAIRCTYKNPALRPTMKDVVHLLIETDPCKLDSHNKCPKHTTTTTRIKNSFDL Homology
BLAST of Cp4.1LG06g03980 vs. ExPASy Swiss-Prot
Match: Q9FGL5 (Receptor protein-tyrosine kinase CEPR1 OS=Arabidopsis thaliana OX=3702 GN=CEPR1 PE=1 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.3e-36 Identity = 77/127 (60.63%), Postives = 95/127 (74.80%), Query Frame = 0
HSP 2 Score: 70.1 bits (170), Expect = 3.3e-11 Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. ExPASy Swiss-Prot
Match: F4I2N7 (Receptor-like protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=RLK7 PE=1 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 3.4e-32 Identity = 58/107 (54.21%), Postives = 87/107 (81.31%), Query Frame = 0
HSP 2 Score: 57.4 bits (137), Expect = 2.2e-07 Identity = 28/63 (44.44%), Postives = 35/63 (55.56%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. ExPASy Swiss-Prot
Match: Q9LJM4 (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana OX=3702 GN=IKU2 PE=1 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 3.8e-23 Identity = 53/115 (46.09%), Postives = 80/115 (69.57%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. ExPASy Swiss-Prot
Match: Q9FII5 (Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22 Identity = 51/108 (47.22%), Postives = 76/108 (70.37%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. ExPASy Swiss-Prot
Match: Q9C7T7 (Receptor protein-tyrosine kinase CEPR2 OS=Arabidopsis thaliana OX=3702 GN=CEPR2 PE=1 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 3.2e-22 Identity = 57/120 (47.50%), Postives = 83/120 (69.17%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. NCBI nr
Match: KAG6591717.1 (Receptor protein-tyrosine kinase CEPR1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 265 bits (678), Expect = 2.68e-81 Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. NCBI nr
Match: XP_022937418.1 (receptor protein-tyrosine kinase CEPR1-like [Cucurbita moschata]) HSP 1 Score: 265 bits (678), Expect = 2.21e-79 Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. NCBI nr
Match: XP_023536406.1 (receptor protein-tyrosine kinase CEPR1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 265 bits (678), Expect = 2.21e-79 Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. NCBI nr
Match: KAG7024598.1 (Receptor protein-tyrosine kinase CEPR1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 265 bits (678), Expect = 2.21e-79 Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. NCBI nr
Match: XP_022977158.1 (receptor protein-tyrosine kinase CEPR1-like [Cucurbita maxima]) HSP 1 Score: 260 bits (665), Expect = 2.99e-77 Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. ExPASy TrEMBL
Match: A0A6J1FG03 (receptor protein-tyrosine kinase CEPR1-like OS=Cucurbita moschata OX=3662 GN=LOC111443715 PE=4 SV=1) HSP 1 Score: 265 bits (678), Expect = 1.07e-79 Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. ExPASy TrEMBL
Match: A0A6J1IP71 (receptor protein-tyrosine kinase CEPR1-like OS=Cucurbita maxima OX=3661 GN=LOC111477315 PE=3 SV=1) HSP 1 Score: 260 bits (665), Expect = 1.45e-77 Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. ExPASy TrEMBL
Match: A0A5D3E606 (Receptor-like protein kinase HSL1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005260 PE=4 SV=1) HSP 1 Score: 231 bits (588), Expect = 6.40e-67 Identity = 113/130 (86.92%), Postives = 120/130 (92.31%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. ExPASy TrEMBL
Match: A0A0A0LHS0 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G893960 PE=4 SV=1) HSP 1 Score: 231 bits (588), Expect = 6.40e-67 Identity = 113/130 (86.92%), Postives = 120/130 (92.31%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. ExPASy TrEMBL
Match: A0A1S3CQF5 (LOW QUALITY PROTEIN: receptor-like protein kinase HSL1 OS=Cucumis melo OX=3656 GN=LOC103503625 PE=4 SV=1) HSP 1 Score: 231 bits (588), Expect = 6.40e-67 Identity = 113/130 (86.92%), Postives = 120/130 (92.31%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. TAIR 10
Match: AT5G49660.1 (Leucine-rich repeat transmembrane protein kinase family protein ) HSP 1 Score: 154.5 bits (389), Expect = 9.6e-38 Identity = 77/127 (60.63%), Postives = 95/127 (74.80%), Query Frame = 0
HSP 2 Score: 70.1 bits (170), Expect = 2.4e-12 Identity = 35/73 (47.95%), Postives = 49/73 (67.12%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. TAIR 10
Match: AT1G09970.1 (Leucine-rich receptor-like protein kinase family protein ) HSP 1 Score: 142.5 bits (358), Expect = 3.8e-34 Identity = 59/108 (54.63%), Postives = 88/108 (81.48%), Query Frame = 0
HSP 2 Score: 57.4 bits (137), Expect = 1.6e-08 Identity = 28/63 (44.44%), Postives = 35/63 (55.56%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. TAIR 10
Match: AT1G09970.2 (Leucine-rich receptor-like protein kinase family protein ) HSP 1 Score: 139.8 bits (351), Expect = 2.4e-33 Identity = 58/107 (54.21%), Postives = 87/107 (81.31%), Query Frame = 0
HSP 2 Score: 57.4 bits (137), Expect = 1.6e-08 Identity = 28/63 (44.44%), Postives = 35/63 (55.56%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. TAIR 10
Match: AT3G19700.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 109.8 bits (273), Expect = 2.7e-24 Identity = 53/115 (46.09%), Postives = 80/115 (69.57%), Query Frame = 0
BLAST of Cp4.1LG06g03980 vs. TAIR 10
Match: AT5G61480.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 108.2 bits (269), Expect = 7.9e-24 Identity = 51/108 (47.22%), Postives = 76/108 (70.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|